Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307640 | PNX76188.1 | 80.186 | 429 | 18 | 4 | 1 | 364 | 1 | 427 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307640 | sp|Q96255|SERB1_ARATH | 67.700 | 387 | 60 | 5 | 42 | 364 | 45 | 430 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307640 | A0A2K3LCD1 | 80.186 | 429 | 18 | 4 | 1 | 364 | 1 | 427 | 0.0 | 674 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0719270 | Msa1307640 | 0.804463 | 2.134065e-49 | -8.615850e-47 |
| Msa0773960 | Msa1307640 | 0.811665 | 6.250426e-51 | -8.615850e-47 |
| Msa0799450 | Msa1307640 | 0.802513 | 5.413612e-49 | -8.615850e-47 |
| Msa0837710 | Msa1307640 | 0.804169 | 2.457396e-49 | -8.615850e-47 |
| Msa0840520 | Msa1307640 | 0.814001 | 1.924484e-51 | -8.615850e-47 |
| Msa1307100 | Msa1307640 | 0.890617 | 8.375856e-74 | -8.615850e-47 |
| Msa1307640 | Msa1436620 | 0.812463 | 4.187425e-51 | -8.615850e-47 |
| Msa0436100 | Msa1307640 | 0.818210 | 2.207597e-52 | -8.615850e-47 |
| Msa0467170 | Msa1307640 | 0.803744 | 3.011563e-49 | -8.615850e-47 |
| Msa0467330 | Msa1307640 | 0.806989 | 6.292897e-50 | -8.615850e-47 |
| Msa0290800 | Msa1307640 | 0.803884 | 2.817052e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307640 | MtrunA17_Chr8g0370681 | 79.907 | 428 | 22 | 3 | 1 | 364 | 1 | 428 | 0.0 | 669 |
| Msa1307640 | MtrunA17_Chr4g0018711 | 80.556 | 36 | 7 | 0 | 273 | 308 | 14 | 49 | 4.54e-12 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307640 | AT4G35630.1 | 67.700 | 387 | 60 | 5 | 42 | 364 | 45 | 430 | 0.0 | 534 |
| Msa1307640 | AT2G17630.1 | 64.899 | 396 | 67 | 4 | 32 | 364 | 36 | 422 | 0.0 | 519 |
Find 101 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGAATGGGTTTGGGTTT+GGG | 0.145925 | 8_4:-3497793 | None:intergenic |
| GAGGAAAGGGTTGTTGGTTT+GGG | 0.154238 | 8_4:-3497664 | None:intergenic |
| TTGGGGCTGGGCTTGGGTTT+GGG | 0.177337 | 8_4:-3497775 | None:intergenic |
| TTTGGGTTTGGGGCTGGGCT+TGG | 0.187617 | 8_4:-3497782 | None:intergenic |
| CTGAGGAATGGGTTTGGGTT+TGG | 0.201319 | 8_4:-3497794 | None:intergenic |
| AATGGGTTTGGGTTTGGGGC+TGG | 0.205539 | 8_4:-3497788 | None:intergenic |
| TTTGGGGCTGGGCTTGGGTT+TGG | 0.206468 | 8_4:-3497776 | None:intergenic |
| ATGGGTTTGGGTTTGGGGCT+GGG | 0.207238 | 8_4:-3497787 | None:intergenic |
| TGAGGAAAGGGTTGTTGGTT+TGG | 0.212992 | 8_4:-3497665 | None:intergenic |
| TGTTGGTTTGGGGCAGGAGA+TGG | 0.264416 | 8_4:-3497653 | None:intergenic |
| TTGGGTTTGGGGCTGGGCTT+GGG | 0.266124 | 8_4:-3497781 | None:intergenic |
| CTGGGCTTGGGTTTGGGTGG+TGG | 0.289144 | 8_4:-3497769 | None:intergenic |
| GTTGGAAGGTGAGTTTATTA+AGG | 0.298436 | 8_4:+3498737 | Msa1307640:CDS |
| TGAAGGTGGGGTTGGTGCGG+AGG | 0.301133 | 8_4:-3497722 | None:intergenic |
| ATTGTAAACCAAACGTGATT+TGG | 0.312678 | 8_4:+3498149 | Msa1307640:CDS |
| GTTGGTTTGGGGCAGGAGAT+GGG | 0.319241 | 8_4:-3497652 | None:intergenic |
| GGCTTGGGTTTGGGTGGTGG+CGG | 0.345622 | 8_4:-3497766 | None:intergenic |
| GGAGAATATGGTTCAGCTTA+AGG | 0.351474 | 8_4:+3498770 | Msa1307640:CDS |
| CGCGATCTGAGGAATGGGTT+TGG | 0.365463 | 8_4:-3497800 | None:intergenic |
| GGGCTGGGCTTGGGTTTGGG+TGG | 0.366318 | 8_4:-3497772 | None:intergenic |
| TGGGGCAGGAGATGGGTTTG+TGG | 0.371603 | 8_4:-3497645 | None:intergenic |
| TGTTGAGGTGAGTGGGGTGA+TGG | 0.372187 | 8_4:-3497694 | None:intergenic |
| GGACGCTGCTAAGGAGAATA+TGG | 0.373173 | 8_4:+3498758 | Msa1307640:CDS |
| GCGATCTGAGGAATGGGTTT+GGG | 0.375565 | 8_4:-3497799 | None:intergenic |
| GGCGGAGCATTTGATTGAAA+TGG | 0.393103 | 8_4:-3497748 | None:intergenic |
| AAACCAAACGTGATTTGGTC+TGG | 0.403318 | 8_4:+3498154 | Msa1307640:CDS |
| GAGGAATGGGTTTGGGTTTG+GGG | 0.407017 | 8_4:-3497792 | None:intergenic |
| CTCTACAACTGGCGTGGATC+CGG | 0.407304 | 8_4:+3497888 | Msa1307640:CDS |
| ATGCTATTGATGAGAGTAAT+GGG | 0.409801 | 8_4:+3498643 | Msa1307640:CDS |
| GTTTGAAGGTGGGGTTGGTG+CGG | 0.410251 | 8_4:-3497725 | None:intergenic |
| TTCCCAGACCAAATCACGTT+TGG | 0.411453 | 8_4:-3498157 | None:intergenic |
| AATGGGTTTGAAGGTGGGGT+TGG | 0.412650 | 8_4:-3497730 | None:intergenic |
| GTTGAGGTGAGTGGGGTGAT+GGG | 0.416864 | 8_4:-3497693 | None:intergenic |
| GACCTAACAGATTTCTCAAC+AGG | 0.417645 | 8_4:-3498678 | None:intergenic |
| CAGGAGATGGGTTTGTGGTG+AGG | 0.418564 | 8_4:-3497640 | None:intergenic |
| GAGAATATGGTTCAGCTTAA+GGG | 0.419573 | 8_4:+3498771 | Msa1307640:CDS |
| GCTGTTGATTACATCGTTAC+CGG | 0.422181 | 8_4:+3498088 | Msa1307640:CDS |
| CGCGTCTTCAACTTCGCCGC+TGG | 0.423193 | 8_4:+3497819 | Msa1307640:CDS |
| TACAATGCTATGCCTTTAGC+TGG | 0.423970 | 8_4:+3498828 | Msa1307640:CDS |
| TGTGCTAATGAAACAATTCA+TGG | 0.434491 | 8_4:+3498253 | Msa1307640:CDS |
| GGGAGATTGTTGAGGTGAGT+GGG | 0.434637 | 8_4:-3497701 | None:intergenic |
| ATTACATCGTTACCGGTTCG+TGG | 0.435789 | 8_4:+3498095 | Msa1307640:CDS |
| AAGGGTTGTTGGTTTGGGGC+AGG | 0.436660 | 8_4:-3497659 | None:intergenic |
| TGGGATTTACATGTGTGGTT+TGG | 0.438222 | 8_4:+3498542 | Msa1307640:CDS |
| GCGGAGCATTTGATTGAAAT+GGG | 0.439705 | 8_4:-3497747 | None:intergenic |
| CAGAAGAATGTGGGTCCCTC+TGG | 0.442407 | 8_4:+3498399 | Msa1307640:intron |
| CACTTTGGAGAAATCTGAGT+TGG | 0.443629 | 8_4:+3498719 | Msa1307640:CDS |
| TGTTTCAATTCATCAAAAGA+TGG | 0.444164 | 8_4:-3498202 | None:intergenic |
| AGGGAGATTGTTGAGGTGAG+TGG | 0.449206 | 8_4:-3497702 | None:intergenic |
| AGCTTTATCACTCCACGAAC+CGG | 0.456226 | 8_4:-3498107 | None:intergenic |
| GATGAATGTTCCTTTCACTT+TGG | 0.460026 | 8_4:+3498704 | Msa1307640:CDS |
| ATTGTGAGAAATGATTTGAT+TGG | 0.460613 | 8_4:+3498435 | Msa1307640:CDS |
| AGAGCTCTGATTGGGCTTTG+AGG | 0.461704 | 8_4:-3497869 | None:intergenic |
| TTTGTTGGAACAAGGTGGTT+TGG | 0.474962 | 8_4:+3498575 | Msa1307640:CDS |
| TTTGATTGAAATGGGTTTGA+AGG | 0.475248 | 8_4:-3497739 | None:intergenic |
| AGGAAAGGGTTGTTGGTTTG+GGG | 0.479387 | 8_4:-3497663 | None:intergenic |
| TTTAGCTGGTGTTGAGAAGT+TGG | 0.479452 | 8_4:+3498842 | Msa1307640:CDS |
| AGCTGGTGTTGAGAAGTTGG+TGG | 0.486689 | 8_4:+3498845 | Msa1307640:CDS |
| CCCAATCAGAGCTCTACAAC+TGG | 0.489103 | 8_4:+3497877 | Msa1307640:CDS |
| CTTAAGGGTCATAGGTCTGT+TGG | 0.490369 | 8_4:+3498786 | Msa1307640:CDS |
| GAAGGTGGGGTTGGTGCGGA+GGG | 0.492410 | 8_4:-3497721 | None:intergenic |
| GCCAGTTGTAGAGCTCTGAT+TGG | 0.492459 | 8_4:-3497878 | None:intergenic |
| CCAGTTGTAGAGCTCTGATT+GGG | 0.496920 | 8_4:-3497877 | None:intergenic |
| TGGTTCAGCTTAAGGGTCAT+AGG | 0.502181 | 8_4:+3498778 | Msa1307640:CDS |
| AACCAAACGTGATTTGGTCT+GGG | 0.503653 | 8_4:+3498155 | Msa1307640:CDS |
| GAAGACGCGATCTGAGGAAT+GGG | 0.509265 | 8_4:-3497805 | None:intergenic |
| TGAAACAGAACCCAGAAGCT+AGG | 0.510655 | 8_4:+3498218 | Msa1307640:CDS |
| GATTGAAATGGGTTTGAAGG+TGG | 0.515376 | 8_4:-3497736 | None:intergenic |
| AGGGAGGGTGGCGGGTCCAG+CGG | 0.519387 | 8_4:-3497835 | None:intergenic |
| ATTGAAATGGGTTTGAAGGT+GGG | 0.520166 | 8_4:-3497735 | None:intergenic |
| GGAGATTGTTGAGGTGAGTG+GGG | 0.521323 | 8_4:-3497700 | None:intergenic |
| TGAAGACGCGATCTGAGGAA+TGG | 0.523874 | 8_4:-3497806 | None:intergenic |
| TTGAAATGGGTTTGAAGGTG+GGG | 0.530589 | 8_4:-3497734 | None:intergenic |
| TTTGAGGATTTGTTGGAACA+AGG | 0.531277 | 8_4:+3498567 | Msa1307640:CDS |
| GTTTATTAAGGACGCTGCTA+AGG | 0.539210 | 8_4:+3498749 | Msa1307640:CDS |
| ATCTTGTAATCAAGCATCAC+AGG | 0.547044 | 8_4:-3498477 | None:intergenic |
| AAGGGTCATAGGTCTGTTGG+TGG | 0.549936 | 8_4:+3498789 | Msa1307640:CDS |
| AACTTCTCAACACCAGCTAA+AGG | 0.551100 | 8_4:-3498840 | None:intergenic |
| AATGCTATTGATGAGAGTAA+TGG | 0.555480 | 8_4:+3498642 | Msa1307640:CDS |
| GGTGCGGAGGGAGATTGTTG+AGG | 0.560350 | 8_4:-3497709 | None:intergenic |
| CACATGTAAATCCCATAACA+AGG | 0.564444 | 8_4:-3498534 | None:intergenic |
| CATCTCCATGACGCTCATAC+CGG | 0.565793 | 8_4:-3497907 | None:intergenic |
| GTCCTGTTGAGAAATCTGTT+AGG | 0.570441 | 8_4:+3498676 | Msa1307640:CDS |
| TCAGATTTCTCCAAAGTGAA+AGG | 0.572475 | 8_4:-3498714 | None:intergenic |
| GGTTGTCATTGATGTTGCCA+TGG | 0.574103 | 8_4:-3497619 | None:intergenic |
| GAAGTTGAAGACGCGATCTG+AGG | 0.578236 | 8_4:-3497811 | None:intergenic |
| ATCACAATTGTTACACCAGA+GGG | 0.581256 | 8_4:-3498414 | None:intergenic |
| TGCAGATATTCAACGGCACG+CGG | 0.584333 | 8_4:-3498054 | None:intergenic |
| AGTGATAAAGCTGTGAAAGA+AGG | 0.588960 | 8_4:+3498118 | Msa1307640:CDS |
| TTGGAGAAATCTGAGTTGGA+AGG | 0.593451 | 8_4:+3498723 | Msa1307640:CDS |
| TGCTGGTGCTCAGAAGAATG+TGG | 0.593460 | 8_4:+3498389 | Msa1307640:intron |
| TGTTATGGGATTTACATGTG+TGG | 0.603778 | 8_4:+3498537 | Msa1307640:CDS |
| GCTCTGATTGGGCTTTGAGG+AGG | 0.605568 | 8_4:-3497866 | None:intergenic |
| TCAGAGCTCTACAACTGGCG+TGG | 0.615515 | 8_4:+3497882 | Msa1307640:CDS |
| GAGGATTTGTTGGAACAAGG+TGG | 0.621045 | 8_4:+3498570 | Msa1307640:CDS |
| GCTGGTGCTCAGAAGAATGT+GGG | 0.653676 | 8_4:+3498390 | Msa1307640:intron |
| CATGTAAATCCCATAACAAG+GGG | 0.656059 | 8_4:-3498532 | None:intergenic |
| ACATGTAAATCCCATAACAA+GGG | 0.669416 | 8_4:-3498533 | None:intergenic |
| AATCACAATTGTTACACCAG+AGG | 0.695723 | 8_4:-3498415 | None:intergenic |
| GTCATGGAGATGAGTCACAG+AGG | 0.791298 | 8_4:+3497918 | Msa1307640:CDS |
| ATGTAAATCCCATAACAAGG+GGG | 0.794835 | 8_4:-3498531 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCCCATTTTTATTACT+GGG | - | chr8_4:3498304-3498323 | None:intergenic | 20.0% |
| !!! | AAAATCCCATTTTTATTACT+GGG | - | chr8_4:3498304-3498323 | None:intergenic | 20.0% |
| ! | TGTTTCAATTCATCAAAAGA+TGG | - | chr8_4:3498205-3498224 | None:intergenic | 25.0% |
| !!! | CAAAATCCCATTTTTATTAC+TGG | - | chr8_4:3498305-3498324 | None:intergenic | 25.0% |
| !! | CAGTAATAAAAATGGGATTT+TGG | + | chr8_4:3498303-3498322 | Msa1307640:CDS | 25.0% |
| ! | ATTGTGAGAAATGATTTGAT+TGG | + | chr8_4:3498435-3498454 | Msa1307640:CDS | 25.0% |
| ! | TGTTTCAATTCATCAAAAGA+TGG | - | chr8_4:3498205-3498224 | None:intergenic | 25.0% |
| !!! | CAAAATCCCATTTTTATTAC+TGG | - | chr8_4:3498305-3498324 | None:intergenic | 25.0% |
| !! | CAGTAATAAAAATGGGATTT+TGG | + | chr8_4:3498303-3498322 | Msa1307640:CDS | 25.0% |
| ! | ATTGTGAGAAATGATTTGAT+TGG | + | chr8_4:3498435-3498454 | Msa1307640:CDS | 25.0% |
| ! | TTTGATTGAAATGGGTTTGA+AGG | - | chr8_4:3497742-3497761 | None:intergenic | 30.0% |
| ! | TGATTCAGCTTTTTGGATAA+TGG | - | chr8_4:3497958-3497977 | None:intergenic | 30.0% |
| ! | TATTCCGTTCTTTTTCTTCA+AGG | + | chr8_4:3498011-3498030 | Msa1307640:intron | 30.0% |
| !! | TCGTTTTTGCAGATATTCAA+CGG | - | chr8_4:3498064-3498083 | None:intergenic | 30.0% |
| ATTGTAAACCAAACGTGATT+TGG | + | chr8_4:3498149-3498168 | Msa1307640:CDS | 30.0% | |
| TGTGCTAATGAAACAATTCA+TGG | + | chr8_4:3498253-3498272 | Msa1307640:CDS | 30.0% | |
| CAACACCCAGTAATAAAAAT+GGG | + | chr8_4:3498296-3498315 | Msa1307640:CDS | 30.0% | |
| !! | AAATTTGGTTTGATCTATGC+TGG | + | chr8_4:3498372-3498391 | Msa1307640:intron | 30.0% |
| ACATGTAAATCCCATAACAA+GGG | - | chr8_4:3498536-3498555 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTGAGGATTTGT+TGG | + | chr8_4:3498560-3498579 | Msa1307640:CDS | 30.0% |
| AATGCTATTGATGAGAGTAA+TGG | + | chr8_4:3498642-3498661 | Msa1307640:CDS | 30.0% | |
| ATGCTATTGATGAGAGTAAT+GGG | + | chr8_4:3498643-3498662 | Msa1307640:CDS | 30.0% | |
| ! | TTTGATTGAAATGGGTTTGA+AGG | - | chr8_4:3497742-3497761 | None:intergenic | 30.0% |
| ! | TGATTCAGCTTTTTGGATAA+TGG | - | chr8_4:3497958-3497977 | None:intergenic | 30.0% |
| ! | TATTCCGTTCTTTTTCTTCA+AGG | + | chr8_4:3498011-3498030 | Msa1307640:intron | 30.0% |
| !! | TCGTTTTTGCAGATATTCAA+CGG | - | chr8_4:3498064-3498083 | None:intergenic | 30.0% |
| ATTGTAAACCAAACGTGATT+TGG | + | chr8_4:3498149-3498168 | Msa1307640:CDS | 30.0% | |
| TGTGCTAATGAAACAATTCA+TGG | + | chr8_4:3498253-3498272 | Msa1307640:CDS | 30.0% | |
| CAACACCCAGTAATAAAAAT+GGG | + | chr8_4:3498296-3498315 | Msa1307640:CDS | 30.0% | |
| !! | AAATTTGGTTTGATCTATGC+TGG | + | chr8_4:3498372-3498391 | Msa1307640:intron | 30.0% |
| ACATGTAAATCCCATAACAA+GGG | - | chr8_4:3498536-3498555 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTGAGGATTTGT+TGG | + | chr8_4:3498560-3498579 | Msa1307640:CDS | 30.0% |
| AATGCTATTGATGAGAGTAA+TGG | + | chr8_4:3498642-3498661 | Msa1307640:CDS | 30.0% | |
| ATGCTATTGATGAGAGTAAT+GGG | + | chr8_4:3498643-3498662 | Msa1307640:CDS | 30.0% | |
| !!! | TTTTTTGAGGAAAGGGTTGT+TGG | - | chr8_4:3497673-3497692 | None:intergenic | 35.0% |
| !!! | TGATGGGTTTTTTGAGGAAA+GGG | - | chr8_4:3497680-3497699 | None:intergenic | 35.0% |
| ! | ATTGAAATGGGTTTGAAGGT+GGG | - | chr8_4:3497738-3497757 | None:intergenic | 35.0% |
| ! | TACCCTTTTGAATATCTCCT+CGG | + | chr8_4:3497986-3498005 | Msa1307640:intron | 35.0% |
| TTCCGAGGAGATATTCAAAA+GGG | - | chr8_4:3497991-3498010 | None:intergenic | 35.0% | |
| ATTCCGAGGAGATATTCAAA+AGG | - | chr8_4:3497992-3498011 | None:intergenic | 35.0% | |
| AAAAAGAACGGAATATTCCG+AGG | - | chr8_4:3498006-3498025 | None:intergenic | 35.0% | |
| AGTGATAAAGCTGTGAAAGA+AGG | + | chr8_4:3498118-3498137 | Msa1307640:CDS | 35.0% | |
| TATGCAAAAACCTAGCTTCT+GGG | - | chr8_4:3498231-3498250 | None:intergenic | 35.0% | |
| ATATGCAAAAACCTAGCTTC+TGG | - | chr8_4:3498232-3498251 | None:intergenic | 35.0% | |
| !! | CCATTTTTATTACTGGGTGT+TGG | - | chr8_4:3498298-3498317 | None:intergenic | 35.0% |
| CCAACACCCAGTAATAAAAA+TGG | + | chr8_4:3498295-3498314 | Msa1307640:CDS | 35.0% | |
| TTTCGAAACATCAACAGGTT+TGG | - | chr8_4:3498355-3498374 | None:intergenic | 35.0% | |
| CCAAATTTCGAAACATCAAC+AGG | - | chr8_4:3498360-3498379 | None:intergenic | 35.0% | |
| CCTGTTGATGTTTCGAAATT+TGG | + | chr8_4:3498357-3498376 | Msa1307640:intron | 35.0% | |
| ATCACAATTGTTACACCAGA+GGG | - | chr8_4:3498417-3498436 | None:intergenic | 35.0% | |
| AATCACAATTGTTACACCAG+AGG | - | chr8_4:3498418-3498437 | None:intergenic | 35.0% | |
| ATCTTGTAATCAAGCATCAC+AGG | - | chr8_4:3498480-3498499 | None:intergenic | 35.0% | |
| ATGTAAATCCCATAACAAGG+GGG | - | chr8_4:3498534-3498553 | None:intergenic | 35.0% | |
| CATGTAAATCCCATAACAAG+GGG | - | chr8_4:3498535-3498554 | None:intergenic | 35.0% | |
| CACATGTAAATCCCATAACA+AGG | - | chr8_4:3498537-3498556 | None:intergenic | 35.0% | |
| TGTTATGGGATTTACATGTG+TGG | + | chr8_4:3498537-3498556 | Msa1307640:CDS | 35.0% | |
| !! | TTTGAGGATTTGTTGGAACA+AGG | + | chr8_4:3498567-3498586 | Msa1307640:CDS | 35.0% |
| GATGAATGTTCCTTTCACTT+TGG | + | chr8_4:3498704-3498723 | Msa1307640:CDS | 35.0% | |
| TCAGATTTCTCCAAAGTGAA+AGG | - | chr8_4:3498717-3498736 | None:intergenic | 35.0% | |
| GTTGGAAGGTGAGTTTATTA+AGG | + | chr8_4:3498737-3498756 | Msa1307640:CDS | 35.0% | |
| GAGAATATGGTTCAGCTTAA+GGG | + | chr8_4:3498771-3498790 | Msa1307640:CDS | 35.0% | |
| !!! | TTTTTTGAGGAAAGGGTTGT+TGG | - | chr8_4:3497673-3497692 | None:intergenic | 35.0% |
| !!! | TGATGGGTTTTTTGAGGAAA+GGG | - | chr8_4:3497680-3497699 | None:intergenic | 35.0% |
| ! | ATTGAAATGGGTTTGAAGGT+GGG | - | chr8_4:3497738-3497757 | None:intergenic | 35.0% |
| ! | TACCCTTTTGAATATCTCCT+CGG | + | chr8_4:3497986-3498005 | Msa1307640:intron | 35.0% |
| TTCCGAGGAGATATTCAAAA+GGG | - | chr8_4:3497991-3498010 | None:intergenic | 35.0% | |
| ATTCCGAGGAGATATTCAAA+AGG | - | chr8_4:3497992-3498011 | None:intergenic | 35.0% | |
| AAAAAGAACGGAATATTCCG+AGG | - | chr8_4:3498006-3498025 | None:intergenic | 35.0% | |
| AGTGATAAAGCTGTGAAAGA+AGG | + | chr8_4:3498118-3498137 | Msa1307640:CDS | 35.0% | |
| TATGCAAAAACCTAGCTTCT+GGG | - | chr8_4:3498231-3498250 | None:intergenic | 35.0% | |
| ATATGCAAAAACCTAGCTTC+TGG | - | chr8_4:3498232-3498251 | None:intergenic | 35.0% | |
| !! | CCATTTTTATTACTGGGTGT+TGG | - | chr8_4:3498298-3498317 | None:intergenic | 35.0% |
| CCAACACCCAGTAATAAAAA+TGG | + | chr8_4:3498295-3498314 | Msa1307640:CDS | 35.0% | |
| TTTCGAAACATCAACAGGTT+TGG | - | chr8_4:3498355-3498374 | None:intergenic | 35.0% | |
| CCAAATTTCGAAACATCAAC+AGG | - | chr8_4:3498360-3498379 | None:intergenic | 35.0% | |
| CCTGTTGATGTTTCGAAATT+TGG | + | chr8_4:3498357-3498376 | Msa1307640:intron | 35.0% | |
| ATCACAATTGTTACACCAGA+GGG | - | chr8_4:3498417-3498436 | None:intergenic | 35.0% | |
| AATCACAATTGTTACACCAG+AGG | - | chr8_4:3498418-3498437 | None:intergenic | 35.0% | |
| ATCTTGTAATCAAGCATCAC+AGG | - | chr8_4:3498480-3498499 | None:intergenic | 35.0% | |
| ATGTAAATCCCATAACAAGG+GGG | - | chr8_4:3498534-3498553 | None:intergenic | 35.0% | |
| CATGTAAATCCCATAACAAG+GGG | - | chr8_4:3498535-3498554 | None:intergenic | 35.0% | |
| CACATGTAAATCCCATAACA+AGG | - | chr8_4:3498537-3498556 | None:intergenic | 35.0% | |
| TGTTATGGGATTTACATGTG+TGG | + | chr8_4:3498537-3498556 | Msa1307640:CDS | 35.0% | |
| !! | TTTGAGGATTTGTTGGAACA+AGG | + | chr8_4:3498567-3498586 | Msa1307640:CDS | 35.0% |
| GATGAATGTTCCTTTCACTT+TGG | + | chr8_4:3498704-3498723 | Msa1307640:CDS | 35.0% | |
| TCAGATTTCTCCAAAGTGAA+AGG | - | chr8_4:3498717-3498736 | None:intergenic | 35.0% | |
| GTTGGAAGGTGAGTTTATTA+AGG | + | chr8_4:3498737-3498756 | Msa1307640:CDS | 35.0% | |
| GAGAATATGGTTCAGCTTAA+GGG | + | chr8_4:3498771-3498790 | Msa1307640:CDS | 35.0% | |
| !!! | GTGATGGGTTTTTTGAGGAA+AGG | - | chr8_4:3497681-3497700 | None:intergenic | 40.0% |
| ! | TTGAAATGGGTTTGAAGGTG+GGG | - | chr8_4:3497737-3497756 | None:intergenic | 40.0% |
| ! | GATTGAAATGGGTTTGAAGG+TGG | - | chr8_4:3497739-3497758 | None:intergenic | 40.0% |
| ! | GCGGAGCATTTGATTGAAAT+GGG | - | chr8_4:3497750-3497769 | None:intergenic | 40.0% |
| ! | GCAGATCTGATTCAGCTTTT+TGG | - | chr8_4:3497965-3497984 | None:intergenic | 40.0% |
| ! | TCCGTTCTTTTTCTTCAAGG+CGG | + | chr8_4:3498014-3498033 | Msa1307640:intron | 40.0% |
| ! | GCTGTTGATTACATCGTTAC+CGG | + | chr8_4:3498088-3498107 | Msa1307640:CDS | 40.0% |
| !! | AAACCAAACGTGATTTGGTC+TGG | + | chr8_4:3498154-3498173 | Msa1307640:CDS | 40.0% |
| !! | AACCAAACGTGATTTGGTCT+GGG | + | chr8_4:3498155-3498174 | Msa1307640:CDS | 40.0% |
| TACAATACACCCCCTTGTTA+TGG | + | chr8_4:3498522-3498541 | Msa1307640:CDS | 40.0% | |
| ! | ACAATACACCCCCTTGTTAT+GGG | + | chr8_4:3498523-3498542 | Msa1307640:CDS | 40.0% |
| TGGGATTTACATGTGTGGTT+TGG | + | chr8_4:3498542-3498561 | Msa1307640:CDS | 40.0% | |
| !!! | CATGTGTGGTTTGGTTTTTG+AGG | + | chr8_4:3498551-3498570 | Msa1307640:CDS | 40.0% |
| TTTGTTGGAACAAGGTGGTT+TGG | + | chr8_4:3498575-3498594 | Msa1307640:CDS | 40.0% | |
| GTCCTGTTGAGAAATCTGTT+AGG | + | chr8_4:3498676-3498695 | Msa1307640:CDS | 40.0% | |
| GACCTAACAGATTTCTCAAC+AGG | - | chr8_4:3498681-3498700 | None:intergenic | 40.0% | |
| ! | CACTTTGGAGAAATCTGAGT+TGG | + | chr8_4:3498719-3498738 | Msa1307640:CDS | 40.0% |
| ! | TTGGAGAAATCTGAGTTGGA+AGG | + | chr8_4:3498723-3498742 | Msa1307640:CDS | 40.0% |
| GTTTATTAAGGACGCTGCTA+AGG | + | chr8_4:3498749-3498768 | Msa1307640:CDS | 40.0% | |
| GGAGAATATGGTTCAGCTTA+AGG | + | chr8_4:3498770-3498789 | Msa1307640:CDS | 40.0% | |
| TACAATGCTATGCCTTTAGC+TGG | + | chr8_4:3498828-3498847 | Msa1307640:CDS | 40.0% | |
| AACTTCTCAACACCAGCTAA+AGG | - | chr8_4:3498843-3498862 | None:intergenic | 40.0% | |
| ! | TTTAGCTGGTGTTGAGAAGT+TGG | + | chr8_4:3498842-3498861 | Msa1307640:CDS | 40.0% |
| !!! | GTGATGGGTTTTTTGAGGAA+AGG | - | chr8_4:3497681-3497700 | None:intergenic | 40.0% |
| ! | TTGAAATGGGTTTGAAGGTG+GGG | - | chr8_4:3497737-3497756 | None:intergenic | 40.0% |
| ! | GATTGAAATGGGTTTGAAGG+TGG | - | chr8_4:3497739-3497758 | None:intergenic | 40.0% |
| ! | GCGGAGCATTTGATTGAAAT+GGG | - | chr8_4:3497750-3497769 | None:intergenic | 40.0% |
| ! | GCAGATCTGATTCAGCTTTT+TGG | - | chr8_4:3497965-3497984 | None:intergenic | 40.0% |
| ! | TCCGTTCTTTTTCTTCAAGG+CGG | + | chr8_4:3498014-3498033 | Msa1307640:intron | 40.0% |
| ! | GCTGTTGATTACATCGTTAC+CGG | + | chr8_4:3498088-3498107 | Msa1307640:CDS | 40.0% |
| !! | AAACCAAACGTGATTTGGTC+TGG | + | chr8_4:3498154-3498173 | Msa1307640:CDS | 40.0% |
| !! | AACCAAACGTGATTTGGTCT+GGG | + | chr8_4:3498155-3498174 | Msa1307640:CDS | 40.0% |
| TACAATACACCCCCTTGTTA+TGG | + | chr8_4:3498522-3498541 | Msa1307640:CDS | 40.0% | |
| ! | ACAATACACCCCCTTGTTAT+GGG | + | chr8_4:3498523-3498542 | Msa1307640:CDS | 40.0% |
| TGGGATTTACATGTGTGGTT+TGG | + | chr8_4:3498542-3498561 | Msa1307640:CDS | 40.0% | |
| !!! | CATGTGTGGTTTGGTTTTTG+AGG | + | chr8_4:3498551-3498570 | Msa1307640:CDS | 40.0% |
| TTTGTTGGAACAAGGTGGTT+TGG | + | chr8_4:3498575-3498594 | Msa1307640:CDS | 40.0% | |
| GTCCTGTTGAGAAATCTGTT+AGG | + | chr8_4:3498676-3498695 | Msa1307640:CDS | 40.0% | |
| GACCTAACAGATTTCTCAAC+AGG | - | chr8_4:3498681-3498700 | None:intergenic | 40.0% | |
| ! | CACTTTGGAGAAATCTGAGT+TGG | + | chr8_4:3498719-3498738 | Msa1307640:CDS | 40.0% |
| ! | TTGGAGAAATCTGAGTTGGA+AGG | + | chr8_4:3498723-3498742 | Msa1307640:CDS | 40.0% |
| GTTTATTAAGGACGCTGCTA+AGG | + | chr8_4:3498749-3498768 | Msa1307640:CDS | 40.0% | |
| GGAGAATATGGTTCAGCTTA+AGG | + | chr8_4:3498770-3498789 | Msa1307640:CDS | 40.0% | |
| TACAATGCTATGCCTTTAGC+TGG | + | chr8_4:3498828-3498847 | Msa1307640:CDS | 40.0% | |
| AACTTCTCAACACCAGCTAA+AGG | - | chr8_4:3498843-3498862 | None:intergenic | 40.0% | |
| ! | TTTAGCTGGTGTTGAGAAGT+TGG | + | chr8_4:3498842-3498861 | Msa1307640:CDS | 40.0% |
| !! | AGGAAAGGGTTGTTGGTTTG+GGG | - | chr8_4:3497666-3497685 | None:intergenic | 45.0% |
| !! | GAGGAAAGGGTTGTTGGTTT+GGG | - | chr8_4:3497667-3497686 | None:intergenic | 45.0% |
| ! | TGAGGAAAGGGTTGTTGGTT+TGG | - | chr8_4:3497668-3497687 | None:intergenic | 45.0% |
| ! | GGCGGAGCATTTGATTGAAA+TGG | - | chr8_4:3497751-3497770 | None:intergenic | 45.0% |
| ! | TGAGGAATGGGTTTGGGTTT+GGG | - | chr8_4:3497796-3497815 | None:intergenic | 45.0% |
| !! | CTTTGAGGAGGACGTTTTCA+GGG | - | chr8_4:3497857-3497876 | None:intergenic | 45.0% |
| ! | CCAGTTGTAGAGCTCTGATT+GGG | - | chr8_4:3497880-3497899 | None:intergenic | 45.0% |
| GCCGCCTTGAAGAAAAAGAA+CGG | - | chr8_4:3498018-3498037 | None:intergenic | 45.0% | |
| !! | ATTACATCGTTACCGGTTCG+TGG | + | chr8_4:3498095-3498114 | Msa1307640:CDS | 45.0% |
| ! | AGCTTTATCACTCCACGAAC+CGG | - | chr8_4:3498110-3498129 | None:intergenic | 45.0% |
| TTCCCAGACCAAATCACGTT+TGG | - | chr8_4:3498160-3498179 | None:intergenic | 45.0% | |
| TGAAACAGAACCCAGAAGCT+AGG | + | chr8_4:3498218-3498237 | Msa1307640:CDS | 45.0% | |
| !! | GAGGATTTGTTGGAACAAGG+TGG | + | chr8_4:3498570-3498589 | Msa1307640:CDS | 45.0% |
| TGGTTCAGCTTAAGGGTCAT+AGG | + | chr8_4:3498778-3498797 | Msa1307640:CDS | 45.0% | |
| CTTAAGGGTCATAGGTCTGT+TGG | + | chr8_4:3498786-3498805 | Msa1307640:CDS | 45.0% | |
| !! | AGGAAAGGGTTGTTGGTTTG+GGG | - | chr8_4:3497666-3497685 | None:intergenic | 45.0% |
| !! | GAGGAAAGGGTTGTTGGTTT+GGG | - | chr8_4:3497667-3497686 | None:intergenic | 45.0% |
| ! | TGAGGAAAGGGTTGTTGGTT+TGG | - | chr8_4:3497668-3497687 | None:intergenic | 45.0% |
| ! | GGCGGAGCATTTGATTGAAA+TGG | - | chr8_4:3497751-3497770 | None:intergenic | 45.0% |
| ! | TGAGGAATGGGTTTGGGTTT+GGG | - | chr8_4:3497796-3497815 | None:intergenic | 45.0% |
| !! | CTTTGAGGAGGACGTTTTCA+GGG | - | chr8_4:3497857-3497876 | None:intergenic | 45.0% |
| ! | CCAGTTGTAGAGCTCTGATT+GGG | - | chr8_4:3497880-3497899 | None:intergenic | 45.0% |
| GCCGCCTTGAAGAAAAAGAA+CGG | - | chr8_4:3498018-3498037 | None:intergenic | 45.0% | |
| !! | ATTACATCGTTACCGGTTCG+TGG | + | chr8_4:3498095-3498114 | Msa1307640:CDS | 45.0% |
| ! | AGCTTTATCACTCCACGAAC+CGG | - | chr8_4:3498110-3498129 | None:intergenic | 45.0% |
| TTCCCAGACCAAATCACGTT+TGG | - | chr8_4:3498160-3498179 | None:intergenic | 45.0% | |
| TGAAACAGAACCCAGAAGCT+AGG | + | chr8_4:3498218-3498237 | Msa1307640:CDS | 45.0% | |
| !! | GAGGATTTGTTGGAACAAGG+TGG | + | chr8_4:3498570-3498589 | Msa1307640:CDS | 45.0% |
| TGGTTCAGCTTAAGGGTCAT+AGG | + | chr8_4:3498778-3498797 | Msa1307640:CDS | 45.0% | |
| CTTAAGGGTCATAGGTCTGT+TGG | + | chr8_4:3498786-3498805 | Msa1307640:CDS | 45.0% | |
| !!! | GTGGGGTGATGGGTTTTTTG+AGG | - | chr8_4:3497686-3497705 | None:intergenic | 50.0% |
| GGAGATTGTTGAGGTGAGTG+GGG | - | chr8_4:3497703-3497722 | None:intergenic | 50.0% | |
| GGGAGATTGTTGAGGTGAGT+GGG | - | chr8_4:3497704-3497723 | None:intergenic | 50.0% | |
| AGGGAGATTGTTGAGGTGAG+TGG | - | chr8_4:3497705-3497724 | None:intergenic | 50.0% | |
| ! | AATGGGTTTGAAGGTGGGGT+TGG | - | chr8_4:3497733-3497752 | None:intergenic | 50.0% |
| ! | GAGGAATGGGTTTGGGTTTG+GGG | - | chr8_4:3497795-3497814 | None:intergenic | 50.0% |
| ! | CTGAGGAATGGGTTTGGGTT+TGG | - | chr8_4:3497797-3497816 | None:intergenic | 50.0% |
| ! | GCGATCTGAGGAATGGGTTT+GGG | - | chr8_4:3497802-3497821 | None:intergenic | 50.0% |
| GAAGACGCGATCTGAGGAAT+GGG | - | chr8_4:3497808-3497827 | None:intergenic | 50.0% | |
| TGAAGACGCGATCTGAGGAA+TGG | - | chr8_4:3497809-3497828 | None:intergenic | 50.0% | |
| GAAGTTGAAGACGCGATCTG+AGG | - | chr8_4:3497814-3497833 | None:intergenic | 50.0% | |
| !!! | GCTTTGAGGAGGACGTTTTC+AGG | - | chr8_4:3497858-3497877 | None:intergenic | 50.0% |
| ! | AGAGCTCTGATTGGGCTTTG+AGG | - | chr8_4:3497872-3497891 | None:intergenic | 50.0% |
| CCCAATCAGAGCTCTACAAC+TGG | + | chr8_4:3497877-3497896 | Msa1307640:CDS | 50.0% | |
| ! | GCCAGTTGTAGAGCTCTGAT+TGG | - | chr8_4:3497881-3497900 | None:intergenic | 50.0% |
| CATCTCCATGACGCTCATAC+CGG | - | chr8_4:3497910-3497929 | None:intergenic | 50.0% | |
| GTCATGGAGATGAGTCACAG+AGG | + | chr8_4:3497918-3497937 | Msa1307640:CDS | 50.0% | |
| TGCAGATATTCAACGGCACG+CGG | - | chr8_4:3498057-3498076 | None:intergenic | 50.0% | |
| TGCTGGTGCTCAGAAGAATG+TGG | + | chr8_4:3498389-3498408 | Msa1307640:intron | 50.0% | |
| GCTGGTGCTCAGAAGAATGT+GGG | + | chr8_4:3498390-3498409 | Msa1307640:intron | 50.0% | |
| GGACGCTGCTAAGGAGAATA+TGG | + | chr8_4:3498758-3498777 | Msa1307640:CDS | 50.0% | |
| AAGGGTCATAGGTCTGTTGG+TGG | + | chr8_4:3498789-3498808 | Msa1307640:CDS | 50.0% | |
| ! | AGCTGGTGTTGAGAAGTTGG+TGG | + | chr8_4:3498845-3498864 | Msa1307640:CDS | 50.0% |
| !!! | GTGGGGTGATGGGTTTTTTG+AGG | - | chr8_4:3497686-3497705 | None:intergenic | 50.0% |
| GGAGATTGTTGAGGTGAGTG+GGG | - | chr8_4:3497703-3497722 | None:intergenic | 50.0% | |
| GGGAGATTGTTGAGGTGAGT+GGG | - | chr8_4:3497704-3497723 | None:intergenic | 50.0% | |
| AGGGAGATTGTTGAGGTGAG+TGG | - | chr8_4:3497705-3497724 | None:intergenic | 50.0% | |
| ! | AATGGGTTTGAAGGTGGGGT+TGG | - | chr8_4:3497733-3497752 | None:intergenic | 50.0% |
| ! | GAGGAATGGGTTTGGGTTTG+GGG | - | chr8_4:3497795-3497814 | None:intergenic | 50.0% |
| ! | CTGAGGAATGGGTTTGGGTT+TGG | - | chr8_4:3497797-3497816 | None:intergenic | 50.0% |
| ! | GCGATCTGAGGAATGGGTTT+GGG | - | chr8_4:3497802-3497821 | None:intergenic | 50.0% |
| GAAGACGCGATCTGAGGAAT+GGG | - | chr8_4:3497808-3497827 | None:intergenic | 50.0% | |
| TGAAGACGCGATCTGAGGAA+TGG | - | chr8_4:3497809-3497828 | None:intergenic | 50.0% | |
| GAAGTTGAAGACGCGATCTG+AGG | - | chr8_4:3497814-3497833 | None:intergenic | 50.0% | |
| !!! | GCTTTGAGGAGGACGTTTTC+AGG | - | chr8_4:3497858-3497877 | None:intergenic | 50.0% |
| ! | AGAGCTCTGATTGGGCTTTG+AGG | - | chr8_4:3497872-3497891 | None:intergenic | 50.0% |
| CCCAATCAGAGCTCTACAAC+TGG | + | chr8_4:3497877-3497896 | Msa1307640:CDS | 50.0% | |
| ! | GCCAGTTGTAGAGCTCTGAT+TGG | - | chr8_4:3497881-3497900 | None:intergenic | 50.0% |
| CATCTCCATGACGCTCATAC+CGG | - | chr8_4:3497910-3497929 | None:intergenic | 50.0% | |
| GTCATGGAGATGAGTCACAG+AGG | + | chr8_4:3497918-3497937 | Msa1307640:CDS | 50.0% | |
| TGCAGATATTCAACGGCACG+CGG | - | chr8_4:3498057-3498076 | None:intergenic | 50.0% | |
| TGCTGGTGCTCAGAAGAATG+TGG | + | chr8_4:3498389-3498408 | Msa1307640:intron | 50.0% | |
| GCTGGTGCTCAGAAGAATGT+GGG | + | chr8_4:3498390-3498409 | Msa1307640:intron | 50.0% | |
| GGACGCTGCTAAGGAGAATA+TGG | + | chr8_4:3498758-3498777 | Msa1307640:CDS | 50.0% | |
| AAGGGTCATAGGTCTGTTGG+TGG | + | chr8_4:3498789-3498808 | Msa1307640:CDS | 50.0% | |
| ! | AGCTGGTGTTGAGAAGTTGG+TGG | + | chr8_4:3498845-3498864 | Msa1307640:CDS | 50.0% |
| ! | CAGGAGATGGGTTTGTGGTG+AGG | - | chr8_4:3497643-3497662 | None:intergenic | 55.0% |
| !! | GTTGGTTTGGGGCAGGAGAT+GGG | - | chr8_4:3497655-3497674 | None:intergenic | 55.0% |
| !! | TGTTGGTTTGGGGCAGGAGA+TGG | - | chr8_4:3497656-3497675 | None:intergenic | 55.0% |
| !! | AAGGGTTGTTGGTTTGGGGC+AGG | - | chr8_4:3497662-3497681 | None:intergenic | 55.0% |
| GTTGAGGTGAGTGGGGTGAT+GGG | - | chr8_4:3497696-3497715 | None:intergenic | 55.0% | |
| TGTTGAGGTGAGTGGGGTGA+TGG | - | chr8_4:3497697-3497716 | None:intergenic | 55.0% | |
| !! | GTTTGAAGGTGGGGTTGGTG+CGG | - | chr8_4:3497728-3497747 | None:intergenic | 55.0% |
| ! | ATGGGTTTGGGTTTGGGGCT+GGG | - | chr8_4:3497790-3497809 | None:intergenic | 55.0% |
| ! | AATGGGTTTGGGTTTGGGGC+TGG | - | chr8_4:3497791-3497810 | None:intergenic | 55.0% |
| ! | CGCGATCTGAGGAATGGGTT+TGG | - | chr8_4:3497803-3497822 | None:intergenic | 55.0% |
| !! | GAGGAGGACGTTTTCAGGGA+GGG | - | chr8_4:3497853-3497872 | None:intergenic | 55.0% |
| !! | TGAGGAGGACGTTTTCAGGG+AGG | - | chr8_4:3497854-3497873 | None:intergenic | 55.0% |
| !! | GCTCTGATTGGGCTTTGAGG+AGG | - | chr8_4:3497869-3497888 | None:intergenic | 55.0% |
| TCAGAGCTCTACAACTGGCG+TGG | + | chr8_4:3497882-3497901 | Msa1307640:CDS | 55.0% | |
| CTCTACAACTGGCGTGGATC+CGG | + | chr8_4:3497888-3497907 | Msa1307640:CDS | 55.0% | |
| TGGATCCGGTATGAGCGTCA+TGG | + | chr8_4:3497902-3497921 | Msa1307640:CDS | 55.0% | |
| CAGAAGAATGTGGGTCCCTC+TGG | + | chr8_4:3498399-3498418 | Msa1307640:intron | 55.0% | |
| ! | CAGGAGATGGGTTTGTGGTG+AGG | - | chr8_4:3497643-3497662 | None:intergenic | 55.0% |
| !! | GTTGGTTTGGGGCAGGAGAT+GGG | - | chr8_4:3497655-3497674 | None:intergenic | 55.0% |
| !! | TGTTGGTTTGGGGCAGGAGA+TGG | - | chr8_4:3497656-3497675 | None:intergenic | 55.0% |
| !! | AAGGGTTGTTGGTTTGGGGC+AGG | - | chr8_4:3497662-3497681 | None:intergenic | 55.0% |
| GTTGAGGTGAGTGGGGTGAT+GGG | - | chr8_4:3497696-3497715 | None:intergenic | 55.0% | |
| TGTTGAGGTGAGTGGGGTGA+TGG | - | chr8_4:3497697-3497716 | None:intergenic | 55.0% | |
| !! | GTTTGAAGGTGGGGTTGGTG+CGG | - | chr8_4:3497728-3497747 | None:intergenic | 55.0% |
| ! | ATGGGTTTGGGTTTGGGGCT+GGG | - | chr8_4:3497790-3497809 | None:intergenic | 55.0% |
| ! | AATGGGTTTGGGTTTGGGGC+TGG | - | chr8_4:3497791-3497810 | None:intergenic | 55.0% |
| ! | CGCGATCTGAGGAATGGGTT+TGG | - | chr8_4:3497803-3497822 | None:intergenic | 55.0% |
| !! | GAGGAGGACGTTTTCAGGGA+GGG | - | chr8_4:3497853-3497872 | None:intergenic | 55.0% |
| !! | TGAGGAGGACGTTTTCAGGG+AGG | - | chr8_4:3497854-3497873 | None:intergenic | 55.0% |
| !! | GCTCTGATTGGGCTTTGAGG+AGG | - | chr8_4:3497869-3497888 | None:intergenic | 55.0% |
| TCAGAGCTCTACAACTGGCG+TGG | + | chr8_4:3497882-3497901 | Msa1307640:CDS | 55.0% | |
| CTCTACAACTGGCGTGGATC+CGG | + | chr8_4:3497888-3497907 | Msa1307640:CDS | 55.0% | |
| TGGATCCGGTATGAGCGTCA+TGG | + | chr8_4:3497902-3497921 | Msa1307640:CDS | 55.0% | |
| CAGAAGAATGTGGGTCCCTC+TGG | + | chr8_4:3498399-3498418 | Msa1307640:intron | 55.0% | |
| ! | TGGGGCAGGAGATGGGTTTG+TGG | - | chr8_4:3497648-3497667 | None:intergenic | 60.0% |
| GGTGCGGAGGGAGATTGTTG+AGG | - | chr8_4:3497712-3497731 | None:intergenic | 60.0% | |
| TTGGGGCTGGGCTTGGGTTT+GGG | - | chr8_4:3497778-3497797 | None:intergenic | 60.0% | |
| ! | TTTGGGGCTGGGCTTGGGTT+TGG | - | chr8_4:3497779-3497798 | None:intergenic | 60.0% |
| ! | TTGGGTTTGGGGCTGGGCTT+GGG | - | chr8_4:3497784-3497803 | None:intergenic | 60.0% |
| ! | TTTGGGTTTGGGGCTGGGCT+TGG | - | chr8_4:3497785-3497804 | None:intergenic | 60.0% |
| !! | ACGTTTTCAGGGAGGGTGGC+GGG | - | chr8_4:3497846-3497865 | None:intergenic | 60.0% |
| !! | GACGTTTTCAGGGAGGGTGG+CGG | - | chr8_4:3497847-3497866 | None:intergenic | 60.0% |
| !! | GAGGACGTTTTCAGGGAGGG+TGG | - | chr8_4:3497850-3497869 | None:intergenic | 60.0% |
| ! | TGGGGCAGGAGATGGGTTTG+TGG | - | chr8_4:3497648-3497667 | None:intergenic | 60.0% |
| GGTGCGGAGGGAGATTGTTG+AGG | - | chr8_4:3497712-3497731 | None:intergenic | 60.0% | |
| TTGGGGCTGGGCTTGGGTTT+GGG | - | chr8_4:3497778-3497797 | None:intergenic | 60.0% | |
| ! | TTTGGGGCTGGGCTTGGGTT+TGG | - | chr8_4:3497779-3497798 | None:intergenic | 60.0% |
| ! | TTGGGTTTGGGGCTGGGCTT+GGG | - | chr8_4:3497784-3497803 | None:intergenic | 60.0% |
| ! | TTTGGGTTTGGGGCTGGGCT+TGG | - | chr8_4:3497785-3497804 | None:intergenic | 60.0% |
| !! | ACGTTTTCAGGGAGGGTGGC+GGG | - | chr8_4:3497846-3497865 | None:intergenic | 60.0% |
| !! | GACGTTTTCAGGGAGGGTGG+CGG | - | chr8_4:3497847-3497866 | None:intergenic | 60.0% |
| !! | GAGGACGTTTTCAGGGAGGG+TGG | - | chr8_4:3497850-3497869 | None:intergenic | 60.0% |
| !! | GAAGGTGGGGTTGGTGCGGA+GGG | - | chr8_4:3497724-3497743 | None:intergenic | 65.0% |
| !! | TGAAGGTGGGGTTGGTGCGG+AGG | - | chr8_4:3497725-3497744 | None:intergenic | 65.0% |
| ! | GGCTTGGGTTTGGGTGGTGG+CGG | - | chr8_4:3497769-3497788 | None:intergenic | 65.0% |
| CTGGGCTTGGGTTTGGGTGG+TGG | - | chr8_4:3497772-3497791 | None:intergenic | 65.0% | |
| CGCGTCTTCAACTTCGCCGC+TGG | + | chr8_4:3497819-3497838 | Msa1307640:CDS | 65.0% | |
| TCAACGGCACGCGGCGAACT+GGG | - | chr8_4:3498048-3498067 | None:intergenic | 65.0% | |
| TTCAACGGCACGCGGCGAAC+TGG | - | chr8_4:3498049-3498068 | None:intergenic | 65.0% | |
| !! | GAAGGTGGGGTTGGTGCGGA+GGG | - | chr8_4:3497724-3497743 | None:intergenic | 65.0% |
| !! | TGAAGGTGGGGTTGGTGCGG+AGG | - | chr8_4:3497725-3497744 | None:intergenic | 65.0% |
| ! | GGCTTGGGTTTGGGTGGTGG+CGG | - | chr8_4:3497769-3497788 | None:intergenic | 65.0% |
| CTGGGCTTGGGTTTGGGTGG+TGG | - | chr8_4:3497772-3497791 | None:intergenic | 65.0% | |
| CGCGTCTTCAACTTCGCCGC+TGG | + | chr8_4:3497819-3497838 | Msa1307640:CDS | 65.0% | |
| TCAACGGCACGCGGCGAACT+GGG | - | chr8_4:3498048-3498067 | None:intergenic | 65.0% | |
| TTCAACGGCACGCGGCGAAC+TGG | - | chr8_4:3498049-3498068 | None:intergenic | 65.0% | |
| GGGCTGGGCTTGGGTTTGGG+TGG | - | chr8_4:3497775-3497794 | None:intergenic | 70.0% | |
| GGGCTGGGCTTGGGTTTGGG+TGG | - | chr8_4:3497775-3497794 | None:intergenic | 70.0% | |
| !! | AGGGAGGGTGGCGGGTCCAG+CGG | - | chr8_4:3497838-3497857 | None:intergenic | 75.0% |
| GCACGCGGCGAACTGGGTGG+TGG | - | chr8_4:3498042-3498061 | None:intergenic | 75.0% | |
| ACGGCACGCGGCGAACTGGG+TGG | - | chr8_4:3498045-3498064 | None:intergenic | 75.0% | |
| !! | AGGGAGGGTGGCGGGTCCAG+CGG | - | chr8_4:3497838-3497857 | None:intergenic | 75.0% |
| GCACGCGGCGAACTGGGTGG+TGG | - | chr8_4:3498042-3498061 | None:intergenic | 75.0% | |
| ACGGCACGCGGCGAACTGGG+TGG | - | chr8_4:3498045-3498064 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 3497621 | 3498902 | 3497621 | ID=Msa1307640;Name=Msa1307640 |
| chr8_4 | mRNA | 3497621 | 3498902 | 3497621 | ID=Msa1307640-mRNA-1;Parent=Msa1307640;Name=Msa1307640-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|364 |
| chr8_4 | exon | 3497621 | 3497939 | 3497621 | ID=Msa1307640-mRNA-1:exon:1020;Parent=Msa1307640-mRNA-1 |
| chr8_4 | exon | 3498050 | 3498324 | 3498050 | ID=Msa1307640-mRNA-1:exon:1021;Parent=Msa1307640-mRNA-1 |
| chr8_4 | exon | 3498402 | 3498902 | 3498402 | ID=Msa1307640-mRNA-1:exon:1022;Parent=Msa1307640-mRNA-1 |
| chr8_4 | CDS | 3497621 | 3497939 | 3497621 | ID=Msa1307640-mRNA-1:cds;Parent=Msa1307640-mRNA-1 |
| chr8_4 | CDS | 3498050 | 3498324 | 3498050 | ID=Msa1307640-mRNA-1:cds;Parent=Msa1307640-mRNA-1 |
| chr8_4 | CDS | 3498402 | 3498902 | 3498402 | ID=Msa1307640-mRNA-1:cds;Parent=Msa1307640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
