Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310560 | sp|Q67ZB3|FRL3_ARATH | 58.115 | 573 | 197 | 10 | 1 | 545 | 1 | 558 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310560 | A0A072TWW9 | 97.064 | 545 | 16 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1094 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1229920 | Msa1310560 | 0.890018 | 1.439137e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310560 | MtrunA17_Chr8g0337661 | 97.064 | 545 | 16 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1094 |
| Msa1310560 | MtrunA17_Chr8g0337651 | 79.707 | 547 | 109 | 1 | 1 | 545 | 1 | 547 | 0.0 | 916 |
| Msa1310560 | MtrunA17_Chr4g0053711 | 37.454 | 542 | 303 | 15 | 16 | 538 | 14 | 538 | 2.91e-108 | 334 |
| Msa1310560 | MtrunA17_Chr1g0205391 | 29.014 | 517 | 301 | 15 | 34 | 537 | 29 | 492 | 1.71e-51 | 184 |
| Msa1310560 | MtrunA17_Chr8g0390621 | 28.160 | 451 | 251 | 11 | 7 | 454 | 6 | 386 | 3.08e-41 | 156 |
| Msa1310560 | MtrunA17_Chr3g0101121 | 33.448 | 290 | 174 | 5 | 171 | 460 | 100 | 370 | 5.32e-40 | 152 |
| Msa1310560 | MtrunA17_Chr5g0445281 | 26.245 | 522 | 299 | 16 | 9 | 519 | 13 | 459 | 5.48e-36 | 142 |
| Msa1310560 | MtrunA17_Chr3g0131341 | 26.715 | 277 | 194 | 6 | 175 | 448 | 155 | 425 | 1.30e-23 | 105 |
| Msa1310560 | MtrunA17_Chr8g0361651 | 27.778 | 252 | 156 | 7 | 202 | 448 | 174 | 404 | 7.65e-15 | 77.0 |
| Msa1310560 | MtrunA17_Chr2g0325711 | 23.503 | 451 | 290 | 12 | 11 | 431 | 391 | 816 | 1.84e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310560 | AT5G48385.1 | 58.115 | 573 | 197 | 10 | 1 | 545 | 1 | 558 | 0.0 | 614 |
| Msa1310560 | AT3G22440.1 | 28.411 | 535 | 317 | 13 | 22 | 541 | 15 | 498 | 1.52e-59 | 206 |
| Msa1310560 | AT4G14900.1 | 29.015 | 548 | 315 | 16 | 1 | 527 | 1 | 495 | 5.56e-54 | 191 |
| Msa1310560 | AT5G16320.1 | 30.052 | 386 | 224 | 11 | 170 | 543 | 99 | 450 | 5.34e-42 | 157 |
| Msa1310560 | AT1G31814.1 | 30.347 | 346 | 203 | 11 | 143 | 472 | 64 | 387 | 3.30e-40 | 152 |
| Msa1310560 | AT5G27230.1 | 27.500 | 240 | 143 | 6 | 267 | 487 | 623 | 850 | 1.91e-19 | 92.8 |
| Msa1310560 | AT4G00650.1 | 30.818 | 159 | 106 | 3 | 170 | 328 | 143 | 297 | 1.70e-12 | 68.9 |
| Msa1310560 | AT5G27220.1 | 28.249 | 177 | 117 | 2 | 268 | 444 | 918 | 1084 | 2.50e-12 | 70.5 |
| Msa1310560 | AT5G27220.3 | 28.249 | 177 | 117 | 2 | 268 | 444 | 918 | 1084 | 2.50e-12 | 70.5 |
| Msa1310560 | AT5G27220.4 | 30.519 | 154 | 96 | 2 | 296 | 444 | 882 | 1029 | 4.21e-12 | 69.7 |
| Msa1310560 | AT5G27220.2 | 30.519 | 154 | 96 | 2 | 296 | 444 | 882 | 1029 | 4.21e-12 | 69.7 |
Find 143 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTTGGATCATTCGTTTC+TGG | 0.146224 | 8_4:-7177349 | None:intergenic |
| CATAACATTTCACATGTTTA+AGG | 0.182141 | 8_4:-7177779 | None:intergenic |
| ACCATTGGCACGGGGTCTTT+TGG | 0.200957 | 8_4:-7177423 | None:intergenic |
| TTCTTCAATGCACTTGATTA+TGG | 0.201533 | 8_4:-7177291 | None:intergenic |
| TTCAGTTTCCCTCTTCTTAT+CGG | 0.212079 | 8_4:-7177384 | None:intergenic |
| TGCCCTATCCTTGATATCTT+TGG | 0.215058 | 8_4:-7174608 | None:intergenic |
| ACTTAAGACTAAATATTAAT+AGG | 0.221856 | 8_4:-7177702 | None:intergenic |
| GACTTGGCTACTGTCTTTAA+TGG | 0.246449 | 8_4:+7174169 | Msa1310560:CDS |
| AAGTGATTTCCTGACCAATT+TGG | 0.264372 | 8_4:+7174564 | Msa1310560:CDS |
| CCAAAGTAAGTTCCAGGATT+AGG | 0.271606 | 8_4:-7177611 | None:intergenic |
| TTGCAACTTCTAGCTAGTTT+TGG | 0.273192 | 8_4:+7174718 | Msa1310560:CDS |
| TTCTTTCCTTCACACCATTC+AGG | 0.297338 | 8_4:+7172709 | Msa1310560:five_prime_UTR |
| TTCCCTCTTCTTATCGGCCT+TGG | 0.298760 | 8_4:-7177378 | None:intergenic |
| TCGACAGACTCAAATTAAAT+AGG | 0.313310 | 8_4:-7177917 | None:intergenic |
| CCTAGGAGAGAGAAAGAAAA+AGG | 0.317978 | 8_4:-7172625 | None:intergenic |
| CTGTTACTCTTAACTTGAAA+TGG | 0.318067 | 8_4:+7173903 | Msa1310560:CDS |
| TTTGTTTAGCTTCTTTACTA+TGG | 0.318242 | 8_4:+7173787 | Msa1310560:intron |
| AGTGATTTCCTGACCAATTT+GGG | 0.319354 | 8_4:+7174565 | Msa1310560:CDS |
| CGGCCTTGGCCTTCTCTAGT+TGG | 0.323230 | 8_4:-7177364 | None:intergenic |
| CCGAACCAGTATCATGTTAC+TGG | 0.331112 | 8_4:+7174534 | Msa1310560:CDS |
| CCATTTCCAAAGTAAGTTCC+AGG | 0.332535 | 8_4:-7177617 | None:intergenic |
| ATAACATTTCACATGTTTAA+GGG | 0.336538 | 8_4:-7177778 | None:intergenic |
| TGCAGGTGTGATTAAAGTTT+TGG | 0.339912 | 8_4:+7175030 | Msa1310560:intron |
| CCTAATCCTGGAACTTACTT+TGG | 0.351273 | 8_4:+7177611 | Msa1310560:CDS |
| TTCATTAAAACGCCTCTTCA+AGG | 0.368337 | 8_4:-7173963 | None:intergenic |
| ACTAGCTAGAAGTTGCAAAA+AGG | 0.370539 | 8_4:-7174713 | None:intergenic |
| CCTGGAACTTACTTTGGAAA+TGG | 0.374088 | 8_4:+7177617 | Msa1310560:CDS |
| CTGATTTATGCCGATGCCTT+GGG | 0.381995 | 8_4:+7174812 | Msa1310560:CDS |
| AGGATTAGGAGAGACGTTAT+AGG | 0.383164 | 8_4:-7177597 | None:intergenic |
| TAAGACTTAAGCAGAGGAAT+AGG | 0.383560 | 8_4:-7175121 | None:intergenic |
| TCGAGAAATGATAGAGAAAC+AGG | 0.388435 | 8_4:+7174030 | Msa1310560:CDS |
| ACAGGTTTCTCCTTGACATC+TGG | 0.390907 | 8_4:-7174205 | None:intergenic |
| CTTAAGACTAAATATTAATA+GGG | 0.392778 | 8_4:-7177701 | None:intergenic |
| GTACAACATACAACAGCTTA+AGG | 0.393144 | 8_4:-7177731 | None:intergenic |
| GGAGATATGTAGCTTGATAT+TGG | 0.406013 | 8_4:-7177643 | None:intergenic |
| ACATTCCAGTAACATGATAC+TGG | 0.409399 | 8_4:-7174539 | None:intergenic |
| ATGCCGATGCCTTGGGTTGT+CGG | 0.412332 | 8_4:+7174819 | Msa1310560:CDS |
| GTTGGTGCTGGGTACATGTA+AGG | 0.412959 | 8_4:-7177539 | None:intergenic |
| ATTAGAAACAGAACCCAAAT+TGG | 0.414560 | 8_4:-7174578 | None:intergenic |
| TTGCATTTCTAGAGAGAGAA+TGG | 0.418508 | 8_4:+7172649 | Msa1310560:five_prime_UTR |
| ACTTGGCTACTGTCTTTAAT+GGG | 0.419239 | 8_4:+7174170 | Msa1310560:CDS |
| TAACAGAGTTGATACATTAG+AGG | 0.428837 | 8_4:-7177839 | None:intergenic |
| TTGCATAGCTTTACCAACTC+TGG | 0.435215 | 8_4:-7174313 | None:intergenic |
| GCAAATTGATGCTGTTAACT+TGG | 0.438048 | 8_4:+7175066 | Msa1310560:CDS |
| CGTGCCAATGGTGCTGGATA+TGG | 0.438659 | 8_4:+7177434 | Msa1310560:CDS |
| GCTGATTTATGCCGATGCCT+TGG | 0.440901 | 8_4:+7174811 | Msa1310560:CDS |
| AAGAGAGCTGTTTGCTCTCA+AGG | 0.446988 | 8_4:+7177268 | Msa1310560:CDS |
| CTGTGGATGCTGTGTCCACT+AGG | 0.452001 | 8_4:+7174224 | Msa1310560:CDS |
| TTCACCGTCTCTCTAATTAG+TGG | 0.452168 | 8_4:-7177664 | None:intergenic |
| TTAAGAGCTGCTCCCAATGC+TGG | 0.456906 | 8_4:+7174421 | Msa1310560:CDS |
| AGACCCCGTGCCAATGGTGC+TGG | 0.459468 | 8_4:+7177428 | Msa1310560:CDS |
| ATCGGCATAAATCAGCAGTT+TGG | 0.462780 | 8_4:-7174804 | None:intergenic |
| AAATCACTGCTCCCCTTACC+TGG | 0.464138 | 8_4:+7177565 | Msa1310560:CDS |
| CGTTATAGGTTGCAGAAGCC+AGG | 0.465914 | 8_4:-7177583 | None:intergenic |
| TACAACATACAACAGCTTAA+GGG | 0.474779 | 8_4:-7177730 | None:intergenic |
| CTTCTTTACTATGGAGGACA+AGG | 0.477549 | 8_4:+7173796 | Msa1310560:exon |
| TGCTAGCAACGGGAATTCCT+TGG | 0.479571 | 8_4:+7174681 | Msa1310560:CDS |
| GGCTAATTCCAATGGTATCT+CGG | 0.486974 | 8_4:+7174776 | Msa1310560:CDS |
| TGTGATTTCCAAAGATATCA+AGG | 0.489981 | 8_4:+7174600 | Msa1310560:CDS |
| AAACAGAACCCAAATTGGTC+AGG | 0.497436 | 8_4:-7174573 | None:intergenic |
| GATGAGTTAACACTCTTGAC+TGG | 0.499098 | 8_4:-7175172 | None:intergenic |
| TTGTACGGAAGTGTCAAGTC+AGG | 0.499935 | 8_4:+7174477 | Msa1310560:CDS |
| CCAGTAACATGATACTGGTT+CGG | 0.506230 | 8_4:-7174534 | None:intergenic |
| TTGACATGGATGCTAGCAAC+GGG | 0.508947 | 8_4:+7174671 | Msa1310560:CDS |
| AAAACTAGACAGCCAGCATT+GGG | 0.509841 | 8_4:-7174433 | None:intergenic |
| TTCCAAAGATATCAAGGATA+GGG | 0.509975 | 8_4:+7174606 | Msa1310560:CDS |
| TAAAACTAGACAGCCAGCAT+TGG | 0.512865 | 8_4:-7174434 | None:intergenic |
| GAAGGTTTCATCAAAGGACT+TGG | 0.515565 | 8_4:+7174153 | Msa1310560:CDS |
| GGGCGGTCATACACGTATTG+AGG | 0.516085 | 8_4:-7177518 | None:intergenic |
| CCCAAAAGACCCCGTGCCAA+TGG | 0.519470 | 8_4:+7177422 | Msa1310560:CDS |
| CCTTTGAAGTCTCTGCAGCA+AGG | 0.521025 | 8_4:-7174080 | None:intergenic |
| CAAGAACCTTGCTGCTGTGA+GGG | 0.522921 | 8_4:+7174381 | Msa1310560:CDS |
| TTAATGAGGAGGAGTTATCC+AGG | 0.526398 | 8_4:+7174755 | Msa1310560:CDS |
| TAGGTTGCAGAAGCCAGGTA+AGG | 0.526535 | 8_4:-7177578 | None:intergenic |
| AGATACCATTGGAATTAGCC+TGG | 0.529323 | 8_4:-7174773 | None:intergenic |
| CGTTTCTGGAGAGGATCGAT+TGG | 0.530216 | 8_4:-7177335 | None:intergenic |
| TATAACGTCTCTCCTAATCC+TGG | 0.533859 | 8_4:+7177599 | Msa1310560:CDS |
| TGCAAAGAGATGGATGCTGC+TGG | 0.538901 | 8_4:+7174331 | Msa1310560:CDS |
| ATATCCAGCACCATTGGCAC+GGG | 0.540249 | 8_4:-7177432 | None:intergenic |
| AGGTTGCAGAAGCCAGGTAA+GGG | 0.540730 | 8_4:-7177577 | None:intergenic |
| TGATTACTTACATGTGCAGT+GGG | 0.544739 | 8_4:-7175196 | None:intergenic |
| GGGACCATATCCAGCACCAT+TGG | 0.544844 | 8_4:-7177438 | None:intergenic |
| TTTCCAAAGATATCAAGGAT+AGG | 0.546279 | 8_4:+7174605 | Msa1310560:CDS |
| AAAAGGAATGTTAGTGACAC+GGG | 0.552784 | 8_4:-7177459 | None:intergenic |
| TATTCACCATTGTAGATGCT+CGG | 0.553561 | 8_4:+7174119 | Msa1310560:CDS |
| ATGTCCGCACTTACATTCGC+AGG | 0.553714 | 8_4:-7174280 | None:intergenic |
| TGAAGAGTGGAAACCGAGAT+TGG | 0.553968 | 8_4:+7174642 | Msa1310560:CDS |
| TGGATCATTCGTTTCTGGAG+AGG | 0.556696 | 8_4:-7177344 | None:intergenic |
| TGGCGACGCCGAGATACCAT+TGG | 0.556801 | 8_4:-7174784 | None:intergenic |
| TAAAGGAAGAGTTACCTGAA+TGG | 0.560293 | 8_4:-7172723 | None:intergenic |
| TCTCCGACAACCCAAGGCAT+CGG | 0.560595 | 8_4:-7174822 | None:intergenic |
| CATGATGTCTTATCCAGAGT+TGG | 0.562460 | 8_4:+7174300 | Msa1310560:CDS |
| CTCCTCCTCATTAAAATCAG+AGG | 0.562931 | 8_4:-7174746 | None:intergenic |
| TAGCAACGGGAATTCCTTGG+AGG | 0.564367 | 8_4:+7174684 | Msa1310560:CDS |
| GCTGTGTCCACTAGGGCTGA+AGG | 0.565201 | 8_4:+7174232 | Msa1310560:CDS |
| CAAAGGCAGTTGCTGAAGAG+TGG | 0.567875 | 8_4:+7174629 | Msa1310560:CDS |
| CTCTCTAGAAATGCAACCCT+AGG | 0.568844 | 8_4:-7172642 | None:intergenic |
| GTTTAGCTTCTTTACTATGG+AGG | 0.571609 | 8_4:+7173790 | Msa1310560:intron |
| GGGTTGTCGGAGAAGATGCC+TGG | 0.574174 | 8_4:+7174832 | Msa1310560:CDS |
| GCATCTTCTCCGACAACCCA+AGG | 0.575983 | 8_4:-7174828 | None:intergenic |
| CATATCCAGCACCATTGGCA+CGG | 0.577716 | 8_4:-7177433 | None:intergenic |
| TGAAGGAAAGAAAATAAGAG+AGG | 0.578557 | 8_4:-7172698 | None:intergenic |
| GATGTTGCCTTCAGCCCTAG+TGG | 0.578689 | 8_4:-7174239 | None:intergenic |
| CCTTGCTGCAGAGACTTCAA+AGG | 0.579253 | 8_4:+7174080 | Msa1310560:CDS |
| ATGTCAAGAGCATCCAATCT+CGG | 0.581756 | 8_4:-7174655 | None:intergenic |
| ATACAGGAAGGTTTCATCAA+AGG | 0.582776 | 8_4:+7174147 | Msa1310560:CDS |
| GGTAAAGCTATGCAAAGAGA+TGG | 0.582969 | 8_4:+7174321 | Msa1310560:CDS |
| CAAAAGGAATGTTAGTGACA+CGG | 0.586475 | 8_4:-7177460 | None:intergenic |
| AGGCCAAGGCCGATAAGAAG+AGG | 0.587218 | 8_4:+7177375 | Msa1310560:CDS |
| TGTGGATGCTGTGTCCACTA+GGG | 0.588731 | 8_4:+7174225 | Msa1310560:CDS |
| ACGAATGATCCAACTAGAGA+AGG | 0.590829 | 8_4:+7177355 | Msa1310560:CDS |
| TTGGTGCTGGGTACATGTAA+GGG | 0.592432 | 8_4:-7177538 | None:intergenic |
| TCAAGCGGCACCAGATGTCA+AGG | 0.595899 | 8_4:+7174195 | Msa1310560:CDS |
| ATCTCCACTAATTAGAGAGA+CGG | 0.599096 | 8_4:+7177660 | Msa1310560:exon |
| CCTGTCAGCAACTCTAGCAT+AGG | 0.600312 | 8_4:-7177492 | None:intergenic |
| GGTTGCAGAAGCCAGGTAAG+GGG | 0.600375 | 8_4:-7177576 | None:intergenic |
| CCTATGCTAGAGTTGCTGAC+AGG | 0.601789 | 8_4:+7177492 | Msa1310560:CDS |
| GGCTGGAGAAATCCTTGAAG+AGG | 0.602202 | 8_4:+7173951 | Msa1310560:CDS |
| TCAAGTTAAGAGTAACAGCT+CGG | 0.607083 | 8_4:-7173898 | None:intergenic |
| CTAGTGGACACAGCATCCAC+AGG | 0.607123 | 8_4:-7174223 | None:intergenic |
| GTTATCCAGGCTAATTCCAA+TGG | 0.607375 | 8_4:+7174768 | Msa1310560:CDS |
| AAAGATACAACAGCTGCAGA+AGG | 0.613139 | 8_4:+7173853 | Msa1310560:CDS |
| AGATATCAAGGATAGGGCAA+AGG | 0.614440 | 8_4:+7174612 | Msa1310560:CDS |
| ATGATTACTTACATGTGCAG+TGG | 0.617020 | 8_4:-7175197 | None:intergenic |
| CTTGACATGGATGCTAGCAA+CGG | 0.618939 | 8_4:+7174670 | Msa1310560:CDS |
| GCAAGAACCTTGCTGCTGTG+AGG | 0.621104 | 8_4:+7174380 | Msa1310560:CDS |
| TTTCTTCCCTCACAGCAGCA+AGG | 0.623673 | 8_4:-7174387 | None:intergenic |
| GGCCAAGGCCGATAAGAAGA+GGG | 0.624405 | 8_4:+7177376 | Msa1310560:CDS |
| GAGTTACCTGAATGGTGTGA+AGG | 0.626230 | 8_4:-7172715 | None:intergenic |
| GGAGCAGCTCTTAATGCAAG+TGG | 0.626965 | 8_4:-7174412 | None:intergenic |
| AATGATAGAGAAACAGGAAG+CGG | 0.629888 | 8_4:+7174036 | Msa1310560:CDS |
| TTCTCCTGCGAATGTAAGTG+CGG | 0.639910 | 8_4:+7174276 | Msa1310560:CDS |
| CTTGAAATGGAAAGAACTCG+AGG | 0.646861 | 8_4:+7173916 | Msa1310560:CDS |
| TGTCTTTAATGGGAGTCAAG+CGG | 0.649347 | 8_4:+7174180 | Msa1310560:CDS |
| GAGATTGGATGCTCTTGACA+TGG | 0.651190 | 8_4:+7174657 | Msa1310560:CDS |
| TTCAGGTAAGACTTAAGCAG+AGG | 0.652723 | 8_4:-7175127 | None:intergenic |
| GATCCAACTAGAGAAGGCCA+AGG | 0.660945 | 8_4:+7177361 | Msa1310560:CDS |
| GTGCTGGGTACATGTAAGGG+CGG | 0.678615 | 8_4:-7177535 | None:intergenic |
| AAGAGTTTGAAAACAAGACG+AGG | 0.680352 | 8_4:+7174002 | Msa1310560:CDS |
| AGATGTCAAGGAGAAACCTG+TGG | 0.686737 | 8_4:+7174207 | Msa1310560:CDS |
| AGACGGTGAACTGATAACAA+TGG | 0.703914 | 8_4:+7177677 | Msa1310560:three_prime_UTR |
| TATCCAGCACCATTGGCACG+GGG | 0.708155 | 8_4:-7177431 | None:intergenic |
| AAAGGAATGTTAGTGACACG+GGG | 0.750041 | 8_4:-7177458 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATATTTTTAGAATAGT+AGG | + | chr8_4:7175377-7175396 | Msa1310560:intron | 10.0% |
| !!! | ATAATATTTTTAGAATAGTA+GGG | + | chr8_4:7175378-7175397 | Msa1310560:intron | 10.0% |
| !! | AATCTATTAATAAAATATAG+AGG | + | chr8_4:7176092-7176111 | Msa1310560:intron | 10.0% |
| !!! | TTATGTTAAAATTTTAACTT+CGG | + | chr8_4:7177797-7177816 | Msa1310560:three_prime_UTR | 10.0% |
| !!! | TTTAGGGTTTTTTTAATTTT+TGG | + | chr8_4:7172806-7172825 | Msa1310560:intron | 15.0% |
| !!! | TAGTTTATGATTTTAGAATT+AGG | + | chr8_4:7172909-7172928 | Msa1310560:intron | 15.0% |
| !!! | AGTTTATGATTTTAGAATTA+GGG | + | chr8_4:7172910-7172929 | Msa1310560:intron | 15.0% |
| !! | ATTTCTTCAATTAAGATTAT+TGG | + | chr8_4:7173074-7173093 | Msa1310560:intron | 15.0% |
| !! | TTTCTTCAATTAAGATTATT+GGG | + | chr8_4:7173075-7173094 | Msa1310560:intron | 15.0% |
| !!! | ACTTTTTTTTTTTTATCAGT+AGG | + | chr8_4:7173647-7173666 | Msa1310560:intron | 15.0% |
| !! | ATTGTCAATATGAAATATTA+AGG | + | chr8_4:7175327-7175346 | Msa1310560:intron | 15.0% |
| !! | ATTAATAAAATATAGAGGAA+TGG | + | chr8_4:7176097-7176116 | Msa1310560:intron | 15.0% |
| !! | CTTAAGACTAAATATTAATA+GGG | - | chr8_4:7177704-7177723 | None:intergenic | 15.0% |
| !! | ACTTAAGACTAAATATTAAT+AGG | - | chr8_4:7177705-7177724 | None:intergenic | 15.0% |
| !!! | TTAATTTTTGGTTTTTTCGT+TGG | + | chr8_4:7172818-7172837 | Msa1310560:intron | 20.0% |
| !! | TTGTTGTGATAATACTTATT+TGG | + | chr8_4:7172875-7172894 | Msa1310560:intron | 20.0% |
| !!! | GTTTATGATTTTAGAATTAG+GGG | + | chr8_4:7172911-7172930 | Msa1310560:intron | 20.0% |
| !! | TTCTTCAATTAAGATTATTG+GGG | + | chr8_4:7173076-7173095 | Msa1310560:intron | 20.0% |
| !!! | ACTTTTACATAAACACTTAA+GGG | - | chr8_4:7173293-7173312 | None:intergenic | 20.0% |
| !!! | AACTTTTACATAAACACTTA+AGG | - | chr8_4:7173294-7173313 | None:intergenic | 20.0% |
| !! | TTGTGCATAAAAAAAAATCT+AGG | - | chr8_4:7173556-7173575 | None:intergenic | 20.0% |
| !!! | TGTAGCTAAACTTTTTTTAT+CGG | - | chr8_4:7173601-7173620 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGTTTAGCTACA+GGG | + | chr8_4:7173601-7173620 | Msa1310560:intron | 20.0% |
| !! | AAAAATGAACATGAGATAAT+TGG | - | chr8_4:7174903-7174922 | None:intergenic | 20.0% |
| !!! | ATTAAAGTTTTGGTAAACAA+TGG | + | chr8_4:7175040-7175059 | Msa1310560:CDS | 20.0% |
| !!! | TTAAAGTTTTGGTAAACAAT+GGG | + | chr8_4:7175041-7175060 | Msa1310560:CDS | 20.0% |
| !!! | AGACATAATTTTTGATGAAA+AGG | + | chr8_4:7175783-7175802 | Msa1310560:intron | 20.0% |
| !!! | TAAAGTATTTGAGAGAAATT+TGG | + | chr8_4:7175962-7175981 | Msa1310560:intron | 20.0% |
| !!! | AAAGTATTTGAGAGAAATTT+GGG | + | chr8_4:7175963-7175982 | Msa1310560:intron | 20.0% |
| !! | TCTATCTTAATCTTTATGTT+TGG | + | chr8_4:7176321-7176340 | Msa1310560:intron | 20.0% |
| !!! | CATTCTTTTAGTAGATATAA+TGG | + | chr8_4:7176890-7176909 | Msa1310560:intron | 20.0% |
| !!! | TATTTTGGAGCATAAAAATA+AGG | - | chr8_4:7177145-7177164 | None:intergenic | 20.0% |
| !! | ATAACATTTCACATGTTTAA+GGG | - | chr8_4:7177781-7177800 | None:intergenic | 20.0% |
| ! | AATGAAAGAGAGAGAAATAA+AGG | - | chr8_4:7172743-7172762 | None:intergenic | 25.0% |
| ! | AAAACCCTAAAATGAAAAAG+CGG | - | chr8_4:7172797-7172816 | None:intergenic | 25.0% |
| ! | ATCAATTAAGATAGCAAGAT+TGG | - | chr8_4:7172973-7172992 | None:intergenic | 25.0% |
| !! | ATATTTACAAGCTGATTCTA+GGG | - | chr8_4:7173023-7173042 | None:intergenic | 25.0% |
| ! | CTCATTTGACTAAAAAAGAT+CGG | - | chr8_4:7173229-7173248 | None:intergenic | 25.0% |
| !! | CAATGTTAGTTTAGATATAG+TGG | + | chr8_4:7173573-7173592 | Msa1310560:intron | 25.0% |
| !!! | TAGCTAAACTTTTTTTATCG+GGG | - | chr8_4:7173599-7173618 | None:intergenic | 25.0% |
| !!! | GTAGCTAAACTTTTTTTATC+GGG | - | chr8_4:7173600-7173619 | None:intergenic | 25.0% |
| ! | GATAAAAAAAGTTTAGCTAC+AGG | + | chr8_4:7173600-7173619 | Msa1310560:intron | 25.0% |
| ! | GTTTATGATATTATATGCAG+TGG | + | chr8_4:7173623-7173642 | Msa1310560:intron | 25.0% |
| !! | TTTGTTTAGCTTCTTTACTA+TGG | + | chr8_4:7173787-7173806 | Msa1310560:intron | 25.0% |
| !! | TTTGGAAGGATTTTATTGTA+CGG | + | chr8_4:7174462-7174481 | Msa1310560:CDS | 25.0% |
| !! | TTATGAAAAAGTTGTTTCCT+TGG | + | chr8_4:7174948-7174967 | Msa1310560:intron | 25.0% |
| !! | TATGAAAAAGTTGTTTCCTT+GGG | + | chr8_4:7174949-7174968 | Msa1310560:intron | 25.0% |
| ! | AAATCATTTAAAGAAACCCA+AGG | - | chr8_4:7174968-7174987 | None:intergenic | 25.0% |
| ! | TAGTAATGTGCAAAATTGTT+TGG | + | chr8_4:7175522-7175541 | Msa1310560:intron | 25.0% |
| !! | AACATTCTCGATTTTTCTAT+TGG | + | chr8_4:7175556-7175575 | Msa1310560:intron | 25.0% |
| ! | TGGATGTAAAATAGAGTTTA+TGG | + | chr8_4:7175588-7175607 | Msa1310560:intron | 25.0% |
| !! | TATATGGAATGTAAGTTTTG+CGG | + | chr8_4:7175636-7175655 | Msa1310560:intron | 25.0% |
| ! | GAATAGTAGATGTAAATCAT+AGG | + | chr8_4:7175740-7175759 | Msa1310560:intron | 25.0% |
| ! | TAAGACCTGTATTAATGTAT+AGG | + | chr8_4:7175836-7175855 | Msa1310560:intron | 25.0% |
| ! | TCAATCCTATACATTAATAC+AGG | - | chr8_4:7175844-7175863 | None:intergenic | 25.0% |
| !! | AACTGAATTGACTTTCTTAT+AGG | - | chr8_4:7175885-7175904 | None:intergenic | 25.0% |
| ! | AAGTATTTGAGAGAAATTTG+GGG | + | chr8_4:7175964-7175983 | Msa1310560:intron | 25.0% |
| ! | TAGTAGTATTGCAAATAAGT+TGG | + | chr8_4:7175987-7176006 | Msa1310560:intron | 25.0% |
| ! | CATTGAATAATGTCAAAAGA+TGG | - | chr8_4:7176176-7176195 | None:intergenic | 25.0% |
| !! | CTTTTGACATTATTCAATGT+AGG | + | chr8_4:7176177-7176196 | Msa1310560:intron | 25.0% |
| ! | TTATTCAATGTAGGACATTA+TGG | + | chr8_4:7176186-7176205 | Msa1310560:intron | 25.0% |
| ! | ATCTTAATCTTTATGTTTGG+TGG | + | chr8_4:7176324-7176343 | Msa1310560:intron | 25.0% |
| !! | TTTTACAGCACTCTAATTTT+TGG | - | chr8_4:7177005-7177024 | None:intergenic | 25.0% |
| !!! | ATTTATTTGGTGTTTTTGAC+AGG | + | chr8_4:7177118-7177137 | Msa1310560:intron | 25.0% |
| ! | CAAAGATGAATATTGAAGAT+AGG | - | chr8_4:7177180-7177199 | None:intergenic | 25.0% |
| ! | TCAATATTCATCTTTGTGTT+TGG | + | chr8_4:7177184-7177203 | Msa1310560:intron | 25.0% |
| ! | CATAACATTTCACATGTTTA+AGG | - | chr8_4:7177782-7177801 | None:intergenic | 25.0% |
| TGAAGGAAAGAAAATAAGAG+AGG | - | chr8_4:7172701-7172720 | None:intergenic | 30.0% | |
| !!! | TAGATCCGCTTTTTCATTTT+AGG | + | chr8_4:7172789-7172808 | Msa1310560:intron | 30.0% |
| !!! | AGATCCGCTTTTTCATTTTA+GGG | + | chr8_4:7172790-7172809 | Msa1310560:intron | 30.0% |
| ! | CATATTTACAAGCTGATTCT+AGG | - | chr8_4:7173024-7173043 | None:intergenic | 30.0% |
| TTGACTAAAAAAGATCGGTT+TGG | - | chr8_4:7173224-7173243 | None:intergenic | 30.0% | |
| ATAAGCCATAACCTCAAAAA+TGG | + | chr8_4:7173252-7173271 | Msa1310560:intron | 30.0% | |
| TAAGCCATAACCTCAAAAAT+GGG | + | chr8_4:7173253-7173272 | Msa1310560:intron | 30.0% | |
| !! | GCTGTTTTCATAAGCTATAT+TGG | + | chr8_4:7173366-7173385 | Msa1310560:intron | 30.0% |
| ! | CTGTTACTCTTAACTTGAAA+TGG | + | chr8_4:7173903-7173922 | Msa1310560:CDS | 30.0% |
| ! | TGTTTTCAAACTCTTTCTCT+TGG | - | chr8_4:7173997-7174016 | None:intergenic | 30.0% |
| !!! | CTGTCTAGTTTTAGATTCTT+TGG | + | chr8_4:7174444-7174463 | Msa1310560:CDS | 30.0% |
| !!! | CTAGTTTTAGATTCTTTGGA+AGG | + | chr8_4:7174448-7174467 | Msa1310560:CDS | 30.0% |
| GTCAAGTCAGGATATAAAAA+AGG | + | chr8_4:7174489-7174508 | Msa1310560:CDS | 30.0% | |
| ATTAGAAACAGAACCCAAAT+TGG | - | chr8_4:7174581-7174600 | None:intergenic | 30.0% | |
| TGTGATTTCCAAAGATATCA+AGG | + | chr8_4:7174600-7174619 | Msa1310560:CDS | 30.0% | |
| TTTCCAAAGATATCAAGGAT+AGG | + | chr8_4:7174605-7174624 | Msa1310560:CDS | 30.0% | |
| TTCCAAAGATATCAAGGATA+GGG | + | chr8_4:7174606-7174625 | Msa1310560:CDS | 30.0% | |
| !! | TATTGCCTCTGATTTTAATG+AGG | + | chr8_4:7174741-7174760 | Msa1310560:CDS | 30.0% |
| GAGATAATTGGATGAAAACT+TGG | - | chr8_4:7174891-7174910 | None:intergenic | 30.0% | |
| !! | TCATTTTACTTTTGATGTGC+AGG | + | chr8_4:7175013-7175032 | Msa1310560:intron | 30.0% |
| ! | AAGTTTTCTTAGCATCATTC+AGG | - | chr8_4:7175147-7175166 | None:intergenic | 30.0% |
| CATGAATAGAAAACAACAGT+AGG | - | chr8_4:7175224-7175243 | None:intergenic | 30.0% | |
| ATTAAGGTTGTTAGTTGCAA+AGG | + | chr8_4:7175343-7175362 | Msa1310560:intron | 30.0% | |
| ! | TTTTCTATTGGATTCTCTTG+TGG | + | chr8_4:7175568-7175587 | Msa1310560:intron | 30.0% |
| TCATGTAGAAGTAGAGTATA+TGG | + | chr8_4:7175620-7175639 | Msa1310560:intron | 30.0% | |
| ! | ATATGGAATGTAAGTTTTGC+GGG | + | chr8_4:7175637-7175656 | Msa1310560:intron | 30.0% |
| ! | TTCTTAATGATTTGGCCTAT+AGG | - | chr8_4:7176134-7176153 | None:intergenic | 30.0% |
| TATAGGCCAAATCATTAAGA+AGG | + | chr8_4:7176133-7176152 | Msa1310560:intron | 30.0% | |
| CCAAATCCTTCTTAATGATT+TGG | - | chr8_4:7176142-7176161 | None:intergenic | 30.0% | |
| CCAAATCATTAAGAAGGATT+TGG | + | chr8_4:7176139-7176158 | Msa1310560:intron | 30.0% | |
| AGATAGAAACTAGTGAAACT+AGG | - | chr8_4:7176308-7176327 | None:intergenic | 30.0% | |
| !! | TTGCTTTAAGTTGAATTCCT+AGG | + | chr8_4:7176363-7176382 | Msa1310560:intron | 30.0% |
| !! | TGCTTTAAGTTGAATTCCTA+GGG | + | chr8_4:7176364-7176383 | Msa1310560:intron | 30.0% |
| ATACTATATGTAGGAGACTT+TGG | - | chr8_4:7176505-7176524 | None:intergenic | 30.0% | |
| TAGCAGTATATGTGATAGTA+GGG | - | chr8_4:7176573-7176592 | None:intergenic | 30.0% | |
| TTAGCAGTATATGTGATAGT+AGG | - | chr8_4:7176574-7176593 | None:intergenic | 30.0% | |
| TTAGACTAGGAAATAACTAG+TGG | - | chr8_4:7176637-7176656 | None:intergenic | 30.0% | |
| AGTTCTATAAATCACTGTGA+TGG | - | chr8_4:7176743-7176762 | None:intergenic | 30.0% | |
| CTACTAAAAGAATGAGATTG+TGG | - | chr8_4:7176884-7176903 | None:intergenic | 30.0% | |
| ACTAATGCAATTGGAAGAAT+GGG | + | chr8_4:7176962-7176981 | Msa1310560:intron | 30.0% | |
| !! | AGAGTAGAGAAGCATTTATT+TGG | + | chr8_4:7177105-7177124 | Msa1310560:intron | 30.0% |
| ! | AGGCAATGTTGTAGTTATTT+TGG | - | chr8_4:7177160-7177179 | None:intergenic | 30.0% |
| TTCATCTTTGTGTTTGGTTA+TGG | + | chr8_4:7177190-7177209 | Msa1310560:intron | 30.0% | |
| TTCTTCAATGCACTTGATTA+TGG | - | chr8_4:7177294-7177313 | None:intergenic | 30.0% | |
| TACAACATACAACAGCTTAA+GGG | - | chr8_4:7177733-7177752 | None:intergenic | 30.0% | |
| !! | TAACAGAGTTGATACATTAG+AGG | - | chr8_4:7177842-7177861 | None:intergenic | 30.0% |
| TCGACAGACTCAAATTAAAT+AGG | - | chr8_4:7177920-7177939 | None:intergenic | 30.0% | |
| ! | CTTTTTCTTTCTCTCTCCTA+GGG | + | chr8_4:7172626-7172645 | Msa1310560:five_prime_UTR | 35.0% |
| ! | TTGCATTTCTAGAGAGAGAA+TGG | + | chr8_4:7172649-7172668 | Msa1310560:five_prime_UTR | 35.0% |
| TAAAGGAAGAGTTACCTGAA+TGG | - | chr8_4:7172726-7172745 | None:intergenic | 35.0% | |
| ACAAGCTTGTGTGAAAATGA+TGG | + | chr8_4:7173195-7173214 | Msa1310560:intron | 35.0% | |
| TAAACACTTAAGGGTCTGTT+TGG | - | chr8_4:7173284-7173303 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTAATGCTGTTT+GGG | - | chr8_4:7173456-7173475 | None:intergenic | 35.0% |
| ! | AAGCACTTGTAATGCTGTTT+GGG | - | chr8_4:7173456-7173475 | None:intergenic | 35.0% |
| TAAGCACTTGTAATGCTGTT+TGG | - | chr8_4:7173495-7173514 | None:intergenic | 35.0% | |
| TCAAACAAGCCAGTCTAAAT+AGG | + | chr8_4:7173530-7173549 | Msa1310560:intron | 35.0% | |
| AAATCTAGGCCTATTTAGAC+TGG | - | chr8_4:7173542-7173561 | None:intergenic | 35.0% | |
| TTATCAGTAGGAGTTGAACT+CGG | + | chr8_4:7173659-7173678 | Msa1310560:intron | 35.0% | |
| ! | GTTTAGCTTCTTTACTATGG+AGG | + | chr8_4:7173790-7173809 | Msa1310560:intron | 35.0% |
| TCAAGTTAAGAGTAACAGCT+CGG | - | chr8_4:7173901-7173920 | None:intergenic | 35.0% | |
| ! | AACTCGAGGAACATTTTCAA+GGG | + | chr8_4:7173930-7173949 | Msa1310560:CDS | 35.0% |
| TTCATTAAAACGCCTCTTCA+AGG | - | chr8_4:7173966-7173985 | None:intergenic | 35.0% | |
| AAGAGTTTGAAAACAAGACG+AGG | + | chr8_4:7174002-7174021 | Msa1310560:CDS | 35.0% | |
| TCGAGAAATGATAGAGAAAC+AGG | + | chr8_4:7174030-7174049 | Msa1310560:CDS | 35.0% | |
| AATGATAGAGAAACAGGAAG+CGG | + | chr8_4:7174036-7174055 | Msa1310560:CDS | 35.0% | |
| TATTCACCATTGTAGATGCT+CGG | + | chr8_4:7174119-7174138 | Msa1310560:CDS | 35.0% | |
| !!! | TTTTTTCCGAGCATCTACAA+TGG | - | chr8_4:7174128-7174147 | None:intergenic | 35.0% |
| TAGATGCTCGGAAAAAATAC+AGG | + | chr8_4:7174131-7174150 | Msa1310560:CDS | 35.0% | |
| ATACAGGAAGGTTTCATCAA+AGG | + | chr8_4:7174147-7174166 | Msa1310560:CDS | 35.0% | |
| ACTTGGCTACTGTCTTTAAT+GGG | + | chr8_4:7174170-7174189 | Msa1310560:CDS | 35.0% | |
| ! | AAAAAAGGATGCTAACTTGC+TGG | + | chr8_4:7174504-7174523 | Msa1310560:CDS | 35.0% |
| !! | AAAAAGGATGCTAACTTGCT+GGG | + | chr8_4:7174505-7174524 | Msa1310560:CDS | 35.0% |
| ACATTCCAGTAACATGATAC+TGG | - | chr8_4:7174542-7174561 | None:intergenic | 35.0% | |
| AAGTGATTTCCTGACCAATT+TGG | + | chr8_4:7174564-7174583 | Msa1310560:CDS | 35.0% | |
| AGTGATTTCCTGACCAATTT+GGG | + | chr8_4:7174565-7174584 | Msa1310560:CDS | 35.0% | |
| ACTAGCTAGAAGTTGCAAAA+AGG | - | chr8_4:7174716-7174735 | None:intergenic | 35.0% | |
| !! | TTGCAACTTCTAGCTAGTTT+TGG | + | chr8_4:7174718-7174737 | Msa1310560:CDS | 35.0% |
| ! | TGCAGGTGTGATTAAAGTTT+TGG | + | chr8_4:7175030-7175049 | Msa1310560:intron | 35.0% |
| !! | AAGTTTTGGTAAACAATGGG+AGG | + | chr8_4:7175044-7175063 | Msa1310560:CDS | 35.0% |
| GCAAATTGATGCTGTTAACT+TGG | + | chr8_4:7175066-7175085 | Msa1310560:CDS | 35.0% | |
| TAAGACTTAAGCAGAGGAAT+AGG | - | chr8_4:7175124-7175143 | None:intergenic | 35.0% | |
| TGATTACTTACATGTGCAGT+GGG | - | chr8_4:7175199-7175218 | None:intergenic | 35.0% | |
| ATGATTACTTACATGTGCAG+TGG | - | chr8_4:7175200-7175219 | None:intergenic | 35.0% | |
| TGTTTGTCCAGTTGTAATTG+AGG | + | chr8_4:7175283-7175302 | Msa1310560:intron | 35.0% | |
| TAGGGATATATTGTCCAATC+AGG | + | chr8_4:7175396-7175415 | Msa1310560:intron | 35.0% | |
| !! | CAATAAGAAGAGTACCTGAT+TGG | - | chr8_4:7175413-7175432 | None:intergenic | 35.0% |
| ATCAGGTACTCTTCTTATTG+AGG | + | chr8_4:7175413-7175432 | Msa1310560:intron | 35.0% | |
| TTCTACTCCACTATGGTTAA+TGG | + | chr8_4:7175472-7175491 | Msa1310560:intron | 35.0% | |
| GTAAATCATAGGATTCATGC+AGG | + | chr8_4:7175751-7175770 | Msa1310560:intron | 35.0% | |
| GAAAGTCAATTCAGTTAGAC+AGG | + | chr8_4:7175889-7175908 | Msa1310560:intron | 35.0% | |
| GTGGTCATACAAGATAAGAT+AGG | + | chr8_4:7175931-7175950 | Msa1310560:intron | 35.0% | |
| !! | GTATTGCAAATAAGTTGGTG+AGG | + | chr8_4:7175992-7176011 | Msa1310560:intron | 35.0% |
| ATGGAGAAACACAATCCTAT+AGG | + | chr8_4:7176116-7176135 | Msa1310560:intron | 35.0% | |
| GTTGACTACATAGATCATCA+GGG | - | chr8_4:7176213-7176232 | None:intergenic | 35.0% | |
| TTCCTCTGTTCTCTAACAAA+TGG | - | chr8_4:7176267-7176286 | None:intergenic | 35.0% | |
| AATTCCTAGGGTCATATTGT+GGG | + | chr8_4:7176376-7176395 | Msa1310560:intron | 35.0% | |
| ATCTCGAAGATAATGTGATG+TGG | + | chr8_4:7176409-7176428 | Msa1310560:intron | 35.0% | |
| TCTCGAAGATAATGTGATGT+GGG | + | chr8_4:7176410-7176429 | Msa1310560:intron | 35.0% | |
| TGCGTGACGATATAACTATT+TGG | - | chr8_4:7176450-7176469 | None:intergenic | 35.0% | |
| TTCCTAGTCTAACTTACATC+AGG | + | chr8_4:7176645-7176664 | Msa1310560:intron | 35.0% | |
| CTAGACTGCATAAAAATAGC+AGG | - | chr8_4:7176679-7176698 | None:intergenic | 35.0% | |
| TTCTTCCAATTGCATTAGTG+TGG | - | chr8_4:7176961-7176980 | None:intergenic | 35.0% | |
| CACTAATGCAATTGGAAGAA+TGG | + | chr8_4:7176961-7176980 | Msa1310560:intron | 35.0% | |
| CTAATGCAATTGGAAGAATG+GGG | + | chr8_4:7176963-7176982 | Msa1310560:intron | 35.0% | |
| TATCGTCTTGAATTGCCTTA+AGG | + | chr8_4:7177065-7177084 | Msa1310560:intron | 35.0% | |
| ATGCATTTGATGCATCCTTA+AGG | - | chr8_4:7177083-7177102 | None:intergenic | 35.0% | |
| TTCAGTTTCCCTCTTCTTAT+CGG | - | chr8_4:7177387-7177406 | None:intergenic | 35.0% | |
| AAAAGGAATGTTAGTGACAC+GGG | - | chr8_4:7177462-7177481 | None:intergenic | 35.0% | |
| CAAAAGGAATGTTAGTGACA+CGG | - | chr8_4:7177463-7177482 | None:intergenic | 35.0% | |
| !! | GCATAGGAAGTTTTGTCAAA+AGG | - | chr8_4:7177479-7177498 | None:intergenic | 35.0% |
| GGAGATATGTAGCTTGATAT+TGG | - | chr8_4:7177646-7177665 | None:intergenic | 35.0% | |
| ATCTCCACTAATTAGAGAGA+CGG | + | chr8_4:7177660-7177679 | Msa1310560:exon | 35.0% | |
| GTACAACATACAACAGCTTA+AGG | - | chr8_4:7177734-7177753 | None:intergenic | 35.0% | |
| AGAGAGAAAGAAAAAGGAGG+AGG | - | chr8_4:7172622-7172641 | None:intergenic | 40.0% | |
| AGGAGAGAGAAAGAAAAAGG+AGG | - | chr8_4:7172625-7172644 | None:intergenic | 40.0% | |
| CCTAGGAGAGAGAAAGAAAA+AGG | - | chr8_4:7172628-7172647 | None:intergenic | 40.0% | |
| ! | CCTTTTTCTTTCTCTCTCCT+AGG | + | chr8_4:7172625-7172644 | Msa1310560:five_prime_UTR | 40.0% |
| TTCTTTCCTTCACACCATTC+AGG | + | chr8_4:7172709-7172728 | Msa1310560:five_prime_UTR | 40.0% | |
| !!! | AGGACCCATTTTTGAGGTTA+TGG | - | chr8_4:7173260-7173279 | None:intergenic | 40.0% |
| !! | TTTGGAAGGACCCATTTTTG+AGG | - | chr8_4:7173266-7173285 | None:intergenic | 40.0% |
| ! | ATGCTGTTTGGGACAACTTA+CGG | - | chr8_4:7173445-7173464 | None:intergenic | 40.0% |
| CAAGCACTTGTAATGCTGTT+TGG | - | chr8_4:7173457-7173476 | None:intergenic | 40.0% | |
| ! | ATGCTGTTTGGGACAACTTA+CGG | - | chr8_4:7173445-7173464 | None:intergenic | 40.0% |
| GCTTGTTTGAGCTTATCTAC+TGG | - | chr8_4:7173520-7173539 | None:intergenic | 40.0% | |
| CTTCTTTACTATGGAGGACA+AGG | + | chr8_4:7173796-7173815 | Msa1310560:exon | 40.0% | |
| AAAGATACAACAGCTGCAGA+AGG | + | chr8_4:7173853-7173872 | Msa1310560:CDS | 40.0% | |
| CTTGAAATGGAAAGAACTCG+AGG | + | chr8_4:7173916-7173935 | Msa1310560:CDS | 40.0% | |
| ! | GAACTCGAGGAACATTTTCA+AGG | + | chr8_4:7173929-7173948 | Msa1310560:CDS | 40.0% |
| !!! | GAAGAGGCGTTTTAATGAAC+TGG | + | chr8_4:7173967-7173986 | Msa1310560:CDS | 40.0% |
| TGCTCGGAAAAAATACAGGA+AGG | + | chr8_4:7174135-7174154 | Msa1310560:CDS | 40.0% | |
| GAAGGTTTCATCAAAGGACT+TGG | + | chr8_4:7174153-7174172 | Msa1310560:CDS | 40.0% | |
| GACTTGGCTACTGTCTTTAA+TGG | + | chr8_4:7174169-7174188 | Msa1310560:CDS | 40.0% | |
| TGTCTTTAATGGGAGTCAAG+CGG | + | chr8_4:7174180-7174199 | Msa1310560:CDS | 40.0% | |
| CATGATGTCTTATCCAGAGT+TGG | + | chr8_4:7174300-7174319 | Msa1310560:CDS | 40.0% | |
| ! | TTGCATAGCTTTACCAACTC+TGG | - | chr8_4:7174316-7174335 | None:intergenic | 40.0% |
| GGTAAAGCTATGCAAAGAGA+TGG | + | chr8_4:7174321-7174340 | Msa1310560:CDS | 40.0% | |
| AAAACTAGACAGCCAGCATT+GGG | - | chr8_4:7174436-7174455 | None:intergenic | 40.0% | |
| TAAAACTAGACAGCCAGCAT+TGG | - | chr8_4:7174437-7174456 | None:intergenic | 40.0% | |
| ! | CCAGTAACATGATACTGGTT+CGG | - | chr8_4:7174537-7174556 | None:intergenic | 40.0% |
| AAACAGAACCCAAATTGGTC+AGG | - | chr8_4:7174576-7174595 | None:intergenic | 40.0% | |
| TGCCCTATCCTTGATATCTT+TGG | - | chr8_4:7174611-7174630 | None:intergenic | 40.0% | |
| AGATATCAAGGATAGGGCAA+AGG | + | chr8_4:7174612-7174631 | Msa1310560:CDS | 40.0% | |
| !! | ATGTCAAGAGCATCCAATCT+CGG | - | chr8_4:7174658-7174677 | None:intergenic | 40.0% |
| !! | TGCCTCTGATTTTAATGAGG+AGG | + | chr8_4:7174744-7174763 | Msa1310560:CDS | 40.0% |
| CTCCTCCTCATTAAAATCAG+AGG | - | chr8_4:7174749-7174768 | None:intergenic | 40.0% | |
| TTAATGAGGAGGAGTTATCC+AGG | + | chr8_4:7174755-7174774 | Msa1310560:CDS | 40.0% | |
| GTTATCCAGGCTAATTCCAA+TGG | + | chr8_4:7174768-7174787 | Msa1310560:CDS | 40.0% | |
| AGATACCATTGGAATTAGCC+TGG | - | chr8_4:7174776-7174795 | None:intergenic | 40.0% | |
| GGCTAATTCCAATGGTATCT+CGG | + | chr8_4:7174776-7174795 | Msa1310560:CDS | 40.0% | |
| ATCGGCATAAATCAGCAGTT+TGG | - | chr8_4:7174807-7174826 | None:intergenic | 40.0% | |
| TTCAGGTAAGACTTAAGCAG+AGG | - | chr8_4:7175130-7175149 | None:intergenic | 40.0% | |
| GATGAGTTAACACTCTTGAC+TGG | - | chr8_4:7175175-7175194 | None:intergenic | 40.0% | |
| TCTTATTGAGGAGTGATCTC+AGG | + | chr8_4:7175425-7175444 | Msa1310560:intron | 40.0% | |
| ACTCCACTATGGTTAATGGA+AGG | + | chr8_4:7175476-7175495 | Msa1310560:intron | 40.0% | |
| ATCTACTATTCCCCGTCATT+TGG | - | chr8_4:7175731-7175750 | None:intergenic | 40.0% | |
| TAGACAGGAGAATGCTATGA+AGG | + | chr8_4:7175904-7175923 | Msa1310560:intron | 40.0% | |
| AGAATGCTATGAAGGATGAG+TGG | + | chr8_4:7175912-7175931 | Msa1310560:intron | 40.0% | |
| !! | AGACCTATAAAAGCACCAGA+AGG | + | chr8_4:7176048-7176067 | Msa1310560:intron | 40.0% |
| !! | CTATAAAAGCACCAGAAGGA+GGG | + | chr8_4:7176052-7176071 | Msa1310560:intron | 40.0% |
| GGTTGACTACATAGATCATC+AGG | - | chr8_4:7176214-7176233 | None:intergenic | 40.0% | |
| ! | GTCCATTTGTTAGAGAACAG+AGG | + | chr8_4:7176262-7176281 | Msa1310560:intron | 40.0% |
| AGAAACTAGTGAAACTAGGC+TGG | - | chr8_4:7176304-7176323 | None:intergenic | 40.0% | |
| GAATTCCTAGGGTCATATTG+TGG | + | chr8_4:7176375-7176394 | Msa1310560:intron | 40.0% | |
| GGGCTCAGAATACTATATGT+AGG | - | chr8_4:7176514-7176533 | None:intergenic | 40.0% | |
| CTAGTGGCAGAACTACTTAA+TGG | - | chr8_4:7176621-7176640 | None:intergenic | 40.0% | |
| TGCCTGATGTAAGTTAGACT+AGG | - | chr8_4:7176650-7176669 | None:intergenic | 40.0% | |
| TCTAGTGCACTCCTTTCAAA+TGG | + | chr8_4:7176694-7176713 | Msa1310560:intron | 40.0% | |
| CTAGTGCACTCCTTTCAAAT+GGG | + | chr8_4:7176695-7176714 | Msa1310560:intron | 40.0% | |
| AGAACTTAGAAGCTCTATGC+TGG | + | chr8_4:7176757-7176776 | Msa1310560:intron | 40.0% | |
| GTTTGCCAGTATCTGTTGTA+TGG | + | chr8_4:7176840-7176859 | Msa1310560:intron | 40.0% | |
| GATATAATGGCAAGAGACTC+TGG | + | chr8_4:7176903-7176922 | Msa1310560:intron | 40.0% | |
| ACTACTGTGGTTGAAGTATG+TGG | + | chr8_4:7176929-7176948 | Msa1310560:intron | 40.0% | |
| ATGTGCCACACTAATGCAAT+TGG | + | chr8_4:7176953-7176972 | Msa1310560:intron | 40.0% | |
| CTAGTTGGATCATTCGTTTC+TGG | - | chr8_4:7177352-7177371 | None:intergenic | 40.0% | |
| ACGAATGATCCAACTAGAGA+AGG | + | chr8_4:7177355-7177374 | Msa1310560:CDS | 40.0% | |
| AAAGGAATGTTAGTGACACG+GGG | - | chr8_4:7177461-7177480 | None:intergenic | 40.0% | |
| !! | AGTGATTTTCAGTTGGTGCT+GGG | - | chr8_4:7177553-7177572 | None:intergenic | 40.0% |
| AGGATTAGGAGAGACGTTAT+AGG | - | chr8_4:7177600-7177619 | None:intergenic | 40.0% | |
| TATAACGTCTCTCCTAATCC+TGG | + | chr8_4:7177599-7177618 | Msa1310560:CDS | 40.0% | |
| CCAAAGTAAGTTCCAGGATT+AGG | - | chr8_4:7177614-7177633 | None:intergenic | 40.0% | |
| CCTAATCCTGGAACTTACTT+TGG | + | chr8_4:7177611-7177630 | Msa1310560:CDS | 40.0% | |
| CCATTTCCAAAGTAAGTTCC+AGG | - | chr8_4:7177620-7177639 | None:intergenic | 40.0% | |
| ! | CCTGGAACTTACTTTGGAAA+TGG | + | chr8_4:7177617-7177636 | Msa1310560:CDS | 40.0% |
| TTCACCGTCTCTCTAATTAG+TGG | - | chr8_4:7177667-7177686 | None:intergenic | 40.0% | |
| AGACGGTGAACTGATAACAA+TGG | + | chr8_4:7177677-7177696 | Msa1310560:three_prime_UTR | 40.0% | |
| GAGAAAGAAAAAGGAGGAGG+AGG | - | chr8_4:7172619-7172638 | None:intergenic | 45.0% | |
| ! | CTCTCTAGAAATGCAACCCT+AGG | - | chr8_4:7172645-7172664 | None:intergenic | 45.0% |
| GAGTTACCTGAATGGTGTGA+AGG | - | chr8_4:7172718-7172737 | None:intergenic | 45.0% | |
| AAGCGGATCTAAGCTGATAG+AGG | - | chr8_4:7172780-7172799 | None:intergenic | 45.0% | |
| CACTTAAGGGTCTGTTTGGA+AGG | - | chr8_4:7173280-7173299 | None:intergenic | 45.0% | |
| ! | TGCGAGTGTTGTAAACCCTA+GGG | - | chr8_4:7173687-7173706 | None:intergenic | 45.0% |
| ACAGGTTTCTCCTTGACATC+TGG | - | chr8_4:7174208-7174227 | None:intergenic | 45.0% | |
| AGATGTCAAGGAGAAACCTG+TGG | + | chr8_4:7174207-7174226 | Msa1310560:CDS | 45.0% | |
| TTCTCCTGCGAATGTAAGTG+CGG | + | chr8_4:7174276-7174295 | Msa1310560:CDS | 45.0% | |
| !! | TTGTACGGAAGTGTCAAGTC+AGG | + | chr8_4:7174477-7174496 | Msa1310560:CDS | 45.0% |
| CCGAACCAGTATCATGTTAC+TGG | + | chr8_4:7174534-7174553 | Msa1310560:CDS | 45.0% | |
| TGAAGAGTGGAAACCGAGAT+TGG | + | chr8_4:7174642-7174661 | Msa1310560:CDS | 45.0% | |
| GAGATTGGATGCTCTTGACA+TGG | + | chr8_4:7174657-7174676 | Msa1310560:CDS | 45.0% | |
| CTTGACATGGATGCTAGCAA+CGG | + | chr8_4:7174670-7174689 | Msa1310560:CDS | 45.0% | |
| TTGACATGGATGCTAGCAAC+GGG | + | chr8_4:7174671-7174690 | Msa1310560:CDS | 45.0% | |
| CTGATTTATGCCGATGCCTT+GGG | + | chr8_4:7174812-7174831 | Msa1310560:CDS | 45.0% | |
| AAAGAGAGCTAATCCACACC+AGG | - | chr8_4:7174853-7174872 | None:intergenic | 45.0% | |
| CTGACGACCTCAATTACAAC+TGG | - | chr8_4:7175293-7175312 | None:intergenic | 45.0% | |
| AACGTGCTTCTACTCCACTA+TGG | + | chr8_4:7175465-7175484 | Msa1310560:intron | 45.0% | |
| GCACCTTCCATTAACCATAG+TGG | - | chr8_4:7175482-7175501 | None:intergenic | 45.0% | |
| ! | TGGAATGTAAGTTTTGCGGG+AGG | + | chr8_4:7175640-7175659 | Msa1310560:intron | 45.0% |
| ! | TGAAGCTGTGATGTGGATTG+TGG | - | chr8_4:7175706-7175725 | None:intergenic | 45.0% |
| TTTGGCATGAAGCTGTGATG+TGG | - | chr8_4:7175713-7175732 | None:intergenic | 45.0% | |
| CACAGCTTCATGCCAAATGA+CGG | + | chr8_4:7175716-7175735 | Msa1310560:intron | 45.0% | |
| ACAGCTTCATGCCAAATGAC+GGG | + | chr8_4:7175717-7175736 | Msa1310560:intron | 45.0% | |
| ! | CCTCCTTCTGGTGCTTTTAT+AGG | - | chr8_4:7176054-7176073 | None:intergenic | 45.0% |
| !! | CCTATAAAAGCACCAGAAGG+AGG | + | chr8_4:7176051-7176070 | Msa1310560:intron | 45.0% |
| ATGTAGTCAACCTCACCTAG+TGG | + | chr8_4:7176222-7176241 | Msa1310560:intron | 45.0% | |
| CTTTCACTTTCCACTAGGTG+AGG | - | chr8_4:7176235-7176254 | None:intergenic | 45.0% | |
| CCAGTCTTTCACTTTCCACT+AGG | - | chr8_4:7176240-7176259 | None:intergenic | 45.0% | |
| CCTAGTGGAAAGTGAAAGAC+TGG | + | chr8_4:7176237-7176256 | Msa1310560:intron | 45.0% | |
| !! | ACTAGGCTGGCTCTTTTTGA+CGG | - | chr8_4:7176291-7176310 | None:intergenic | 45.0% |
| GAAACCCACAATATGACCCT+AGG | - | chr8_4:7176383-7176402 | None:intergenic | 45.0% | |
| TGTAGGAGACTTTGGACTCT+GGG | - | chr8_4:7176497-7176516 | None:intergenic | 45.0% | |
| ATGTAGGAGACTTTGGACTC+TGG | - | chr8_4:7176498-7176517 | None:intergenic | 45.0% | |
| GTGACGTTGTGCTCTATTGT+GGG | - | chr8_4:7176534-7176553 | None:intergenic | 45.0% | |
| TGTGACGTTGTGCTCTATTG+TGG | - | chr8_4:7176535-7176554 | None:intergenic | 45.0% | |
| CTCCTTTCAAATGGGTGGTT+TGG | + | chr8_4:7176703-7176722 | Msa1310560:intron | 45.0% | |
| AGCCAAACCACCCATTTGAA+AGG | - | chr8_4:7176708-7176727 | None:intergenic | 45.0% | |
| ! | TTTCAAATGGGTGGTTTGGC+TGG | + | chr8_4:7176707-7176726 | Msa1310560:intron | 45.0% |
| TTAGAAGCTCTATGCTGGTG+TGG | + | chr8_4:7176762-7176781 | Msa1310560:intron | 45.0% | |
| GTTGTATGGCCACCAGAAAA+AGG | + | chr8_4:7176854-7176873 | Msa1310560:intron | 45.0% | |
| ! | GATTGTGGTCCACCTTTTTC+TGG | - | chr8_4:7176869-7176888 | None:intergenic | 45.0% |
| AAGAGAGCTGTTTGCTCTCA+AGG | + | chr8_4:7177268-7177287 | Msa1310560:CDS | 45.0% | |
| ! | TGGATCATTCGTTTCTGGAG+AGG | - | chr8_4:7177347-7177366 | None:intergenic | 45.0% |
| !! | TTGGTGCTGGGTACATGTAA+GGG | - | chr8_4:7177541-7177560 | None:intergenic | 45.0% |
| !! | CAGTGATTTTCAGTTGGTGC+TGG | - | chr8_4:7177554-7177573 | None:intergenic | 45.0% |
| GAGTTGAACTCGGTACCCTA+GGG | + | chr8_4:7173669-7173688 | Msa1310560:intron | 50.0% | |
| ! | GTGCGAGTGTTGTAAACCCT+AGG | - | chr8_4:7173688-7173707 | None:intergenic | 50.0% |
| CACTAACCCTGTGGTTGTGA+TGG | + | chr8_4:7173716-7173735 | Msa1310560:intron | 50.0% | |
| CGAGTACCATCACAACCACA+GGG | - | chr8_4:7173725-7173744 | None:intergenic | 50.0% | |
| ACGAGTACCATCACAACCAC+AGG | - | chr8_4:7173726-7173745 | None:intergenic | 50.0% | |
| !! | CGAGGAACATTTTCAAGGGC+TGG | + | chr8_4:7173934-7173953 | Msa1310560:CDS | 50.0% |
| GGCTGGAGAAATCCTTGAAG+AGG | + | chr8_4:7173951-7173970 | Msa1310560:CDS | 50.0% | |
| !!! | GGAAGCGGCTGTTTTTGCTA+AGG | + | chr8_4:7174051-7174070 | Msa1310560:CDS | 50.0% |
| !! | CCTTTGAAGTCTCTGCAGCA+AGG | - | chr8_4:7174083-7174102 | None:intergenic | 50.0% |
| CCTTGCTGCAGAGACTTCAA+AGG | + | chr8_4:7174080-7174099 | Msa1310560:CDS | 50.0% | |
| TGTGGATGCTGTGTCCACTA+GGG | + | chr8_4:7174225-7174244 | Msa1310560:CDS | 50.0% | |
| ATGTCCGCACTTACATTCGC+AGG | - | chr8_4:7174283-7174302 | None:intergenic | 50.0% | |
| TGCAAAGAGATGGATGCTGC+TGG | + | chr8_4:7174331-7174350 | Msa1310560:CDS | 50.0% | |
| CAAGAACCTTGCTGCTGTGA+GGG | + | chr8_4:7174381-7174400 | Msa1310560:CDS | 50.0% | |
| TTTCTTCCCTCACAGCAGCA+AGG | - | chr8_4:7174390-7174409 | None:intergenic | 50.0% | |
| GGAGCAGCTCTTAATGCAAG+TGG | - | chr8_4:7174415-7174434 | None:intergenic | 50.0% | |
| TTAAGAGCTGCTCCCAATGC+TGG | + | chr8_4:7174421-7174440 | Msa1310560:CDS | 50.0% | |
| CAAAGGCAGTTGCTGAAGAG+TGG | + | chr8_4:7174629-7174648 | Msa1310560:CDS | 50.0% | |
| TGCTAGCAACGGGAATTCCT+TGG | + | chr8_4:7174681-7174700 | Msa1310560:CDS | 50.0% | |
| TAGCAACGGGAATTCCTTGG+AGG | + | chr8_4:7174684-7174703 | Msa1310560:CDS | 50.0% | |
| ! | CAAAAAGGCATGAGCCTCCA+AGG | - | chr8_4:7174701-7174720 | None:intergenic | 50.0% |
| ! | GCTGATTTATGCCGATGCCT+TGG | + | chr8_4:7174811-7174830 | Msa1310560:CDS | 50.0% |
| CAGCTTCATGCCAAATGACG+GGG | + | chr8_4:7175718-7175737 | Msa1310560:intron | 50.0% | |
| TGTCCAAACCACCAAAGGCA+AGG | - | chr8_4:7176018-7176037 | None:intergenic | 50.0% | |
| GCACATGTCCAAACCACCAA+AGG | - | chr8_4:7176023-7176042 | None:intergenic | 50.0% | |
| CGTCTAATCTACCCTCCTTC+TGG | - | chr8_4:7176066-7176085 | None:intergenic | 50.0% | |
| GTAGGAGACTTTGGACTCTG+GGG | - | chr8_4:7176496-7176515 | None:intergenic | 50.0% | |
| GTGCACTCCTTTCAAATGGG+TGG | + | chr8_4:7176698-7176717 | Msa1310560:intron | 50.0% | |
| AAGCTCTATGCTGGTGTGGT+TGG | + | chr8_4:7176766-7176785 | Msa1310560:intron | 50.0% | |
| ! | TTGGTAGCTTCTGTGGCTGT+GGG | + | chr8_4:7176785-7176804 | Msa1310560:intron | 50.0% |
| GGTGGCCATACAACAGATAC+TGG | - | chr8_4:7176848-7176867 | None:intergenic | 50.0% | |
| GTATGGCCACCAGAAAAAGG+TGG | + | chr8_4:7176857-7176876 | Msa1310560:intron | 50.0% | |
| ! | TGTGGTCCACCTTTTTCTGG+TGG | - | chr8_4:7176866-7176885 | None:intergenic | 50.0% |
| GAGACTCTGGCTAACTACTG+TGG | + | chr8_4:7176916-7176935 | Msa1310560:intron | 50.0% | |
| ! | CGTTTCTGGAGAGGATCGAT+TGG | - | chr8_4:7177338-7177357 | None:intergenic | 50.0% |
| GATCCAACTAGAGAAGGCCA+AGG | + | chr8_4:7177361-7177380 | Msa1310560:CDS | 50.0% | |
| TTCCCTCTTCTTATCGGCCT+TGG | - | chr8_4:7177381-7177400 | None:intergenic | 50.0% | |
| ATATCCAGCACCATTGGCAC+GGG | - | chr8_4:7177435-7177454 | None:intergenic | 50.0% | |
| CATATCCAGCACCATTGGCA+CGG | - | chr8_4:7177436-7177455 | None:intergenic | 50.0% | |
| CCTGTCAGCAACTCTAGCAT+AGG | - | chr8_4:7177495-7177514 | None:intergenic | 50.0% | |
| CCTATGCTAGAGTTGCTGAC+AGG | + | chr8_4:7177492-7177511 | Msa1310560:CDS | 50.0% | |
| GGCGGTCATACACGTATTGA+GGG | - | chr8_4:7177520-7177539 | None:intergenic | 50.0% | |
| !! | GTTGGTGCTGGGTACATGTA+AGG | - | chr8_4:7177542-7177561 | None:intergenic | 50.0% |
| ! | GGGGAGCAGTGATTTTCAGT+TGG | - | chr8_4:7177560-7177579 | None:intergenic | 50.0% |
| AAATCACTGCTCCCCTTACC+TGG | + | chr8_4:7177565-7177584 | Msa1310560:CDS | 50.0% | |
| AGGTTGCAGAAGCCAGGTAA+GGG | - | chr8_4:7177580-7177599 | None:intergenic | 50.0% | |
| TAGGTTGCAGAAGCCAGGTA+AGG | - | chr8_4:7177581-7177600 | None:intergenic | 50.0% | |
| CGTTATAGGTTGCAGAAGCC+AGG | - | chr8_4:7177586-7177605 | None:intergenic | 50.0% | |
| GGAGTTGAACTCGGTACCCT+AGG | + | chr8_4:7173668-7173687 | Msa1310560:intron | 55.0% | |
| CACACTGCACACTAACCCTG+TGG | + | chr8_4:7173707-7173726 | Msa1310560:intron | 55.0% | |
| TCAAGCGGCACCAGATGTCA+AGG | + | chr8_4:7174195-7174214 | Msa1310560:CDS | 55.0% | |
| ! | CTAGTGGACACAGCATCCAC+AGG | - | chr8_4:7174226-7174245 | None:intergenic | 55.0% |
| CTGTGGATGCTGTGTCCACT+AGG | + | chr8_4:7174224-7174243 | Msa1310560:CDS | 55.0% | |
| GATGTTGCCTTCAGCCCTAG+TGG | - | chr8_4:7174242-7174261 | None:intergenic | 55.0% | |
| GCAAGAACCTTGCTGCTGTG+AGG | + | chr8_4:7174380-7174399 | Msa1310560:CDS | 55.0% | |
| ! | ATGCCGATGCCTTGGGTTGT+CGG | + | chr8_4:7174819-7174838 | Msa1310560:CDS | 55.0% |
| TCTCCGACAACCCAAGGCAT+CGG | - | chr8_4:7174825-7174844 | None:intergenic | 55.0% | |
| GCATCTTCTCCGACAACCCA+AGG | - | chr8_4:7174831-7174850 | None:intergenic | 55.0% | |
| !! | AGTTGGTGAGGCCTTGCCTT+TGG | + | chr8_4:7176004-7176023 | Msa1310560:intron | 55.0% |
| ! | AGGCCTTGCCTTTGGTGGTT+TGG | + | chr8_4:7176012-7176031 | Msa1310560:intron | 55.0% |
| ! | GGTGGTTTGGACATGTGCGT+AGG | + | chr8_4:7176025-7176044 | Msa1310560:intron | 55.0% |
| !! | GGTGTGGTTGGTAGCTTCTG+TGG | + | chr8_4:7176778-7176797 | Msa1310560:intron | 55.0% |
| !! | GTTGGTAGCTTCTGTGGCTG+TGG | + | chr8_4:7176784-7176803 | Msa1310560:intron | 55.0% |
| TGGTAGCTTCTGTGGCTGTG+GGG | + | chr8_4:7176786-7176805 | Msa1310560:intron | 55.0% | |
| AGGCCAAGGCCGATAAGAAG+AGG | + | chr8_4:7177375-7177394 | Msa1310560:CDS | 55.0% | |
| GGCCAAGGCCGATAAGAAGA+GGG | + | chr8_4:7177376-7177395 | Msa1310560:CDS | 55.0% | |
| ! | CCATTGGCACGGGGTCTTTT+GGG | - | chr8_4:7177425-7177444 | None:intergenic | 55.0% |
| ! | ACCATTGGCACGGGGTCTTT+TGG | - | chr8_4:7177426-7177445 | None:intergenic | 55.0% |
| TATCCAGCACCATTGGCACG+GGG | - | chr8_4:7177434-7177453 | None:intergenic | 55.0% | |
| ! | CGTGCCAATGGTGCTGGATA+TGG | + | chr8_4:7177434-7177453 | Msa1310560:CDS | 55.0% |
| GGGACCATATCCAGCACCAT+TGG | - | chr8_4:7177441-7177460 | None:intergenic | 55.0% | |
| GGGCGGTCATACACGTATTG+AGG | - | chr8_4:7177521-7177540 | None:intergenic | 55.0% | |
| GTGCTGGGTACATGTAAGGG+CGG | - | chr8_4:7177538-7177557 | None:intergenic | 55.0% | |
| GGTTGCAGAAGCCAGGTAAG+GGG | - | chr8_4:7177579-7177598 | None:intergenic | 55.0% | |
| GCTGTGTCCACTAGGGCTGA+AGG | + | chr8_4:7174232-7174251 | Msa1310560:CDS | 60.0% | |
| TGGCGACGCCGAGATACCAT+TGG | - | chr8_4:7174787-7174806 | None:intergenic | 60.0% | |
| GGGTTGTCGGAGAAGATGCC+TGG | + | chr8_4:7174832-7174851 | Msa1310560:CDS | 60.0% | |
| GTCGGAGAAGATGCCTGGTG+TGG | + | chr8_4:7174837-7174856 | Msa1310560:intron | 60.0% | |
| TGGTGAGGCCTTGCCTTTGG+TGG | + | chr8_4:7176007-7176026 | Msa1310560:intron | 60.0% | |
| ! | CGGCCTTGGCCTTCTCTAGT+TGG | - | chr8_4:7177367-7177386 | None:intergenic | 60.0% |
| !!! | GCACGGGGTCTTTTGGGTTG+AGG | - | chr8_4:7177419-7177438 | None:intergenic | 60.0% |
| CCCAAAAGACCCCGTGCCAA+TGG | + | chr8_4:7177422-7177441 | Msa1310560:CDS | 60.0% | |
| GCTTCTGTGGCTGTGGGGAC+AGG | + | chr8_4:7176791-7176810 | Msa1310560:intron | 65.0% | |
| AGACCCCGTGCCAATGGTGC+TGG | + | chr8_4:7177428-7177447 | Msa1310560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 7172540 | 7177952 | 7172540 | ID=Msa1310560;Name=Msa1310560 |
| chr8_4 | mRNA | 7172540 | 7177952 | 7172540 | ID=Msa1310560-mRNA-1;Parent=Msa1310560;Name=Msa1310560-mRNA-1;_AED=0.04;_eAED=0.04;_QI=201|1|1|1|0.66|0.5|4|282|545 |
| chr8_4 | exon | 7172540 | 7172730 | 7172540 | ID=Msa1310560-mRNA-1:exon:2482;Parent=Msa1310560-mRNA-1 |
| chr8_4 | exon | 7173796 | 7174853 | 7173796 | ID=Msa1310560-mRNA-1:exon:2483;Parent=Msa1310560-mRNA-1 |
| chr8_4 | exon | 7175035 | 7175207 | 7175035 | ID=Msa1310560-mRNA-1:exon:2484;Parent=Msa1310560-mRNA-1 |
| chr8_4 | exon | 7177254 | 7177952 | 7177254 | ID=Msa1310560-mRNA-1:exon:2485;Parent=Msa1310560-mRNA-1 |
| chr8_4 | five_prime_UTR | 7172540 | 7172730 | 7172540 | ID=Msa1310560-mRNA-1:five_prime_utr;Parent=Msa1310560-mRNA-1 |
| chr8_4 | five_prime_UTR | 7173796 | 7173805 | 7173796 | ID=Msa1310560-mRNA-1:five_prime_utr;Parent=Msa1310560-mRNA-1 |
| chr8_4 | CDS | 7173806 | 7174853 | 7173806 | ID=Msa1310560-mRNA-1:cds;Parent=Msa1310560-mRNA-1 |
| chr8_4 | CDS | 7175035 | 7175207 | 7175035 | ID=Msa1310560-mRNA-1:cds;Parent=Msa1310560-mRNA-1 |
| chr8_4 | CDS | 7177254 | 7177670 | 7177254 | ID=Msa1310560-mRNA-1:cds;Parent=Msa1310560-mRNA-1 |
| chr8_4 | three_prime_UTR | 7177671 | 7177952 | 7177671 | ID=Msa1310560-mRNA-1:three_prime_utr;Parent=Msa1310560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
