Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229920 | XP_013444013.1 | 96.514 | 545 | 19 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1089 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229920 | sp|Q67ZB3|FRL3_ARATH | 58.115 | 573 | 197 | 10 | 1 | 545 | 1 | 558 | 0.0 | 615 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229920 | A0A072TWW9 | 96.514 | 545 | 19 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1089 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040420 | Msa1229920 | -0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0706130 | Msa1229920 | -0.812888 | 3.380393e-51 | -8.615850e-47 |
| Msa0797010 | Msa1229920 | -0.813914 | 2.010915e-51 | -8.615850e-47 |
| Msa1229920 | Msa1310560 | 0.890018 | 1.439137e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229920 | MtrunA17_Chr8g0337661 | 96.514 | 545 | 19 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1089 |
| Msa1229920 | MtrunA17_Chr8g0337651 | 79.342 | 547 | 111 | 1 | 1 | 545 | 1 | 547 | 0.0 | 914 |
| Msa1229920 | MtrunA17_Chr4g0053711 | 37.269 | 542 | 304 | 15 | 16 | 538 | 14 | 538 | 2.11e-107 | 332 |
| Msa1229920 | MtrunA17_Chr1g0205391 | 29.014 | 517 | 301 | 13 | 34 | 537 | 29 | 492 | 9.45e-52 | 184 |
| Msa1229920 | MtrunA17_Chr8g0390621 | 28.381 | 451 | 250 | 11 | 7 | 454 | 6 | 386 | 2.46e-41 | 156 |
| Msa1229920 | MtrunA17_Chr3g0101121 | 33.448 | 290 | 174 | 5 | 171 | 460 | 100 | 370 | 4.24e-40 | 152 |
| Msa1229920 | MtrunA17_Chr5g0445281 | 25.763 | 524 | 299 | 16 | 9 | 519 | 13 | 459 | 1.06e-35 | 141 |
| Msa1229920 | MtrunA17_Chr3g0131341 | 26.481 | 287 | 202 | 6 | 175 | 458 | 155 | 435 | 1.68e-23 | 104 |
| Msa1229920 | MtrunA17_Chr8g0361651 | 27.381 | 252 | 157 | 7 | 202 | 448 | 174 | 404 | 9.88e-15 | 76.6 |
| Msa1229920 | MtrunA17_Chr2g0325711 | 23.503 | 451 | 290 | 12 | 11 | 431 | 391 | 816 | 5.63e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229920 | AT5G48385.1 | 58.115 | 573 | 197 | 10 | 1 | 545 | 1 | 558 | 0.0 | 615 |
| Msa1229920 | AT3G22440.1 | 28.598 | 535 | 316 | 13 | 22 | 541 | 15 | 498 | 7.70e-60 | 207 |
| Msa1229920 | AT4G14900.1 | 29.197 | 548 | 314 | 16 | 1 | 527 | 1 | 495 | 3.58e-54 | 192 |
| Msa1229920 | AT5G16320.1 | 29.793 | 386 | 225 | 11 | 170 | 543 | 99 | 450 | 7.35e-42 | 157 |
| Msa1229920 | AT1G31814.1 | 29.769 | 346 | 205 | 11 | 143 | 472 | 64 | 387 | 1.80e-39 | 150 |
| Msa1229920 | AT5G27230.1 | 27.500 | 240 | 143 | 6 | 267 | 487 | 623 | 850 | 2.44e-19 | 92.8 |
| Msa1229920 | AT4G00650.1 | 30.818 | 159 | 106 | 3 | 170 | 328 | 143 | 297 | 1.76e-12 | 68.9 |
| Msa1229920 | AT5G27220.1 | 28.249 | 177 | 117 | 2 | 268 | 444 | 918 | 1084 | 2.95e-12 | 70.1 |
| Msa1229920 | AT5G27220.3 | 28.249 | 177 | 117 | 2 | 268 | 444 | 918 | 1084 | 2.95e-12 | 70.1 |
| Msa1229920 | AT5G27220.4 | 30.519 | 154 | 96 | 2 | 296 | 444 | 882 | 1029 | 4.67e-12 | 69.7 |
| Msa1229920 | AT5G27220.2 | 30.519 | 154 | 96 | 2 | 296 | 444 | 882 | 1029 | 4.67e-12 | 69.7 |
Find 140 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTTGGATCATTCGTTTC+TGG | 0.146224 | 8_2:+5863943 | None:intergenic |
| CATAACATTTCACATGTTTA+AGG | 0.182141 | 8_2:+5863513 | None:intergenic |
| ACCATTGGCACGGGGTCTTT+TGG | 0.200957 | 8_2:+5863869 | None:intergenic |
| TTCTTCAATGCACTTGATTA+TGG | 0.201533 | 8_2:+5864001 | None:intergenic |
| TTCAGTTTCCCTCTTCTTAT+CGG | 0.212079 | 8_2:+5863908 | None:intergenic |
| TGCCCTATCCTTGATATCTT+TGG | 0.215058 | 8_2:+5866689 | None:intergenic |
| ACTTAAGACTAAATATTAAT+AGG | 0.221856 | 8_2:+5863590 | None:intergenic |
| GACTTGGCTACTGTCTTTAA+TGG | 0.246449 | 8_2:-5867128 | Msa1229920:CDS |
| AAGTGATTTCCTGACCAATT+TGG | 0.264372 | 8_2:-5866733 | Msa1229920:CDS |
| CCAAAGTAAGTTCCAGGATT+AGG | 0.271606 | 8_2:+5863681 | None:intergenic |
| TTGCAACTTCTAGCTAGTTT+TGG | 0.273192 | 8_2:-5866579 | Msa1229920:CDS |
| AAGAGAGCTGTTTGCTCTTA+AGG | 0.293239 | 8_2:-5864024 | Msa1229920:CDS |
| TTCTTTCCTTCACACCATTC+AGG | 0.297338 | 8_2:-5868583 | Msa1229920:intron |
| TTCCCTCTTCTTATCGGCCT+TGG | 0.298760 | 8_2:+5863914 | None:intergenic |
| TCGACAGACTCAAATTAAAT+AGG | 0.313310 | 8_2:+5863375 | None:intergenic |
| CCTAGGAGAGAGAAAGAAAA+AGG | 0.317978 | 8_2:+5868667 | None:intergenic |
| CTGTTACTCTTAACTTGAAA+TGG | 0.318067 | 8_2:-5867394 | Msa1229920:CDS |
| AGTGATTTCCTGACCAATTT+GGG | 0.319354 | 8_2:-5866732 | Msa1229920:CDS |
| CGGCCTTGGCCTTCTCTAGT+TGG | 0.323230 | 8_2:+5863928 | None:intergenic |
| CCGAACCAGTATCATGTTAC+TGG | 0.331112 | 8_2:-5866763 | Msa1229920:CDS |
| ACAGGTTTCTCCTTGACATT+TGG | 0.331370 | 8_2:+5867092 | None:intergenic |
| CCATTTCCAAAGTAAGTTCC+AGG | 0.332535 | 8_2:+5863675 | None:intergenic |
| ATAACATTTCACATGTTTAA+GGG | 0.336538 | 8_2:+5863514 | None:intergenic |
| TGCAGGTGTGATTAAAGTTT+TGG | 0.339912 | 8_2:-5866267 | Msa1229920:intron |
| CCTAATCCTGGAACTTACTT+TGG | 0.351273 | 8_2:-5863681 | Msa1229920:CDS |
| TTCATTAAAACGCCTCTTCA+AGG | 0.368337 | 8_2:+5867334 | None:intergenic |
| GATGAGTTAACACTCTTGAT+TGG | 0.369841 | 8_2:+5866125 | None:intergenic |
| ACTAGCTAGAAGTTGCAAAA+AGG | 0.370539 | 8_2:+5866584 | None:intergenic |
| CCTGGAACTTACTTTGGAAA+TGG | 0.374088 | 8_2:-5863675 | Msa1229920:CDS |
| CTGATTTATGCCGATGCCTT+GGG | 0.381995 | 8_2:-5866485 | Msa1229920:CDS |
| AGGATTAGGAGAGACGTTAT+AGG | 0.383164 | 8_2:+5863695 | None:intergenic |
| TAAGACTTAAGCAGAGGAAT+AGG | 0.383560 | 8_2:+5866176 | None:intergenic |
| TCGAGAAATGATAGAGAAAC+AGG | 0.388435 | 8_2:-5867267 | Msa1229920:CDS |
| CTTAAGACTAAATATTAATA+GGG | 0.392778 | 8_2:+5863591 | None:intergenic |
| GTACAACATACAACAGCTTA+AGG | 0.393144 | 8_2:+5863561 | None:intergenic |
| GGAGATATGTAGCTTGATAT+TGG | 0.406013 | 8_2:+5863649 | None:intergenic |
| ACATTCCAGTAACATGATAC+TGG | 0.409399 | 8_2:+5866758 | None:intergenic |
| ATGCCGATGCCTTGGGTTGT+CGG | 0.412332 | 8_2:-5866478 | Msa1229920:CDS |
| GTTGGTGCTGGGTACATGTA+AGG | 0.412959 | 8_2:+5863753 | None:intergenic |
| ATTAGAAACAGAACCCAAAT+TGG | 0.414560 | 8_2:+5866719 | None:intergenic |
| TTGCATTTCTAGAGAGAGAA+TGG | 0.418508 | 8_2:-5868643 | Msa1229920:five_prime_UTR |
| ACTTGGCTACTGTCTTTAAT+GGG | 0.419239 | 8_2:-5867127 | Msa1229920:CDS |
| TAACAGAACTGATACATTAG+AGG | 0.428427 | 8_2:+5863453 | None:intergenic |
| TTGCATAGCTTTACCAACTC+TGG | 0.435215 | 8_2:+5866984 | None:intergenic |
| GCAAATTGATGCTGTTAACT+TGG | 0.438048 | 8_2:-5866231 | Msa1229920:CDS |
| CGTGCCAATGGTGCTGGATA+TGG | 0.438659 | 8_2:-5863858 | Msa1229920:CDS |
| GCTGATTTATGCCGATGCCT+TGG | 0.440901 | 8_2:-5866486 | Msa1229920:CDS |
| CTGTGGATGCTGTGTCCACT+AGG | 0.452001 | 8_2:-5867073 | Msa1229920:CDS |
| TTCACCGTCTCTCTAATTAG+TGG | 0.452168 | 8_2:+5863628 | None:intergenic |
| TTAAGAGCTGCTCCCAATGC+TGG | 0.456906 | 8_2:-5866876 | Msa1229920:CDS |
| AGACCCCGTGCCAATGGTGC+TGG | 0.459468 | 8_2:-5863864 | Msa1229920:CDS |
| ATCGGCATAAATCAGCAGTT+TGG | 0.462780 | 8_2:+5866493 | None:intergenic |
| AAATCACTGCTCCCCTTACC+TGG | 0.464138 | 8_2:-5863727 | Msa1229920:CDS |
| CGTTATAGGTTGCAGAAGCC+AGG | 0.465914 | 8_2:+5863709 | None:intergenic |
| TACAACATACAACAGCTTAA+GGG | 0.474779 | 8_2:+5863562 | None:intergenic |
| GGCTAATTCCAATGGTATCT+CGG | 0.486974 | 8_2:-5866521 | Msa1229920:CDS |
| TGTGATTTCCAAAGATATCA+AGG | 0.489981 | 8_2:-5866697 | Msa1229920:CDS |
| AAACAGAACCCAAATTGGTC+AGG | 0.497436 | 8_2:+5866724 | None:intergenic |
| TGCTAGCAATGGGAATTCCT+TGG | 0.499073 | 8_2:-5866616 | Msa1229920:CDS |
| TTGTACGGAAGTGTCAAGTC+AGG | 0.499935 | 8_2:-5866820 | Msa1229920:CDS |
| CCAGTAACATGATACTGGTT+CGG | 0.506230 | 8_2:+5866763 | None:intergenic |
| AAAACTAGACAGCCAGCATT+GGG | 0.509841 | 8_2:+5866864 | None:intergenic |
| TTCCAAAGATATCAAGGATA+GGG | 0.509975 | 8_2:-5866691 | Msa1229920:CDS |
| TAAAACTAGACAGCCAGCAT+TGG | 0.512865 | 8_2:+5866863 | None:intergenic |
| GAAGGTTTCATCAAAGGACT+TGG | 0.515565 | 8_2:-5867144 | Msa1229920:CDS |
| GGGCGGTCATACACGTATTG+AGG | 0.516085 | 8_2:+5863774 | None:intergenic |
| CCCAAAAGACCCCGTGCCAA+TGG | 0.519470 | 8_2:-5863870 | Msa1229920:CDS |
| CCTTTGAAGTCTCTGCAGCA+AGG | 0.521025 | 8_2:+5867217 | None:intergenic |
| CAAGAACCTTGCTGCTGTGA+GGG | 0.522921 | 8_2:-5866916 | Msa1229920:CDS |
| TTAATGAGGAGGAGTTATCC+AGG | 0.526398 | 8_2:-5866542 | Msa1229920:CDS |
| TAGGTTGCAGAAGCCAGGTA+AGG | 0.526535 | 8_2:+5863714 | None:intergenic |
| AGATACCATTGGAATTAGCC+TGG | 0.529323 | 8_2:+5866524 | None:intergenic |
| CGTTTCTGGAGAGGATCGAT+TGG | 0.530216 | 8_2:+5863957 | None:intergenic |
| TATAACGTCTCTCCTAATCC+TGG | 0.533859 | 8_2:-5863693 | Msa1229920:CDS |
| TTGACATGGATGCTAGCAAT+GGG | 0.538859 | 8_2:-5866626 | Msa1229920:CDS |
| TGCAAAGAGATGGATGCTGC+TGG | 0.538901 | 8_2:-5866966 | Msa1229920:CDS |
| ATGTCCGCACTTGCATTCGC+AGG | 0.539651 | 8_2:+5867017 | None:intergenic |
| ATATCCAGCACCATTGGCAC+GGG | 0.540249 | 8_2:+5863860 | None:intergenic |
| AGGTTGCAGAAGCCAGGTAA+GGG | 0.540730 | 8_2:+5863715 | None:intergenic |
| TGATTACTTACATGTGCAGT+GGG | 0.544739 | 8_2:+5866101 | None:intergenic |
| GGGACCATATCCAGCACCAT+TGG | 0.544844 | 8_2:+5863854 | None:intergenic |
| TTTCCAAAGATATCAAGGAT+AGG | 0.546279 | 8_2:-5866692 | Msa1229920:CDS |
| AAAAGGAATGTTAGTGACAC+GGG | 0.552784 | 8_2:+5863833 | None:intergenic |
| TATTCACCATTGTAGATGCT+CGG | 0.553561 | 8_2:-5867178 | Msa1229920:CDS |
| TGAAGAGTGGAAACCGAGAT+TGG | 0.553968 | 8_2:-5866655 | Msa1229920:CDS |
| TGGATCATTCGTTTCTGGAG+AGG | 0.556696 | 8_2:+5863948 | None:intergenic |
| TGGCGACGCCGAGATACCAT+TGG | 0.556801 | 8_2:+5866513 | None:intergenic |
| TAAAGGAAGAGTTACCTGAA+TGG | 0.560293 | 8_2:+5868569 | None:intergenic |
| TCTCCGACAACCCAAGGCAT+CGG | 0.560595 | 8_2:+5866475 | None:intergenic |
| TAGCAATGGGAATTCCTTGG+AGG | 0.561927 | 8_2:-5866613 | Msa1229920:CDS |
| CATGATGTCTTATCCAGAGT+TGG | 0.562460 | 8_2:-5866997 | Msa1229920:CDS |
| CTCCTCCTCATTAAAATCAG+AGG | 0.562931 | 8_2:+5866551 | None:intergenic |
| GCTGTGTCCACTAGGGCTGA+AGG | 0.565201 | 8_2:-5867065 | Msa1229920:CDS |
| CAAAGGCAGTTGCTGAAGAG+TGG | 0.567875 | 8_2:-5866668 | Msa1229920:CDS |
| CTCTCTAGAAATGCAACCCT+AGG | 0.568844 | 8_2:+5868650 | None:intergenic |
| GGGTTGTCGGAGAAGATGCC+TGG | 0.574174 | 8_2:-5866465 | Msa1229920:intron |
| GCATCTTCTCCGACAACCCA+AGG | 0.575983 | 8_2:+5866469 | None:intergenic |
| CATATCCAGCACCATTGGCA+CGG | 0.577716 | 8_2:+5863859 | None:intergenic |
| TGAAGGAAAGAAAATAAGAG+AGG | 0.578557 | 8_2:+5868594 | None:intergenic |
| GATGTTGCCTTCAGCCCTAG+TGG | 0.578689 | 8_2:+5867058 | None:intergenic |
| CCTTGCTGCAGAGACTTCAA+AGG | 0.579253 | 8_2:-5867217 | Msa1229920:CDS |
| ATGTCAAGAGCATCCAATCT+CGG | 0.581756 | 8_2:+5866642 | None:intergenic |
| TTCTCCTGCGAATGCAAGTG+CGG | 0.582031 | 8_2:-5867021 | Msa1229920:CDS |
| ATACAGGAAGGTTTCATCAA+AGG | 0.582776 | 8_2:-5867150 | Msa1229920:CDS |
| GGTAAAGCTATGCAAAGAGA+TGG | 0.582969 | 8_2:-5866976 | Msa1229920:CDS |
| CAAAAGGAATGTTAGTGACA+CGG | 0.586475 | 8_2:+5863832 | None:intergenic |
| AGGCCAAGGCCGATAAGAAG+AGG | 0.587218 | 8_2:-5863917 | Msa1229920:CDS |
| TGTGGATGCTGTGTCCACTA+GGG | 0.588731 | 8_2:-5867072 | Msa1229920:CDS |
| ACGAATGATCCAACTAGAGA+AGG | 0.590829 | 8_2:-5863937 | Msa1229920:CDS |
| TTGGTGCTGGGTACATGTAA+GGG | 0.592432 | 8_2:+5863754 | None:intergenic |
| ATCTCCACTAATTAGAGAGA+CGG | 0.599096 | 8_2:-5863632 | Msa1229920:exon |
| CCTGTCAGCAACTCTAGCAT+AGG | 0.600312 | 8_2:+5863800 | None:intergenic |
| GGTTGCAGAAGCCAGGTAAG+GGG | 0.600375 | 8_2:+5863716 | None:intergenic |
| CCTATGCTAGAGTTGCTGAC+AGG | 0.601789 | 8_2:-5863800 | Msa1229920:CDS |
| GGCTGGAGAAATCCTTGAAG+AGG | 0.602202 | 8_2:-5867346 | Msa1229920:CDS |
| CTTGACATGGATGCTAGCAA+TGG | 0.604007 | 8_2:-5866627 | Msa1229920:CDS |
| TCAAGTTAAGAGTAACAGCT+CGG | 0.607083 | 8_2:+5867399 | None:intergenic |
| CTAGTGGACACAGCATCCAC+AGG | 0.607123 | 8_2:+5867074 | None:intergenic |
| GTTATCCAGGCTAATTCCAA+TGG | 0.607375 | 8_2:-5866529 | Msa1229920:CDS |
| AAAGATACAACAGCTGCAGA+AGG | 0.613139 | 8_2:-5867444 | Msa1229920:CDS |
| AGATATCAAGGATAGGGCAA+AGG | 0.614440 | 8_2:-5866685 | Msa1229920:CDS |
| ATGATTACTTACATGTGCAG+TGG | 0.617020 | 8_2:+5866100 | None:intergenic |
| GCAAGAACCTTGCTGCTGTG+AGG | 0.621104 | 8_2:-5866917 | Msa1229920:CDS |
| TTTCTTCCCTCACAGCAGCA+AGG | 0.623673 | 8_2:+5866910 | None:intergenic |
| GGCCAAGGCCGATAAGAAGA+GGG | 0.624405 | 8_2:-5863916 | Msa1229920:CDS |
| GAGTTACCTGAATGGTGTGA+AGG | 0.626230 | 8_2:+5868577 | None:intergenic |
| GGAGCAGCTCTTAATGCAAG+TGG | 0.626965 | 8_2:+5866885 | None:intergenic |
| AATGATAGAGAAACAGGAAG+CGG | 0.629888 | 8_2:-5867261 | Msa1229920:CDS |
| TCAAGCGGCACCAAATGTCA+AGG | 0.634581 | 8_2:-5867102 | Msa1229920:CDS |
| CTTGAAATGGAAAGAACTCG+AGG | 0.646861 | 8_2:-5867381 | Msa1229920:CDS |
| TGTCTTTAATGGGAGTCAAG+CGG | 0.649347 | 8_2:-5867117 | Msa1229920:CDS |
| GAGATTGGATGCTCTTGACA+TGG | 0.651190 | 8_2:-5866640 | Msa1229920:CDS |
| TTCAGGTAAGACTTAAGCAG+AGG | 0.652723 | 8_2:+5866170 | None:intergenic |
| GATCCAACTAGAGAAGGCCA+AGG | 0.660945 | 8_2:-5863931 | Msa1229920:CDS |
| AAATGTCAAGGAGAAACCTG+TGG | 0.677620 | 8_2:-5867090 | Msa1229920:CDS |
| GTGCTGGGTACATGTAAGGG+CGG | 0.678615 | 8_2:+5863757 | None:intergenic |
| AAGAGTTTGAAAACAAGACG+AGG | 0.680352 | 8_2:-5867295 | Msa1229920:CDS |
| AGACGGTGAACTGATAACAA+TGG | 0.703914 | 8_2:-5863615 | Msa1229920:three_prime_UTR |
| TATCCAGCACCATTGGCACG+GGG | 0.708155 | 8_2:+5863861 | None:intergenic |
| AAAGGAATGTTAGTGACACG+GGG | 0.750041 | 8_2:+5863834 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATATTTTTAGAATAGT+AGG | - | chr8_2:5866194-5866213 | Msa1229920:CDS | 10.0% |
| !!! | ATAATATTTTTAGAATAGTA+GGG | - | chr8_2:5866195-5866214 | Msa1229920:CDS | 10.0% |
| !! | AATCTATTAATAAAATATAG+AGG | - | chr8_2:5866914-5866933 | Msa1229920:CDS | 10.0% |
| !!! | TTATGTTAAAATTTTAACTT+CGG | - | chr8_2:5868619-5868638 | Msa1229920:five_prime_UTR | 10.0% |
| !!! | TTTAGGGTTTTTTTAATTTT+TGG | - | chr8_2:5863628-5863647 | Msa1229920:exon | 15.0% |
| !!! | TAGTTTATGATTTTAGAATT+AGG | - | chr8_2:5863731-5863750 | Msa1229920:CDS | 15.0% |
| !!! | AGTTTATGATTTTAGAATTA+GGG | - | chr8_2:5863732-5863751 | Msa1229920:CDS | 15.0% |
| !! | ATTTCTTCAATTAAGATTAT+TGG | - | chr8_2:5863892-5863911 | Msa1229920:CDS | 15.0% |
| !! | TTTCTTCAATTAAGATTATT+GGG | - | chr8_2:5863893-5863912 | Msa1229920:CDS | 15.0% |
| !! | ATTGTCAATATGAAATATTA+AGG | - | chr8_2:5866144-5866163 | Msa1229920:CDS | 15.0% |
| !! | ATTAATAAAATATAGAGGAA+TGG | - | chr8_2:5866919-5866938 | Msa1229920:CDS | 15.0% |
| !! | CTTAAGACTAAATATTAATA+GGG | + | chr8_2:5868526-5868545 | None:intergenic | 15.0% |
| !! | ACTTAAGACTAAATATTAAT+AGG | + | chr8_2:5868527-5868546 | None:intergenic | 15.0% |
| !!! | TTAATTTTTGGTTTTTTCGT+TGG | - | chr8_2:5863640-5863659 | Msa1229920:exon | 20.0% |
| !! | TTGTTGTGATAATACTTATT+TGG | - | chr8_2:5863697-5863716 | Msa1229920:CDS | 20.0% |
| !!! | GTTTATGATTTTAGAATTAG+GGG | - | chr8_2:5863733-5863752 | Msa1229920:CDS | 20.0% |
| !! | TTCTTCAATTAAGATTATTG+GGG | - | chr8_2:5863894-5863913 | Msa1229920:CDS | 20.0% |
| !!! | ACTTTTACATAAACACTTAA+GGG | + | chr8_2:5864111-5864130 | None:intergenic | 20.0% |
| !!! | AACTTTTACATAAACACTTA+AGG | + | chr8_2:5864112-5864131 | None:intergenic | 20.0% |
| !! | ATTGTGCATAAAAAAAATCT+AGG | + | chr8_2:5864374-5864393 | None:intergenic | 20.0% |
| !!! | ACAATGTTAGTTTAGATATA+GGG | - | chr8_2:5864389-5864408 | Msa1229920:intron | 20.0% |
| !!! | TGTAGCTAAACTTTTTTTAT+CGG | + | chr8_2:5864418-5864437 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGTTTAGCTACA+GGG | - | chr8_2:5864418-5864437 | Msa1229920:intron | 20.0% |
| !! | TTTATGATATTATATTGCAG+TGG | - | chr8_2:5864441-5864460 | Msa1229920:intron | 20.0% |
| !!! | TACTCTTTTTTTTTATCAGT+AGG | - | chr8_2:5864464-5864483 | Msa1229920:intron | 20.0% |
| !!! | TTTGTTTAGCTTTTTTACTA+TGG | - | chr8_2:5864604-5864623 | Msa1229920:intron | 20.0% |
| !! | AAAAATGAACATGAGATAAT+TGG | + | chr8_2:5865720-5865739 | None:intergenic | 20.0% |
| !!! | ATTAAAGTTTTGGTAAACAA+TGG | - | chr8_2:5865857-5865876 | Msa1229920:intron | 20.0% |
| !!! | TTAAAGTTTTGGTAAACAAT+GGG | - | chr8_2:5865858-5865877 | Msa1229920:intron | 20.0% |
| !!! | AGACATAATTTTTGATGAAA+AGG | - | chr8_2:5866605-5866624 | Msa1229920:CDS | 20.0% |
| !!! | TAAAGTATTTGAGAGAAATT+TGG | - | chr8_2:5866784-5866803 | Msa1229920:CDS | 20.0% |
| !!! | AAAGTATTTGAGAGAAATTT+GGG | - | chr8_2:5866785-5866804 | Msa1229920:CDS | 20.0% |
| !! | TCTATCTTAATCTTTATGTT+TGG | - | chr8_2:5867143-5867162 | Msa1229920:CDS | 20.0% |
| !!! | CATTCTTTTAGTAGATATAA+TGG | - | chr8_2:5867712-5867731 | Msa1229920:intron | 20.0% |
| !!! | TATTTTGGAGCATAAAAATA+AGG | + | chr8_2:5867967-5867986 | None:intergenic | 20.0% |
| !! | ATAACATTTCACATGTTTAA+GGG | + | chr8_2:5868603-5868622 | None:intergenic | 20.0% |
| ! | AATGAAAGAGAGAGAAATAA+AGG | + | chr8_2:5863565-5863584 | None:intergenic | 25.0% |
| ! | AAAACCCTAAAATGAAAAAG+CGG | + | chr8_2:5863619-5863638 | None:intergenic | 25.0% |
| ! | ATCAATTAAGATAGCAAGAT+TGG | + | chr8_2:5863795-5863814 | None:intergenic | 25.0% |
| !! | ATATTTACAAGCTGATTCTA+GGG | + | chr8_2:5863845-5863864 | None:intergenic | 25.0% |
| ! | TTGACTAAAAAAGATCTGTT+TGG | + | chr8_2:5864042-5864061 | None:intergenic | 25.0% |
| !! | CACAATGTTAGTTTAGATAT+AGG | - | chr8_2:5864388-5864407 | Msa1229920:intron | 25.0% |
| !! | CAATGTTAGTTTAGATATAG+GGG | - | chr8_2:5864390-5864409 | Msa1229920:intron | 25.0% |
| !!! | GTAGCTAAACTTTTTTTATC+GGG | + | chr8_2:5864417-5864436 | None:intergenic | 25.0% |
| ! | GATAAAAAAAGTTTAGCTAC+AGG | - | chr8_2:5864417-5864436 | Msa1229920:intron | 25.0% |
| !! | TTTGGAAGGATTTTATTGTA+CGG | - | chr8_2:5865279-5865298 | Msa1229920:intron | 25.0% |
| !! | TTATGAAAAAGTTGTTTCCT+TGG | - | chr8_2:5865765-5865784 | Msa1229920:intron | 25.0% |
| !! | TATGAAAAAGTTGTTTCCTT+GGG | - | chr8_2:5865766-5865785 | Msa1229920:intron | 25.0% |
| ! | AAATCATTTAAAGAAACCCA+AGG | + | chr8_2:5865785-5865804 | None:intergenic | 25.0% |
| ! | CATGAATAGAAAACAACATT+AGG | + | chr8_2:5866041-5866060 | None:intergenic | 25.0% |
| ! | TAGTAATGTGCAAAATTGTT+TGG | - | chr8_2:5866339-5866358 | Msa1229920:intron | 25.0% |
| !! | AACATTCTCGATTTTTCTAT+TGG | - | chr8_2:5866373-5866392 | Msa1229920:intron | 25.0% |
| ! | TGGATGTAAAATAGAGTTTA+TGG | - | chr8_2:5866405-5866424 | Msa1229920:intron | 25.0% |
| ! | TAGAAGTAAAGTAGAGTATA+TGG | - | chr8_2:5866442-5866461 | Msa1229920:intron | 25.0% |
| !! | TATATGGAATGTAAGTTTTG+CGG | - | chr8_2:5866458-5866477 | Msa1229920:intron | 25.0% |
| ! | GAATAGTAGATGTAAATCAT+AGG | - | chr8_2:5866562-5866581 | Msa1229920:CDS | 25.0% |
| ! | TAAGACCTGTATTAATGTAT+AGG | - | chr8_2:5866658-5866677 | Msa1229920:CDS | 25.0% |
| ! | TCAATCCTATACATTAATAC+AGG | + | chr8_2:5866666-5866685 | None:intergenic | 25.0% |
| !! | AACTGAATTGACTTTCTTAT+AGG | + | chr8_2:5866707-5866726 | None:intergenic | 25.0% |
| ! | AAGTATTTGAGAGAAATTTG+GGG | - | chr8_2:5866786-5866805 | Msa1229920:CDS | 25.0% |
| ! | TAGTAGTATTGCAAATAAGT+TGG | - | chr8_2:5866809-5866828 | Msa1229920:CDS | 25.0% |
| ! | CATTGAATAATGTCAAAAGA+TGG | + | chr8_2:5866998-5867017 | None:intergenic | 25.0% |
| !! | CTTTTGACATTATTCAATGT+AGG | - | chr8_2:5866999-5867018 | Msa1229920:CDS | 25.0% |
| ! | TTATTCAATGTAGGACATTA+TGG | - | chr8_2:5867008-5867027 | Msa1229920:CDS | 25.0% |
| ! | ATCTTAATCTTTATGTTTGG+TGG | - | chr8_2:5867146-5867165 | Msa1229920:CDS | 25.0% |
| !! | TTTTACAGCACTCTAATTTT+TGG | + | chr8_2:5867827-5867846 | None:intergenic | 25.0% |
| !!! | ATTTATTTGGTGTTTTTGAC+AGG | - | chr8_2:5867940-5867959 | Msa1229920:intron | 25.0% |
| ! | CAAAGATGAATATTGAAGAT+AGG | + | chr8_2:5868002-5868021 | None:intergenic | 25.0% |
| ! | TCAATATTCATCTTTGTGTT+TGG | - | chr8_2:5868006-5868025 | Msa1229920:intron | 25.0% |
| ! | CATAACATTTCACATGTTTA+AGG | + | chr8_2:5868604-5868623 | None:intergenic | 25.0% |
| TGAAGGAAAGAAAATAAGAG+AGG | + | chr8_2:5863523-5863542 | None:intergenic | 30.0% | |
| !!! | TAGATCCGCTTTTTCATTTT+AGG | - | chr8_2:5863611-5863630 | Msa1229920:three_prime_UTR | 30.0% |
| !!! | AGATCCGCTTTTTCATTTTA+GGG | - | chr8_2:5863612-5863631 | Msa1229920:three_prime_UTR | 30.0% |
| ! | CATATTTACAAGCTGATTCT+AGG | + | chr8_2:5863846-5863865 | None:intergenic | 30.0% |
| ! | ACAAGCTTGTTTGAAAATGA+TGG | - | chr8_2:5864013-5864032 | Msa1229920:CDS | 30.0% |
| !! | GCTGTTTTCATAAGCTATAT+TGG | - | chr8_2:5864184-5864203 | Msa1229920:intron | 30.0% |
| !!! | GTTTAGCTTTTTTACTATGG+AGG | - | chr8_2:5864607-5864626 | Msa1229920:intron | 30.0% |
| ! | CTGTTACTCTTAACTTGAAA+TGG | - | chr8_2:5864720-5864739 | Msa1229920:intron | 30.0% |
| ! | TGTTTTCAAACTCTTTCTCT+TGG | + | chr8_2:5864814-5864833 | None:intergenic | 30.0% |
| !!! | CTGTCTAGTTTTAGATTCTT+TGG | - | chr8_2:5865261-5865280 | Msa1229920:intron | 30.0% |
| !!! | CTAGTTTTAGATTCTTTGGA+AGG | - | chr8_2:5865265-5865284 | Msa1229920:intron | 30.0% |
| GTCAAGTCAGGATATAAAAA+AGG | - | chr8_2:5865306-5865325 | Msa1229920:intron | 30.0% | |
| ATTAGAAACAGAACCCAAAT+TGG | + | chr8_2:5865398-5865417 | None:intergenic | 30.0% | |
| TGTGATTTCCAAAGATATCA+AGG | - | chr8_2:5865417-5865436 | Msa1229920:intron | 30.0% | |
| TTTCCAAAGATATCAAGGAT+AGG | - | chr8_2:5865422-5865441 | Msa1229920:intron | 30.0% | |
| TTCCAAAGATATCAAGGATA+GGG | - | chr8_2:5865423-5865442 | Msa1229920:intron | 30.0% | |
| !! | TATTGCCTCTGATTTTAATG+AGG | - | chr8_2:5865558-5865577 | Msa1229920:intron | 30.0% |
| GAGATAATTGGATGAAAACT+TGG | + | chr8_2:5865708-5865727 | None:intergenic | 30.0% | |
| !! | TCATTTTACTTTTGATGTGC+AGG | - | chr8_2:5865830-5865849 | Msa1229920:intron | 30.0% |
| ! | AAGTTTTCTTAGCATCATTC+AGG | + | chr8_2:5865964-5865983 | None:intergenic | 30.0% |
| ATTAAGGTTGTTAGTTGCAA+AGG | - | chr8_2:5866160-5866179 | Msa1229920:CDS | 30.0% | |
| ! | TTTTCTATTGGATTCTCTTG+TGG | - | chr8_2:5866385-5866404 | Msa1229920:intron | 30.0% |
| ! | ATATGGAATGTAAGTTTTGC+GGG | - | chr8_2:5866459-5866478 | Msa1229920:intron | 30.0% |
| ! | TTCTTAATGATTTGGCCTAT+AGG | + | chr8_2:5866956-5866975 | None:intergenic | 30.0% |
| TATAGGCCAAATCATTAAGA+AGG | - | chr8_2:5866955-5866974 | Msa1229920:CDS | 30.0% | |
| CCAAATCCTTCTTAATGATT+TGG | + | chr8_2:5866964-5866983 | None:intergenic | 30.0% | |
| CCAAATCATTAAGAAGGATT+TGG | - | chr8_2:5866961-5866980 | Msa1229920:CDS | 30.0% | |
| AGATAGAAACTAGTGAAACT+AGG | + | chr8_2:5867130-5867149 | None:intergenic | 30.0% | |
| !! | TTGCTTTAAGTTGAATTCCT+AGG | - | chr8_2:5867185-5867204 | Msa1229920:CDS | 30.0% |
| !! | TGCTTTAAGTTGAATTCCTA+GGG | - | chr8_2:5867186-5867205 | Msa1229920:CDS | 30.0% |
| ATACTATATGTAGGAGACTT+TGG | + | chr8_2:5867327-5867346 | None:intergenic | 30.0% | |
| TAGCAGTATATGTGATAGTA+GGG | + | chr8_2:5867395-5867414 | None:intergenic | 30.0% | |
| TTAGCAGTATATGTGATAGT+AGG | + | chr8_2:5867396-5867415 | None:intergenic | 30.0% | |
| TTAGACTAGGAAATAACTAG+TGG | + | chr8_2:5867459-5867478 | None:intergenic | 30.0% | |
| AGTTCTATAAATCACTGTGA+TGG | + | chr8_2:5867565-5867584 | None:intergenic | 30.0% | |
| CTACTAAAAGAATGAGATTG+TGG | + | chr8_2:5867706-5867725 | None:intergenic | 30.0% | |
| ACTAATGCAATTGGAAGAAT+GGG | - | chr8_2:5867784-5867803 | Msa1229920:intron | 30.0% | |
| !! | AGAGTAGAGAAGCATTTATT+TGG | - | chr8_2:5867927-5867946 | Msa1229920:intron | 30.0% |
| ! | AGGCAATGTTGTAGTTATTT+TGG | + | chr8_2:5867982-5868001 | None:intergenic | 30.0% |
| TTCATCTTTGTGTTTGGTTA+TGG | - | chr8_2:5868012-5868031 | Msa1229920:intron | 30.0% | |
| TTCTTCAATGCACTTGATTA+TGG | + | chr8_2:5868116-5868135 | None:intergenic | 30.0% | |
| TACAACATACAACAGCTTAA+GGG | + | chr8_2:5868555-5868574 | None:intergenic | 30.0% | |
| TAACAGAACTGATACATTAG+AGG | + | chr8_2:5868664-5868683 | None:intergenic | 30.0% | |
| TCGACAGACTCAAATTAAAT+AGG | + | chr8_2:5868742-5868761 | None:intergenic | 30.0% | |
| ! | CTTTTTCTTTCTCTCTCCTA+GGG | - | chr8_2:5863448-5863467 | Msa1229920:three_prime_UTR | 35.0% |
| ! | TTGCATTTCTAGAGAGAGAA+TGG | - | chr8_2:5863471-5863490 | Msa1229920:three_prime_UTR | 35.0% |
| TAAAGGAAGAGTTACCTGAA+TGG | + | chr8_2:5863548-5863567 | None:intergenic | 35.0% | |
| !!! | AGGACACATTTTTGAGGTTA+TGG | + | chr8_2:5864078-5864097 | None:intergenic | 35.0% |
| ! | TTTGGAAGGACACATTTTTG+AGG | + | chr8_2:5864084-5864103 | None:intergenic | 35.0% |
| TAAACACTTAAGGGTCTGTT+TGG | + | chr8_2:5864102-5864121 | None:intergenic | 35.0% | |
| ! | AAGCACTTGTAATGCTGTTT+GGG | + | chr8_2:5864274-5864293 | None:intergenic | 35.0% |
| ! | AAGCACTTGTAATGCTGTTT+GGG | + | chr8_2:5864274-5864293 | None:intergenic | 35.0% |
| TAAGCACTTGTAATGCTGTT+TGG | + | chr8_2:5864313-5864332 | None:intergenic | 35.0% | |
| TCAAACAAGCCAGTCTAAAT+AGG | - | chr8_2:5864348-5864367 | Msa1229920:intron | 35.0% | |
| AAATCTAGGCCTATTTAGAC+TGG | + | chr8_2:5864360-5864379 | None:intergenic | 35.0% | |
| TTATCAGTAGGAGTTGAACT+TGG | - | chr8_2:5864476-5864495 | Msa1229920:intron | 35.0% | |
| !!! | CTTTTTTACTATGGAGGACA+AGG | - | chr8_2:5864613-5864632 | Msa1229920:intron | 35.0% |
| TCAAGTTAAGAGTAACAGCT+CGG | + | chr8_2:5864718-5864737 | None:intergenic | 35.0% | |
| ! | AACTCGAGGAACATTTTCAA+GGG | - | chr8_2:5864747-5864766 | Msa1229920:intron | 35.0% |
| TTCATTAAAACGCCTCTTCA+AGG | + | chr8_2:5864783-5864802 | None:intergenic | 35.0% | |
| AAGAGTTTGAAAACAAGACG+AGG | - | chr8_2:5864819-5864838 | Msa1229920:intron | 35.0% | |
| TCGAGAAATGATAGAGAAAC+AGG | - | chr8_2:5864847-5864866 | Msa1229920:intron | 35.0% | |
| AATGATAGAGAAACAGGAAG+CGG | - | chr8_2:5864853-5864872 | Msa1229920:intron | 35.0% | |
| TATTCACCATTGTAGATGCT+CGG | - | chr8_2:5864936-5864955 | Msa1229920:intron | 35.0% | |
| !!! | TTTTTTCCGAGCATCTACAA+TGG | + | chr8_2:5864945-5864964 | None:intergenic | 35.0% |
| TAGATGCTCGGAAAAAATAC+AGG | - | chr8_2:5864948-5864967 | Msa1229920:intron | 35.0% | |
| ATACAGGAAGGTTTCATCAA+AGG | - | chr8_2:5864964-5864983 | Msa1229920:intron | 35.0% | |
| ACTTGGCTACTGTCTTTAAT+GGG | - | chr8_2:5864987-5865006 | Msa1229920:intron | 35.0% | |
| ! | AAAAAAGGATGCTAACTTGC+TGG | - | chr8_2:5865321-5865340 | Msa1229920:intron | 35.0% |
| !! | AAAAAGGATGCTAACTTGCT+GGG | - | chr8_2:5865322-5865341 | Msa1229920:intron | 35.0% |
| ACATTCCAGTAACATGATAC+TGG | + | chr8_2:5865359-5865378 | None:intergenic | 35.0% | |
| AAGTGATTTCCTGACCAATT+TGG | - | chr8_2:5865381-5865400 | Msa1229920:intron | 35.0% | |
| AGTGATTTCCTGACCAATTT+GGG | - | chr8_2:5865382-5865401 | Msa1229920:intron | 35.0% | |
| ACTAGCTAGAAGTTGCAAAA+AGG | + | chr8_2:5865533-5865552 | None:intergenic | 35.0% | |
| !! | TTGCAACTTCTAGCTAGTTT+TGG | - | chr8_2:5865535-5865554 | Msa1229920:intron | 35.0% |
| ! | TGCAGGTGTGATTAAAGTTT+TGG | - | chr8_2:5865847-5865866 | Msa1229920:intron | 35.0% |
| !! | AAGTTTTGGTAAACAATGGG+AGG | - | chr8_2:5865861-5865880 | Msa1229920:intron | 35.0% |
| GCAAATTGATGCTGTTAACT+TGG | - | chr8_2:5865883-5865902 | Msa1229920:intron | 35.0% | |
| TAAGACTTAAGCAGAGGAAT+AGG | + | chr8_2:5865941-5865960 | None:intergenic | 35.0% | |
| GATGAGTTAACACTCTTGAT+TGG | + | chr8_2:5865992-5866011 | None:intergenic | 35.0% | |
| TGATTACTTACATGTGCAGT+GGG | + | chr8_2:5866016-5866035 | None:intergenic | 35.0% | |
| ATGATTACTTACATGTGCAG+TGG | + | chr8_2:5866017-5866036 | None:intergenic | 35.0% | |
| TGTTTGTCCAGTTGTAATTG+AGG | - | chr8_2:5866100-5866119 | Msa1229920:intron | 35.0% | |
| TAGGGATATATTGTCCAATC+AGG | - | chr8_2:5866213-5866232 | Msa1229920:CDS | 35.0% | |
| !! | CAATAAGAAGAGTACCTGAT+TGG | + | chr8_2:5866230-5866249 | None:intergenic | 35.0% |
| ATCAGGTACTCTTCTTATTG+AGG | - | chr8_2:5866230-5866249 | Msa1229920:CDS | 35.0% | |
| TTCTACTCCACTATGGTTAA+TGG | - | chr8_2:5866289-5866308 | Msa1229920:intron | 35.0% | |
| GTAAATCATAGGATTCATGC+AGG | - | chr8_2:5866573-5866592 | Msa1229920:CDS | 35.0% | |
| GAAAGTCAATTCAGTTAGAC+AGG | - | chr8_2:5866711-5866730 | Msa1229920:CDS | 35.0% | |
| GTGGTCATACAAGATAAGAT+AGG | - | chr8_2:5866753-5866772 | Msa1229920:CDS | 35.0% | |
| !! | GTATTGCAAATAAGTTGGTG+AGG | - | chr8_2:5866814-5866833 | Msa1229920:CDS | 35.0% |
| ATGGAGAAACACAATCCTAT+AGG | - | chr8_2:5866938-5866957 | Msa1229920:CDS | 35.0% | |
| GTTGACTACATAGATCATCA+GGG | + | chr8_2:5867035-5867054 | None:intergenic | 35.0% | |
| TTCCTCTGTTCTCTAACAAA+TGG | + | chr8_2:5867089-5867108 | None:intergenic | 35.0% | |
| AATTCCTAGGGTCATATTGT+GGG | - | chr8_2:5867198-5867217 | Msa1229920:CDS | 35.0% | |
| ATCTCGAAGATAATGTGATG+TGG | - | chr8_2:5867231-5867250 | Msa1229920:CDS | 35.0% | |
| TCTCGAAGATAATGTGATGT+GGG | - | chr8_2:5867232-5867251 | Msa1229920:CDS | 35.0% | |
| TGCGTGACGATATAACTATT+TGG | + | chr8_2:5867272-5867291 | None:intergenic | 35.0% | |
| TTCCTAGTCTAACTTACATC+AGG | - | chr8_2:5867467-5867486 | Msa1229920:CDS | 35.0% | |
| CTAGACTGCATAAAAATAGC+AGG | + | chr8_2:5867501-5867520 | None:intergenic | 35.0% | |
| TTCTTCCAATTGCATTAGTG+TGG | + | chr8_2:5867783-5867802 | None:intergenic | 35.0% | |
| CACTAATGCAATTGGAAGAA+TGG | - | chr8_2:5867783-5867802 | Msa1229920:intron | 35.0% | |
| CTAATGCAATTGGAAGAATG+GGG | - | chr8_2:5867785-5867804 | Msa1229920:intron | 35.0% | |
| TATCGTCTTGAATTGCCTTA+AGG | - | chr8_2:5867887-5867906 | Msa1229920:intron | 35.0% | |
| ATGCATTTGATGCATCCTTA+AGG | + | chr8_2:5867905-5867924 | None:intergenic | 35.0% | |
| TTCAGTTTCCCTCTTCTTAT+CGG | + | chr8_2:5868209-5868228 | None:intergenic | 35.0% | |
| AAAAGGAATGTTAGTGACAC+GGG | + | chr8_2:5868284-5868303 | None:intergenic | 35.0% | |
| CAAAAGGAATGTTAGTGACA+CGG | + | chr8_2:5868285-5868304 | None:intergenic | 35.0% | |
| !! | GCATAGGAAGTTTTGTCAAA+AGG | + | chr8_2:5868301-5868320 | None:intergenic | 35.0% |
| GGAGATATGTAGCTTGATAT+TGG | + | chr8_2:5868468-5868487 | None:intergenic | 35.0% | |
| ATCTCCACTAATTAGAGAGA+CGG | - | chr8_2:5868482-5868501 | Msa1229920:intron | 35.0% | |
| GTACAACATACAACAGCTTA+AGG | + | chr8_2:5868556-5868575 | None:intergenic | 35.0% | |
| AGAGAGAAAGAAAAAGGAGG+AGG | + | chr8_2:5863444-5863463 | None:intergenic | 40.0% | |
| AGGAGAGAGAAAGAAAAAGG+AGG | + | chr8_2:5863447-5863466 | None:intergenic | 40.0% | |
| CCTAGGAGAGAGAAAGAAAA+AGG | + | chr8_2:5863450-5863469 | None:intergenic | 40.0% | |
| ! | CCTTTTTCTTTCTCTCTCCT+AGG | - | chr8_2:5863447-5863466 | Msa1229920:three_prime_UTR | 40.0% |
| TTCTTTCCTTCACACCATTC+AGG | - | chr8_2:5863531-5863550 | Msa1229920:three_prime_UTR | 40.0% | |
| ! | ATGCTGTTTGGGACAACTTA+CGG | + | chr8_2:5864263-5864282 | None:intergenic | 40.0% |
| CAAGCACTTGTAATGCTGTT+TGG | + | chr8_2:5864275-5864294 | None:intergenic | 40.0% | |
| ! | ATGCTGTTTGGGACAACTTA+CGG | + | chr8_2:5864263-5864282 | None:intergenic | 40.0% |
| GCTTGTTTGAGCTTATCTAC+TGG | + | chr8_2:5864338-5864357 | None:intergenic | 40.0% | |
| AAAGATACAACAGCTGCAGA+AGG | - | chr8_2:5864670-5864689 | Msa1229920:intron | 40.0% | |
| CTTGAAATGGAAAGAACTCG+AGG | - | chr8_2:5864733-5864752 | Msa1229920:intron | 40.0% | |
| ! | GAACTCGAGGAACATTTTCA+AGG | - | chr8_2:5864746-5864765 | Msa1229920:intron | 40.0% |
| !!! | GAAGAGGCGTTTTAATGAAC+TGG | - | chr8_2:5864784-5864803 | Msa1229920:intron | 40.0% |
| TGCTCGGAAAAAATACAGGA+AGG | - | chr8_2:5864952-5864971 | Msa1229920:intron | 40.0% | |
| GAAGGTTTCATCAAAGGACT+TGG | - | chr8_2:5864970-5864989 | Msa1229920:intron | 40.0% | |
| GACTTGGCTACTGTCTTTAA+TGG | - | chr8_2:5864986-5865005 | Msa1229920:intron | 40.0% | |
| TGTCTTTAATGGGAGTCAAG+CGG | - | chr8_2:5864997-5865016 | Msa1229920:intron | 40.0% | |
| ACAGGTTTCTCCTTGACATT+TGG | + | chr8_2:5865025-5865044 | None:intergenic | 40.0% | |
| AAATGTCAAGGAGAAACCTG+TGG | - | chr8_2:5865024-5865043 | Msa1229920:intron | 40.0% | |
| CATGATGTCTTATCCAGAGT+TGG | - | chr8_2:5865117-5865136 | Msa1229920:intron | 40.0% | |
| ! | TTGCATAGCTTTACCAACTC+TGG | + | chr8_2:5865133-5865152 | None:intergenic | 40.0% |
| GGTAAAGCTATGCAAAGAGA+TGG | - | chr8_2:5865138-5865157 | Msa1229920:intron | 40.0% | |
| AAAACTAGACAGCCAGCATT+GGG | + | chr8_2:5865253-5865272 | None:intergenic | 40.0% | |
| TAAAACTAGACAGCCAGCAT+TGG | + | chr8_2:5865254-5865273 | None:intergenic | 40.0% | |
| ! | CCAGTAACATGATACTGGTT+CGG | + | chr8_2:5865354-5865373 | None:intergenic | 40.0% |
| AAACAGAACCCAAATTGGTC+AGG | + | chr8_2:5865393-5865412 | None:intergenic | 40.0% | |
| TGCCCTATCCTTGATATCTT+TGG | + | chr8_2:5865428-5865447 | None:intergenic | 40.0% | |
| AGATATCAAGGATAGGGCAA+AGG | - | chr8_2:5865429-5865448 | Msa1229920:intron | 40.0% | |
| !! | ATGTCAAGAGCATCCAATCT+CGG | + | chr8_2:5865475-5865494 | None:intergenic | 40.0% |
| TTGACATGGATGCTAGCAAT+GGG | - | chr8_2:5865488-5865507 | Msa1229920:intron | 40.0% | |
| !! | TGCCTCTGATTTTAATGAGG+AGG | - | chr8_2:5865561-5865580 | Msa1229920:intron | 40.0% |
| CTCCTCCTCATTAAAATCAG+AGG | + | chr8_2:5865566-5865585 | None:intergenic | 40.0% | |
| TTAATGAGGAGGAGTTATCC+AGG | - | chr8_2:5865572-5865591 | Msa1229920:intron | 40.0% | |
| GTTATCCAGGCTAATTCCAA+TGG | - | chr8_2:5865585-5865604 | Msa1229920:intron | 40.0% | |
| AGATACCATTGGAATTAGCC+TGG | + | chr8_2:5865593-5865612 | None:intergenic | 40.0% | |
| GGCTAATTCCAATGGTATCT+CGG | - | chr8_2:5865593-5865612 | Msa1229920:intron | 40.0% | |
| ATCGGCATAAATCAGCAGTT+TGG | + | chr8_2:5865624-5865643 | None:intergenic | 40.0% | |
| TTCAGGTAAGACTTAAGCAG+AGG | + | chr8_2:5865947-5865966 | None:intergenic | 40.0% | |
| TCTTATTGAGGAGTGATCTC+AGG | - | chr8_2:5866242-5866261 | Msa1229920:CDS | 40.0% | |
| ACTCCACTATGGTTAATGGA+AGG | - | chr8_2:5866293-5866312 | Msa1229920:intron | 40.0% | |
| ATCTACTATTCCCCGTCATT+TGG | + | chr8_2:5866553-5866572 | None:intergenic | 40.0% | |
| TAGACAGGAGAATGCTATGA+AGG | - | chr8_2:5866726-5866745 | Msa1229920:CDS | 40.0% | |
| AGAATGCTATGAAGGATGAG+TGG | - | chr8_2:5866734-5866753 | Msa1229920:CDS | 40.0% | |
| AGACCTATAGAAACACCAGA+AGG | - | chr8_2:5866870-5866889 | Msa1229920:CDS | 40.0% | |
| CTATAGAAACACCAGAAGGA+GGG | - | chr8_2:5866874-5866893 | Msa1229920:CDS | 40.0% | |
| GGTTGACTACATAGATCATC+AGG | + | chr8_2:5867036-5867055 | None:intergenic | 40.0% | |
| ! | GTCCATTTGTTAGAGAACAG+AGG | - | chr8_2:5867084-5867103 | Msa1229920:CDS | 40.0% |
| AGAAACTAGTGAAACTAGGC+TGG | + | chr8_2:5867126-5867145 | None:intergenic | 40.0% | |
| GAATTCCTAGGGTCATATTG+TGG | - | chr8_2:5867197-5867216 | Msa1229920:CDS | 40.0% | |
| GGGCGAAGAATACTATATGT+AGG | + | chr8_2:5867336-5867355 | None:intergenic | 40.0% | |
| CTAGTGGCAGAACTACTTAA+TGG | + | chr8_2:5867443-5867462 | None:intergenic | 40.0% | |
| TGCCTGATGTAAGTTAGACT+AGG | + | chr8_2:5867472-5867491 | None:intergenic | 40.0% | |
| TCTAGTGCACTCCTTTCAAA+TGG | - | chr8_2:5867516-5867535 | Msa1229920:intron | 40.0% | |
| CTAGTGCACTCCTTTCAAAT+GGG | - | chr8_2:5867517-5867536 | Msa1229920:intron | 40.0% | |
| AGAACTTAGAAGCTCTATGC+TGG | - | chr8_2:5867579-5867598 | Msa1229920:intron | 40.0% | |
| GTTTGCCAGTATCTGTTGTA+TGG | - | chr8_2:5867662-5867681 | Msa1229920:intron | 40.0% | |
| GATATAATGGCAAGAGACTC+TGG | - | chr8_2:5867725-5867744 | Msa1229920:intron | 40.0% | |
| ACTACTGTGGTTGAAGTATG+TGG | - | chr8_2:5867751-5867770 | Msa1229920:intron | 40.0% | |
| ATGTGCCACACTAATGCAAT+TGG | - | chr8_2:5867775-5867794 | Msa1229920:intron | 40.0% | |
| AAGAGAGCTGTTTGCTCTTA+AGG | - | chr8_2:5868090-5868109 | Msa1229920:intron | 40.0% | |
| CTAGTTGGATCATTCGTTTC+TGG | + | chr8_2:5868174-5868193 | None:intergenic | 40.0% | |
| ACGAATGATCCAACTAGAGA+AGG | - | chr8_2:5868177-5868196 | Msa1229920:intron | 40.0% | |
| AAAGGAATGTTAGTGACACG+GGG | + | chr8_2:5868283-5868302 | None:intergenic | 40.0% | |
| !! | AGTGATTTTCAGTTGGTGCT+GGG | + | chr8_2:5868375-5868394 | None:intergenic | 40.0% |
| AGGATTAGGAGAGACGTTAT+AGG | + | chr8_2:5868422-5868441 | None:intergenic | 40.0% | |
| TATAACGTCTCTCCTAATCC+TGG | - | chr8_2:5868421-5868440 | Msa1229920:intron | 40.0% | |
| CCAAAGTAAGTTCCAGGATT+AGG | + | chr8_2:5868436-5868455 | None:intergenic | 40.0% | |
| CCTAATCCTGGAACTTACTT+TGG | - | chr8_2:5868433-5868452 | Msa1229920:intron | 40.0% | |
| CCATTTCCAAAGTAAGTTCC+AGG | + | chr8_2:5868442-5868461 | None:intergenic | 40.0% | |
| ! | CCTGGAACTTACTTTGGAAA+TGG | - | chr8_2:5868439-5868458 | Msa1229920:intron | 40.0% |
| TTCACCGTCTCTCTAATTAG+TGG | + | chr8_2:5868489-5868508 | None:intergenic | 40.0% | |
| AGACGGTGAACTGATAACAA+TGG | - | chr8_2:5868499-5868518 | Msa1229920:intron | 40.0% | |
| GAGAAAGAAAAAGGAGGAGG+AGG | + | chr8_2:5863441-5863460 | None:intergenic | 45.0% | |
| ! | CTCTCTAGAAATGCAACCCT+AGG | + | chr8_2:5863467-5863486 | None:intergenic | 45.0% |
| GAGTTACCTGAATGGTGTGA+AGG | + | chr8_2:5863540-5863559 | None:intergenic | 45.0% | |
| AAGCGGATCTAAGCTGATAG+AGG | + | chr8_2:5863602-5863621 | None:intergenic | 45.0% | |
| CACTTAAGGGTCTGTTTGGA+AGG | + | chr8_2:5864098-5864117 | None:intergenic | 45.0% | |
| GAGTTGAACTTGGTACCCTA+GGG | - | chr8_2:5864486-5864505 | Msa1229920:intron | 45.0% | |
| ! | TGCGAGTGTTGTAAACCCTA+GGG | + | chr8_2:5864504-5864523 | None:intergenic | 45.0% |
| !! | TTGTACGGAAGTGTCAAGTC+AGG | - | chr8_2:5865294-5865313 | Msa1229920:intron | 45.0% |
| CCGAACCAGTATCATGTTAC+TGG | - | chr8_2:5865351-5865370 | Msa1229920:intron | 45.0% | |
| TGAAGAGTGGAAACCGAGAT+TGG | - | chr8_2:5865459-5865478 | Msa1229920:intron | 45.0% | |
| GAGATTGGATGCTCTTGACA+TGG | - | chr8_2:5865474-5865493 | Msa1229920:intron | 45.0% | |
| CTTGACATGGATGCTAGCAA+TGG | - | chr8_2:5865487-5865506 | Msa1229920:intron | 45.0% | |
| TGCTAGCAATGGGAATTCCT+TGG | - | chr8_2:5865498-5865517 | Msa1229920:intron | 45.0% | |
| TAGCAATGGGAATTCCTTGG+AGG | - | chr8_2:5865501-5865520 | Msa1229920:intron | 45.0% | |
| CTGATTTATGCCGATGCCTT+GGG | - | chr8_2:5865629-5865648 | Msa1229920:intron | 45.0% | |
| TAAGAGAGCTAATCCACACC+AGG | + | chr8_2:5865670-5865689 | None:intergenic | 45.0% | |
| CTGACGACCTCAATTACAAC+TGG | + | chr8_2:5866110-5866129 | None:intergenic | 45.0% | |
| AACGTGCTTCTACTCCACTA+TGG | - | chr8_2:5866282-5866301 | Msa1229920:intron | 45.0% | |
| GCACCTTCCATTAACCATAG+TGG | + | chr8_2:5866299-5866318 | None:intergenic | 45.0% | |
| ! | TGGAATGTAAGTTTTGCGGG+AGG | - | chr8_2:5866462-5866481 | Msa1229920:intron | 45.0% |
| ! | TGAAGCTGTGATGTGGATTG+TGG | + | chr8_2:5866528-5866547 | None:intergenic | 45.0% |
| TTTGGCATGAAGCTGTGATG+TGG | + | chr8_2:5866535-5866554 | None:intergenic | 45.0% | |
| CACAGCTTCATGCCAAATGA+CGG | - | chr8_2:5866538-5866557 | Msa1229920:CDS | 45.0% | |
| ACAGCTTCATGCCAAATGAC+GGG | - | chr8_2:5866539-5866558 | Msa1229920:CDS | 45.0% | |
| ! | CCTCCTTCTGGTGTTTCTAT+AGG | + | chr8_2:5866876-5866895 | None:intergenic | 45.0% |
| CCTATAGAAACACCAGAAGG+AGG | - | chr8_2:5866873-5866892 | Msa1229920:CDS | 45.0% | |
| ATGTAGTCAACCTCACCTAG+TGG | - | chr8_2:5867044-5867063 | Msa1229920:CDS | 45.0% | |
| CTTTCACTTTCCACTAGGTG+AGG | + | chr8_2:5867057-5867076 | None:intergenic | 45.0% | |
| CCAGTCTTTCACTTTCCACT+AGG | + | chr8_2:5867062-5867081 | None:intergenic | 45.0% | |
| CCTAGTGGAAAGTGAAAGAC+TGG | - | chr8_2:5867059-5867078 | Msa1229920:CDS | 45.0% | |
| ! | ACTAGGCTGGCTCTTATTGA+CGG | + | chr8_2:5867113-5867132 | None:intergenic | 45.0% |
| GAAACCCACAATATGACCCT+AGG | + | chr8_2:5867205-5867224 | None:intergenic | 45.0% | |
| TGTAGGAGACTTTGGACTCT+GGG | + | chr8_2:5867319-5867338 | None:intergenic | 45.0% | |
| ATGTAGGAGACTTTGGACTC+TGG | + | chr8_2:5867320-5867339 | None:intergenic | 45.0% | |
| GTGACGTTGTGCTCTATTGT+GGG | + | chr8_2:5867356-5867375 | None:intergenic | 45.0% | |
| TGTGACGTTGTGCTCTATTG+TGG | + | chr8_2:5867357-5867376 | None:intergenic | 45.0% | |
| CTCCTTTCAAATGGGTGGTT+TGG | - | chr8_2:5867525-5867544 | Msa1229920:intron | 45.0% | |
| AGCCAAACCACCCATTTGAA+AGG | + | chr8_2:5867530-5867549 | None:intergenic | 45.0% | |
| ! | TTTCAAATGGGTGGTTTGGC+TGG | - | chr8_2:5867529-5867548 | Msa1229920:intron | 45.0% |
| TTAGAAGCTCTATGCTGGTG+TGG | - | chr8_2:5867584-5867603 | Msa1229920:intron | 45.0% | |
| GTTGTATGGCCACCAGAAAA+AGG | - | chr8_2:5867676-5867695 | Msa1229920:intron | 45.0% | |
| ! | GATTGTGGTCCACCTTTTTC+TGG | + | chr8_2:5867691-5867710 | None:intergenic | 45.0% |
| ! | TGGATCATTCGTTTCTGGAG+AGG | + | chr8_2:5868169-5868188 | None:intergenic | 45.0% |
| !! | TTGGTGCTGGGTACATGTAA+GGG | + | chr8_2:5868363-5868382 | None:intergenic | 45.0% |
| !! | CAGTGATTTTCAGTTGGTGC+TGG | + | chr8_2:5868376-5868395 | None:intergenic | 45.0% |
| GGAGTTGAACTTGGTACCCT+AGG | - | chr8_2:5864485-5864504 | Msa1229920:intron | 50.0% | |
| ! | GTGCGAGTGTTGTAAACCCT+AGG | + | chr8_2:5864505-5864524 | None:intergenic | 50.0% |
| CACTAACCCTGTGGTTGTGA+TGG | - | chr8_2:5864533-5864552 | Msa1229920:intron | 50.0% | |
| CGAGTACCATCACAACCACA+GGG | + | chr8_2:5864542-5864561 | None:intergenic | 50.0% | |
| ACGAGTACCATCACAACCAC+AGG | + | chr8_2:5864543-5864562 | None:intergenic | 50.0% | |
| !! | CGAGGAACATTTTCAAGGGC+TGG | - | chr8_2:5864751-5864770 | Msa1229920:intron | 50.0% |
| GGCTGGAGAAATCCTTGAAG+AGG | - | chr8_2:5864768-5864787 | Msa1229920:intron | 50.0% | |
| !!! | GGAAGCGGCTGTTTTTGCTA+AGG | - | chr8_2:5864868-5864887 | Msa1229920:intron | 50.0% |
| !! | CCTTTGAAGTCTCTGCAGCA+AGG | + | chr8_2:5864900-5864919 | None:intergenic | 50.0% |
| CCTTGCTGCAGAGACTTCAA+AGG | - | chr8_2:5864897-5864916 | Msa1229920:intron | 50.0% | |
| TCAAGCGGCACCAAATGTCA+AGG | - | chr8_2:5865012-5865031 | Msa1229920:intron | 50.0% | |
| TGTGGATGCTGTGTCCACTA+GGG | - | chr8_2:5865042-5865061 | Msa1229920:intron | 50.0% | |
| TTCTCCTGCGAATGCAAGTG+CGG | - | chr8_2:5865093-5865112 | Msa1229920:intron | 50.0% | |
| TGCAAAGAGATGGATGCTGC+TGG | - | chr8_2:5865148-5865167 | Msa1229920:intron | 50.0% | |
| CAAGAACCTTGCTGCTGTGA+GGG | - | chr8_2:5865198-5865217 | Msa1229920:intron | 50.0% | |
| TTTCTTCCCTCACAGCAGCA+AGG | + | chr8_2:5865207-5865226 | None:intergenic | 50.0% | |
| GGAGCAGCTCTTAATGCAAG+TGG | + | chr8_2:5865232-5865251 | None:intergenic | 50.0% | |
| TTAAGAGCTGCTCCCAATGC+TGG | - | chr8_2:5865238-5865257 | Msa1229920:intron | 50.0% | |
| CAAAGGCAGTTGCTGAAGAG+TGG | - | chr8_2:5865446-5865465 | Msa1229920:intron | 50.0% | |
| ! | CAAAAAGGCATGAGCCTCCA+AGG | + | chr8_2:5865518-5865537 | None:intergenic | 50.0% |
| ! | GCTGATTTATGCCGATGCCT+TGG | - | chr8_2:5865628-5865647 | Msa1229920:intron | 50.0% |
| CAGCTTCATGCCAAATGACG+GGG | - | chr8_2:5866540-5866559 | Msa1229920:CDS | 50.0% | |
| CGTCTAATCTACCCTCCTTC+TGG | + | chr8_2:5866888-5866907 | None:intergenic | 50.0% | |
| GTAGGAGACTTTGGACTCTG+GGG | + | chr8_2:5867318-5867337 | None:intergenic | 50.0% | |
| GTGCACTCCTTTCAAATGGG+TGG | - | chr8_2:5867520-5867539 | Msa1229920:intron | 50.0% | |
| AAGCTCTATGCTGGTGTGGT+TGG | - | chr8_2:5867588-5867607 | Msa1229920:intron | 50.0% | |
| ! | TTGGTAGCTTCTGTGGCTGT+GGG | - | chr8_2:5867607-5867626 | Msa1229920:intron | 50.0% |
| GGTGGCCATACAACAGATAC+TGG | + | chr8_2:5867670-5867689 | None:intergenic | 50.0% | |
| GTATGGCCACCAGAAAAAGG+TGG | - | chr8_2:5867679-5867698 | Msa1229920:intron | 50.0% | |
| ! | TGTGGTCCACCTTTTTCTGG+TGG | + | chr8_2:5867688-5867707 | None:intergenic | 50.0% |
| GAGACTCTGGCTAACTACTG+TGG | - | chr8_2:5867738-5867757 | Msa1229920:intron | 50.0% | |
| ! | CGTTTCTGGAGAGGATCGAT+TGG | + | chr8_2:5868160-5868179 | None:intergenic | 50.0% |
| GATCCAACTAGAGAAGGCCA+AGG | - | chr8_2:5868183-5868202 | Msa1229920:intron | 50.0% | |
| TTCCCTCTTCTTATCGGCCT+TGG | + | chr8_2:5868203-5868222 | None:intergenic | 50.0% | |
| ATATCCAGCACCATTGGCAC+GGG | + | chr8_2:5868257-5868276 | None:intergenic | 50.0% | |
| CATATCCAGCACCATTGGCA+CGG | + | chr8_2:5868258-5868277 | None:intergenic | 50.0% | |
| CCTGTCAGCAACTCTAGCAT+AGG | + | chr8_2:5868317-5868336 | None:intergenic | 50.0% | |
| CCTATGCTAGAGTTGCTGAC+AGG | - | chr8_2:5868314-5868333 | Msa1229920:intron | 50.0% | |
| GGCGGTCATACACGTATTGA+GGG | + | chr8_2:5868342-5868361 | None:intergenic | 50.0% | |
| !! | GTTGGTGCTGGGTACATGTA+AGG | + | chr8_2:5868364-5868383 | None:intergenic | 50.0% |
| ! | GGGGAGCAGTGATTTTCAGT+TGG | + | chr8_2:5868382-5868401 | None:intergenic | 50.0% |
| AAATCACTGCTCCCCTTACC+TGG | - | chr8_2:5868387-5868406 | Msa1229920:intron | 50.0% | |
| AGGTTGCAGAAGCCAGGTAA+GGG | + | chr8_2:5868402-5868421 | None:intergenic | 50.0% | |
| TAGGTTGCAGAAGCCAGGTA+AGG | + | chr8_2:5868403-5868422 | None:intergenic | 50.0% | |
| CGTTATAGGTTGCAGAAGCC+AGG | + | chr8_2:5868408-5868427 | None:intergenic | 50.0% | |
| CACACTGCACACTAACCCTG+TGG | - | chr8_2:5864524-5864543 | Msa1229920:intron | 55.0% | |
| ! | CTAGTGGACACAGCATCCAC+AGG | + | chr8_2:5865043-5865062 | None:intergenic | 55.0% |
| CTGTGGATGCTGTGTCCACT+AGG | - | chr8_2:5865041-5865060 | Msa1229920:intron | 55.0% | |
| GATGTTGCCTTCAGCCCTAG+TGG | + | chr8_2:5865059-5865078 | None:intergenic | 55.0% | |
| ATGTCCGCACTTGCATTCGC+AGG | + | chr8_2:5865100-5865119 | None:intergenic | 55.0% | |
| GCAAGAACCTTGCTGCTGTG+AGG | - | chr8_2:5865197-5865216 | Msa1229920:intron | 55.0% | |
| ! | ATGCCGATGCCTTGGGTTGT+CGG | - | chr8_2:5865636-5865655 | Msa1229920:intron | 55.0% |
| TCTCCGACAACCCAAGGCAT+CGG | + | chr8_2:5865642-5865661 | None:intergenic | 55.0% | |
| GCATCTTCTCCGACAACCCA+AGG | + | chr8_2:5865648-5865667 | None:intergenic | 55.0% | |
| !! | AAGTTGGTGAGGCCTTGCCT+TGG | - | chr8_2:5866825-5866844 | Msa1229920:CDS | 55.0% |
| !! | AGTTGGTGAGGCCTTGCCTT+GGG | - | chr8_2:5866826-5866845 | Msa1229920:CDS | 55.0% |
| TGTCCAAACCACCCAAGGCA+AGG | + | chr8_2:5866840-5866859 | None:intergenic | 55.0% | |
| GCACATGTCCAAACCACCCA+AGG | + | chr8_2:5866845-5866864 | None:intergenic | 55.0% | |
| ! | GGTGGTTTGGACATGTGCGT+AGG | - | chr8_2:5866847-5866866 | Msa1229920:CDS | 55.0% |
| !! | GGTGTGGTTGGTAGCTTCTG+TGG | - | chr8_2:5867600-5867619 | Msa1229920:intron | 55.0% |
| !! | GTTGGTAGCTTCTGTGGCTG+TGG | - | chr8_2:5867606-5867625 | Msa1229920:intron | 55.0% |
| TGGTAGCTTCTGTGGCTGTG+GGG | - | chr8_2:5867608-5867627 | Msa1229920:intron | 55.0% | |
| AGGCCAAGGCCGATAAGAAG+AGG | - | chr8_2:5868197-5868216 | Msa1229920:intron | 55.0% | |
| GGCCAAGGCCGATAAGAAGA+GGG | - | chr8_2:5868198-5868217 | Msa1229920:intron | 55.0% | |
| ! | CCATTGGCACGGGGTCTTTT+GGG | + | chr8_2:5868247-5868266 | None:intergenic | 55.0% |
| ! | ACCATTGGCACGGGGTCTTT+TGG | + | chr8_2:5868248-5868267 | None:intergenic | 55.0% |
| TATCCAGCACCATTGGCACG+GGG | + | chr8_2:5868256-5868275 | None:intergenic | 55.0% | |
| ! | CGTGCCAATGGTGCTGGATA+TGG | - | chr8_2:5868256-5868275 | Msa1229920:intron | 55.0% |
| GGGACCATATCCAGCACCAT+TGG | + | chr8_2:5868263-5868282 | None:intergenic | 55.0% | |
| GGGCGGTCATACACGTATTG+AGG | + | chr8_2:5868343-5868362 | None:intergenic | 55.0% | |
| GTGCTGGGTACATGTAAGGG+CGG | + | chr8_2:5868360-5868379 | None:intergenic | 55.0% | |
| GGTTGCAGAAGCCAGGTAAG+GGG | + | chr8_2:5868401-5868420 | None:intergenic | 55.0% | |
| GCTGTGTCCACTAGGGCTGA+AGG | - | chr8_2:5865049-5865068 | Msa1229920:intron | 60.0% | |
| TGGCGACGCCGAGATACCAT+TGG | + | chr8_2:5865604-5865623 | None:intergenic | 60.0% | |
| GGGTTGTCGGAGAAGATGCC+TGG | - | chr8_2:5865649-5865668 | Msa1229920:intron | 60.0% | |
| GTCGGAGAAGATGCCTGGTG+TGG | - | chr8_2:5865654-5865673 | Msa1229920:intron | 60.0% | |
| AGGCCTTGCCTTGGGTGGTT+TGG | - | chr8_2:5866834-5866853 | Msa1229920:CDS | 60.0% | |
| ! | CGGCCTTGGCCTTCTCTAGT+TGG | + | chr8_2:5868189-5868208 | None:intergenic | 60.0% |
| !!! | GCACGGGGTCTTTTGGGTTG+AGG | + | chr8_2:5868241-5868260 | None:intergenic | 60.0% |
| CCCAAAAGACCCCGTGCCAA+TGG | - | chr8_2:5868244-5868263 | Msa1229920:intron | 60.0% | |
| TGGTGAGGCCTTGCCTTGGG+TGG | - | chr8_2:5866829-5866848 | Msa1229920:CDS | 65.0% | |
| GCTTCTGTGGCTGTGGGGAC+AGG | - | chr8_2:5867613-5867632 | Msa1229920:intron | 65.0% | |
| AGACCCCGTGCCAATGGTGC+TGG | - | chr8_2:5868250-5868269 | Msa1229920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 5863362 | 5868774 | 5863362 | ID=Msa1229920;Name=Msa1229920 |
| chr8_2 | mRNA | 5863362 | 5868774 | 5863362 | ID=Msa1229920-mRNA-1;Parent=Msa1229920;Name=Msa1229920-mRNA-1;_AED=0.29;_eAED=0.29;_QI=201|1|1|1|0.66|0.5|4|282|545 |
| chr8_2 | exon | 5863362 | 5864060 | 5863362 | ID=Msa1229920-mRNA-1:exon:2093;Parent=Msa1229920-mRNA-1 |
| chr8_2 | exon | 5866112 | 5866284 | 5866112 | ID=Msa1229920-mRNA-1:exon:2092;Parent=Msa1229920-mRNA-1 |
| chr8_2 | exon | 5866466 | 5867523 | 5866466 | ID=Msa1229920-mRNA-1:exon:2091;Parent=Msa1229920-mRNA-1 |
| chr8_2 | exon | 5868584 | 5868774 | 5868584 | ID=Msa1229920-mRNA-1:exon:2090;Parent=Msa1229920-mRNA-1 |
| chr8_2 | five_prime_UTR | 5868584 | 5868774 | 5868584 | ID=Msa1229920-mRNA-1:five_prime_utr;Parent=Msa1229920-mRNA-1 |
| chr8_2 | five_prime_UTR | 5867514 | 5867523 | 5867514 | ID=Msa1229920-mRNA-1:five_prime_utr;Parent=Msa1229920-mRNA-1 |
| chr8_2 | CDS | 5866466 | 5867513 | 5866466 | ID=Msa1229920-mRNA-1:cds;Parent=Msa1229920-mRNA-1 |
| chr8_2 | CDS | 5866112 | 5866284 | 5866112 | ID=Msa1229920-mRNA-1:cds;Parent=Msa1229920-mRNA-1 |
| chr8_2 | CDS | 5863644 | 5864060 | 5863644 | ID=Msa1229920-mRNA-1:cds;Parent=Msa1229920-mRNA-1 |
| chr8_2 | three_prime_UTR | 5863362 | 5863643 | 5863362 | ID=Msa1229920-mRNA-1:three_prime_utr;Parent=Msa1229920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
