Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310740 | XP_013444044.2 | 98.525 | 339 | 4 | 1 | 1 | 338 | 40 | 378 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310740 | sp|Q9LVM5|TTHL_ARATH | 55.621 | 338 | 134 | 6 | 1 | 338 | 3 | 324 | 8.42e-123 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310740 | A0A396GJD9 | 98.525 | 339 | 4 | 1 | 1 | 338 | 40 | 378 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039080 | Msa1310740 | 0.811281 | 7.571683e-51 | -8.615850e-47 |
| Msa1310740 | Msa1432200 | 0.957696 | 1.452436e-115 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310740 | MtrunA17_Chr8g0337961 | 98.525 | 339 | 4 | 1 | 1 | 338 | 40 | 378 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1310740 | AT5G58220.1 | 55.621 | 338 | 134 | 6 | 1 | 338 | 3 | 324 | 8.56e-124 | 358 |
| Msa1310740 | AT5G58220.3 | 53.846 | 338 | 127 | 5 | 1 | 338 | 3 | 311 | 4.19e-118 | 343 |
| Msa1310740 | AT5G58220.2 | 49.408 | 338 | 117 | 6 | 1 | 338 | 3 | 286 | 3.08e-102 | 302 |
Find 115 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTGGGGCTTTGGAATT+TGG | 0.114049 | 8_4:+7360609 | None:intergenic |
| GGCGGGTTCTAGATGTATTT+TGG | 0.159404 | 8_4:+7356306 | None:intergenic |
| TTCTACTGCTTCTAGTTTAC+AGG | 0.188765 | 8_4:-7359261 | Msa1310740:intron |
| GATTCTCTTCAATTGCAAAT+TGG | 0.205482 | 8_4:+7360594 | None:intergenic |
| GGTGGCTGTTGGGTGGTTCT+AGG | 0.216479 | 8_4:-7356167 | Msa1310740:CDS |
| AGCCATTTCCTTGGCGAATT+TGG | 0.239082 | 8_4:+7360493 | None:intergenic |
| CATTACATGCATTGAATATC+TGG | 0.246885 | 8_4:-7355880 | Msa1310740:three_prime_UTR |
| CGTGGAAGCTAGAAGAAATA+TGG | 0.253989 | 8_4:-7355927 | Msa1310740:exon |
| GTATTTCTTGTATGTGCATC+TGG | 0.260181 | 8_4:-7358785 | Msa1310740:CDS |
| ATTCTCTTCAATTGCAAATT+GGG | 0.261938 | 8_4:+7360595 | None:intergenic |
| GAAGTTCGTGTAAGCATTAT+TGG | 0.263978 | 8_4:-7356374 | Msa1310740:CDS |
| AATTATTATCCTATACAGTA+TGG | 0.285764 | 8_4:+7355806 | None:intergenic |
| CTAGGGTTGTTGTTATATAA+AGG | 0.289505 | 8_4:+7355662 | None:intergenic |
| CTCCAAAAGCACCTCAATTC+CGG | 0.294220 | 8_4:+7356235 | None:intergenic |
| TCCCGGAATTGAGGTGCTTT+TGG | 0.296500 | 8_4:-7356237 | Msa1310740:CDS |
| TCAATTGCAAATTGGGGCTT+TGG | 0.299087 | 8_4:+7360602 | None:intergenic |
| CGGTAAGTGCTGAATGAAAA+TGG | 0.309873 | 8_4:+7355948 | None:intergenic |
| GCTGCTTCAAACACTTTAAC+AGG | 0.315332 | 8_4:-7356338 | Msa1310740:CDS |
| TTCAACATAGTTGATGTTAA+TGG | 0.330213 | 8_4:-7360413 | Msa1310740:CDS |
| GCTCGGTATATGCAAAAGTT+TGG | 0.334277 | 8_4:-7358812 | Msa1310740:CDS |
| CTCGGTATATGCAAAAGTTT+GGG | 0.334442 | 8_4:-7358811 | Msa1310740:CDS |
| GTTATATAAAGGAAACATAT+AGG | 0.345880 | 8_4:+7355673 | None:intergenic |
| ATTAGTGTGTGTGAAGAAAA+TGG | 0.351357 | 8_4:-7360567 | Msa1310740:exon |
| GCAATCTCAAATTCAACAAT+TGG | 0.354080 | 8_4:+7358641 | None:intergenic |
| CTCACGTGTTGGATGTTTCT+CGG | 0.355578 | 8_4:-7356271 | Msa1310740:CDS |
| AGTCAAGCTGGACCGACATT+TGG | 0.369607 | 8_4:-7356200 | Msa1310740:CDS |
| TCCAAAAGCACCTCAATTCC+GGG | 0.372767 | 8_4:+7356236 | None:intergenic |
| TTCTCTGCTCATCCTTCCAT+TGG | 0.390272 | 8_4:-7360377 | Msa1310740:CDS |
| GTCAAGCTGGACCGACATTT+GGG | 0.392499 | 8_4:-7356199 | Msa1310740:CDS |
| CACCAAATTCGCCAAGGAAA+TGG | 0.394021 | 8_4:-7360495 | Msa1310740:CDS |
| TCACGTGTTGGATGTTTCTC+GGG | 0.395957 | 8_4:-7356270 | Msa1310740:CDS |
| TCAAACACAATAGTTGCATA+TGG | 0.400955 | 8_4:+7356023 | None:intergenic |
| GTACCTTCTGCCCTTTGACT+TGG | 0.404536 | 8_4:+7358515 | None:intergenic |
| GATTACAGATGGTGGCTGTT+GGG | 0.405208 | 8_4:-7356177 | Msa1310740:CDS |
| TGAATTTGAGATTGCAGCTC+AGG | 0.407697 | 8_4:-7358633 | Msa1310740:CDS |
| ATAGTTGATGATGTGGATCC+AGG | 0.408500 | 8_4:-7356098 | Msa1310740:CDS |
| TCACCGTTGCCAAACACATT+TGG | 0.409186 | 8_4:-7360436 | Msa1310740:CDS |
| GGATTACAGATGGTGGCTGT+TGG | 0.411740 | 8_4:-7356178 | Msa1310740:CDS |
| ATGTAATGCCCATACTGTAT+AGG | 0.422852 | 8_4:-7355815 | Msa1310740:three_prime_UTR |
| GTGTGGAGGGGAAGTCAAGC+TGG | 0.429946 | 8_4:-7356212 | Msa1310740:CDS |
| TTATATAAAGGAAACATATA+GGG | 0.431796 | 8_4:+7355674 | None:intergenic |
| GTGGCTGTTGGGTGGTTCTA+GGG | 0.436476 | 8_4:-7356166 | Msa1310740:CDS |
| AGCACCTCAATTCCGGGAGC+TGG | 0.440342 | 8_4:+7356242 | None:intergenic |
| TCTCCTTTCTCAATAATAGC+AGG | 0.444364 | 8_4:-7355711 | Msa1310740:three_prime_UTR |
| TATGTTGAACCAAATGTGTT+TGG | 0.451110 | 8_4:+7360427 | None:intergenic |
| ATGTGGATCCAGGGATATAC+AGG | 0.451996 | 8_4:-7356088 | Msa1310740:CDS |
| ATTGTACTTCCCAGTGTTGA+AGG | 0.456075 | 8_4:+7356061 | None:intergenic |
| AACACGTGAGTGGTAATAGC+TGG | 0.456849 | 8_4:+7356284 | None:intergenic |
| AAATCCTAGAGTCACAGAAA+AGG | 0.470609 | 8_4:-7356001 | Msa1310740:CDS |
| GACCCTGCTATTATTGAGAA+AGG | 0.471555 | 8_4:+7355708 | None:intergenic |
| CATATTTCTTCTAGCTTCCA+CGG | 0.477254 | 8_4:+7355928 | None:intergenic |
| TACAGGTTAACCTTCAACAC+TGG | 0.478221 | 8_4:-7356071 | Msa1310740:CDS |
| CATGTAATGAATGCATTGAT+AGG | 0.480287 | 8_4:+7355894 | None:intergenic |
| ATGAAGTGGAATTGTATTTG+TGG | 0.485834 | 8_4:-7355849 | Msa1310740:three_prime_UTR |
| ATCGCTACTTGCTGAACTAA+AGG | 0.492974 | 8_4:-7358750 | Msa1310740:intron |
| AGAGGCAGCAGCCATTTCCT+TGG | 0.495725 | 8_4:+7360484 | None:intergenic |
| AATCCTAGAGTCACAGAAAA+GGG | 0.497578 | 8_4:-7356000 | Msa1310740:CDS |
| AACGATTACTTATCATGTTG+TGG | 0.500899 | 8_4:-7360521 | Msa1310740:CDS |
| TGCTGTTGCTCCAAGTCAAA+GGG | 0.506927 | 8_4:-7358525 | Msa1310740:CDS |
| ACTGGGAAGTACAATCCAAC+TGG | 0.517694 | 8_4:-7356053 | Msa1310740:CDS |
| TTCTCTTCAATTGCAAATTG+GGG | 0.517817 | 8_4:+7360596 | None:intergenic |
| GTGGAAGCTAGAAGAAATAT+GGG | 0.525509 | 8_4:-7355926 | Msa1310740:exon |
| TTGCTGTTGCTCCAAGTCAA+AGG | 0.529760 | 8_4:-7358526 | Msa1310740:CDS |
| CTCCTTTCTCAATAATAGCA+GGG | 0.531472 | 8_4:-7355710 | Msa1310740:three_prime_UTR |
| GGGGCTTTGGAATTTGGATG+AGG | 0.532200 | 8_4:+7360615 | None:intergenic |
| CGGTCGTAGCGGTCAACTGA+TGG | 0.532379 | 8_4:-7356123 | Msa1310740:CDS |
| TACAGATGGTGGCTGTTGGG+TGG | 0.533680 | 8_4:-7356174 | Msa1310740:CDS |
| ATATCCAGCTCCCGGAATTG+AGG | 0.537061 | 8_4:-7356246 | Msa1310740:CDS |
| ACATAGTTGATGTTAATGGT+TGG | 0.538148 | 8_4:-7360409 | Msa1310740:CDS |
| AGCTATTACCACTCACGTGT+TGG | 0.538674 | 8_4:-7356282 | Msa1310740:CDS |
| GTGAGAGCACGGTGGTAGGA+AGG | 0.538834 | 8_4:+7360455 | None:intergenic |
| AAGGTTAACCTGTATATCCC+TGG | 0.539407 | 8_4:+7356080 | None:intergenic |
| GTGAGTGGTAATAGCTGGGC+GGG | 0.543192 | 8_4:+7356289 | None:intergenic |
| TATTTCTTGTATGTGCATCT+GGG | 0.543903 | 8_4:-7358784 | Msa1310740:CDS |
| AACTAGCTGAATGGAATGCT+CGG | 0.547622 | 8_4:-7358829 | Msa1310740:CDS |
| GAAGCATGAGAAGGAGGGCG+AGG | 0.560176 | 8_4:+7360350 | None:intergenic |
| GCATATGGAAAGAAACCAGT+TGG | 0.562422 | 8_4:+7356038 | None:intergenic |
| TCTCGGGGATATCCAGCTCC+CGG | 0.563802 | 8_4:-7356254 | Msa1310740:CDS |
| CCGACATTTGGGATTACAGA+TGG | 0.564322 | 8_4:-7356188 | Msa1310740:CDS |
| TAGTTGATGATGTGGATCCA+GGG | 0.564635 | 8_4:-7356097 | Msa1310740:CDS |
| TTGACTTGGAGCAACAGCAA+TGG | 0.564640 | 8_4:+7358529 | None:intergenic |
| ATTATTATCCTATACAGTAT+GGG | 0.572920 | 8_4:+7355807 | None:intergenic |
| GCACGGTGGTAGGAAGGGAA+AGG | 0.581962 | 8_4:+7360461 | None:intergenic |
| TACTTGTAAAGAGCTTTGCA+AGG | 0.593121 | 8_4:+7358585 | None:intergenic |
| GTGTGTGAAGAAAATGGAAG+TGG | 0.596274 | 8_4:-7360561 | Msa1310740:exon |
| ACACGTGAGTGGTAATAGCT+GGG | 0.598487 | 8_4:+7356285 | None:intergenic |
| TGAGAGCACGGTGGTAGGAA+GGG | 0.599244 | 8_4:+7360456 | None:intergenic |
| GTTGCAGAAGCATGAGAAGG+AGG | 0.599827 | 8_4:+7360344 | None:intergenic |
| TTGCAGAAGCATGAGAAGGA+GGG | 0.602059 | 8_4:+7360345 | None:intergenic |
| ATGTAATGAATGCATTGATA+GGG | 0.605175 | 8_4:+7355895 | None:intergenic |
| GCTCCAAGTCAAAGGGCAGA+AGG | 0.606960 | 8_4:-7358518 | Msa1310740:intron |
| AGGAGGGCGAGGTTGACCAA+TGG | 0.607629 | 8_4:+7360361 | None:intergenic |
| CACGTGTTGGATGTTTCTCG+GGG | 0.610889 | 8_4:-7356269 | Msa1310740:CDS |
| AAGAAAATGGAAGTGGGTGT+AGG | 0.613815 | 8_4:-7360554 | Msa1310740:exon |
| GAAGTCTGAACAATAAGTAG+TGG | 0.614064 | 8_4:-7360694 | Msa1310740:five_prime_UTR |
| CTTGTTGCAGAAGCATGAGA+AGG | 0.616967 | 8_4:+7360341 | None:intergenic |
| AACGGTGAGAGCACGGTGGT+AGG | 0.617040 | 8_4:+7360451 | None:intergenic |
| GAACCAAATGTGTTTGGCAA+CGG | 0.621547 | 8_4:+7360433 | None:intergenic |
| GTTCGTGTAAGCATTATTGG+TGG | 0.622015 | 8_4:-7356371 | Msa1310740:CDS |
| GGGCGAGGTTGACCAATGGA+AGG | 0.626289 | 8_4:+7360365 | None:intergenic |
| ACAGGTTAACCTTCAACACT+GGG | 0.628760 | 8_4:-7356070 | Msa1310740:CDS |
| GAAAATGGCGAAAGCAACAG+AGG | 0.632589 | 8_4:+7355963 | None:intergenic |
| GTCTGAACAATAAGTAGTGG+TGG | 0.635790 | 8_4:-7360691 | Msa1310740:five_prime_UTR |
| GATGGACATAGTTGATGATG+TGG | 0.639170 | 8_4:-7356105 | Msa1310740:CDS |
| ACATTTGGGATTACAGATGG+TGG | 0.653563 | 8_4:-7356185 | Msa1310740:CDS |
| TGGAAGCACCAAATTCGCCA+AGG | 0.657369 | 8_4:-7360501 | Msa1310740:CDS |
| CCATCTGTAATCCCAAATGT+CGG | 0.659850 | 8_4:+7356188 | None:intergenic |
| AGAAACATCCAACACGTGAG+TGG | 0.660985 | 8_4:+7356274 | None:intergenic |
| TCTTCGACAACTGACTCTGA+CGG | 0.662979 | 8_4:-7356143 | Msa1310740:CDS |
| GTTTGGCAACGGTGAGAGCA+CGG | 0.669576 | 8_4:+7360444 | None:intergenic |
| GTGGTAGGAAGGGAAAGGAG+AGG | 0.679494 | 8_4:+7360466 | None:intergenic |
| TGTGTGAAGAAAATGGAAGT+GGG | 0.686882 | 8_4:-7360560 | Msa1310740:exon |
| CGTGAGTGGTAATAGCTGGG+CGG | 0.700959 | 8_4:+7356288 | None:intergenic |
| ACTGACTCTGACGGTCGTAG+CGG | 0.716759 | 8_4:-7356134 | Msa1310740:CDS |
| TGGCAACGGTGAGAGCACGG+TGG | 0.805180 | 8_4:+7360447 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTATATTGATATAAAAAA+TGG | - | chr8_4:7356181-7356200 | Msa1310740:CDS | 10.0% |
| !! | AATAAAATAGATTATAGAAA+AGG | - | chr8_4:7358551-7358570 | Msa1310740:CDS | 10.0% |
| !! | TTATTTGATATTCTATTATT+TGG | - | chr8_4:7358818-7358837 | Msa1310740:CDS | 10.0% |
| !!! | AAATTGTTATTTTAGTGTAA+AGG | - | chr8_4:7356270-7356289 | Msa1310740:CDS | 15.0% |
| !!! | TATTTTTATAGTGTTGTTAA+TGG | - | chr8_4:7356443-7356462 | Msa1310740:intron | 15.0% |
| !! | AATATGAAGTGATTTATATT+TGG | + | chr8_4:7356878-7356897 | None:intergenic | 15.0% |
| !!! | TTTTAACTAATATCAAGTTT+AGG | - | chr8_4:7356906-7356925 | Msa1310740:intron | 15.0% |
| !! | TTTGCATTAATAAAAAAACT+TGG | - | chr8_4:7357008-7357027 | Msa1310740:intron | 15.0% |
| !!! | CGTTATTGTTTTTATTATTA+CGG | - | chr8_4:7357360-7357379 | Msa1310740:intron | 15.0% |
| !! | AAAGGTAAAATATGAATTTA+AGG | - | chr8_4:7357631-7357650 | Msa1310740:intron | 15.0% |
| !! | ATAAAACACAATAAAGTATA+TGG | + | chr8_4:7357876-7357895 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr8_4:7358106-7358125 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr8_4:7358209-7358228 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8_4:7358233-7358252 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8_4:7358232-7358251 | Msa1310740:intron | 15.0% |
| !!! | CTTTTAATATACAGAATAAA+TGG | + | chr8_4:7358431-7358450 | None:intergenic | 15.0% |
| !!! | TATTTTATTTATACAGATAG+TGG | + | chr8_4:7358540-7358559 | None:intergenic | 15.0% |
| !! | TTTGAATCAAGAAAATTAAT+TGG | + | chr8_4:7359750-7359769 | None:intergenic | 15.0% |
| !!! | AATTAATTTTCTTGATTCAA+AGG | - | chr8_4:7359749-7359768 | Msa1310740:intron | 15.0% |
| !!! | ATTAATTTTCTTGATTCAAA+GGG | - | chr8_4:7359750-7359769 | Msa1310740:intron | 15.0% |
| !! | AATAATTAAGATGTTTAGAT+TGG | - | chr8_4:7359788-7359807 | Msa1310740:intron | 15.0% |
| !!! | AAATGTTTTTAATATAAGCA+AGG | - | chr8_4:7360588-7360607 | Msa1310740:five_prime_UTR | 15.0% |
| !!! | AATGTTTTTAATATAAGCAA+GGG | - | chr8_4:7360589-7360608 | Msa1310740:five_prime_UTR | 15.0% |
| !! | TTATATAAAGGAAACATATA+GGG | + | chr8_4:7360692-7360711 | None:intergenic | 15.0% |
| !!! | TTTTTCTCTTTTTTCTAATC+TGG | - | chr8_4:7356073-7356092 | Msa1310740:CDS | 20.0% |
| !!! | TTTTCTCTTTTTTCTAATCT+GGG | - | chr8_4:7356074-7356093 | Msa1310740:CDS | 20.0% |
| !! | TTTAATATCAAAAGTGATTC+TGG | - | chr8_4:7356578-7356597 | Msa1310740:intron | 20.0% |
| !! | AATGTAAATGTACGTTTAAT+TGG | + | chr8_4:7356690-7356709 | None:intergenic | 20.0% |
| !! | TTGAAAGTAAAAATCACATT+TGG | + | chr8_4:7356821-7356840 | None:intergenic | 20.0% |
| !!! | TATTATTGTTTTTAGCCATA+TGG | - | chr8_4:7356971-7356990 | Msa1310740:intron | 20.0% |
| !!! | ATTATTGTTTTTAGCCATAT+GGG | - | chr8_4:7356972-7356991 | Msa1310740:intron | 20.0% |
| !!! | TATTGTTTTTATTATTACGG+TGG | - | chr8_4:7357363-7357382 | Msa1310740:intron | 20.0% |
| !! | TATATGAACTATTAACATAC+CGG | + | chr8_4:7357465-7357484 | None:intergenic | 20.0% |
| !! | GATGATAATTAGTATTCTAA+TGG | - | chr8_4:7357489-7357508 | Msa1310740:intron | 20.0% |
| !!! | ACTTTATTGTGTTTTATGTT+TGG | - | chr8_4:7357879-7357898 | Msa1310740:intron | 20.0% |
| !! | TATATGCATATTTCCAAATT+TGG | - | chr8_4:7357908-7357927 | Msa1310740:intron | 20.0% |
| !! | TTTGATATATAAAGTCATCA+TGG | + | chr8_4:7358040-7358059 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8_4:7358146-7358165 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8_4:7358223-7358242 | Msa1310740:intron | 20.0% |
| !!! | TTAGTTGATACATTTACAAA+TGG | + | chr8_4:7358636-7358655 | None:intergenic | 20.0% |
| !!! | ATTTATCTTGAAAAAGCATA+AGG | - | chr8_4:7358694-7358713 | Msa1310740:intron | 20.0% |
| !! | CATATATGAAAAAACATAAC+TGG | - | chr8_4:7358893-7358912 | Msa1310740:intron | 20.0% |
| !! | CTTAAAAGATCTATTTACTT+TGG | + | chr8_4:7359318-7359337 | None:intergenic | 20.0% |
| !!! | ACATTTTGATCTCTTAAATT+TGG | - | chr8_4:7359348-7359367 | Msa1310740:intron | 20.0% |
| !!! | TTTTGCATCATTATTGTTTT+TGG | - | chr8_4:7359915-7359934 | Msa1310740:intron | 20.0% |
| !! | ATTATTATCCTATACAGTAT+GGG | + | chr8_4:7360559-7360578 | None:intergenic | 20.0% |
| !! | AATTATTATCCTATACAGTA+TGG | + | chr8_4:7360560-7360579 | None:intergenic | 20.0% |
| !! | GTTATATAAAGGAAACATAT+AGG | + | chr8_4:7360693-7360712 | None:intergenic | 20.0% |
| ! | ATTCTCTTCAATTGCAAATT+GGG | + | chr8_4:7355771-7355790 | None:intergenic | 25.0% |
| !! | TTCAACATAGTTGATGTTAA+TGG | - | chr8_4:7355950-7355969 | Msa1310740:CDS | 25.0% |
| !!! | AAAATGTTACTTTAGTGTGA+AGG | - | chr8_4:7356126-7356145 | Msa1310740:CDS | 25.0% |
| !! | AAGATTGTGTTTTTCTTATC+CGG | - | chr8_4:7356217-7356236 | Msa1310740:CDS | 25.0% |
| ! | TATCAATTTGTGTGTTCATT+TGG | - | chr8_4:7356317-7356336 | Msa1310740:CDS | 25.0% |
| !! | TAGACACATAATTCATTTTG+AGG | - | chr8_4:7356520-7356539 | Msa1310740:intron | 25.0% |
| !!! | CATAATTCATTTTGAGGAAT+TGG | - | chr8_4:7356526-7356545 | Msa1310740:intron | 25.0% |
| ! | TTTGACATGTTTGATACAAT+TGG | - | chr8_4:7356614-7356633 | Msa1310740:intron | 25.0% |
| ! | ATGTTTGATACAATTGGAAT+TGG | - | chr8_4:7356620-7356639 | Msa1310740:intron | 25.0% |
| ! | AAATGTACGTTTAATTGGTT+GGG | + | chr8_4:7356685-7356704 | None:intergenic | 25.0% |
| ! | TAAATGTACGTTTAATTGGT+TGG | + | chr8_4:7356686-7356705 | None:intergenic | 25.0% |
| ! | AAAATGCTACCAATAATCTA+GGG | - | chr8_4:7357149-7357168 | Msa1310740:intron | 25.0% |
| ! | AACTATAACTCTATGAAAGA+AGG | + | chr8_4:7357276-7357295 | None:intergenic | 25.0% |
| !! | GTTTCTTACAAAGTATCTTA+TGG | - | chr8_4:7357293-7357312 | Msa1310740:intron | 25.0% |
| !! | AACAAACATTCAGTTTTTGT+AGG | - | chr8_4:7357429-7357448 | Msa1310740:intron | 25.0% |
| !! | ACAAACATTCAGTTTTTGTA+GGG | - | chr8_4:7357430-7357449 | Msa1310740:intron | 25.0% |
| ! | GATAATTAGTATTCTAATGG+TGG | - | chr8_4:7357492-7357511 | Msa1310740:intron | 25.0% |
| ! | ATTGGAATCAAATCCAAATT+TGG | + | chr8_4:7357924-7357943 | None:intergenic | 25.0% |
| ! | TAGAAAATGAAGCTATCAAT+TGG | + | chr8_4:7357942-7357961 | None:intergenic | 25.0% |
| ! | AATGATTAAGAGAAAGTGAA+TGG | + | chr8_4:7358266-7358285 | None:intergenic | 25.0% |
| ! | TTAATTAAACATCACGCAAT+TGG | + | chr8_4:7358591-7358610 | None:intergenic | 25.0% |
| ! | TTCATGATAACTTAAGCATT+TGG | - | chr8_4:7358961-7358980 | Msa1310740:intron | 25.0% |
| ! | TCTCTTAAATTTGGATCATT+TGG | - | chr8_4:7359357-7359376 | Msa1310740:intron | 25.0% |
| ! | CTCCATAAAATGTAAGAATT+GGG | - | chr8_4:7359382-7359401 | Msa1310740:intron | 25.0% |
| !! | AACCCAATTCTTACATTTTA+TGG | + | chr8_4:7359387-7359406 | None:intergenic | 25.0% |
| ! | TTCTATAATCAGTCAGAAAT+AGG | + | chr8_4:7359522-7359541 | None:intergenic | 25.0% |
| !!! | TATTTTAGTTTGAAGAGAGT+TGG | - | chr8_4:7359861-7359880 | Msa1310740:intron | 25.0% |
| ! | AACAATAATGATGCAAAAGT+AGG | + | chr8_4:7359913-7359932 | None:intergenic | 25.0% |
| !! | ATGTAATGAATGCATTGATA+GGG | + | chr8_4:7360471-7360490 | None:intergenic | 25.0% |
| TTCTCTTCAATTGCAAATTG+GGG | + | chr8_4:7355770-7355789 | None:intergenic | 30.0% | |
| GATTCTCTTCAATTGCAAAT+TGG | + | chr8_4:7355772-7355791 | None:intergenic | 30.0% | |
| ATTAGTGTGTGTGAAGAAAA+TGG | - | chr8_4:7355796-7355815 | Msa1310740:three_prime_UTR | 30.0% | |
| AACGATTACTTATCATGTTG+TGG | - | chr8_4:7355842-7355861 | Msa1310740:three_prime_UTR | 30.0% | |
| TATGTTGAACCAAATGTGTT+TGG | + | chr8_4:7355939-7355958 | None:intergenic | 30.0% | |
| ! | ACATAGTTGATGTTAATGGT+TGG | - | chr8_4:7355954-7355973 | Msa1310740:CDS | 30.0% |
| ! | AAGGATGTGTTTTTCTTATC+TGG | - | chr8_4:7356145-7356164 | Msa1310740:CDS | 30.0% |
| ! | AGGATGTGTTTTTCTTATCT+GGG | - | chr8_4:7356146-7356165 | Msa1310740:CDS | 30.0% |
| ! | AGATTGTGTTTTTCTTATCC+GGG | - | chr8_4:7356218-7356237 | Msa1310740:CDS | 30.0% |
| ! | AAGGTTGTGTTTTTCTTATG+TGG | - | chr8_4:7356289-7356308 | Msa1310740:CDS | 30.0% |
| ! | AGGTTGTGTTTTTCTTATGT+GGG | - | chr8_4:7356290-7356309 | Msa1310740:CDS | 30.0% |
| ! | GTGTGTTCATTTGGATTTTT+AGG | - | chr8_4:7356326-7356345 | Msa1310740:CDS | 30.0% |
| TTGAAGTGAAAACTTGATTG+TGG | - | chr8_4:7356362-7356381 | Msa1310740:CDS | 30.0% | |
| !! | TTGTGGATTATTGTTGTTTG+TGG | - | chr8_4:7356379-7356398 | Msa1310740:intron | 30.0% |
| !! | TCATTTTGAGGAATTGGTTT+TGG | - | chr8_4:7356532-7356551 | Msa1310740:intron | 30.0% |
| ! | CATGTAGAAGAAACTCATTT+TGG | - | chr8_4:7357040-7357059 | Msa1310740:intron | 30.0% |
| GAAAATGCTACCAATAATCT+AGG | - | chr8_4:7357148-7357167 | Msa1310740:intron | 30.0% | |
| CATTTGTTCATCAACGAAAT+TGG | - | chr8_4:7357392-7357411 | Msa1310740:intron | 30.0% | |
| TTCATCAACGAAATTGGATT+TGG | - | chr8_4:7357398-7357417 | Msa1310740:intron | 30.0% | |
| TCATCAACGAAATTGGATTT+GGG | - | chr8_4:7357399-7357418 | Msa1310740:intron | 30.0% | |
| AAAACTGAATGTTTGTTTCC+CGG | + | chr8_4:7357426-7357445 | None:intergenic | 30.0% | |
| ! | TTTTGTAGGGTTAATGTAAC+CGG | - | chr8_4:7357443-7357462 | Msa1310740:intron | 30.0% |
| TATTTCTTGTATGTGCATCT+GGG | - | chr8_4:7357579-7357598 | Msa1310740:intron | 30.0% | |
| GCAATCTCAAATTCAACAAT+TGG | + | chr8_4:7357725-7357744 | None:intergenic | 30.0% | |
| TCATCATGGTATATTATGAG+TGG | + | chr8_4:7358026-7358045 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8_4:7358314-7358333 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8_4:7358315-7358334 | Msa1310740:intron | 30.0% |
| !! | TGGTGATGGTTGATTATAAA+CGG | + | chr8_4:7358356-7358375 | None:intergenic | 30.0% |
| ! | TTGAAAAAGCATAAGGTGTT+TGG | - | chr8_4:7358701-7358720 | Msa1310740:intron | 30.0% |
| ! | GTTGGTATAGTTTAAGTTAC+TGG | - | chr8_4:7358728-7358747 | Msa1310740:intron | 30.0% |
| !! | TTTTACCATTTTGAGTAGTC+AGG | - | chr8_4:7358764-7358783 | Msa1310740:CDS | 30.0% |
| !! | CAGGCTTTTTCTTTTTTCTT+TGG | - | chr8_4:7358783-7358802 | Msa1310740:CDS | 30.0% |
| ATGCACAATTAGCAAGTTAT+GGG | + | chr8_4:7358876-7358895 | None:intergenic | 30.0% | |
| TATGCACAATTAGCAAGTTA+TGG | + | chr8_4:7358877-7358896 | None:intergenic | 30.0% | |
| ! | GGTATATGAAATTTTCTGTC+TGG | - | chr8_4:7358914-7358933 | Msa1310740:intron | 30.0% |
| TTGTCAGAAGATAAGTTCTT+CGG | + | chr8_4:7359087-7359106 | None:intergenic | 30.0% | |
| AACTTATCTTCTGACAAAAC+TGG | - | chr8_4:7359090-7359109 | Msa1310740:intron | 30.0% | |
| !! | ACACATGCTAAACTTGTTAA+AGG | - | chr8_4:7359277-7359296 | Msa1310740:CDS | 30.0% |
| !! | ATGCTAAACTTGTTAAAGGA+AGG | - | chr8_4:7359281-7359300 | Msa1310740:CDS | 30.0% |
| ! | CCAATTCTTACATTTTATGG+AGG | + | chr8_4:7359384-7359403 | None:intergenic | 30.0% |
| CCTCCATAAAATGTAAGAAT+TGG | - | chr8_4:7359381-7359400 | Msa1310740:intron | 30.0% | |
| AGGACAAATATCACAATCTT+GGG | + | chr8_4:7359502-7359521 | None:intergenic | 30.0% | |
| TAGGACAAATATCACAATCT+TGG | + | chr8_4:7359503-7359522 | None:intergenic | 30.0% | |
| ! | AGAGATTTTCTTAAGCAAAG+AGG | + | chr8_4:7359654-7359673 | None:intergenic | 30.0% |
| ATCTCTTTCATGTATTTCTC+AGG | - | chr8_4:7359668-7359687 | Msa1310740:intron | 30.0% | |
| TCAAACACAATAGTTGCATA+TGG | + | chr8_4:7360343-7360362 | None:intergenic | 30.0% | |
| ! | CATGTAATGAATGCATTGAT+AGG | + | chr8_4:7360472-7360491 | None:intergenic | 30.0% |
| CATTACATGCATTGAATATC+TGG | - | chr8_4:7360483-7360502 | Msa1310740:CDS | 30.0% | |
| ! | ATCTGGAAGTTTTTATGAAG+TGG | - | chr8_4:7360500-7360519 | Msa1310740:CDS | 30.0% |
| ATGAAGTGGAATTGTATTTG+TGG | - | chr8_4:7360514-7360533 | Msa1310740:CDS | 30.0% | |
| GAAGTCTGAACAATAAGTAG+TGG | - | chr8_4:7355669-7355688 | Msa1310740:three_prime_UTR | 35.0% | |
| TGTGTGAAGAAAATGGAAGT+GGG | - | chr8_4:7355803-7355822 | Msa1310740:three_prime_UTR | 35.0% | |
| GTTGTTTGTGGCTTCATATT+TGG | - | chr8_4:7356391-7356410 | Msa1310740:intron | 35.0% | |
| ! | AGTTGAGTGTATGTTAGCTT+GGG | - | chr8_4:7356655-7356674 | Msa1310740:intron | 35.0% |
| !! | TAGAAGAAACTCATTTTGGC+AGG | - | chr8_4:7357044-7357063 | Msa1310740:intron | 35.0% |
| !! | TTCTACTGCTTCTAGTTTAC+AGG | - | chr8_4:7357102-7357121 | Msa1310740:intron | 35.0% |
| ! | TCAACTTTTGCATCCTTCAT+TGG | - | chr8_4:7357318-7357337 | Msa1310740:intron | 35.0% |
| !!! | GTGGTTTGTTTGACTTTTGT+AGG | - | chr8_4:7357511-7357530 | Msa1310740:intron | 35.0% |
| ! | TTTTGTAGGAACTAGCTGAA+TGG | - | chr8_4:7357525-7357544 | Msa1310740:intron | 35.0% |
| CTCGGTATATGCAAAAGTTT+GGG | - | chr8_4:7357552-7357571 | Msa1310740:intron | 35.0% | |
| GTATTTCTTGTATGTGCATC+TGG | - | chr8_4:7357578-7357597 | Msa1310740:intron | 35.0% | |
| TACTTGTAAAGAGCTTTGCA+AGG | + | chr8_4:7357781-7357800 | None:intergenic | 35.0% | |
| AACCCTTGCACTATTGAATT+CGG | - | chr8_4:7357982-7358001 | Msa1310740:intron | 35.0% | |
| AACCGAATTCAATAGTGCAA+GGG | + | chr8_4:7357987-7358006 | None:intergenic | 35.0% | |
| TAACCGAATTCAATAGTGCA+AGG | + | chr8_4:7357988-7358007 | None:intergenic | 35.0% | |
| TGCACTATTGAATTCGGTTA+AGG | - | chr8_4:7357988-7358007 | Msa1310740:intron | 35.0% | |
| CATGGTATATTATGAGTGGA+TGG | + | chr8_4:7358022-7358041 | None:intergenic | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8_4:7358080-7358099 | None:intergenic | 35.0% |
| TGTGCAGTGTATTAATTGGA+GGG | + | chr8_4:7358180-7358199 | None:intergenic | 35.0% | |
| GTAGTGTGCAGTGTATTAAT+TGG | + | chr8_4:7358184-7358203 | None:intergenic | 35.0% | |
| !! | AAAAAGTTGTGACTTGGTGA+TGG | + | chr8_4:7358370-7358389 | None:intergenic | 35.0% |
| CTAGACAAAAAGTTGTGACT+TGG | + | chr8_4:7358376-7358395 | None:intergenic | 35.0% | |
| ! | ACTTTTTGTCTAGAAGTAGC+AGG | - | chr8_4:7358383-7358402 | Msa1310740:intron | 35.0% |
| ! | AAAGCATAAGGTGTTTGGTT+TGG | - | chr8_4:7358706-7358725 | Msa1310740:intron | 35.0% |
| AAAAGCCTGACTACTCAAAA+TGG | + | chr8_4:7358772-7358791 | None:intergenic | 35.0% | |
| GGAAAAAAGACACAATCTCA+AGG | + | chr8_4:7358854-7358873 | None:intergenic | 35.0% | |
| TGCACAATTAGCAAGTTATG+GGG | + | chr8_4:7358875-7358894 | None:intergenic | 35.0% | |
| TGGATATAAATCCATTCCGA+AGG | - | chr8_4:7359056-7359075 | Msa1310740:intron | 35.0% | |
| ! | TAAAGACGCACATTAACTTG+TGG | - | chr8_4:7359126-7359145 | Msa1310740:intron | 35.0% |
| !! | AAAGACGCACATTAACTTGT+GGG | - | chr8_4:7359127-7359146 | Msa1310740:intron | 35.0% |
| !! | CTAAACTTGTTAAAGGAAGG+TGG | - | chr8_4:7359284-7359303 | Msa1310740:CDS | 35.0% |
| !! | CTTGATTCAAAGGGTATTTC+AGG | - | chr8_4:7359759-7359778 | Msa1310740:intron | 35.0% |
| CAAAAGATAGACATGTCGAA+TGG | + | chr8_4:7359837-7359856 | None:intergenic | 35.0% | |
| GAAGTTCGTGTAAGCATTAT+TGG | - | chr8_4:7359989-7360008 | Msa1310740:intron | 35.0% | |
| AAATCCTAGAGTCACAGAAA+AGG | - | chr8_4:7360362-7360381 | Msa1310740:CDS | 35.0% | |
| AATCCTAGAGTCACAGAAAA+GGG | - | chr8_4:7360363-7360382 | Msa1310740:CDS | 35.0% | |
| !! | CATATTTCTTCTAGCTTCCA+CGG | + | chr8_4:7360438-7360457 | None:intergenic | 35.0% |
| GTGGAAGCTAGAAGAAATAT+GGG | - | chr8_4:7360437-7360456 | Msa1310740:CDS | 35.0% | |
| ATGTAATGCCCATACTGTAT+AGG | - | chr8_4:7360548-7360567 | Msa1310740:CDS | 35.0% | |
| TCTCCTTTCTCAATAATAGC+AGG | - | chr8_4:7360652-7360671 | Msa1310740:five_prime_UTR | 35.0% | |
| CTCCTTTCTCAATAATAGCA+GGG | - | chr8_4:7360653-7360672 | Msa1310740:five_prime_UTR | 35.0% | |
| GTCTGAACAATAAGTAGTGG+TGG | - | chr8_4:7355672-7355691 | Msa1310740:three_prime_UTR | 40.0% | |
| !! | CAAATTGGGGCTTTGGAATT+TGG | + | chr8_4:7355757-7355776 | None:intergenic | 40.0% |
| TCAATTGCAAATTGGGGCTT+TGG | + | chr8_4:7355764-7355783 | None:intergenic | 40.0% | |
| GTGTGTGAAGAAAATGGAAG+TGG | - | chr8_4:7355802-7355821 | Msa1310740:three_prime_UTR | 40.0% | |
| AAGAAAATGGAAGTGGGTGT+AGG | - | chr8_4:7355809-7355828 | Msa1310740:three_prime_UTR | 40.0% | |
| GAACCAAATGTGTTTGGCAA+CGG | + | chr8_4:7355933-7355952 | None:intergenic | 40.0% | |
| ATACAAAAGAGAGAGAGACC+CGG | + | chr8_4:7356239-7356258 | None:intergenic | 40.0% | |
| GTTTGTGGCTTCATATTTGG+CGG | - | chr8_4:7356394-7356413 | Msa1310740:intron | 40.0% | |
| GAGTTGAGTGTATGTTAGCT+TGG | - | chr8_4:7356654-7356673 | Msa1310740:intron | 40.0% | |
| TATAGGATGCTCTAATCGCA+GGG | + | chr8_4:7356741-7356760 | None:intergenic | 40.0% | |
| ATATAGGATGCTCTAATCGC+AGG | + | chr8_4:7356742-7356761 | None:intergenic | 40.0% | |
| ! | CGATTAGAGCATCCTATATG+CGG | - | chr8_4:7356743-7356762 | Msa1310740:intron | 40.0% |
| GTATGTCTTGAACCGCATAT+AGG | + | chr8_4:7356758-7356777 | None:intergenic | 40.0% | |
| ATGCGGTTCAAGACATACAA+TGG | - | chr8_4:7356760-7356779 | Msa1310740:intron | 40.0% | |
| TAATAGAGTCCGTGCATGTT+TGG | + | chr8_4:7356956-7356975 | None:intergenic | 40.0% | |
| AGAGAAGAAAGCAACCCATA+TGG | + | chr8_4:7356989-7357008 | None:intergenic | 40.0% | |
| !! | AAGAAACTCATTTTGGCAGG+TGG | - | chr8_4:7357047-7357066 | Msa1310740:intron | 40.0% |
| ACGAAACAGCCCTAGATTAT+TGG | + | chr8_4:7357161-7357180 | None:intergenic | 40.0% | |
| ACAATAACGAACCATGATGC+AGG | + | chr8_4:7357349-7357368 | None:intergenic | 40.0% | |
| ! | AACGAAATTGGATTTGGGAC+CGG | - | chr8_4:7357404-7357423 | Msa1310740:intron | 40.0% |
| AACTAGCTGAATGGAATGCT+CGG | - | chr8_4:7357534-7357553 | Msa1310740:intron | 40.0% | |
| GCTCGGTATATGCAAAAGTT+TGG | - | chr8_4:7357551-7357570 | Msa1310740:intron | 40.0% | |
| ! | ATCGCTACTTGCTGAACTAA+AGG | - | chr8_4:7357613-7357632 | Msa1310740:intron | 40.0% |
| ! | TGAATTTGAGATTGCAGCTC+AGG | - | chr8_4:7357730-7357749 | Msa1310740:intron | 40.0% |
| ! | AAACGGAGGGAGTATATCAT+AGG | + | chr8_4:7358063-7358082 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_4:7358319-7358338 | None:intergenic | 40.0% |
| GTGTGCAGTGTATTAATTGG+AGG | + | chr8_4:7358181-7358200 | None:intergenic | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8_4:7358319-7358338 | Msa1310740:intron | 40.0% |
| !! | CATAAGGTGTTTGGTTTGGT+TGG | - | chr8_4:7358710-7358729 | Msa1310740:intron | 40.0% |
| TCTGCATGTTGTCATGTCTT+GGG | - | chr8_4:7359012-7359031 | Msa1310740:intron | 40.0% | |
| ! | TGAGCATTGTGTTCTTCTCA+GGG | - | chr8_4:7359232-7359251 | Msa1310740:intron | 40.0% |
| !! | AGAACTTAGAAGTGCTGCAT+TGG | + | chr8_4:7359418-7359437 | None:intergenic | 40.0% |
| !! | CTAAGTTCTGAAGCTTTCCT+TGG | - | chr8_4:7359429-7359448 | Msa1310740:intron | 40.0% |
| ! | TTGGAAACCCTTCACCTTTT+TGG | - | chr8_4:7359552-7359571 | Msa1310740:intron | 40.0% |
| GTTCGTGTAAGCATTATTGG+TGG | - | chr8_4:7359992-7360011 | Msa1310740:intron | 40.0% | |
| GCTGCTTCAAACACTTTAAC+AGG | - | chr8_4:7360025-7360044 | Msa1310740:intron | 40.0% | |
| CCATCTGTAATCCCAAATGT+CGG | + | chr8_4:7360178-7360197 | None:intergenic | 40.0% | |
| ! | ACATTTGGGATTACAGATGG+TGG | - | chr8_4:7360178-7360197 | Msa1310740:intron | 40.0% |
| !! | GATGGACATAGTTGATGATG+TGG | - | chr8_4:7360258-7360277 | Msa1310740:intron | 40.0% |
| !! | ATAGTTGATGATGTGGATCC+AGG | - | chr8_4:7360265-7360284 | Msa1310740:intron | 40.0% |
| !! | TAGTTGATGATGTGGATCCA+GGG | - | chr8_4:7360266-7360285 | Msa1310740:intron | 40.0% |
| AAGGTTAACCTGTATATCCC+TGG | + | chr8_4:7360286-7360305 | None:intergenic | 40.0% | |
| TACAGGTTAACCTTCAACAC+TGG | - | chr8_4:7360292-7360311 | Msa1310740:intron | 40.0% | |
| ACAGGTTAACCTTCAACACT+GGG | - | chr8_4:7360293-7360312 | Msa1310740:intron | 40.0% | |
| ! | ATTGTACTTCCCAGTGTTGA+AGG | + | chr8_4:7360305-7360324 | None:intergenic | 40.0% |
| GCATATGGAAAGAAACCAGT+TGG | + | chr8_4:7360328-7360347 | None:intergenic | 40.0% | |
| !! | CGGTAAGTGCTGAATGAAAA+TGG | + | chr8_4:7360418-7360437 | None:intergenic | 40.0% |
| ! | TTTTCATTCAGCACTTACCG+TGG | - | chr8_4:7360418-7360437 | Msa1310740:CDS | 40.0% |
| CGTGGAAGCTAGAAGAAATA+TGG | - | chr8_4:7360436-7360455 | Msa1310740:CDS | 40.0% | |
| GACCCTGCTATTATTGAGAA+AGG | + | chr8_4:7360658-7360677 | None:intergenic | 40.0% | |
| CACCAAATTCGCCAAGGAAA+TGG | - | chr8_4:7355868-7355887 | Msa1310740:three_prime_UTR | 45.0% | |
| AGCCATTTCCTTGGCGAATT+TGG | + | chr8_4:7355873-7355892 | None:intergenic | 45.0% | |
| TCACCGTTGCCAAACACATT+TGG | - | chr8_4:7355927-7355946 | Msa1310740:exon | 45.0% | |
| TTCTCTGCTCATCCTTCCAT+TGG | - | chr8_4:7355986-7356005 | Msa1310740:CDS | 45.0% | |
| ! | TTGCAGAAGCATGAGAAGGA+GGG | + | chr8_4:7356021-7356040 | None:intergenic | 45.0% |
| ! | CTTGTTGCAGAAGCATGAGA+AGG | + | chr8_4:7356025-7356044 | None:intergenic | 45.0% |
| !! | TCATTTTGGCAGGTGGAGTA+TGG | - | chr8_4:7357054-7357073 | Msa1310740:intron | 45.0% |
| !! | CATTTTGGCAGGTGGAGTAT+GGG | - | chr8_4:7357055-7357074 | Msa1310740:intron | 45.0% |
| ! | ACGAAATTGGATTTGGGACC+GGG | - | chr8_4:7357405-7357424 | Msa1310740:intron | 45.0% |
| !! | TTGACTTGGAGCAACAGCAA+TGG | + | chr8_4:7357837-7357856 | None:intergenic | 45.0% |
| ! | TTGCTGTTGCTCCAAGTCAA+AGG | - | chr8_4:7357837-7357856 | Msa1310740:intron | 45.0% |
| TGCTGTTGCTCCAAGTCAAA+GGG | - | chr8_4:7357838-7357857 | Msa1310740:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_4:7358318-7358337 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8_4:7358318-7358337 | Msa1310740:intron | 45.0% |
| GAAGTAGCAGGATCACAGTT+TGG | - | chr8_4:7358395-7358414 | Msa1310740:intron | 45.0% | |
| CAAGACATGACAACATGCAG+AGG | + | chr8_4:7359013-7359032 | None:intergenic | 45.0% | |
| CTCTGCATGTTGTCATGTCT+TGG | - | chr8_4:7359011-7359030 | Msa1310740:intron | 45.0% | |
| CTTTGCTTGAGTGGTCATGT+TGG | - | chr8_4:7359036-7359055 | Msa1310740:intron | 45.0% | |
| AAGTTCTTCGGCAAAGCCTT+CGG | + | chr8_4:7359075-7359094 | None:intergenic | 45.0% | |
| ! | GTGAGCATTGTGTTCTTCTC+AGG | - | chr8_4:7359231-7359250 | Msa1310740:intron | 45.0% |
| ATTGTGTTCTTCTCAGGGAG+AGG | - | chr8_4:7359237-7359256 | Msa1310740:intron | 45.0% | |
| CATTGCAGAATGCAGATCCA+AGG | + | chr8_4:7359449-7359468 | None:intergenic | 45.0% | |
| CTTGGATCTGCATTCTGCAA+TGG | - | chr8_4:7359447-7359466 | Msa1310740:intron | 45.0% | |
| !! | AAACCCTTCACCTTTTTGGC+TGG | - | chr8_4:7359556-7359575 | Msa1310740:intron | 45.0% |
| TGTCCAGCCAAAAAGGTGAA+GGG | + | chr8_4:7359562-7359581 | None:intergenic | 45.0% | |
| GCATTTGTGTCCAGCCAAAA+AGG | + | chr8_4:7359569-7359588 | None:intergenic | 45.0% | |
| TTTGGCTGGACACAAATGCT+AGG | - | chr8_4:7359570-7359589 | Msa1310740:intron | 45.0% | |
| TGGACACAAATGCTAGGTCT+AGG | - | chr8_4:7359576-7359595 | Msa1310740:intron | 45.0% | |
| !!! | GGCGGGTTCTAGATGTATTT+TGG | + | chr8_4:7360060-7360079 | None:intergenic | 45.0% |
| ACACGTGAGTGGTAATAGCT+GGG | + | chr8_4:7360081-7360100 | None:intergenic | 45.0% | |
| AACACGTGAGTGGTAATAGC+TGG | + | chr8_4:7360082-7360101 | None:intergenic | 45.0% | |
| AGCTATTACCACTCACGTGT+TGG | - | chr8_4:7360081-7360100 | Msa1310740:intron | 45.0% | |
| AGAAACATCCAACACGTGAG+TGG | + | chr8_4:7360092-7360111 | None:intergenic | 45.0% | |
| CTCACGTGTTGGATGTTTCT+CGG | - | chr8_4:7360092-7360111 | Msa1310740:intron | 45.0% | |
| TCACGTGTTGGATGTTTCTC+GGG | - | chr8_4:7360093-7360112 | Msa1310740:intron | 45.0% | |
| !! | TCCAAAAGCACCTCAATTCC+GGG | + | chr8_4:7360130-7360149 | None:intergenic | 45.0% |
| !! | CTCCAAAAGCACCTCAATTC+CGG | + | chr8_4:7360131-7360150 | None:intergenic | 45.0% |
| ! | CCGACATTTGGGATTACAGA+TGG | - | chr8_4:7360175-7360194 | Msa1310740:intron | 45.0% |
| ! | GATTACAGATGGTGGCTGTT+GGG | - | chr8_4:7360186-7360205 | Msa1310740:intron | 45.0% |
| ! | TCTTCGACAACTGACTCTGA+CGG | - | chr8_4:7360220-7360239 | Msa1310740:intron | 45.0% |
| ATGTGGATCCAGGGATATAC+AGG | - | chr8_4:7360275-7360294 | Msa1310740:intron | 45.0% | |
| ! | ACTGGGAAGTACAATCCAAC+TGG | - | chr8_4:7360310-7360329 | Msa1310740:intron | 45.0% |
| ! | GTTCCCTTTTCTGTGACTCT+AGG | + | chr8_4:7360369-7360388 | None:intergenic | 45.0% |
| GAAAATGGCGAAAGCAACAG+AGG | + | chr8_4:7360403-7360422 | None:intergenic | 45.0% | |
| !! | ATTATAGAAATATATATTAT+TGG | - | chr8_4:7359533-7359552 | Msa1310740:intron | 5.0% |
| !! | GGGGCTTTGGAATTTGGATG+AGG | + | chr8_4:7355751-7355770 | None:intergenic | 50.0% |
| !! | TGGAAGCACCAAATTCGCCA+AGG | - | chr8_4:7355862-7355881 | Msa1310740:three_prime_UTR | 50.0% |
| ! | GTTGCAGAAGCATGAGAAGG+AGG | + | chr8_4:7356022-7356041 | None:intergenic | 50.0% |
| ACCGCTGAACCAAACATGCA+CGG | - | chr8_4:7356944-7356963 | Msa1310740:intron | 50.0% | |
| ! | TCCGTGCATGTTTGGTTCAG+CGG | + | chr8_4:7356948-7356967 | None:intergenic | 50.0% |
| GATGCAGGTCAAGCCAATGA+AGG | + | chr8_4:7357334-7357353 | None:intergenic | 50.0% | |
| !! | CATTGGCTTGACCTGCATCA+TGG | - | chr8_4:7357335-7357354 | Msa1310740:intron | 50.0% |
| GTACCTTCTGCCCTTTGACT+TGG | + | chr8_4:7357851-7357870 | None:intergenic | 50.0% | |
| GTCTTGGGTCTTTGCTTGAG+TGG | - | chr8_4:7359027-7359046 | Msa1310740:intron | 50.0% | |
| GGATCTGCATTCTGCAATGG+TGG | - | chr8_4:7359450-7359469 | Msa1310740:intron | 50.0% | |
| GTGTCCAGCCAAAAAGGTGA+AGG | + | chr8_4:7359563-7359582 | None:intergenic | 50.0% | |
| CACGTGTTGGATGTTTCTCG+GGG | - | chr8_4:7360094-7360113 | Msa1310740:intron | 50.0% | |
| ATATCCAGCTCCCGGAATTG+AGG | - | chr8_4:7360117-7360136 | Msa1310740:intron | 50.0% | |
| !! | TCCCGGAATTGAGGTGCTTT+TGG | - | chr8_4:7360126-7360145 | Msa1310740:intron | 50.0% |
| !! | CGGAATTGAGGTGCTTTTGG+AGG | - | chr8_4:7360129-7360148 | Msa1310740:intron | 50.0% |
| !! | TTGAGGTGCTTTTGGAGGTG+TGG | - | chr8_4:7360134-7360153 | Msa1310740:intron | 50.0% |
| ! | GGATTACAGATGGTGGCTGT+TGG | - | chr8_4:7360185-7360204 | Msa1310740:intron | 50.0% |
| AGAGGCAGCAGCCATTTCCT+TGG | + | chr8_4:7355882-7355901 | None:intergenic | 55.0% | |
| GTGGTAGGAAGGGAAAGGAG+AGG | + | chr8_4:7355900-7355919 | None:intergenic | 55.0% | |
| ! | TGAGAGCACGGTGGTAGGAA+GGG | + | chr8_4:7355910-7355929 | None:intergenic | 55.0% |
| GTTTGGCAACGGTGAGAGCA+CGG | + | chr8_4:7355922-7355941 | None:intergenic | 55.0% | |
| GCTCCAAGTCAAAGGGCAGA+AGG | - | chr8_4:7357845-7357864 | Msa1310740:intron | 55.0% | |
| CTTCGGCAAAGCCTTCGGAA+TGG | + | chr8_4:7359070-7359089 | None:intergenic | 55.0% | |
| GTGAGTGGTAATAGCTGGGC+GGG | + | chr8_4:7360077-7360096 | None:intergenic | 55.0% | |
| CGTGAGTGGTAATAGCTGGG+CGG | + | chr8_4:7360078-7360097 | None:intergenic | 55.0% | |
| !! | AGGTGCTTTTGGAGGTGTGG+AGG | - | chr8_4:7360137-7360156 | Msa1310740:intron | 55.0% |
| !! | GGTGCTTTTGGAGGTGTGGA+GGG | - | chr8_4:7360138-7360157 | Msa1310740:intron | 55.0% |
| !! | GTGCTTTTGGAGGTGTGGAG+GGG | - | chr8_4:7360139-7360158 | Msa1310740:intron | 55.0% |
| ! | TACAGATGGTGGCTGTTGGG+TGG | - | chr8_4:7360189-7360208 | Msa1310740:intron | 55.0% |
| ! | GTGGCTGTTGGGTGGTTCTA+GGG | - | chr8_4:7360197-7360216 | Msa1310740:intron | 55.0% |
| ! | ACTGACTCTGACGGTCGTAG+CGG | - | chr8_4:7360229-7360248 | Msa1310740:intron | 55.0% |
| GCACGGTGGTAGGAAGGGAA+AGG | + | chr8_4:7355905-7355924 | None:intergenic | 60.0% | |
| ! | GTGAGAGCACGGTGGTAGGA+AGG | + | chr8_4:7355911-7355930 | None:intergenic | 60.0% |
| ! | AACGGTGAGAGCACGGTGGT+AGG | + | chr8_4:7355915-7355934 | None:intergenic | 60.0% |
| GGGCGAGGTTGACCAATGGA+AGG | + | chr8_4:7356001-7356020 | None:intergenic | 60.0% | |
| AGGAGGGCGAGGTTGACCAA+TGG | + | chr8_4:7356005-7356024 | None:intergenic | 60.0% | |
| GAAGCATGAGAAGGAGGGCG+AGG | + | chr8_4:7356016-7356035 | None:intergenic | 60.0% | |
| TCTCGGGGATATCCAGCTCC+CGG | - | chr8_4:7360109-7360128 | Msa1310740:intron | 60.0% | |
| AGCACCTCAATTCCGGGAGC+TGG | + | chr8_4:7360124-7360143 | None:intergenic | 60.0% | |
| GGTGGCTGTTGGGTGGTTCT+AGG | - | chr8_4:7360196-7360215 | Msa1310740:intron | 60.0% | |
| CGGTCGTAGCGGTCAACTGA+TGG | - | chr8_4:7360240-7360259 | Msa1310740:intron | 60.0% | |
| ! | TGGCAACGGTGAGAGCACGG+TGG | + | chr8_4:7355919-7355938 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 7355665 | 7360720 | 7355665 | ID=Msa1310740;Name=Msa1310740 |
| chr8_4 | mRNA | 7355665 | 7360720 | 7355665 | ID=Msa1310740-mRNA-1;Parent=Msa1310740;Name=Msa1310740-mRNA-1;_AED=0.26;_eAED=0.26;_QI=150|1|1|1|1|1|5|273|338 |
| chr8_4 | exon | 7355665 | 7356395 | 7355665 | ID=Msa1310740-mRNA-1:exon:2669;Parent=Msa1310740-mRNA-1 |
| chr8_4 | exon | 7358519 | 7358681 | 7358519 | ID=Msa1310740-mRNA-1:exon:2668;Parent=Msa1310740-mRNA-1 |
| chr8_4 | exon | 7358751 | 7358852 | 7358751 | ID=Msa1310740-mRNA-1:exon:2667;Parent=Msa1310740-mRNA-1 |
| chr8_4 | exon | 7359262 | 7359319 | 7359262 | ID=Msa1310740-mRNA-1:exon:2666;Parent=Msa1310740-mRNA-1 |
| chr8_4 | exon | 7360335 | 7360720 | 7360335 | ID=Msa1310740-mRNA-1:exon:2665;Parent=Msa1310740-mRNA-1 |
| chr8_4 | five_prime_UTR | 7360571 | 7360720 | 7360571 | ID=Msa1310740-mRNA-1:five_prime_utr;Parent=Msa1310740-mRNA-1 |
| chr8_4 | CDS | 7360335 | 7360570 | 7360335 | ID=Msa1310740-mRNA-1:cds;Parent=Msa1310740-mRNA-1 |
| chr8_4 | CDS | 7359262 | 7359319 | 7359262 | ID=Msa1310740-mRNA-1:cds;Parent=Msa1310740-mRNA-1 |
| chr8_4 | CDS | 7358751 | 7358852 | 7358751 | ID=Msa1310740-mRNA-1:cds;Parent=Msa1310740-mRNA-1 |
| chr8_4 | CDS | 7358519 | 7358681 | 7358519 | ID=Msa1310740-mRNA-1:cds;Parent=Msa1310740-mRNA-1 |
| chr8_4 | CDS | 7355938 | 7356395 | 7355938 | ID=Msa1310740-mRNA-1:cds;Parent=Msa1310740-mRNA-1 |
| chr8_4 | three_prime_UTR | 7355665 | 7355937 | 7355665 | ID=Msa1310740-mRNA-1:three_prime_utr;Parent=Msa1310740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
