Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1311180 | sp|Q9SW95|SYNC2_ARATH | 54.662 | 622 | 263 | 9 | 27 | 633 | 21 | 638 | 0.0 | 659 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1311180 | G7LED0 | 96.840 | 633 | 20 | 0 | 1 | 633 | 1 | 633 | 0.0 | 1264 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0782750 | Msa1311180 | 0.815209 | 1.039182e-51 | -8.615850e-47 |
Msa1311180 | Msa1415540 | 0.801139 | 1.036567e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1311180 | MtrunA17_Chr8g0338601 | 96.840 | 633 | 20 | 0 | 1 | 633 | 1 | 633 | 0.0 | 1264 |
Msa1311180 | MtrunA17_Chr8g0389541 | 46.382 | 539 | 277 | 7 | 103 | 632 | 15 | 550 | 1.10e-171 | 500 |
Msa1311180 | MtrunA17_Chr7g0263951 | 42.955 | 582 | 274 | 15 | 100 | 632 | 30 | 602 | 2.70e-150 | 447 |
Msa1311180 | MtrunA17_Chr4g0056161 | 43.023 | 172 | 96 | 2 | 359 | 529 | 271 | 441 | 1.17e-40 | 154 |
Msa1311180 | MtrunA17_Chr4g0056151 | 53.000 | 100 | 46 | 1 | 529 | 627 | 29 | 128 | 1.15e-29 | 114 |
Msa1311180 | MtrunA17_Chr1g0150111 | 23.420 | 269 | 185 | 9 | 367 | 626 | 278 | 534 | 1.46e-11 | 67.4 |
Msa1311180 | MtrunA17_Chr5g0410321 | 23.256 | 258 | 183 | 9 | 375 | 626 | 351 | 599 | 5.67e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1311180 | AT3G07420.1 | 54.662 | 622 | 263 | 9 | 27 | 633 | 21 | 638 | 0.0 | 659 |
Msa1311180 | AT3G07420.2 | 52.200 | 500 | 221 | 8 | 27 | 512 | 21 | 516 | 7.60e-167 | 488 |
Msa1311180 | AT5G56680.1 | 44.640 | 569 | 298 | 8 | 77 | 632 | 7 | 571 | 1.56e-162 | 478 |
Msa1311180 | AT1G70980.1 | 43.433 | 571 | 304 | 10 | 74 | 632 | 7 | 570 | 1.44e-154 | 457 |
Msa1311180 | AT4G17300.1 | 39.024 | 533 | 248 | 14 | 107 | 627 | 94 | 561 | 2.71e-111 | 346 |
Msa1311180 | AT4G17300.2 | 38.649 | 533 | 250 | 13 | 107 | 627 | 114 | 581 | 3.04e-110 | 343 |
Msa1311180 | AT1G68420.1 | 44.156 | 77 | 43 | 0 | 390 | 466 | 1 | 77 | 3.01e-22 | 91.7 |
Msa1311180 | AT4G26870.1 | 24.060 | 266 | 187 | 8 | 367 | 626 | 269 | 525 | 8.19e-15 | 78.2 |
Msa1311180 | AT4G31180.1 | 24.324 | 259 | 179 | 7 | 375 | 626 | 303 | 551 | 3.66e-14 | 76.3 |
Msa1311180 | AT4G31180.2 | 24.324 | 259 | 179 | 7 | 375 | 626 | 303 | 551 | 3.66e-14 | 76.3 |
Find 146 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAACAATTAATTATATTT+TGG | 0.151590 | 8_4:+7862139 | Msa1311180:exon |
CACTCTAAGGTTTGACCTTA+TGG | 0.152415 | 8_4:+7862051 | Msa1311180:CDS |
TATTGCCATTCCAATCTTTA+TGG | 0.160570 | 8_4:+7862192 | Msa1311180:three_prime_UTR |
TAGTTGTTCGAGGCCGAAAA+TGG | 0.182068 | 8_4:-7859678 | None:intergenic |
TACTTAGATCTTTGTCTAAA+TGG | 0.191154 | 8_4:+7862007 | Msa1311180:CDS |
GGGTTCTTGGGTTTGCATTT+TGG | 0.197678 | 8_4:-7858402 | None:intergenic |
TCATTGTAGGAAATTATTTC+AGG | 0.237774 | 8_4:-7861151 | None:intergenic |
GCAAGTATGGTCAATTCTTT+TGG | 0.255458 | 8_4:-7861095 | None:intergenic |
TAGATAAACGGTGGAAGATT+TGG | 0.258493 | 8_4:-7858780 | None:intergenic |
TCCTTTGATTCGTAATATAA+TGG | 0.260762 | 8_4:+7858685 | Msa1311180:CDS |
ACCCGGTTTGAGTATTTAAA+AGG | 0.263270 | 8_4:-7858467 | None:intergenic |
GTTCTACTGAACCGGGTTCT+TGG | 0.267088 | 8_4:-7858415 | None:intergenic |
CAGGTTGGAACTATAATTTC+TGG | 0.270152 | 8_4:+7861684 | Msa1311180:intron |
GTACCTCTGTGAGCGGGTTT+TGG | 0.287072 | 8_4:+7861042 | Msa1311180:CDS |
TCTGAAACAAAGTTTGATTC+AGG | 0.291073 | 8_4:+7861333 | Msa1311180:CDS |
AAAATTGGGAACTTCATTAA+AGG | 0.291848 | 8_4:+7860595 | Msa1311180:CDS |
CAGTAAGCCGCTCCTCATTT+TGG | 0.293097 | 8_4:-7861710 | None:intergenic |
GAAACACGCTATTCAGTTAA+AGG | 0.298326 | 8_4:+7859564 | Msa1311180:CDS |
TTGGCCTTGTCATAGCTTCT+TGG | 0.301625 | 8_4:-7862121 | None:intergenic |
TGCTAAGTCCAGTTGTAAAA+AGG | 0.311493 | 8_4:-7862075 | None:intergenic |
ACAATGTATAACTGTATATA+AGG | 0.314664 | 8_4:+7862271 | Msa1311180:three_prime_UTR |
TTCATCTGTTGCCACGCTTC+AGG | 0.316021 | 8_4:+7858817 | Msa1311180:CDS |
GCGTGTTTCCCTTCAGTTGC+TGG | 0.318317 | 8_4:-7859550 | None:intergenic |
GGAACCCGTTTCTTCGATAA+TGG | 0.318986 | 8_4:-7859631 | None:intergenic |
CAACTGGACTTAGCAATGTT+AGG | 0.320784 | 8_4:+7862083 | Msa1311180:CDS |
CAGAGACAGTCAAATAAGTT+TGG | 0.322621 | 8_4:-7860655 | None:intergenic |
TTCTACTGAACCGGGTTCTT+GGG | 0.332682 | 8_4:-7858414 | None:intergenic |
AAGACTCGAGTGTTGAGAAT+TGG | 0.334511 | 8_4:-7858438 | None:intergenic |
GGAGGTAAAGTTCTAGGAAT+AGG | 0.339571 | 8_4:-7858758 | None:intergenic |
AGCGATCAGGGTTCACTCTA+AGG | 0.340817 | 8_4:+7862038 | Msa1311180:CDS |
CAAACTTATTTGACTGTCTC+TGG | 0.344220 | 8_4:+7860656 | Msa1311180:CDS |
TGAAAAGAAGCGAAAGCAAT+AGG | 0.348641 | 8_4:+7860495 | Msa1311180:CDS |
GGATAACTGTGAATTATAAC+TGG | 0.352936 | 8_4:-7861516 | None:intergenic |
TAGAATGGTTTAGCTTCTTT+CGG | 0.355064 | 8_4:-7861537 | None:intergenic |
GATTTGGGAGGTAAAGTTCT+AGG | 0.355145 | 8_4:-7858764 | None:intergenic |
AGATAAACGGTGGAAGATTT+GGG | 0.361531 | 8_4:-7858779 | None:intergenic |
TTACATCTTGCCATAAAGAT+TGG | 0.369130 | 8_4:-7862202 | None:intergenic |
GCCGTCAATGGCGGCGGAGG+TGG | 0.369307 | 8_4:-7858602 | None:intergenic |
CTTGGAAATGTGTATTCGTT+TGG | 0.371840 | 8_4:+7860710 | Msa1311180:CDS |
CAAGTCATTAGCACAGTTCA+TGG | 0.373907 | 8_4:-7861014 | None:intergenic |
AGAATTGGGTTCTACTGAAC+CGG | 0.376232 | 8_4:-7858423 | None:intergenic |
GCAGTCTGTGGTTGTTATAG+TGG | 0.378976 | 8_4:-7860324 | None:intergenic |
AGGATTAGGCAACATGTTCC+AGG | 0.380097 | 8_4:+7860349 | Msa1311180:CDS |
TAATGAACTGGCATCACAAT+TGG | 0.393100 | 8_4:+7860556 | Msa1311180:CDS |
TCCACCTCCGCCGCCATTGA+CGG | 0.393557 | 8_4:+7858601 | Msa1311180:CDS |
AGACTCGAGTGTTGAGAATT+GGG | 0.393908 | 8_4:-7858437 | None:intergenic |
GCTGACATTCAAGTTGTTCT+CGG | 0.399739 | 8_4:+7862161 | Msa1311180:three_prime_UTR |
TTCAACTAATATACAGGTTC+CGG | 0.402905 | 8_4:-7859512 | None:intergenic |
TGTCTCTGGTCGCTTACATC+TGG | 0.403823 | 8_4:+7860670 | Msa1311180:CDS |
CAGCTTCCTTCACAATTTCA+AGG | 0.406326 | 8_4:-7860442 | None:intergenic |
AAAGAGTGGTGGTGGGCGGA+TGG | 0.415250 | 8_4:+7858546 | Msa1311180:CDS |
GAGAGTTATGCATGTGCTCT+TGG | 0.418765 | 8_4:+7860692 | Msa1311180:CDS |
GCCAAAATATAATTAATTGT+TGG | 0.420885 | 8_4:-7862140 | None:intergenic |
AACATCTAAAGCTTCATTGT+AGG | 0.422900 | 8_4:-7861164 | None:intergenic |
AATGGAACGGTTAAGCGATC+AGG | 0.423765 | 8_4:+7862025 | Msa1311180:CDS |
GAAGACGATCAATGCAAGTA+TGG | 0.434014 | 8_4:-7861108 | None:intergenic |
TATGGCAGAATTACTGAGTT+GGG | 0.435795 | 8_4:+7861959 | Msa1311180:intron |
AGAGACAGTCAAATAAGTTT+GGG | 0.437294 | 8_4:-7860654 | None:intergenic |
ACTCCGAACCGCCGTCGGTT+CGG | 0.438956 | 8_4:-7858514 | None:intergenic |
AGAAGATTTCTCGACTTCCT+TGG | 0.440040 | 8_4:-7858579 | None:intergenic |
TTGTCATAGCTTCTTGGAAA+AGG | 0.441390 | 8_4:-7862115 | None:intergenic |
TCTGAAGAAAACTAATGAAC+TGG | 0.446328 | 8_4:+7860544 | Msa1311180:CDS |
AGCTTTAGATGTTCTTAGAA+AGG | 0.447084 | 8_4:+7861174 | Msa1311180:CDS |
TCATTAACTCGAACATAGAA+TGG | 0.451235 | 8_4:-7861552 | None:intergenic |
CTGACAAAGTTCTTCACATT+GGG | 0.455791 | 8_4:+7859587 | Msa1311180:CDS |
GACGGCGGTTCGGAGTTTAT+AGG | 0.459245 | 8_4:+7858521 | Msa1311180:CDS |
AGTTGTTCGAGGCCGAAAAT+GGG | 0.464152 | 8_4:-7859677 | None:intergenic |
AACTGGACTTAGCAATGTTA+GGG | 0.464228 | 8_4:+7862084 | Msa1311180:CDS |
CAGACCTTCAACTAATATAC+AGG | 0.464667 | 8_4:-7859518 | None:intergenic |
TCGGCCGTCAATGGCGGCGG+AGG | 0.467359 | 8_4:-7858605 | None:intergenic |
AGACCGAACCGACGGCGGTT+CGG | 0.470522 | 8_4:+7858511 | Msa1311180:CDS |
ATCGGTGATAAGTAGATAAA+CGG | 0.470668 | 8_4:-7858792 | None:intergenic |
GTGGATGGTTGAGGCTGAAA+TGG | 0.471045 | 8_4:+7860784 | Msa1311180:CDS |
ACCACAGACTGCGAAGGATT+AGG | 0.477904 | 8_4:+7860335 | Msa1311180:CDS |
AGTATCCATTATCGAAGAAA+CGG | 0.484436 | 8_4:+7859626 | Msa1311180:CDS |
TCGTCGGCCGTCAATGGCGG+CGG | 0.488913 | 8_4:-7858608 | None:intergenic |
ATTACGAATCAAAGGAATCC+TGG | 0.489549 | 8_4:-7858678 | None:intergenic |
GTGTGGAGATTCTTCAGTCC+AGG | 0.490135 | 8_4:+7858660 | Msa1311180:CDS |
AATTTCACCGTAGTTGTTCG+AGG | 0.491987 | 8_4:-7859688 | None:intergenic |
ATATCATCGTCGGCCGTCAA+TGG | 0.492793 | 8_4:-7858614 | None:intergenic |
CAGTCTGTGGTTGTTATAGT+GGG | 0.495335 | 8_4:-7860323 | None:intergenic |
ATTTGAACTAGAAAGAACTT+AGG | 0.496696 | 8_4:-7862329 | None:intergenic |
ATCGAAGAAACGGGTTCCAC+TGG | 0.499423 | 8_4:+7859636 | Msa1311180:CDS |
GAAAAGAAGCGAAAGCAATA+GGG | 0.499997 | 8_4:+7860496 | Msa1311180:CDS |
CATTGTAGGAAATTATTTCA+GGG | 0.505321 | 8_4:-7861150 | None:intergenic |
GTATCCATTATCGAAGAAAC+GGG | 0.505875 | 8_4:+7859627 | Msa1311180:CDS |
CGAAAGCAATAGGGAAGCGC+TGG | 0.509479 | 8_4:+7860505 | Msa1311180:CDS |
AAGAGTGGTGGTGGGCGGAT+GGG | 0.514530 | 8_4:+7858547 | Msa1311180:CDS |
TATAGGACAAAGAGTGGTGG+TGG | 0.516759 | 8_4:+7858538 | Msa1311180:CDS |
GTATGGCAGAATTACTGAGT+TGG | 0.524678 | 8_4:+7861958 | Msa1311180:intron |
GGAACCTGTATATTAGTTGA+AGG | 0.526607 | 8_4:+7859514 | Msa1311180:CDS |
TCCATTATATTACGAATCAA+AGG | 0.529018 | 8_4:-7858686 | None:intergenic |
ATTTGATCTTGTTGTCCCAA+AGG | 0.537738 | 8_4:+7861593 | Msa1311180:CDS |
ATAATATTCGGTTCAAAACA+TGG | 0.545800 | 8_4:+7858364 | Msa1311180:exon |
GTTCAAGTACCTCTGTGAGC+GGG | 0.546364 | 8_4:+7861036 | Msa1311180:CDS |
ACACATGACACGTCTTTCAC+CGG | 0.549787 | 8_4:-7858641 | None:intergenic |
CACCGGCGTTATATCATCGT+CGG | 0.553730 | 8_4:-7858624 | None:intergenic |
GAATTGGGTTCTACTGAACC+GGG | 0.555450 | 8_4:-7858422 | None:intergenic |
AATTTCTGGCAGCCAAAATG+AGG | 0.559288 | 8_4:+7861698 | Msa1311180:CDS |
CTAGAACGACCAGCAACTGA+AGG | 0.560158 | 8_4:+7859541 | Msa1311180:CDS |
AGGTTCCGGTAGGCAAAAGA+AGG | 0.561095 | 8_4:-7859498 | None:intergenic |
GATTCACTGTAGTTGTAACC+TGG | 0.561688 | 8_4:-7860367 | None:intergenic |
GCCTAATCCTTCGCAGTCTG+TGG | 0.565890 | 8_4:-7860336 | None:intergenic |
GACTCACTTCAGATCACCTA+AGG | 0.569954 | 8_4:+7861361 | Msa1311180:CDS |
AGTACAATTTATGAGAATGA+AGG | 0.570053 | 8_4:+7860413 | Msa1311180:CDS |
ATTGTAGGAAATTATTTCAG+GGG | 0.574362 | 8_4:-7861149 | None:intergenic |
GTTTATCTACTTATCACCGA+TGG | 0.574883 | 8_4:+7858794 | Msa1311180:CDS |
AGATCTTTGTCTAAATGGAA+CGG | 0.576506 | 8_4:+7862012 | Msa1311180:CDS |
CCGGTAGGCAAAAGAAGGCT+AGG | 0.577333 | 8_4:-7859493 | None:intergenic |
CTAAACATGTTGCAGAAATG+TGG | 0.578192 | 8_4:+7860765 | Msa1311180:CDS |
TCATCGTCGGCCGTCAATGG+CGG | 0.584257 | 8_4:-7858611 | None:intergenic |
AGTGAATCAGAAAGCTGTCA+AGG | 0.586394 | 8_4:+7860382 | Msa1311180:CDS |
ATGGAACGGTTAAGCGATCA+GGG | 0.587701 | 8_4:+7862026 | Msa1311180:CDS |
GTGTTGGAAGAGAATTGAAG+AGG | 0.588315 | 8_4:-7858272 | None:intergenic |
TGTTAGCCTTGAAATTGTGA+AGG | 0.588593 | 8_4:+7860436 | Msa1311180:CDS |
TGCAGAAATGTGGATGGTTG+AGG | 0.588946 | 8_4:+7860775 | Msa1311180:CDS |
TGTTCAAGTACCTCTGTGAG+CGG | 0.591636 | 8_4:+7861035 | Msa1311180:CDS |
TGCCGCGAGAGAAGTATGAA+TGG | 0.591892 | 8_4:+7861984 | Msa1311180:CDS |
GCTGACAAAGTTCTTCACAT+TGG | 0.591894 | 8_4:+7859586 | Msa1311180:CDS |
TATAAACTCCGAACCGCCGT+CGG | 0.592176 | 8_4:-7858519 | None:intergenic |
TCTTGCCATAAAGATTGGAA+TGG | 0.603493 | 8_4:-7862197 | None:intergenic |
AAAATGCAAACCCAAGAACC+CGG | 0.606260 | 8_4:+7858404 | Msa1311180:CDS |
CACATTGGGACAGTAGACAT+TGG | 0.609792 | 8_4:+7859601 | Msa1311180:CDS |
AAATCTCTTAATGCATCCAG+TGG | 0.611833 | 8_4:-7859652 | None:intergenic |
ACTAGAAAGAACTTAGGATG+AGG | 0.612358 | 8_4:-7862323 | None:intergenic |
CTGGCAGCCAAAATGAGGAG+CGG | 0.630568 | 8_4:+7861703 | Msa1311180:CDS |
CGTGGCAACAGATGAACCAT+CGG | 0.631853 | 8_4:-7858810 | None:intergenic |
TACCATTCATACTTCTCTCG+CGG | 0.633539 | 8_4:-7861986 | None:intergenic |
CGGATGGGTGAAGTCATCCA+AGG | 0.633680 | 8_4:+7858562 | Msa1311180:CDS |
GGAGTTTATAGGACAAAGAG+TGG | 0.634196 | 8_4:+7858532 | Msa1311180:CDS |
GGACAAAGAGTGGTGGTGGG+CGG | 0.641046 | 8_4:+7858542 | Msa1311180:CDS |
ATAACAACCACAGACTGCGA+AGG | 0.649224 | 8_4:+7860329 | Msa1311180:CDS |
TTTCTAGACCGAACCGACGG+CGG | 0.653294 | 8_4:+7858506 | Msa1311180:CDS |
TAGAACGACCAGCAACTGAA+GGG | 0.655092 | 8_4:+7859542 | Msa1311180:CDS |
GGCCGACGATGATATAACGC+CGG | 0.660439 | 8_4:+7858622 | Msa1311180:CDS |
ACATGTTGCAGAAATGTGGA+TGG | 0.663378 | 8_4:+7860769 | Msa1311180:CDS |
ATAGGACAAAGAGTGGTGGT+GGG | 0.664940 | 8_4:+7858539 | Msa1311180:CDS |
GGTGAAAGACGTGTCATGTG+TGG | 0.666056 | 8_4:+7858643 | Msa1311180:CDS |
GGCTTACTGTGATAAACTCG+AGG | 0.673018 | 8_4:+7861724 | Msa1311180:CDS |
GGTGATAAGTAGATAAACGG+TGG | 0.674884 | 8_4:-7858789 | None:intergenic |
GACATTCAAGTTGTTCTCGG+AGG | 0.683600 | 8_4:+7862164 | Msa1311180:three_prime_UTR |
ACTAATATACAGGTTCCGGT+AGG | 0.684364 | 8_4:-7859508 | None:intergenic |
GTTTATAGGACAAAGAGTGG+TGG | 0.701939 | 8_4:+7858535 | Msa1311180:CDS |
TAAACGGTGGAAGATTTGGG+AGG | 0.703695 | 8_4:-7858776 | None:intergenic |
GAAAACACGAACCTGAAGCG+TGG | 0.704478 | 8_4:-7858828 | None:intergenic |
TTTCCAAAACCCGCTCACAG+AGG | 0.751415 | 8_4:-7861045 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATATAAAATTACTTGA+TGG | - | chr8_4:7859160-7859179 | None:intergenic | 10.0% |
!! | GATTTATATAAACAAATAAT+TGG | + | chr8_4:7861807-7861826 | Msa1311180:intron | 10.0% |
!! | TAAAATATAAAATTACTTGA+TGG | - | chr8_4:7859160-7859179 | None:intergenic | 10.0% |
!! | GATTTATATAAACAAATAAT+TGG | + | chr8_4:7861807-7861826 | Msa1311180:intron | 10.0% |
!!! | TCACTTTTACTTATAATATT+CGG | + | chr8_4:7858352-7858371 | Msa1311180:five_prime_UTR | 15.0% |
!! | CTAATTATTTAAGAATGTTT+GGG | - | chr8_4:7859129-7859148 | None:intergenic | 15.0% |
!! | ACTAATTATTTAAGAATGTT+TGG | - | chr8_4:7859130-7859149 | None:intergenic | 15.0% |
!! | TTCTTAAATAATTAGTAACT+TGG | + | chr8_4:7859134-7859153 | Msa1311180:intron | 15.0% |
!! | TGTCATACTTTAATATATAT+TGG | - | chr8_4:7859361-7859380 | None:intergenic | 15.0% |
!!! | AATGTAATATGATATTTTGT+AGG | + | chr8_4:7859444-7859463 | Msa1311180:intron | 15.0% |
!! | ATGGCTATAAATAAAAATAT+GGG | - | chr8_4:7859864-7859883 | None:intergenic | 15.0% |
!! | AATGGCTATAAATAAAAATA+TGG | - | chr8_4:7859865-7859884 | None:intergenic | 15.0% |
!! | TAAAAAATGATTCTGAATAT+CGG | + | chr8_4:7859933-7859952 | Msa1311180:intron | 15.0% |
!! | ATATTTATATATGAAGAACA+AGG | - | chr8_4:7859990-7860009 | None:intergenic | 15.0% |
!! | AATATGATAGGAAAATAAAT+AGG | - | chr8_4:7860078-7860097 | None:intergenic | 15.0% |
!! | ATATTATTGAGAAATATGAT+AGG | - | chr8_4:7860090-7860109 | None:intergenic | 15.0% |
!! | TATCATATTTCTCAATAATA+TGG | + | chr8_4:7860089-7860108 | Msa1311180:intron | 15.0% |
!! | ATAAAAATAATAACATAGCA+AGG | - | chr8_4:7860190-7860209 | None:intergenic | 15.0% |
!! | ATAACAATAAGTAATAAAAG+TGG | - | chr8_4:7861452-7861471 | None:intergenic | 15.0% |
!! | ATTTGTTTATATAAATCAGA+GGG | - | chr8_4:7861804-7861823 | None:intergenic | 15.0% |
!! | TATTTGTTTATATAAATCAG+AGG | - | chr8_4:7861805-7861824 | None:intergenic | 15.0% |
!!! | TCACTTTTACTTATAATATT+CGG | + | chr8_4:7858352-7858371 | Msa1311180:five_prime_UTR | 15.0% |
!! | CTAATTATTTAAGAATGTTT+GGG | - | chr8_4:7859129-7859148 | None:intergenic | 15.0% |
!! | ACTAATTATTTAAGAATGTT+TGG | - | chr8_4:7859130-7859149 | None:intergenic | 15.0% |
!! | TTCTTAAATAATTAGTAACT+TGG | + | chr8_4:7859134-7859153 | Msa1311180:intron | 15.0% |
!! | TGTCATACTTTAATATATAT+TGG | - | chr8_4:7859361-7859380 | None:intergenic | 15.0% |
!!! | AATGTAATATGATATTTTGT+AGG | + | chr8_4:7859444-7859463 | Msa1311180:intron | 15.0% |
!! | ATGGCTATAAATAAAAATAT+GGG | - | chr8_4:7859864-7859883 | None:intergenic | 15.0% |
!! | AATGGCTATAAATAAAAATA+TGG | - | chr8_4:7859865-7859884 | None:intergenic | 15.0% |
!! | TAAAAAATGATTCTGAATAT+CGG | + | chr8_4:7859933-7859952 | Msa1311180:intron | 15.0% |
!! | ATATTTATATATGAAGAACA+AGG | - | chr8_4:7859990-7860009 | None:intergenic | 15.0% |
!! | AATATGATAGGAAAATAAAT+AGG | - | chr8_4:7860078-7860097 | None:intergenic | 15.0% |
!! | ATATTATTGAGAAATATGAT+AGG | - | chr8_4:7860090-7860109 | None:intergenic | 15.0% |
!! | TATCATATTTCTCAATAATA+TGG | + | chr8_4:7860089-7860108 | Msa1311180:intron | 15.0% |
!! | ATAAAAATAATAACATAGCA+AGG | - | chr8_4:7860190-7860209 | None:intergenic | 15.0% |
!! | ATAACAATAAGTAATAAAAG+TGG | - | chr8_4:7861452-7861471 | None:intergenic | 15.0% |
!! | ATTTGTTTATATAAATCAGA+GGG | - | chr8_4:7861804-7861823 | None:intergenic | 15.0% |
!! | TATTTGTTTATATAAATCAG+AGG | - | chr8_4:7861805-7861824 | None:intergenic | 15.0% |
!! | GAAAACAACTTATAACTTAT+AGG | - | chr8_4:7858884-7858903 | None:intergenic | 20.0% |
!!! | TTGTTTTCAAAATCTATTCT+GGG | + | chr8_4:7858896-7858915 | Msa1311180:intron | 20.0% |
!! | ACAAAGTTAATAATCATTAC+AGG | - | chr8_4:7859261-7859280 | None:intergenic | 20.0% |
!! | TGGCTATAAATAAAAATATG+GGG | - | chr8_4:7859863-7859882 | None:intergenic | 20.0% |
!!! | TATTTTTATTAAGTGATGCT+TGG | + | chr8_4:7860201-7860220 | Msa1311180:intron | 20.0% |
!! | ATATTTCTTATAATCGTTTC+AGG | + | chr8_4:7861665-7861684 | Msa1311180:intron | 20.0% |
!! | AGAAGAAAATAATGAACTAA+GGG | - | chr8_4:7861767-7861786 | None:intergenic | 20.0% |
!! | AAGAAGAAAATAATGAACTA+AGG | - | chr8_4:7861768-7861787 | None:intergenic | 20.0% |
!!! | GATTTATTGATATTTTACCA+AGG | - | chr8_4:7861920-7861939 | None:intergenic | 20.0% |
!!! | GCCAACAATTAATTATATTT+TGG | + | chr8_4:7862139-7862158 | Msa1311180:exon | 20.0% |
!! | GCCAAAATATAATTAATTGT+TGG | - | chr8_4:7862143-7862162 | None:intergenic | 20.0% |
!! | ACAATGTATAACTGTATATA+AGG | + | chr8_4:7862271-7862290 | Msa1311180:three_prime_UTR | 20.0% |
!! | GAAAACAACTTATAACTTAT+AGG | - | chr8_4:7858884-7858903 | None:intergenic | 20.0% |
!!! | TTGTTTTCAAAATCTATTCT+GGG | + | chr8_4:7858896-7858915 | Msa1311180:intron | 20.0% |
!! | ACAAAGTTAATAATCATTAC+AGG | - | chr8_4:7859261-7859280 | None:intergenic | 20.0% |
!! | TGGCTATAAATAAAAATATG+GGG | - | chr8_4:7859863-7859882 | None:intergenic | 20.0% |
!!! | TATTTTTATTAAGTGATGCT+TGG | + | chr8_4:7860201-7860220 | Msa1311180:intron | 20.0% |
!! | ATATTTCTTATAATCGTTTC+AGG | + | chr8_4:7861665-7861684 | Msa1311180:intron | 20.0% |
!! | AGAAGAAAATAATGAACTAA+GGG | - | chr8_4:7861767-7861786 | None:intergenic | 20.0% |
!! | AAGAAGAAAATAATGAACTA+AGG | - | chr8_4:7861768-7861787 | None:intergenic | 20.0% |
!!! | GATTTATTGATATTTTACCA+AGG | - | chr8_4:7861920-7861939 | None:intergenic | 20.0% |
!!! | GCCAACAATTAATTATATTT+TGG | + | chr8_4:7862139-7862158 | Msa1311180:exon | 20.0% |
!! | GCCAAAATATAATTAATTGT+TGG | - | chr8_4:7862143-7862162 | None:intergenic | 20.0% |
!! | ACAATGTATAACTGTATATA+AGG | + | chr8_4:7862271-7862290 | Msa1311180:three_prime_UTR | 20.0% |
! | ATAATATTCGGTTCAAAACA+TGG | + | chr8_4:7858364-7858383 | Msa1311180:exon | 25.0% |
!!! | AAAGTGTTTTTAATTGAACC+CGG | - | chr8_4:7858487-7858506 | None:intergenic | 25.0% |
!! | TCCTTTGATTCGTAATATAA+TGG | + | chr8_4:7858685-7858704 | Msa1311180:CDS | 25.0% |
! | TCCATTATATTACGAATCAA+AGG | - | chr8_4:7858689-7858708 | None:intergenic | 25.0% |
!!! | CGTAATATAATGGAAGTTTT+AGG | + | chr8_4:7858695-7858714 | Msa1311180:CDS | 25.0% |
!!! | AATATAATGGAAGTTTTAGG+TGG | + | chr8_4:7858698-7858717 | Msa1311180:CDS | 25.0% |
!!! | GTTGTTTTCAAAATCTATTC+TGG | + | chr8_4:7858895-7858914 | Msa1311180:intron | 25.0% |
!! | TGTTTTCAAAATCTATTCTG+GGG | + | chr8_4:7858897-7858916 | Msa1311180:intron | 25.0% |
! | AAGCTTGTCAAAATAACTTA+TGG | - | chr8_4:7859046-7859065 | None:intergenic | 25.0% |
!!! | AAGTTATTTTGACAAGCTTA+TGG | + | chr8_4:7859047-7859066 | Msa1311180:intron | 25.0% |
! | AATTGTTTATTGTCATGTCA+TGG | + | chr8_4:7859085-7859104 | Msa1311180:intron | 25.0% |
! | ATTGTTTATTGTCATGTCAT+GGG | + | chr8_4:7859086-7859105 | Msa1311180:intron | 25.0% |
!! | ATATGATATTTTGTAGGTTG+TGG | + | chr8_4:7859450-7859469 | Msa1311180:intron | 25.0% |
!! | TAAGAGATTTTTCCCATTTT+CGG | + | chr8_4:7859665-7859684 | Msa1311180:CDS | 25.0% |
! | ATAATAAGATATAGCGAATG+AGG | - | chr8_4:7859733-7859752 | None:intergenic | 25.0% |
! | TAAATAAAAATATGGGGGTA+AGG | - | chr8_4:7859857-7859876 | None:intergenic | 25.0% |
! | GGCTATAAATAAAAATATGG+GGG | - | chr8_4:7859862-7859881 | None:intergenic | 25.0% |
! | TTCTGAATATCGGTAAAATT+TGG | + | chr8_4:7859943-7859962 | Msa1311180:intron | 25.0% |
!!! | CTTGTCATTTATTTTTTGAC+AGG | + | chr8_4:7860135-7860154 | Msa1311180:intron | 25.0% |
! | AGTACAATTTATGAGAATGA+AGG | + | chr8_4:7860413-7860432 | Msa1311180:CDS | 25.0% |
! | AGTGAGAGAAAAGAAAAAAT+TGG | + | chr8_4:7860580-7860599 | Msa1311180:CDS | 25.0% |
! | GTGAGAGAAAAGAAAAAATT+GGG | + | chr8_4:7860581-7860600 | Msa1311180:CDS | 25.0% |
! | AAAATTGGGAACTTCATTAA+AGG | + | chr8_4:7860595-7860614 | Msa1311180:CDS | 25.0% |
! | GACAAATTCTTTCTTCTATT+CGG | + | chr8_4:7860929-7860948 | Msa1311180:intron | 25.0% |
! | ATGTACATTGTTATACTTAC+AGG | + | chr8_4:7860988-7861007 | Msa1311180:intron | 25.0% |
! | ATTGTAGGAAATTATTTCAG+GGG | - | chr8_4:7861152-7861171 | None:intergenic | 25.0% |
! | CATTGTAGGAAATTATTTCA+GGG | - | chr8_4:7861153-7861172 | None:intergenic | 25.0% |
! | TCATTGTAGGAAATTATTTC+AGG | - | chr8_4:7861154-7861173 | None:intergenic | 25.0% |
! | ATATTTATCACCAAATGTTG+TGG | + | chr8_4:7861202-7861221 | Msa1311180:intron | 25.0% |
!! | TTTGAGATGAAAAGTAAATG+AGG | - | chr8_4:7861253-7861272 | None:intergenic | 25.0% |
! | TATTTGTTTGTTCATGTTAC+TGG | + | chr8_4:7861283-7861302 | Msa1311180:intron | 25.0% |
!!! | TATAACTGGTTTTTTGTAGA+TGG | - | chr8_4:7861505-7861524 | None:intergenic | 25.0% |
!!! | AATCATGTGTTTGCTTTTAA+AGG | - | chr8_4:7861837-7861856 | None:intergenic | 25.0% |
!!! | GATTTTGTTTATGTACTGTA+TGG | + | chr8_4:7861941-7861960 | Msa1311180:intron | 25.0% |
! | TACTTAGATCTTTGTCTAAA+TGG | + | chr8_4:7862007-7862026 | Msa1311180:CDS | 25.0% |
! | ATAATATTCGGTTCAAAACA+TGG | + | chr8_4:7858364-7858383 | Msa1311180:exon | 25.0% |
!!! | AAAGTGTTTTTAATTGAACC+CGG | - | chr8_4:7858487-7858506 | None:intergenic | 25.0% |
!! | TCCTTTGATTCGTAATATAA+TGG | + | chr8_4:7858685-7858704 | Msa1311180:CDS | 25.0% |
! | TCCATTATATTACGAATCAA+AGG | - | chr8_4:7858689-7858708 | None:intergenic | 25.0% |
!!! | CGTAATATAATGGAAGTTTT+AGG | + | chr8_4:7858695-7858714 | Msa1311180:CDS | 25.0% |
!!! | AATATAATGGAAGTTTTAGG+TGG | + | chr8_4:7858698-7858717 | Msa1311180:CDS | 25.0% |
!!! | GTTGTTTTCAAAATCTATTC+TGG | + | chr8_4:7858895-7858914 | Msa1311180:intron | 25.0% |
!! | TGTTTTCAAAATCTATTCTG+GGG | + | chr8_4:7858897-7858916 | Msa1311180:intron | 25.0% |
! | AAGCTTGTCAAAATAACTTA+TGG | - | chr8_4:7859046-7859065 | None:intergenic | 25.0% |
!!! | AAGTTATTTTGACAAGCTTA+TGG | + | chr8_4:7859047-7859066 | Msa1311180:intron | 25.0% |
! | AATTGTTTATTGTCATGTCA+TGG | + | chr8_4:7859085-7859104 | Msa1311180:intron | 25.0% |
! | ATTGTTTATTGTCATGTCAT+GGG | + | chr8_4:7859086-7859105 | Msa1311180:intron | 25.0% |
!! | ATATGATATTTTGTAGGTTG+TGG | + | chr8_4:7859450-7859469 | Msa1311180:intron | 25.0% |
!! | TAAGAGATTTTTCCCATTTT+CGG | + | chr8_4:7859665-7859684 | Msa1311180:CDS | 25.0% |
! | ATAATAAGATATAGCGAATG+AGG | - | chr8_4:7859733-7859752 | None:intergenic | 25.0% |
! | TAAATAAAAATATGGGGGTA+AGG | - | chr8_4:7859857-7859876 | None:intergenic | 25.0% |
! | GGCTATAAATAAAAATATGG+GGG | - | chr8_4:7859862-7859881 | None:intergenic | 25.0% |
! | TTCTGAATATCGGTAAAATT+TGG | + | chr8_4:7859943-7859962 | Msa1311180:intron | 25.0% |
!!! | CTTGTCATTTATTTTTTGAC+AGG | + | chr8_4:7860135-7860154 | Msa1311180:intron | 25.0% |
! | AGTACAATTTATGAGAATGA+AGG | + | chr8_4:7860413-7860432 | Msa1311180:CDS | 25.0% |
! | AGTGAGAGAAAAGAAAAAAT+TGG | + | chr8_4:7860580-7860599 | Msa1311180:CDS | 25.0% |
! | GTGAGAGAAAAGAAAAAATT+GGG | + | chr8_4:7860581-7860600 | Msa1311180:CDS | 25.0% |
! | AAAATTGGGAACTTCATTAA+AGG | + | chr8_4:7860595-7860614 | Msa1311180:CDS | 25.0% |
! | GACAAATTCTTTCTTCTATT+CGG | + | chr8_4:7860929-7860948 | Msa1311180:intron | 25.0% |
! | ATGTACATTGTTATACTTAC+AGG | + | chr8_4:7860988-7861007 | Msa1311180:intron | 25.0% |
! | ATTGTAGGAAATTATTTCAG+GGG | - | chr8_4:7861152-7861171 | None:intergenic | 25.0% |
! | CATTGTAGGAAATTATTTCA+GGG | - | chr8_4:7861153-7861172 | None:intergenic | 25.0% |
! | TCATTGTAGGAAATTATTTC+AGG | - | chr8_4:7861154-7861173 | None:intergenic | 25.0% |
! | ATATTTATCACCAAATGTTG+TGG | + | chr8_4:7861202-7861221 | Msa1311180:intron | 25.0% |
!! | TTTGAGATGAAAAGTAAATG+AGG | - | chr8_4:7861253-7861272 | None:intergenic | 25.0% |
! | TATTTGTTTGTTCATGTTAC+TGG | + | chr8_4:7861283-7861302 | Msa1311180:intron | 25.0% |
!!! | TATAACTGGTTTTTTGTAGA+TGG | - | chr8_4:7861505-7861524 | None:intergenic | 25.0% |
!!! | AATCATGTGTTTGCTTTTAA+AGG | - | chr8_4:7861837-7861856 | None:intergenic | 25.0% |
!!! | GATTTTGTTTATGTACTGTA+TGG | + | chr8_4:7861941-7861960 | Msa1311180:intron | 25.0% |
! | TACTTAGATCTTTGTCTAAA+TGG | + | chr8_4:7862007-7862026 | Msa1311180:CDS | 25.0% |
!!! | GTTTGTGTTTGTTTTTGTGT+TGG | - | chr8_4:7858291-7858310 | None:intergenic | 30.0% |
! | CTCCTTTTAAATACTCAAAC+CGG | + | chr8_4:7858465-7858484 | Msa1311180:CDS | 30.0% |
! | TCCTTTTAAATACTCAAACC+GGG | + | chr8_4:7858466-7858485 | Msa1311180:CDS | 30.0% |
ATCGGTGATAAGTAGATAAA+CGG | - | chr8_4:7858795-7858814 | None:intergenic | 30.0% | |
ATAAACATTTGCAAGACTGT+TGG | - | chr8_4:7858985-7859004 | None:intergenic | 30.0% | |
TCAAATAAGTCAATCCAGAT+AGG | + | chr8_4:7859019-7859038 | Msa1311180:intron | 30.0% | |
AAATAACTTATGGACCTATC+TGG | - | chr8_4:7859036-7859055 | None:intergenic | 30.0% | |
TTCAACTAATATACAGGTTC+CGG | - | chr8_4:7859515-7859534 | None:intergenic | 30.0% | |
AGTATCCATTATCGAAGAAA+CGG | + | chr8_4:7859626-7859645 | Msa1311180:CDS | 30.0% | |
! | ATTACTGCTTTAACTTCTAG+AGG | + | chr8_4:7860036-7860055 | Msa1311180:intron | 30.0% |
ATAAATGACAAGCATGCTAT+TGG | - | chr8_4:7860127-7860146 | None:intergenic | 30.0% | |
ATGTTCCTTGAAAAATGAGT+GGG | - | chr8_4:7860282-7860301 | None:intergenic | 30.0% | |
!!! | AACTAGTTTGCTTTTCTCTT+TGG | - | chr8_4:7860468-7860487 | None:intergenic | 30.0% |
TCTGAAGAAAACTAATGAAC+TGG | + | chr8_4:7860544-7860563 | Msa1311180:CDS | 30.0% | |
TTGGGAAGAGAAAAAATCTT+CGG | - | chr8_4:7860639-7860658 | None:intergenic | 30.0% | |
AGAGACAGTCAAATAAGTTT+GGG | - | chr8_4:7860657-7860676 | None:intergenic | 30.0% | |
! | AATGGCTTTTGCTGAATTAA+AGG | + | chr8_4:7860802-7860821 | Msa1311180:CDS | 30.0% |
AAGTCTTGACTAAATAGAGA+TGG | - | chr8_4:7860887-7860906 | None:intergenic | 30.0% | |
ATTCTTTCTTCTATTCGGTT+TGG | + | chr8_4:7860934-7860953 | Msa1311180:intron | 30.0% | |
TTCTTTCTTCTATTCGGTTT+GGG | + | chr8_4:7860935-7860954 | Msa1311180:intron | 30.0% | |
! | AACATCTAAAGCTTCATTGT+AGG | - | chr8_4:7861167-7861186 | None:intergenic | 30.0% |
!! | AGCTTTAGATGTTCTTAGAA+AGG | + | chr8_4:7861174-7861193 | Msa1311180:CDS | 30.0% |
! | TCTGAAACAAAGTTTGATTC+AGG | + | chr8_4:7861333-7861352 | Msa1311180:CDS | 30.0% |
ATAAGTAATAAAAGTGGCGA+AGG | - | chr8_4:7861446-7861465 | None:intergenic | 30.0% | |
GGATAACTGTGAATTATAAC+TGG | - | chr8_4:7861519-7861538 | None:intergenic | 30.0% | |
! | TAGAATGGTTTAGCTTCTTT+CGG | - | chr8_4:7861540-7861559 | None:intergenic | 30.0% |
TCATTAACTCGAACATAGAA+TGG | - | chr8_4:7861555-7861574 | None:intergenic | 30.0% | |
TCTTACACATAGTACTACAA+TGG | - | chr8_4:7861637-7861656 | None:intergenic | 30.0% | |
! | TTCTTATAATCGTTTCAGGT+TGG | + | chr8_4:7861669-7861688 | Msa1311180:intron | 30.0% |
AACAGGCATATTTAACAGTT+CGG | - | chr8_4:7861896-7861915 | None:intergenic | 30.0% | |
! | TGATATTTTACCAAGGAAAC+AGG | - | chr8_4:7861913-7861932 | None:intergenic | 30.0% |
AGATCTTTGTCTAAATGGAA+CGG | + | chr8_4:7862012-7862031 | Msa1311180:CDS | 30.0% | |
TATTGCCATTCCAATCTTTA+TGG | + | chr8_4:7862192-7862211 | Msa1311180:three_prime_UTR | 30.0% | |
TTACATCTTGCCATAAAGAT+TGG | - | chr8_4:7862205-7862224 | None:intergenic | 30.0% | |
!!! | GTTTGTGTTTGTTTTTGTGT+TGG | - | chr8_4:7858291-7858310 | None:intergenic | 30.0% |
! | CTCCTTTTAAATACTCAAAC+CGG | + | chr8_4:7858465-7858484 | Msa1311180:CDS | 30.0% |
! | TCCTTTTAAATACTCAAACC+GGG | + | chr8_4:7858466-7858485 | Msa1311180:CDS | 30.0% |
ATCGGTGATAAGTAGATAAA+CGG | - | chr8_4:7858795-7858814 | None:intergenic | 30.0% | |
ATAAACATTTGCAAGACTGT+TGG | - | chr8_4:7858985-7859004 | None:intergenic | 30.0% | |
TCAAATAAGTCAATCCAGAT+AGG | + | chr8_4:7859019-7859038 | Msa1311180:intron | 30.0% | |
AAATAACTTATGGACCTATC+TGG | - | chr8_4:7859036-7859055 | None:intergenic | 30.0% | |
TTCAACTAATATACAGGTTC+CGG | - | chr8_4:7859515-7859534 | None:intergenic | 30.0% | |
AGTATCCATTATCGAAGAAA+CGG | + | chr8_4:7859626-7859645 | Msa1311180:CDS | 30.0% | |
! | ATTACTGCTTTAACTTCTAG+AGG | + | chr8_4:7860036-7860055 | Msa1311180:intron | 30.0% |
ATAAATGACAAGCATGCTAT+TGG | - | chr8_4:7860127-7860146 | None:intergenic | 30.0% | |
ATGTTCCTTGAAAAATGAGT+GGG | - | chr8_4:7860282-7860301 | None:intergenic | 30.0% | |
!!! | AACTAGTTTGCTTTTCTCTT+TGG | - | chr8_4:7860468-7860487 | None:intergenic | 30.0% |
TCTGAAGAAAACTAATGAAC+TGG | + | chr8_4:7860544-7860563 | Msa1311180:CDS | 30.0% | |
TTGGGAAGAGAAAAAATCTT+CGG | - | chr8_4:7860639-7860658 | None:intergenic | 30.0% | |
AGAGACAGTCAAATAAGTTT+GGG | - | chr8_4:7860657-7860676 | None:intergenic | 30.0% | |
! | AATGGCTTTTGCTGAATTAA+AGG | + | chr8_4:7860802-7860821 | Msa1311180:CDS | 30.0% |
AAGTCTTGACTAAATAGAGA+TGG | - | chr8_4:7860887-7860906 | None:intergenic | 30.0% | |
ATTCTTTCTTCTATTCGGTT+TGG | + | chr8_4:7860934-7860953 | Msa1311180:intron | 30.0% | |
TTCTTTCTTCTATTCGGTTT+GGG | + | chr8_4:7860935-7860954 | Msa1311180:intron | 30.0% | |
! | AACATCTAAAGCTTCATTGT+AGG | - | chr8_4:7861167-7861186 | None:intergenic | 30.0% |
!! | AGCTTTAGATGTTCTTAGAA+AGG | + | chr8_4:7861174-7861193 | Msa1311180:CDS | 30.0% |
! | TCTGAAACAAAGTTTGATTC+AGG | + | chr8_4:7861333-7861352 | Msa1311180:CDS | 30.0% |
ATAAGTAATAAAAGTGGCGA+AGG | - | chr8_4:7861446-7861465 | None:intergenic | 30.0% | |
GGATAACTGTGAATTATAAC+TGG | - | chr8_4:7861519-7861538 | None:intergenic | 30.0% | |
! | TAGAATGGTTTAGCTTCTTT+CGG | - | chr8_4:7861540-7861559 | None:intergenic | 30.0% |
TCATTAACTCGAACATAGAA+TGG | - | chr8_4:7861555-7861574 | None:intergenic | 30.0% | |
TCTTACACATAGTACTACAA+TGG | - | chr8_4:7861637-7861656 | None:intergenic | 30.0% | |
! | TTCTTATAATCGTTTCAGGT+TGG | + | chr8_4:7861669-7861688 | Msa1311180:intron | 30.0% |
AACAGGCATATTTAACAGTT+CGG | - | chr8_4:7861896-7861915 | None:intergenic | 30.0% | |
! | TGATATTTTACCAAGGAAAC+AGG | - | chr8_4:7861913-7861932 | None:intergenic | 30.0% |
AGATCTTTGTCTAAATGGAA+CGG | + | chr8_4:7862012-7862031 | Msa1311180:CDS | 30.0% | |
TATTGCCATTCCAATCTTTA+TGG | + | chr8_4:7862192-7862211 | Msa1311180:three_prime_UTR | 30.0% | |
TTACATCTTGCCATAAAGAT+TGG | - | chr8_4:7862205-7862224 | None:intergenic | 30.0% | |
! | ACCCGGTTTGAGTATTTAAA+AGG | - | chr8_4:7858470-7858489 | None:intergenic | 35.0% |
ATTACGAATCAAAGGAATCC+TGG | - | chr8_4:7858681-7858700 | None:intergenic | 35.0% | |
AGATAAACGGTGGAAGATTT+GGG | - | chr8_4:7858782-7858801 | None:intergenic | 35.0% | |
TAGATAAACGGTGGAAGATT+TGG | - | chr8_4:7858783-7858802 | None:intergenic | 35.0% | |
GTTTATCTACTTATCACCGA+TGG | + | chr8_4:7858794-7858813 | Msa1311180:CDS | 35.0% | |
! | TGATATTTTGTAGGTTGTGG+TGG | + | chr8_4:7859453-7859472 | Msa1311180:intron | 35.0% |
GGAACCTGTATATTAGTTGA+AGG | + | chr8_4:7859514-7859533 | Msa1311180:CDS | 35.0% | |
CAGACCTTCAACTAATATAC+AGG | - | chr8_4:7859521-7859540 | None:intergenic | 35.0% | |
GAAACACGCTATTCAGTTAA+AGG | + | chr8_4:7859564-7859583 | Msa1311180:CDS | 35.0% | |
CTGACAAAGTTCTTCACATT+GGG | + | chr8_4:7859587-7859606 | Msa1311180:CDS | 35.0% | |
GTATCCATTATCGAAGAAAC+GGG | + | chr8_4:7859627-7859646 | Msa1311180:CDS | 35.0% | |
AAATCTCTTAATGCATCCAG+TGG | - | chr8_4:7859655-7859674 | None:intergenic | 35.0% | |
!! | TGTAAACCATGAAAGCATTC+AGG | - | chr8_4:7859774-7859793 | None:intergenic | 35.0% |
AGAACAGAAACATGAAAACG+TGG | - | chr8_4:7859821-7859840 | None:intergenic | 35.0% | |
! | TGCTTTAACTTCTAGAGGAA+GGG | + | chr8_4:7860041-7860060 | Msa1311180:intron | 35.0% |
TGATGCTTGGCTCATATATT+AGG | + | chr8_4:7860214-7860233 | Msa1311180:intron | 35.0% | |
CATGTTCCTTGAAAAATGAG+TGG | - | chr8_4:7860283-7860302 | None:intergenic | 35.0% | |
!! | TGTTAGCCTTGAAATTGTGA+AGG | + | chr8_4:7860436-7860455 | Msa1311180:CDS | 35.0% |
TGAAAAGAAGCGAAAGCAAT+AGG | + | chr8_4:7860495-7860514 | Msa1311180:CDS | 35.0% | |
GAAAAGAAGCGAAAGCAATA+GGG | + | chr8_4:7860496-7860515 | Msa1311180:CDS | 35.0% | |
TAATGAACTGGCATCACAAT+TGG | + | chr8_4:7860556-7860575 | Msa1311180:CDS | 35.0% | |
CAGAGACAGTCAAATAAGTT+TGG | - | chr8_4:7860658-7860677 | None:intergenic | 35.0% | |
CAAACTTATTTGACTGTCTC+TGG | + | chr8_4:7860656-7860675 | Msa1311180:CDS | 35.0% | |
CTTGGAAATGTGTATTCGTT+TGG | + | chr8_4:7860710-7860729 | Msa1311180:CDS | 35.0% | |
! | GTTTTATCTGCGTGAAATCT+AGG | - | chr8_4:7860737-7860756 | None:intergenic | 35.0% |
CTAAACATGTTGCAGAAATG+TGG | + | chr8_4:7860765-7860784 | Msa1311180:CDS | 35.0% | |
! | GCAAGTATGGTCAATTCTTT+TGG | - | chr8_4:7861098-7861117 | None:intergenic | 35.0% |
CGGATATATTCCACAACATT+TGG | - | chr8_4:7861215-7861234 | None:intergenic | 35.0% | |
TGAGGTGGCAAAAATCAAAA+CGG | - | chr8_4:7861235-7861254 | None:intergenic | 35.0% | |
GAGATGAAAAGTAAATGAGG+TGG | - | chr8_4:7861250-7861269 | None:intergenic | 35.0% | |
TTTCTTATCTTCAGCCTATG+AGG | - | chr8_4:7861313-7861332 | None:intergenic | 35.0% | |
GGATAATATCGACATACCTT+AGG | - | chr8_4:7861380-7861399 | None:intergenic | 35.0% | |
TCGATATTATCCTCATGTTC+TGG | + | chr8_4:7861388-7861407 | Msa1311180:intron | 35.0% | |
ATCAACAAATCCAGAACATG+AGG | - | chr8_4:7861401-7861420 | None:intergenic | 35.0% | |
! | ATTTGATCTTGTTGTCCCAA+AGG | + | chr8_4:7861593-7861612 | Msa1311180:CDS | 35.0% |
! | CAGGTTGGAACTATAATTTC+TGG | + | chr8_4:7861684-7861703 | Msa1311180:intron | 35.0% |
GTTAAATATGCCTGTTTCCT+TGG | + | chr8_4:7861900-7861919 | Msa1311180:intron | 35.0% | |
TATGGCAGAATTACTGAGTT+GGG | + | chr8_4:7861959-7861978 | Msa1311180:intron | 35.0% | |
CAGTTGTAAAAAGGACCATA+AGG | - | chr8_4:7862069-7862088 | None:intergenic | 35.0% | |
! | CTTATGGTCCTTTTTACAAC+TGG | + | chr8_4:7862067-7862086 | Msa1311180:CDS | 35.0% |
TGCTAAGTCCAGTTGTAAAA+AGG | - | chr8_4:7862078-7862097 | None:intergenic | 35.0% | |
AACTGGACTTAGCAATGTTA+GGG | + | chr8_4:7862084-7862103 | Msa1311180:CDS | 35.0% | |
TTGTCATAGCTTCTTGGAAA+AGG | - | chr8_4:7862118-7862137 | None:intergenic | 35.0% | |
! | TTTTCCAAGAAGCTATGACA+AGG | + | chr8_4:7862117-7862136 | Msa1311180:CDS | 35.0% |
TCTTGCCATAAAGATTGGAA+TGG | - | chr8_4:7862200-7862219 | None:intergenic | 35.0% | |
ACTAGAAAGAACTTAGGATG+AGG | - | chr8_4:7862326-7862345 | None:intergenic | 35.0% | |
! | ACCCGGTTTGAGTATTTAAA+AGG | - | chr8_4:7858470-7858489 | None:intergenic | 35.0% |
ATTACGAATCAAAGGAATCC+TGG | - | chr8_4:7858681-7858700 | None:intergenic | 35.0% | |
AGATAAACGGTGGAAGATTT+GGG | - | chr8_4:7858782-7858801 | None:intergenic | 35.0% | |
TAGATAAACGGTGGAAGATT+TGG | - | chr8_4:7858783-7858802 | None:intergenic | 35.0% | |
GTTTATCTACTTATCACCGA+TGG | + | chr8_4:7858794-7858813 | Msa1311180:CDS | 35.0% | |
! | TGATATTTTGTAGGTTGTGG+TGG | + | chr8_4:7859453-7859472 | Msa1311180:intron | 35.0% |
GGAACCTGTATATTAGTTGA+AGG | + | chr8_4:7859514-7859533 | Msa1311180:CDS | 35.0% | |
CAGACCTTCAACTAATATAC+AGG | - | chr8_4:7859521-7859540 | None:intergenic | 35.0% | |
GAAACACGCTATTCAGTTAA+AGG | + | chr8_4:7859564-7859583 | Msa1311180:CDS | 35.0% | |
CTGACAAAGTTCTTCACATT+GGG | + | chr8_4:7859587-7859606 | Msa1311180:CDS | 35.0% | |
GTATCCATTATCGAAGAAAC+GGG | + | chr8_4:7859627-7859646 | Msa1311180:CDS | 35.0% | |
AAATCTCTTAATGCATCCAG+TGG | - | chr8_4:7859655-7859674 | None:intergenic | 35.0% | |
!! | TGTAAACCATGAAAGCATTC+AGG | - | chr8_4:7859774-7859793 | None:intergenic | 35.0% |
AGAACAGAAACATGAAAACG+TGG | - | chr8_4:7859821-7859840 | None:intergenic | 35.0% | |
! | TGCTTTAACTTCTAGAGGAA+GGG | + | chr8_4:7860041-7860060 | Msa1311180:intron | 35.0% |
TGATGCTTGGCTCATATATT+AGG | + | chr8_4:7860214-7860233 | Msa1311180:intron | 35.0% | |
CATGTTCCTTGAAAAATGAG+TGG | - | chr8_4:7860283-7860302 | None:intergenic | 35.0% | |
!! | TGTTAGCCTTGAAATTGTGA+AGG | + | chr8_4:7860436-7860455 | Msa1311180:CDS | 35.0% |
TGAAAAGAAGCGAAAGCAAT+AGG | + | chr8_4:7860495-7860514 | Msa1311180:CDS | 35.0% | |
GAAAAGAAGCGAAAGCAATA+GGG | + | chr8_4:7860496-7860515 | Msa1311180:CDS | 35.0% | |
TAATGAACTGGCATCACAAT+TGG | + | chr8_4:7860556-7860575 | Msa1311180:CDS | 35.0% | |
CAGAGACAGTCAAATAAGTT+TGG | - | chr8_4:7860658-7860677 | None:intergenic | 35.0% | |
CAAACTTATTTGACTGTCTC+TGG | + | chr8_4:7860656-7860675 | Msa1311180:CDS | 35.0% | |
CTTGGAAATGTGTATTCGTT+TGG | + | chr8_4:7860710-7860729 | Msa1311180:CDS | 35.0% | |
! | GTTTTATCTGCGTGAAATCT+AGG | - | chr8_4:7860737-7860756 | None:intergenic | 35.0% |
CTAAACATGTTGCAGAAATG+TGG | + | chr8_4:7860765-7860784 | Msa1311180:CDS | 35.0% | |
! | GCAAGTATGGTCAATTCTTT+TGG | - | chr8_4:7861098-7861117 | None:intergenic | 35.0% |
CGGATATATTCCACAACATT+TGG | - | chr8_4:7861215-7861234 | None:intergenic | 35.0% | |
TGAGGTGGCAAAAATCAAAA+CGG | - | chr8_4:7861235-7861254 | None:intergenic | 35.0% | |
GAGATGAAAAGTAAATGAGG+TGG | - | chr8_4:7861250-7861269 | None:intergenic | 35.0% | |
TTTCTTATCTTCAGCCTATG+AGG | - | chr8_4:7861313-7861332 | None:intergenic | 35.0% | |
GGATAATATCGACATACCTT+AGG | - | chr8_4:7861380-7861399 | None:intergenic | 35.0% | |
TCGATATTATCCTCATGTTC+TGG | + | chr8_4:7861388-7861407 | Msa1311180:intron | 35.0% | |
ATCAACAAATCCAGAACATG+AGG | - | chr8_4:7861401-7861420 | None:intergenic | 35.0% | |
! | ATTTGATCTTGTTGTCCCAA+AGG | + | chr8_4:7861593-7861612 | Msa1311180:CDS | 35.0% |
! | CAGGTTGGAACTATAATTTC+TGG | + | chr8_4:7861684-7861703 | Msa1311180:intron | 35.0% |
GTTAAATATGCCTGTTTCCT+TGG | + | chr8_4:7861900-7861919 | Msa1311180:intron | 35.0% | |
TATGGCAGAATTACTGAGTT+GGG | + | chr8_4:7861959-7861978 | Msa1311180:intron | 35.0% | |
CAGTTGTAAAAAGGACCATA+AGG | - | chr8_4:7862069-7862088 | None:intergenic | 35.0% | |
! | CTTATGGTCCTTTTTACAAC+TGG | + | chr8_4:7862067-7862086 | Msa1311180:CDS | 35.0% |
TGCTAAGTCCAGTTGTAAAA+AGG | - | chr8_4:7862078-7862097 | None:intergenic | 35.0% | |
AACTGGACTTAGCAATGTTA+GGG | + | chr8_4:7862084-7862103 | Msa1311180:CDS | 35.0% | |
TTGTCATAGCTTCTTGGAAA+AGG | - | chr8_4:7862118-7862137 | None:intergenic | 35.0% | |
! | TTTTCCAAGAAGCTATGACA+AGG | + | chr8_4:7862117-7862136 | Msa1311180:CDS | 35.0% |
TCTTGCCATAAAGATTGGAA+TGG | - | chr8_4:7862200-7862219 | None:intergenic | 35.0% | |
ACTAGAAAGAACTTAGGATG+AGG | - | chr8_4:7862326-7862345 | None:intergenic | 35.0% | |
GTGTTGGAAGAGAATTGAAG+AGG | - | chr8_4:7858275-7858294 | None:intergenic | 40.0% | |
!!! | CTTGGGTTTGCATTTTGGTT+TGG | - | chr8_4:7858400-7858419 | None:intergenic | 40.0% |
AAAATGCAAACCCAAGAACC+CGG | + | chr8_4:7858404-7858423 | Msa1311180:CDS | 40.0% | |
AGAATTGGGTTCTACTGAAC+CGG | - | chr8_4:7858426-7858445 | None:intergenic | 40.0% | |
!! | AGACTCGAGTGTTGAGAATT+GGG | - | chr8_4:7858440-7858459 | None:intergenic | 40.0% |
!! | AAGACTCGAGTGTTGAGAAT+TGG | - | chr8_4:7858441-7858460 | None:intergenic | 40.0% |
GGAGTTTATAGGACAAAGAG+TGG | + | chr8_4:7858532-7858551 | Msa1311180:CDS | 40.0% | |
GTTTATAGGACAAAGAGTGG+TGG | + | chr8_4:7858535-7858554 | Msa1311180:CDS | 40.0% | |
AGAAGATTTCTCGACTTCCT+TGG | - | chr8_4:7858582-7858601 | None:intergenic | 40.0% | |
!! | GGAGGTAAAGTTCTAGGAAT+AGG | - | chr8_4:7858761-7858780 | None:intergenic | 40.0% |
GATTTGGGAGGTAAAGTTCT+AGG | - | chr8_4:7858767-7858786 | None:intergenic | 40.0% | |
GGTGATAAGTAGATAAACGG+TGG | - | chr8_4:7858792-7858811 | None:intergenic | 40.0% | |
ACTAATATACAGGTTCCGGT+AGG | - | chr8_4:7859511-7859530 | None:intergenic | 40.0% | |
GCTGACAAAGTTCTTCACAT+TGG | + | chr8_4:7859586-7859605 | Msa1311180:CDS | 40.0% | |
AATTTCACCGTAGTTGTTCG+AGG | - | chr8_4:7859691-7859710 | None:intergenic | 40.0% | |
AAATATGGGGGTAAGGTTAG+AGG | - | chr8_4:7859850-7859869 | None:intergenic | 40.0% | |
!! | ATCCTCTAGAATGCTACGAA+TGG | - | chr8_4:7859883-7859902 | None:intergenic | 40.0% |
! | CTGCTTTAACTTCTAGAGGA+AGG | + | chr8_4:7860040-7860059 | Msa1311180:intron | 40.0% |
AAGCATGCTATTGGATCACA+TGG | - | chr8_4:7860118-7860137 | None:intergenic | 40.0% | |
TGCTTGGCTCATATATTAGG+TGG | + | chr8_4:7860217-7860236 | Msa1311180:intron | 40.0% | |
!! | TGCAACCCACTCATTTTTCA+AGG | + | chr8_4:7860274-7860293 | Msa1311180:CDS | 40.0% |
CAGTCTGTGGTTGTTATAGT+GGG | - | chr8_4:7860326-7860345 | None:intergenic | 40.0% | |
GATTCACTGTAGTTGTAACC+TGG | - | chr8_4:7860370-7860389 | None:intergenic | 40.0% | |
AGTGAATCAGAAAGCTGTCA+AGG | + | chr8_4:7860382-7860401 | Msa1311180:CDS | 40.0% | |
CAGCTTCCTTCACAATTTCA+AGG | - | chr8_4:7860445-7860464 | None:intergenic | 40.0% | |
GGAAGAGAAAAAATCTTCGG+AGG | - | chr8_4:7860636-7860655 | None:intergenic | 40.0% | |
ACATGTTGCAGAAATGTGGA+TGG | + | chr8_4:7860769-7860788 | Msa1311180:CDS | 40.0% | |
!! | TTTCTTCTATTCGGTTTGGG+TGG | + | chr8_4:7860938-7860957 | Msa1311180:intron | 40.0% |
CAAGTCATTAGCACAGTTCA+TGG | - | chr8_4:7861017-7861036 | None:intergenic | 40.0% | |
GAAGACGATCAATGCAAGTA+TGG | - | chr8_4:7861111-7861130 | None:intergenic | 40.0% | |
!! | ATGTTACTGGTTCTCCTCAT+AGG | + | chr8_4:7861296-7861315 | Msa1311180:intron | 40.0% |
! | ATCTTGTTGTCCCAAAGGTA+TGG | + | chr8_4:7861598-7861617 | Msa1311180:intron | 40.0% |
!! | TCACTTTTGGCCATACCTTT+GGG | - | chr8_4:7861611-7861630 | None:intergenic | 40.0% |
!! | ACTACAATGGCAGTCACTTT+TGG | - | chr8_4:7861624-7861643 | None:intergenic | 40.0% |
!! | AATTTCTGGCAGCCAAAATG+AGG | + | chr8_4:7861698-7861717 | Msa1311180:CDS | 40.0% |
GTATGGCAGAATTACTGAGT+TGG | + | chr8_4:7861958-7861977 | Msa1311180:intron | 40.0% | |
TACCATTCATACTTCTCTCG+CGG | - | chr8_4:7861989-7862008 | None:intergenic | 40.0% | |
!! | CACTCTAAGGTTTGACCTTA+TGG | + | chr8_4:7862051-7862070 | Msa1311180:CDS | 40.0% |
CAACTGGACTTAGCAATGTT+AGG | + | chr8_4:7862083-7862102 | Msa1311180:CDS | 40.0% | |
!! | GCTGACATTCAAGTTGTTCT+CGG | + | chr8_4:7862161-7862180 | Msa1311180:three_prime_UTR | 40.0% |
GTGTTGGAAGAGAATTGAAG+AGG | - | chr8_4:7858275-7858294 | None:intergenic | 40.0% | |
!!! | CTTGGGTTTGCATTTTGGTT+TGG | - | chr8_4:7858400-7858419 | None:intergenic | 40.0% |
AAAATGCAAACCCAAGAACC+CGG | + | chr8_4:7858404-7858423 | Msa1311180:CDS | 40.0% | |
AGAATTGGGTTCTACTGAAC+CGG | - | chr8_4:7858426-7858445 | None:intergenic | 40.0% | |
!! | AGACTCGAGTGTTGAGAATT+GGG | - | chr8_4:7858440-7858459 | None:intergenic | 40.0% |
!! | AAGACTCGAGTGTTGAGAAT+TGG | - | chr8_4:7858441-7858460 | None:intergenic | 40.0% |
GGAGTTTATAGGACAAAGAG+TGG | + | chr8_4:7858532-7858551 | Msa1311180:CDS | 40.0% | |
GTTTATAGGACAAAGAGTGG+TGG | + | chr8_4:7858535-7858554 | Msa1311180:CDS | 40.0% | |
AGAAGATTTCTCGACTTCCT+TGG | - | chr8_4:7858582-7858601 | None:intergenic | 40.0% | |
!! | GGAGGTAAAGTTCTAGGAAT+AGG | - | chr8_4:7858761-7858780 | None:intergenic | 40.0% |
GATTTGGGAGGTAAAGTTCT+AGG | - | chr8_4:7858767-7858786 | None:intergenic | 40.0% | |
GGTGATAAGTAGATAAACGG+TGG | - | chr8_4:7858792-7858811 | None:intergenic | 40.0% | |
ACTAATATACAGGTTCCGGT+AGG | - | chr8_4:7859511-7859530 | None:intergenic | 40.0% | |
GCTGACAAAGTTCTTCACAT+TGG | + | chr8_4:7859586-7859605 | Msa1311180:CDS | 40.0% | |
AATTTCACCGTAGTTGTTCG+AGG | - | chr8_4:7859691-7859710 | None:intergenic | 40.0% | |
AAATATGGGGGTAAGGTTAG+AGG | - | chr8_4:7859850-7859869 | None:intergenic | 40.0% | |
!! | ATCCTCTAGAATGCTACGAA+TGG | - | chr8_4:7859883-7859902 | None:intergenic | 40.0% |
! | CTGCTTTAACTTCTAGAGGA+AGG | + | chr8_4:7860040-7860059 | Msa1311180:intron | 40.0% |
AAGCATGCTATTGGATCACA+TGG | - | chr8_4:7860118-7860137 | None:intergenic | 40.0% | |
TGCTTGGCTCATATATTAGG+TGG | + | chr8_4:7860217-7860236 | Msa1311180:intron | 40.0% | |
!! | TGCAACCCACTCATTTTTCA+AGG | + | chr8_4:7860274-7860293 | Msa1311180:CDS | 40.0% |
CAGTCTGTGGTTGTTATAGT+GGG | - | chr8_4:7860326-7860345 | None:intergenic | 40.0% | |
GATTCACTGTAGTTGTAACC+TGG | - | chr8_4:7860370-7860389 | None:intergenic | 40.0% | |
AGTGAATCAGAAAGCTGTCA+AGG | + | chr8_4:7860382-7860401 | Msa1311180:CDS | 40.0% | |
CAGCTTCCTTCACAATTTCA+AGG | - | chr8_4:7860445-7860464 | None:intergenic | 40.0% | |
GGAAGAGAAAAAATCTTCGG+AGG | - | chr8_4:7860636-7860655 | None:intergenic | 40.0% | |
ACATGTTGCAGAAATGTGGA+TGG | + | chr8_4:7860769-7860788 | Msa1311180:CDS | 40.0% | |
!! | TTTCTTCTATTCGGTTTGGG+TGG | + | chr8_4:7860938-7860957 | Msa1311180:intron | 40.0% |
CAAGTCATTAGCACAGTTCA+TGG | - | chr8_4:7861017-7861036 | None:intergenic | 40.0% | |
GAAGACGATCAATGCAAGTA+TGG | - | chr8_4:7861111-7861130 | None:intergenic | 40.0% | |
!! | ATGTTACTGGTTCTCCTCAT+AGG | + | chr8_4:7861296-7861315 | Msa1311180:intron | 40.0% |
! | ATCTTGTTGTCCCAAAGGTA+TGG | + | chr8_4:7861598-7861617 | Msa1311180:intron | 40.0% |
!! | TCACTTTTGGCCATACCTTT+GGG | - | chr8_4:7861611-7861630 | None:intergenic | 40.0% |
!! | ACTACAATGGCAGTCACTTT+TGG | - | chr8_4:7861624-7861643 | None:intergenic | 40.0% |
!! | AATTTCTGGCAGCCAAAATG+AGG | + | chr8_4:7861698-7861717 | Msa1311180:CDS | 40.0% |
GTATGGCAGAATTACTGAGT+TGG | + | chr8_4:7861958-7861977 | Msa1311180:intron | 40.0% | |
TACCATTCATACTTCTCTCG+CGG | - | chr8_4:7861989-7862008 | None:intergenic | 40.0% | |
!! | CACTCTAAGGTTTGACCTTA+TGG | + | chr8_4:7862051-7862070 | Msa1311180:CDS | 40.0% |
CAACTGGACTTAGCAATGTT+AGG | + | chr8_4:7862083-7862102 | Msa1311180:CDS | 40.0% | |
!! | GCTGACATTCAAGTTGTTCT+CGG | + | chr8_4:7862161-7862180 | Msa1311180:three_prime_UTR | 40.0% |
! | GGGTTCTTGGGTTTGCATTT+TGG | - | chr8_4:7858405-7858424 | None:intergenic | 45.0% |
TTCTACTGAACCGGGTTCTT+GGG | - | chr8_4:7858417-7858436 | None:intergenic | 45.0% | |
GAATTGGGTTCTACTGAACC+GGG | - | chr8_4:7858425-7858444 | None:intergenic | 45.0% | |
! | CTTTTTCTAGACCGAACCGA+CGG | + | chr8_4:7858503-7858522 | Msa1311180:CDS | 45.0% |
TATAGGACAAAGAGTGGTGG+TGG | + | chr8_4:7858538-7858557 | Msa1311180:CDS | 45.0% | |
ATAGGACAAAGAGTGGTGGT+GGG | + | chr8_4:7858539-7858558 | Msa1311180:CDS | 45.0% | |
ACACATGACACGTCTTTCAC+CGG | - | chr8_4:7858644-7858663 | None:intergenic | 45.0% | |
TAAACGGTGGAAGATTTGGG+AGG | - | chr8_4:7858779-7858798 | None:intergenic | 45.0% | |
TAGAACGACCAGCAACTGAA+GGG | + | chr8_4:7859542-7859561 | Msa1311180:CDS | 45.0% | |
CACATTGGGACAGTAGACAT+TGG | + | chr8_4:7859601-7859620 | Msa1311180:CDS | 45.0% | |
GGAACCCGTTTCTTCGATAA+TGG | - | chr8_4:7859634-7859653 | None:intergenic | 45.0% | |
AGTTGTTCGAGGCCGAAAAT+GGG | - | chr8_4:7859680-7859699 | None:intergenic | 45.0% | |
TAGTTGTTCGAGGCCGAAAA+TGG | - | chr8_4:7859681-7859700 | None:intergenic | 45.0% | |
! | TTTTCGGCCTCGAACAACTA+CGG | + | chr8_4:7859681-7859700 | Msa1311180:CDS | 45.0% |
!! | CCATGAAAGCATTCAGGTTC+TGG | - | chr8_4:7859768-7859787 | None:intergenic | 45.0% |
CCAGAACCTGAATGCTTTCA+TGG | + | chr8_4:7859765-7859784 | Msa1311180:intron | 45.0% | |
AGCCATTCGTAGCATTCTAG+AGG | + | chr8_4:7859878-7859897 | Msa1311180:intron | 45.0% | |
TCTAGAGGAAGGGTTGAGAT+AGG | + | chr8_4:7860051-7860070 | Msa1311180:intron | 45.0% | |
GCAGTCTGTGGTTGTTATAG+TGG | - | chr8_4:7860327-7860346 | None:intergenic | 45.0% | |
ATAACAACCACAGACTGCGA+AGG | + | chr8_4:7860329-7860348 | Msa1311180:CDS | 45.0% | |
AGGATTAGGCAACATGTTCC+AGG | + | chr8_4:7860349-7860368 | Msa1311180:CDS | 45.0% | |
GAGAGTTATGCATGTGCTCT+TGG | + | chr8_4:7860692-7860711 | Msa1311180:CDS | 45.0% | |
TGCAGAAATGTGGATGGTTG+AGG | + | chr8_4:7860775-7860794 | Msa1311180:CDS | 45.0% | |
TGTTCAAGTACCTCTGTGAG+CGG | + | chr8_4:7861035-7861054 | Msa1311180:CDS | 45.0% | |
GACTCACTTCAGATCACCTA+AGG | + | chr8_4:7861361-7861380 | Msa1311180:CDS | 45.0% | |
!!! | GTCACTTTTGGCCATACCTT+TGG | - | chr8_4:7861612-7861631 | None:intergenic | 45.0% |
GGCTTACTGTGATAAACTCG+AGG | + | chr8_4:7861724-7861743 | Msa1311180:CDS | 45.0% | |
AATGGAACGGTTAAGCGATC+AGG | + | chr8_4:7862025-7862044 | Msa1311180:CDS | 45.0% | |
ATGGAACGGTTAAGCGATCA+GGG | + | chr8_4:7862026-7862045 | Msa1311180:CDS | 45.0% | |
!! | TTGGCCTTGTCATAGCTTCT+TGG | - | chr8_4:7862124-7862143 | None:intergenic | 45.0% |
!! | GACATTCAAGTTGTTCTCGG+AGG | + | chr8_4:7862164-7862183 | Msa1311180:three_prime_UTR | 45.0% |
! | GGGTTCTTGGGTTTGCATTT+TGG | - | chr8_4:7858405-7858424 | None:intergenic | 45.0% |
TTCTACTGAACCGGGTTCTT+GGG | - | chr8_4:7858417-7858436 | None:intergenic | 45.0% | |
GAATTGGGTTCTACTGAACC+GGG | - | chr8_4:7858425-7858444 | None:intergenic | 45.0% | |
! | CTTTTTCTAGACCGAACCGA+CGG | + | chr8_4:7858503-7858522 | Msa1311180:CDS | 45.0% |
TATAGGACAAAGAGTGGTGG+TGG | + | chr8_4:7858538-7858557 | Msa1311180:CDS | 45.0% | |
ATAGGACAAAGAGTGGTGGT+GGG | + | chr8_4:7858539-7858558 | Msa1311180:CDS | 45.0% | |
ACACATGACACGTCTTTCAC+CGG | - | chr8_4:7858644-7858663 | None:intergenic | 45.0% | |
TAAACGGTGGAAGATTTGGG+AGG | - | chr8_4:7858779-7858798 | None:intergenic | 45.0% | |
TAGAACGACCAGCAACTGAA+GGG | + | chr8_4:7859542-7859561 | Msa1311180:CDS | 45.0% | |
CACATTGGGACAGTAGACAT+TGG | + | chr8_4:7859601-7859620 | Msa1311180:CDS | 45.0% | |
GGAACCCGTTTCTTCGATAA+TGG | - | chr8_4:7859634-7859653 | None:intergenic | 45.0% | |
AGTTGTTCGAGGCCGAAAAT+GGG | - | chr8_4:7859680-7859699 | None:intergenic | 45.0% | |
TAGTTGTTCGAGGCCGAAAA+TGG | - | chr8_4:7859681-7859700 | None:intergenic | 45.0% | |
! | TTTTCGGCCTCGAACAACTA+CGG | + | chr8_4:7859681-7859700 | Msa1311180:CDS | 45.0% |
!! | CCATGAAAGCATTCAGGTTC+TGG | - | chr8_4:7859768-7859787 | None:intergenic | 45.0% |
CCAGAACCTGAATGCTTTCA+TGG | + | chr8_4:7859765-7859784 | Msa1311180:intron | 45.0% | |
AGCCATTCGTAGCATTCTAG+AGG | + | chr8_4:7859878-7859897 | Msa1311180:intron | 45.0% | |
TCTAGAGGAAGGGTTGAGAT+AGG | + | chr8_4:7860051-7860070 | Msa1311180:intron | 45.0% | |
GCAGTCTGTGGTTGTTATAG+TGG | - | chr8_4:7860327-7860346 | None:intergenic | 45.0% | |
ATAACAACCACAGACTGCGA+AGG | + | chr8_4:7860329-7860348 | Msa1311180:CDS | 45.0% | |
AGGATTAGGCAACATGTTCC+AGG | + | chr8_4:7860349-7860368 | Msa1311180:CDS | 45.0% | |
GAGAGTTATGCATGTGCTCT+TGG | + | chr8_4:7860692-7860711 | Msa1311180:CDS | 45.0% | |
TGCAGAAATGTGGATGGTTG+AGG | + | chr8_4:7860775-7860794 | Msa1311180:CDS | 45.0% | |
TGTTCAAGTACCTCTGTGAG+CGG | + | chr8_4:7861035-7861054 | Msa1311180:CDS | 45.0% | |
GACTCACTTCAGATCACCTA+AGG | + | chr8_4:7861361-7861380 | Msa1311180:CDS | 45.0% | |
!!! | GTCACTTTTGGCCATACCTT+TGG | - | chr8_4:7861612-7861631 | None:intergenic | 45.0% |
GGCTTACTGTGATAAACTCG+AGG | + | chr8_4:7861724-7861743 | Msa1311180:CDS | 45.0% | |
AATGGAACGGTTAAGCGATC+AGG | + | chr8_4:7862025-7862044 | Msa1311180:CDS | 45.0% | |
ATGGAACGGTTAAGCGATCA+GGG | + | chr8_4:7862026-7862045 | Msa1311180:CDS | 45.0% | |
!! | TTGGCCTTGTCATAGCTTCT+TGG | - | chr8_4:7862124-7862143 | None:intergenic | 45.0% |
!! | GACATTCAAGTTGTTCTCGG+AGG | + | chr8_4:7862164-7862183 | Msa1311180:three_prime_UTR | 45.0% |
GTTCTACTGAACCGGGTTCT+TGG | - | chr8_4:7858418-7858437 | None:intergenic | 50.0% | |
TATAAACTCCGAACCGCCGT+CGG | - | chr8_4:7858522-7858541 | None:intergenic | 50.0% | |
ATATCATCGTCGGCCGTCAA+TGG | - | chr8_4:7858617-7858636 | None:intergenic | 50.0% | |
CACCGGCGTTATATCATCGT+CGG | - | chr8_4:7858627-7858646 | None:intergenic | 50.0% | |
GGTGAAAGACGTGTCATGTG+TGG | + | chr8_4:7858643-7858662 | Msa1311180:CDS | 50.0% | |
GTGTGGAGATTCTTCAGTCC+AGG | + | chr8_4:7858660-7858679 | Msa1311180:CDS | 50.0% | |
CGTGGCAACAGATGAACCAT+CGG | - | chr8_4:7858813-7858832 | None:intergenic | 50.0% | |
TTCATCTGTTGCCACGCTTC+AGG | + | chr8_4:7858817-7858836 | Msa1311180:CDS | 50.0% | |
GAAAACACGAACCTGAAGCG+TGG | - | chr8_4:7858831-7858850 | None:intergenic | 50.0% | |
!! | CCTAGCCTTCTTTTGCCTAC+CGG | + | chr8_4:7859493-7859512 | Msa1311180:CDS | 50.0% |
AGGTTCCGGTAGGCAAAAGA+AGG | - | chr8_4:7859501-7859520 | None:intergenic | 50.0% | |
CTAGAACGACCAGCAACTGA+AGG | + | chr8_4:7859541-7859560 | Msa1311180:CDS | 50.0% | |
! | ATCGAAGAAACGGGTTCCAC+TGG | + | chr8_4:7859636-7859655 | Msa1311180:CDS | 50.0% |
ACCACAGACTGCGAAGGATT+AGG | + | chr8_4:7860335-7860354 | Msa1311180:CDS | 50.0% | |
TGTCTCTGGTCGCTTACATC+TGG | + | chr8_4:7860670-7860689 | Msa1311180:CDS | 50.0% | |
GTGGATGGTTGAGGCTGAAA+TGG | + | chr8_4:7860784-7860803 | Msa1311180:CDS | 50.0% | |
GTTCAAGTACCTCTGTGAGC+GGG | + | chr8_4:7861036-7861055 | Msa1311180:CDS | 50.0% | |
TTTCCAAAACCCGCTCACAG+AGG | - | chr8_4:7861048-7861067 | None:intergenic | 50.0% | |
! | CAGTAAGCCGCTCCTCATTT+TGG | - | chr8_4:7861713-7861732 | None:intergenic | 50.0% |
! | TGCCGCGAGAGAAGTATGAA+TGG | + | chr8_4:7861984-7862003 | Msa1311180:CDS | 50.0% |
AGCGATCAGGGTTCACTCTA+AGG | + | chr8_4:7862038-7862057 | Msa1311180:CDS | 50.0% | |
GTTCTACTGAACCGGGTTCT+TGG | - | chr8_4:7858418-7858437 | None:intergenic | 50.0% | |
TATAAACTCCGAACCGCCGT+CGG | - | chr8_4:7858522-7858541 | None:intergenic | 50.0% | |
ATATCATCGTCGGCCGTCAA+TGG | - | chr8_4:7858617-7858636 | None:intergenic | 50.0% | |
CACCGGCGTTATATCATCGT+CGG | - | chr8_4:7858627-7858646 | None:intergenic | 50.0% | |
GGTGAAAGACGTGTCATGTG+TGG | + | chr8_4:7858643-7858662 | Msa1311180:CDS | 50.0% | |
GTGTGGAGATTCTTCAGTCC+AGG | + | chr8_4:7858660-7858679 | Msa1311180:CDS | 50.0% | |
CGTGGCAACAGATGAACCAT+CGG | - | chr8_4:7858813-7858832 | None:intergenic | 50.0% | |
TTCATCTGTTGCCACGCTTC+AGG | + | chr8_4:7858817-7858836 | Msa1311180:CDS | 50.0% | |
GAAAACACGAACCTGAAGCG+TGG | - | chr8_4:7858831-7858850 | None:intergenic | 50.0% | |
!! | CCTAGCCTTCTTTTGCCTAC+CGG | + | chr8_4:7859493-7859512 | Msa1311180:CDS | 50.0% |
AGGTTCCGGTAGGCAAAAGA+AGG | - | chr8_4:7859501-7859520 | None:intergenic | 50.0% | |
CTAGAACGACCAGCAACTGA+AGG | + | chr8_4:7859541-7859560 | Msa1311180:CDS | 50.0% | |
! | ATCGAAGAAACGGGTTCCAC+TGG | + | chr8_4:7859636-7859655 | Msa1311180:CDS | 50.0% |
ACCACAGACTGCGAAGGATT+AGG | + | chr8_4:7860335-7860354 | Msa1311180:CDS | 50.0% | |
TGTCTCTGGTCGCTTACATC+TGG | + | chr8_4:7860670-7860689 | Msa1311180:CDS | 50.0% | |
GTGGATGGTTGAGGCTGAAA+TGG | + | chr8_4:7860784-7860803 | Msa1311180:CDS | 50.0% | |
GTTCAAGTACCTCTGTGAGC+GGG | + | chr8_4:7861036-7861055 | Msa1311180:CDS | 50.0% | |
TTTCCAAAACCCGCTCACAG+AGG | - | chr8_4:7861048-7861067 | None:intergenic | 50.0% | |
! | CAGTAAGCCGCTCCTCATTT+TGG | - | chr8_4:7861713-7861732 | None:intergenic | 50.0% |
! | TGCCGCGAGAGAAGTATGAA+TGG | + | chr8_4:7861984-7862003 | Msa1311180:CDS | 50.0% |
AGCGATCAGGGTTCACTCTA+AGG | + | chr8_4:7862038-7862057 | Msa1311180:CDS | 50.0% | |
TTTCTAGACCGAACCGACGG+CGG | + | chr8_4:7858506-7858525 | Msa1311180:CDS | 55.0% | |
! | GACGGCGGTTCGGAGTTTAT+AGG | + | chr8_4:7858521-7858540 | Msa1311180:CDS | 55.0% |
CGGATGGGTGAAGTCATCCA+AGG | + | chr8_4:7858562-7858581 | Msa1311180:CDS | 55.0% | |
GGCCGACGATGATATAACGC+CGG | + | chr8_4:7858622-7858641 | Msa1311180:CDS | 55.0% | |
CCGGTAGGCAAAAGAAGGCT+AGG | - | chr8_4:7859496-7859515 | None:intergenic | 55.0% | |
GCGTGTTTCCCTTCAGTTGC+TGG | - | chr8_4:7859553-7859572 | None:intergenic | 55.0% | |
GCCTAATCCTTCGCAGTCTG+TGG | - | chr8_4:7860339-7860358 | None:intergenic | 55.0% | |
! | CGAAAGCAATAGGGAAGCGC+TGG | + | chr8_4:7860505-7860524 | Msa1311180:CDS | 55.0% |
!! | GTACCTCTGTGAGCGGGTTT+TGG | + | chr8_4:7861042-7861061 | Msa1311180:CDS | 55.0% |
CTGGCAGCCAAAATGAGGAG+CGG | + | chr8_4:7861703-7861722 | Msa1311180:CDS | 55.0% | |
TTTCTAGACCGAACCGACGG+CGG | + | chr8_4:7858506-7858525 | Msa1311180:CDS | 55.0% | |
! | GACGGCGGTTCGGAGTTTAT+AGG | + | chr8_4:7858521-7858540 | Msa1311180:CDS | 55.0% |
CGGATGGGTGAAGTCATCCA+AGG | + | chr8_4:7858562-7858581 | Msa1311180:CDS | 55.0% | |
GGCCGACGATGATATAACGC+CGG | + | chr8_4:7858622-7858641 | Msa1311180:CDS | 55.0% | |
CCGGTAGGCAAAAGAAGGCT+AGG | - | chr8_4:7859496-7859515 | None:intergenic | 55.0% | |
GCGTGTTTCCCTTCAGTTGC+TGG | - | chr8_4:7859553-7859572 | None:intergenic | 55.0% | |
GCCTAATCCTTCGCAGTCTG+TGG | - | chr8_4:7860339-7860358 | None:intergenic | 55.0% | |
! | CGAAAGCAATAGGGAAGCGC+TGG | + | chr8_4:7860505-7860524 | Msa1311180:CDS | 55.0% |
!! | GTACCTCTGTGAGCGGGTTT+TGG | + | chr8_4:7861042-7861061 | Msa1311180:CDS | 55.0% |
CTGGCAGCCAAAATGAGGAG+CGG | + | chr8_4:7861703-7861722 | Msa1311180:CDS | 55.0% | |
!! | GGACAAAGAGTGGTGGTGGG+CGG | + | chr8_4:7858542-7858561 | Msa1311180:CDS | 60.0% |
!! | AAAGAGTGGTGGTGGGCGGA+TGG | + | chr8_4:7858546-7858565 | Msa1311180:CDS | 60.0% |
!! | AAGAGTGGTGGTGGGCGGAT+GGG | + | chr8_4:7858547-7858566 | Msa1311180:CDS | 60.0% |
TCATCGTCGGCCGTCAATGG+CGG | - | chr8_4:7858614-7858633 | None:intergenic | 60.0% | |
!! | GGACAAAGAGTGGTGGTGGG+CGG | + | chr8_4:7858542-7858561 | Msa1311180:CDS | 60.0% |
!! | AAAGAGTGGTGGTGGGCGGA+TGG | + | chr8_4:7858546-7858565 | Msa1311180:CDS | 60.0% |
!! | AAGAGTGGTGGTGGGCGGAT+GGG | + | chr8_4:7858547-7858566 | Msa1311180:CDS | 60.0% |
TCATCGTCGGCCGTCAATGG+CGG | - | chr8_4:7858614-7858633 | None:intergenic | 60.0% | |
AGACCGAACCGACGGCGGTT+CGG | + | chr8_4:7858511-7858530 | Msa1311180:CDS | 65.0% | |
! | ACTCCGAACCGCCGTCGGTT+CGG | - | chr8_4:7858517-7858536 | None:intergenic | 65.0% |
TCCACCTCCGCCGCCATTGA+CGG | + | chr8_4:7858601-7858620 | Msa1311180:CDS | 65.0% | |
AGACCGAACCGACGGCGGTT+CGG | + | chr8_4:7858511-7858530 | Msa1311180:CDS | 65.0% | |
! | ACTCCGAACCGCCGTCGGTT+CGG | - | chr8_4:7858517-7858536 | None:intergenic | 65.0% |
TCCACCTCCGCCGCCATTGA+CGG | + | chr8_4:7858601-7858620 | Msa1311180:CDS | 65.0% | |
TCGTCGGCCGTCAATGGCGG+CGG | - | chr8_4:7858611-7858630 | None:intergenic | 70.0% | |
TCGTCGGCCGTCAATGGCGG+CGG | - | chr8_4:7858611-7858630 | None:intergenic | 70.0% | |
GCCGTCAATGGCGGCGGAGG+TGG | - | chr8_4:7858605-7858624 | None:intergenic | 75.0% | |
TCGGCCGTCAATGGCGGCGG+AGG | - | chr8_4:7858608-7858627 | None:intergenic | 75.0% | |
GCCGTCAATGGCGGCGGAGG+TGG | - | chr8_4:7858605-7858624 | None:intergenic | 75.0% | |
TCGGCCGTCAATGGCGGCGG+AGG | - | chr8_4:7858608-7858627 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 7858266 | 7862350 | 7858266 | ID=Msa1311180;Name=Msa1311180 |
chr8_4 | mRNA | 7858266 | 7862350 | 7858266 | ID=Msa1311180-mRNA-1;Parent=Msa1311180;Name=Msa1311180-mRNA-1;_AED=0.10;_eAED=0.10;_QI=117|1|1|1|1|1|8|200|633 |
chr8_4 | exon | 7858266 | 7858838 | 7858266 | ID=Msa1311180-mRNA-1:exon:2878;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7859466 | 7859702 | 7859466 | ID=Msa1311180-mRNA-1:exon:2879;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7860236 | 7860823 | 7860236 | ID=Msa1311180-mRNA-1:exon:2880;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7861010 | 7861195 | 7861010 | ID=Msa1311180-mRNA-1:exon:2881;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7861318 | 7861382 | 7861318 | ID=Msa1311180-mRNA-1:exon:2882;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7861488 | 7861614 | 7861488 | ID=Msa1311180-mRNA-1:exon:2883;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7861687 | 7861745 | 7861687 | ID=Msa1311180-mRNA-1:exon:2884;Parent=Msa1311180-mRNA-1 |
chr8_4 | exon | 7861967 | 7862350 | 7861967 | ID=Msa1311180-mRNA-1:exon:2885;Parent=Msa1311180-mRNA-1 |
chr8_4 | five_prime_UTR | 7858266 | 7858382 | 7858266 | ID=Msa1311180-mRNA-1:five_prime_utr;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7858383 | 7858838 | 7858383 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7859466 | 7859702 | 7859466 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7860236 | 7860823 | 7860236 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7861010 | 7861195 | 7861010 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7861318 | 7861382 | 7861318 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7861488 | 7861614 | 7861488 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7861687 | 7861745 | 7861687 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | CDS | 7861967 | 7862150 | 7861967 | ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1 |
chr8_4 | three_prime_UTR | 7862151 | 7862350 | 7862151 | ID=Msa1311180-mRNA-1:three_prime_utr;Parent=Msa1311180-mRNA-1 |
Gene Sequence |
Protein sequence |