AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1311180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311180 MtrunA17_Chr8g0338601 96.840 633 20 0 1 633 1 633 0.0 1264
Msa1311180 MtrunA17_Chr8g0389541 46.382 539 277 7 103 632 15 550 1.10e-171 500
Msa1311180 MtrunA17_Chr7g0263951 42.955 582 274 15 100 632 30 602 2.70e-150 447
Msa1311180 MtrunA17_Chr4g0056161 43.023 172 96 2 359 529 271 441 1.17e-40 154
Msa1311180 MtrunA17_Chr4g0056151 53.000 100 46 1 529 627 29 128 1.15e-29 114
Msa1311180 MtrunA17_Chr1g0150111 23.420 269 185 9 367 626 278 534 1.46e-11 67.4
Msa1311180 MtrunA17_Chr5g0410321 23.256 258 183 9 375 626 351 599 5.67e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311180 AT3G07420.1 54.662 622 263 9 27 633 21 638 0.0 659
Msa1311180 AT3G07420.2 52.200 500 221 8 27 512 21 516 7.60e-167 488
Msa1311180 AT5G56680.1 44.640 569 298 8 77 632 7 571 1.56e-162 478
Msa1311180 AT1G70980.1 43.433 571 304 10 74 632 7 570 1.44e-154 457
Msa1311180 AT4G17300.1 39.024 533 248 14 107 627 94 561 2.71e-111 346
Msa1311180 AT4G17300.2 38.649 533 250 13 107 627 114 581 3.04e-110 343
Msa1311180 AT1G68420.1 44.156 77 43 0 390 466 1 77 3.01e-22 91.7
Msa1311180 AT4G26870.1 24.060 266 187 8 367 626 269 525 8.19e-15 78.2
Msa1311180 AT4G31180.1 24.324 259 179 7 375 626 303 551 3.66e-14 76.3
Msa1311180 AT4G31180.2 24.324 259 179 7 375 626 303 551 3.66e-14 76.3

Find 146 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAACAATTAATTATATTT+TGG 0.151590 8_4:+7862139 Msa1311180:exon
CACTCTAAGGTTTGACCTTA+TGG 0.152415 8_4:+7862051 Msa1311180:CDS
TATTGCCATTCCAATCTTTA+TGG 0.160570 8_4:+7862192 Msa1311180:three_prime_UTR
TAGTTGTTCGAGGCCGAAAA+TGG 0.182068 8_4:-7859678 None:intergenic
TACTTAGATCTTTGTCTAAA+TGG 0.191154 8_4:+7862007 Msa1311180:CDS
GGGTTCTTGGGTTTGCATTT+TGG 0.197678 8_4:-7858402 None:intergenic
TCATTGTAGGAAATTATTTC+AGG 0.237774 8_4:-7861151 None:intergenic
GCAAGTATGGTCAATTCTTT+TGG 0.255458 8_4:-7861095 None:intergenic
TAGATAAACGGTGGAAGATT+TGG 0.258493 8_4:-7858780 None:intergenic
TCCTTTGATTCGTAATATAA+TGG 0.260762 8_4:+7858685 Msa1311180:CDS
ACCCGGTTTGAGTATTTAAA+AGG 0.263270 8_4:-7858467 None:intergenic
GTTCTACTGAACCGGGTTCT+TGG 0.267088 8_4:-7858415 None:intergenic
CAGGTTGGAACTATAATTTC+TGG 0.270152 8_4:+7861684 Msa1311180:intron
GTACCTCTGTGAGCGGGTTT+TGG 0.287072 8_4:+7861042 Msa1311180:CDS
TCTGAAACAAAGTTTGATTC+AGG 0.291073 8_4:+7861333 Msa1311180:CDS
AAAATTGGGAACTTCATTAA+AGG 0.291848 8_4:+7860595 Msa1311180:CDS
CAGTAAGCCGCTCCTCATTT+TGG 0.293097 8_4:-7861710 None:intergenic
GAAACACGCTATTCAGTTAA+AGG 0.298326 8_4:+7859564 Msa1311180:CDS
TTGGCCTTGTCATAGCTTCT+TGG 0.301625 8_4:-7862121 None:intergenic
TGCTAAGTCCAGTTGTAAAA+AGG 0.311493 8_4:-7862075 None:intergenic
ACAATGTATAACTGTATATA+AGG 0.314664 8_4:+7862271 Msa1311180:three_prime_UTR
TTCATCTGTTGCCACGCTTC+AGG 0.316021 8_4:+7858817 Msa1311180:CDS
GCGTGTTTCCCTTCAGTTGC+TGG 0.318317 8_4:-7859550 None:intergenic
GGAACCCGTTTCTTCGATAA+TGG 0.318986 8_4:-7859631 None:intergenic
CAACTGGACTTAGCAATGTT+AGG 0.320784 8_4:+7862083 Msa1311180:CDS
CAGAGACAGTCAAATAAGTT+TGG 0.322621 8_4:-7860655 None:intergenic
TTCTACTGAACCGGGTTCTT+GGG 0.332682 8_4:-7858414 None:intergenic
AAGACTCGAGTGTTGAGAAT+TGG 0.334511 8_4:-7858438 None:intergenic
GGAGGTAAAGTTCTAGGAAT+AGG 0.339571 8_4:-7858758 None:intergenic
AGCGATCAGGGTTCACTCTA+AGG 0.340817 8_4:+7862038 Msa1311180:CDS
CAAACTTATTTGACTGTCTC+TGG 0.344220 8_4:+7860656 Msa1311180:CDS
TGAAAAGAAGCGAAAGCAAT+AGG 0.348641 8_4:+7860495 Msa1311180:CDS
GGATAACTGTGAATTATAAC+TGG 0.352936 8_4:-7861516 None:intergenic
TAGAATGGTTTAGCTTCTTT+CGG 0.355064 8_4:-7861537 None:intergenic
GATTTGGGAGGTAAAGTTCT+AGG 0.355145 8_4:-7858764 None:intergenic
AGATAAACGGTGGAAGATTT+GGG 0.361531 8_4:-7858779 None:intergenic
TTACATCTTGCCATAAAGAT+TGG 0.369130 8_4:-7862202 None:intergenic
GCCGTCAATGGCGGCGGAGG+TGG 0.369307 8_4:-7858602 None:intergenic
CTTGGAAATGTGTATTCGTT+TGG 0.371840 8_4:+7860710 Msa1311180:CDS
CAAGTCATTAGCACAGTTCA+TGG 0.373907 8_4:-7861014 None:intergenic
AGAATTGGGTTCTACTGAAC+CGG 0.376232 8_4:-7858423 None:intergenic
GCAGTCTGTGGTTGTTATAG+TGG 0.378976 8_4:-7860324 None:intergenic
AGGATTAGGCAACATGTTCC+AGG 0.380097 8_4:+7860349 Msa1311180:CDS
TAATGAACTGGCATCACAAT+TGG 0.393100 8_4:+7860556 Msa1311180:CDS
TCCACCTCCGCCGCCATTGA+CGG 0.393557 8_4:+7858601 Msa1311180:CDS
AGACTCGAGTGTTGAGAATT+GGG 0.393908 8_4:-7858437 None:intergenic
GCTGACATTCAAGTTGTTCT+CGG 0.399739 8_4:+7862161 Msa1311180:three_prime_UTR
TTCAACTAATATACAGGTTC+CGG 0.402905 8_4:-7859512 None:intergenic
TGTCTCTGGTCGCTTACATC+TGG 0.403823 8_4:+7860670 Msa1311180:CDS
CAGCTTCCTTCACAATTTCA+AGG 0.406326 8_4:-7860442 None:intergenic
AAAGAGTGGTGGTGGGCGGA+TGG 0.415250 8_4:+7858546 Msa1311180:CDS
GAGAGTTATGCATGTGCTCT+TGG 0.418765 8_4:+7860692 Msa1311180:CDS
GCCAAAATATAATTAATTGT+TGG 0.420885 8_4:-7862140 None:intergenic
AACATCTAAAGCTTCATTGT+AGG 0.422900 8_4:-7861164 None:intergenic
AATGGAACGGTTAAGCGATC+AGG 0.423765 8_4:+7862025 Msa1311180:CDS
GAAGACGATCAATGCAAGTA+TGG 0.434014 8_4:-7861108 None:intergenic
TATGGCAGAATTACTGAGTT+GGG 0.435795 8_4:+7861959 Msa1311180:intron
AGAGACAGTCAAATAAGTTT+GGG 0.437294 8_4:-7860654 None:intergenic
ACTCCGAACCGCCGTCGGTT+CGG 0.438956 8_4:-7858514 None:intergenic
AGAAGATTTCTCGACTTCCT+TGG 0.440040 8_4:-7858579 None:intergenic
TTGTCATAGCTTCTTGGAAA+AGG 0.441390 8_4:-7862115 None:intergenic
TCTGAAGAAAACTAATGAAC+TGG 0.446328 8_4:+7860544 Msa1311180:CDS
AGCTTTAGATGTTCTTAGAA+AGG 0.447084 8_4:+7861174 Msa1311180:CDS
TCATTAACTCGAACATAGAA+TGG 0.451235 8_4:-7861552 None:intergenic
CTGACAAAGTTCTTCACATT+GGG 0.455791 8_4:+7859587 Msa1311180:CDS
GACGGCGGTTCGGAGTTTAT+AGG 0.459245 8_4:+7858521 Msa1311180:CDS
AGTTGTTCGAGGCCGAAAAT+GGG 0.464152 8_4:-7859677 None:intergenic
AACTGGACTTAGCAATGTTA+GGG 0.464228 8_4:+7862084 Msa1311180:CDS
CAGACCTTCAACTAATATAC+AGG 0.464667 8_4:-7859518 None:intergenic
TCGGCCGTCAATGGCGGCGG+AGG 0.467359 8_4:-7858605 None:intergenic
AGACCGAACCGACGGCGGTT+CGG 0.470522 8_4:+7858511 Msa1311180:CDS
ATCGGTGATAAGTAGATAAA+CGG 0.470668 8_4:-7858792 None:intergenic
GTGGATGGTTGAGGCTGAAA+TGG 0.471045 8_4:+7860784 Msa1311180:CDS
ACCACAGACTGCGAAGGATT+AGG 0.477904 8_4:+7860335 Msa1311180:CDS
AGTATCCATTATCGAAGAAA+CGG 0.484436 8_4:+7859626 Msa1311180:CDS
TCGTCGGCCGTCAATGGCGG+CGG 0.488913 8_4:-7858608 None:intergenic
ATTACGAATCAAAGGAATCC+TGG 0.489549 8_4:-7858678 None:intergenic
GTGTGGAGATTCTTCAGTCC+AGG 0.490135 8_4:+7858660 Msa1311180:CDS
AATTTCACCGTAGTTGTTCG+AGG 0.491987 8_4:-7859688 None:intergenic
ATATCATCGTCGGCCGTCAA+TGG 0.492793 8_4:-7858614 None:intergenic
CAGTCTGTGGTTGTTATAGT+GGG 0.495335 8_4:-7860323 None:intergenic
ATTTGAACTAGAAAGAACTT+AGG 0.496696 8_4:-7862329 None:intergenic
ATCGAAGAAACGGGTTCCAC+TGG 0.499423 8_4:+7859636 Msa1311180:CDS
GAAAAGAAGCGAAAGCAATA+GGG 0.499997 8_4:+7860496 Msa1311180:CDS
CATTGTAGGAAATTATTTCA+GGG 0.505321 8_4:-7861150 None:intergenic
GTATCCATTATCGAAGAAAC+GGG 0.505875 8_4:+7859627 Msa1311180:CDS
CGAAAGCAATAGGGAAGCGC+TGG 0.509479 8_4:+7860505 Msa1311180:CDS
AAGAGTGGTGGTGGGCGGAT+GGG 0.514530 8_4:+7858547 Msa1311180:CDS
TATAGGACAAAGAGTGGTGG+TGG 0.516759 8_4:+7858538 Msa1311180:CDS
GTATGGCAGAATTACTGAGT+TGG 0.524678 8_4:+7861958 Msa1311180:intron
GGAACCTGTATATTAGTTGA+AGG 0.526607 8_4:+7859514 Msa1311180:CDS
TCCATTATATTACGAATCAA+AGG 0.529018 8_4:-7858686 None:intergenic
ATTTGATCTTGTTGTCCCAA+AGG 0.537738 8_4:+7861593 Msa1311180:CDS
ATAATATTCGGTTCAAAACA+TGG 0.545800 8_4:+7858364 Msa1311180:exon
GTTCAAGTACCTCTGTGAGC+GGG 0.546364 8_4:+7861036 Msa1311180:CDS
ACACATGACACGTCTTTCAC+CGG 0.549787 8_4:-7858641 None:intergenic
CACCGGCGTTATATCATCGT+CGG 0.553730 8_4:-7858624 None:intergenic
GAATTGGGTTCTACTGAACC+GGG 0.555450 8_4:-7858422 None:intergenic
AATTTCTGGCAGCCAAAATG+AGG 0.559288 8_4:+7861698 Msa1311180:CDS
CTAGAACGACCAGCAACTGA+AGG 0.560158 8_4:+7859541 Msa1311180:CDS
AGGTTCCGGTAGGCAAAAGA+AGG 0.561095 8_4:-7859498 None:intergenic
GATTCACTGTAGTTGTAACC+TGG 0.561688 8_4:-7860367 None:intergenic
GCCTAATCCTTCGCAGTCTG+TGG 0.565890 8_4:-7860336 None:intergenic
GACTCACTTCAGATCACCTA+AGG 0.569954 8_4:+7861361 Msa1311180:CDS
AGTACAATTTATGAGAATGA+AGG 0.570053 8_4:+7860413 Msa1311180:CDS
ATTGTAGGAAATTATTTCAG+GGG 0.574362 8_4:-7861149 None:intergenic
GTTTATCTACTTATCACCGA+TGG 0.574883 8_4:+7858794 Msa1311180:CDS
AGATCTTTGTCTAAATGGAA+CGG 0.576506 8_4:+7862012 Msa1311180:CDS
CCGGTAGGCAAAAGAAGGCT+AGG 0.577333 8_4:-7859493 None:intergenic
CTAAACATGTTGCAGAAATG+TGG 0.578192 8_4:+7860765 Msa1311180:CDS
TCATCGTCGGCCGTCAATGG+CGG 0.584257 8_4:-7858611 None:intergenic
AGTGAATCAGAAAGCTGTCA+AGG 0.586394 8_4:+7860382 Msa1311180:CDS
ATGGAACGGTTAAGCGATCA+GGG 0.587701 8_4:+7862026 Msa1311180:CDS
GTGTTGGAAGAGAATTGAAG+AGG 0.588315 8_4:-7858272 None:intergenic
TGTTAGCCTTGAAATTGTGA+AGG 0.588593 8_4:+7860436 Msa1311180:CDS
TGCAGAAATGTGGATGGTTG+AGG 0.588946 8_4:+7860775 Msa1311180:CDS
TGTTCAAGTACCTCTGTGAG+CGG 0.591636 8_4:+7861035 Msa1311180:CDS
TGCCGCGAGAGAAGTATGAA+TGG 0.591892 8_4:+7861984 Msa1311180:CDS
GCTGACAAAGTTCTTCACAT+TGG 0.591894 8_4:+7859586 Msa1311180:CDS
TATAAACTCCGAACCGCCGT+CGG 0.592176 8_4:-7858519 None:intergenic
TCTTGCCATAAAGATTGGAA+TGG 0.603493 8_4:-7862197 None:intergenic
AAAATGCAAACCCAAGAACC+CGG 0.606260 8_4:+7858404 Msa1311180:CDS
CACATTGGGACAGTAGACAT+TGG 0.609792 8_4:+7859601 Msa1311180:CDS
AAATCTCTTAATGCATCCAG+TGG 0.611833 8_4:-7859652 None:intergenic
ACTAGAAAGAACTTAGGATG+AGG 0.612358 8_4:-7862323 None:intergenic
CTGGCAGCCAAAATGAGGAG+CGG 0.630568 8_4:+7861703 Msa1311180:CDS
CGTGGCAACAGATGAACCAT+CGG 0.631853 8_4:-7858810 None:intergenic
TACCATTCATACTTCTCTCG+CGG 0.633539 8_4:-7861986 None:intergenic
CGGATGGGTGAAGTCATCCA+AGG 0.633680 8_4:+7858562 Msa1311180:CDS
GGAGTTTATAGGACAAAGAG+TGG 0.634196 8_4:+7858532 Msa1311180:CDS
GGACAAAGAGTGGTGGTGGG+CGG 0.641046 8_4:+7858542 Msa1311180:CDS
ATAACAACCACAGACTGCGA+AGG 0.649224 8_4:+7860329 Msa1311180:CDS
TTTCTAGACCGAACCGACGG+CGG 0.653294 8_4:+7858506 Msa1311180:CDS
TAGAACGACCAGCAACTGAA+GGG 0.655092 8_4:+7859542 Msa1311180:CDS
GGCCGACGATGATATAACGC+CGG 0.660439 8_4:+7858622 Msa1311180:CDS
ACATGTTGCAGAAATGTGGA+TGG 0.663378 8_4:+7860769 Msa1311180:CDS
ATAGGACAAAGAGTGGTGGT+GGG 0.664940 8_4:+7858539 Msa1311180:CDS
GGTGAAAGACGTGTCATGTG+TGG 0.666056 8_4:+7858643 Msa1311180:CDS
GGCTTACTGTGATAAACTCG+AGG 0.673018 8_4:+7861724 Msa1311180:CDS
GGTGATAAGTAGATAAACGG+TGG 0.674884 8_4:-7858789 None:intergenic
GACATTCAAGTTGTTCTCGG+AGG 0.683600 8_4:+7862164 Msa1311180:three_prime_UTR
ACTAATATACAGGTTCCGGT+AGG 0.684364 8_4:-7859508 None:intergenic
GTTTATAGGACAAAGAGTGG+TGG 0.701939 8_4:+7858535 Msa1311180:CDS
TAAACGGTGGAAGATTTGGG+AGG 0.703695 8_4:-7858776 None:intergenic
GAAAACACGAACCTGAAGCG+TGG 0.704478 8_4:-7858828 None:intergenic
TTTCCAAAACCCGCTCACAG+AGG 0.751415 8_4:-7861045 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATAAAATTACTTGA+TGG - chr8_4:7859160-7859179 None:intergenic 10.0%
!! GATTTATATAAACAAATAAT+TGG + chr8_4:7861807-7861826 Msa1311180:intron 10.0%
!! TAAAATATAAAATTACTTGA+TGG - chr8_4:7859160-7859179 None:intergenic 10.0%
!! GATTTATATAAACAAATAAT+TGG + chr8_4:7861807-7861826 Msa1311180:intron 10.0%
!!! TCACTTTTACTTATAATATT+CGG + chr8_4:7858352-7858371 Msa1311180:five_prime_UTR 15.0%
!! CTAATTATTTAAGAATGTTT+GGG - chr8_4:7859129-7859148 None:intergenic 15.0%
!! ACTAATTATTTAAGAATGTT+TGG - chr8_4:7859130-7859149 None:intergenic 15.0%
!! TTCTTAAATAATTAGTAACT+TGG + chr8_4:7859134-7859153 Msa1311180:intron 15.0%
!! TGTCATACTTTAATATATAT+TGG - chr8_4:7859361-7859380 None:intergenic 15.0%
!!! AATGTAATATGATATTTTGT+AGG + chr8_4:7859444-7859463 Msa1311180:intron 15.0%
!! ATGGCTATAAATAAAAATAT+GGG - chr8_4:7859864-7859883 None:intergenic 15.0%
!! AATGGCTATAAATAAAAATA+TGG - chr8_4:7859865-7859884 None:intergenic 15.0%
!! TAAAAAATGATTCTGAATAT+CGG + chr8_4:7859933-7859952 Msa1311180:intron 15.0%
!! ATATTTATATATGAAGAACA+AGG - chr8_4:7859990-7860009 None:intergenic 15.0%
!! AATATGATAGGAAAATAAAT+AGG - chr8_4:7860078-7860097 None:intergenic 15.0%
!! ATATTATTGAGAAATATGAT+AGG - chr8_4:7860090-7860109 None:intergenic 15.0%
!! TATCATATTTCTCAATAATA+TGG + chr8_4:7860089-7860108 Msa1311180:intron 15.0%
!! ATAAAAATAATAACATAGCA+AGG - chr8_4:7860190-7860209 None:intergenic 15.0%
!! ATAACAATAAGTAATAAAAG+TGG - chr8_4:7861452-7861471 None:intergenic 15.0%
!! ATTTGTTTATATAAATCAGA+GGG - chr8_4:7861804-7861823 None:intergenic 15.0%
!! TATTTGTTTATATAAATCAG+AGG - chr8_4:7861805-7861824 None:intergenic 15.0%
!!! TCACTTTTACTTATAATATT+CGG + chr8_4:7858352-7858371 Msa1311180:five_prime_UTR 15.0%
!! CTAATTATTTAAGAATGTTT+GGG - chr8_4:7859129-7859148 None:intergenic 15.0%
!! ACTAATTATTTAAGAATGTT+TGG - chr8_4:7859130-7859149 None:intergenic 15.0%
!! TTCTTAAATAATTAGTAACT+TGG + chr8_4:7859134-7859153 Msa1311180:intron 15.0%
!! TGTCATACTTTAATATATAT+TGG - chr8_4:7859361-7859380 None:intergenic 15.0%
!!! AATGTAATATGATATTTTGT+AGG + chr8_4:7859444-7859463 Msa1311180:intron 15.0%
!! ATGGCTATAAATAAAAATAT+GGG - chr8_4:7859864-7859883 None:intergenic 15.0%
!! AATGGCTATAAATAAAAATA+TGG - chr8_4:7859865-7859884 None:intergenic 15.0%
!! TAAAAAATGATTCTGAATAT+CGG + chr8_4:7859933-7859952 Msa1311180:intron 15.0%
!! ATATTTATATATGAAGAACA+AGG - chr8_4:7859990-7860009 None:intergenic 15.0%
!! AATATGATAGGAAAATAAAT+AGG - chr8_4:7860078-7860097 None:intergenic 15.0%
!! ATATTATTGAGAAATATGAT+AGG - chr8_4:7860090-7860109 None:intergenic 15.0%
!! TATCATATTTCTCAATAATA+TGG + chr8_4:7860089-7860108 Msa1311180:intron 15.0%
!! ATAAAAATAATAACATAGCA+AGG - chr8_4:7860190-7860209 None:intergenic 15.0%
!! ATAACAATAAGTAATAAAAG+TGG - chr8_4:7861452-7861471 None:intergenic 15.0%
!! ATTTGTTTATATAAATCAGA+GGG - chr8_4:7861804-7861823 None:intergenic 15.0%
!! TATTTGTTTATATAAATCAG+AGG - chr8_4:7861805-7861824 None:intergenic 15.0%
!! GAAAACAACTTATAACTTAT+AGG - chr8_4:7858884-7858903 None:intergenic 20.0%
!!! TTGTTTTCAAAATCTATTCT+GGG + chr8_4:7858896-7858915 Msa1311180:intron 20.0%
!! ACAAAGTTAATAATCATTAC+AGG - chr8_4:7859261-7859280 None:intergenic 20.0%
!! TGGCTATAAATAAAAATATG+GGG - chr8_4:7859863-7859882 None:intergenic 20.0%
!!! TATTTTTATTAAGTGATGCT+TGG + chr8_4:7860201-7860220 Msa1311180:intron 20.0%
!! ATATTTCTTATAATCGTTTC+AGG + chr8_4:7861665-7861684 Msa1311180:intron 20.0%
!! AGAAGAAAATAATGAACTAA+GGG - chr8_4:7861767-7861786 None:intergenic 20.0%
!! AAGAAGAAAATAATGAACTA+AGG - chr8_4:7861768-7861787 None:intergenic 20.0%
!!! GATTTATTGATATTTTACCA+AGG - chr8_4:7861920-7861939 None:intergenic 20.0%
!!! GCCAACAATTAATTATATTT+TGG + chr8_4:7862139-7862158 Msa1311180:exon 20.0%
!! GCCAAAATATAATTAATTGT+TGG - chr8_4:7862143-7862162 None:intergenic 20.0%
!! ACAATGTATAACTGTATATA+AGG + chr8_4:7862271-7862290 Msa1311180:three_prime_UTR 20.0%
!! GAAAACAACTTATAACTTAT+AGG - chr8_4:7858884-7858903 None:intergenic 20.0%
!!! TTGTTTTCAAAATCTATTCT+GGG + chr8_4:7858896-7858915 Msa1311180:intron 20.0%
!! ACAAAGTTAATAATCATTAC+AGG - chr8_4:7859261-7859280 None:intergenic 20.0%
!! TGGCTATAAATAAAAATATG+GGG - chr8_4:7859863-7859882 None:intergenic 20.0%
!!! TATTTTTATTAAGTGATGCT+TGG + chr8_4:7860201-7860220 Msa1311180:intron 20.0%
!! ATATTTCTTATAATCGTTTC+AGG + chr8_4:7861665-7861684 Msa1311180:intron 20.0%
!! AGAAGAAAATAATGAACTAA+GGG - chr8_4:7861767-7861786 None:intergenic 20.0%
!! AAGAAGAAAATAATGAACTA+AGG - chr8_4:7861768-7861787 None:intergenic 20.0%
!!! GATTTATTGATATTTTACCA+AGG - chr8_4:7861920-7861939 None:intergenic 20.0%
!!! GCCAACAATTAATTATATTT+TGG + chr8_4:7862139-7862158 Msa1311180:exon 20.0%
!! GCCAAAATATAATTAATTGT+TGG - chr8_4:7862143-7862162 None:intergenic 20.0%
!! ACAATGTATAACTGTATATA+AGG + chr8_4:7862271-7862290 Msa1311180:three_prime_UTR 20.0%
! ATAATATTCGGTTCAAAACA+TGG + chr8_4:7858364-7858383 Msa1311180:exon 25.0%
!!! AAAGTGTTTTTAATTGAACC+CGG - chr8_4:7858487-7858506 None:intergenic 25.0%
!! TCCTTTGATTCGTAATATAA+TGG + chr8_4:7858685-7858704 Msa1311180:CDS 25.0%
! TCCATTATATTACGAATCAA+AGG - chr8_4:7858689-7858708 None:intergenic 25.0%
!!! CGTAATATAATGGAAGTTTT+AGG + chr8_4:7858695-7858714 Msa1311180:CDS 25.0%
!!! AATATAATGGAAGTTTTAGG+TGG + chr8_4:7858698-7858717 Msa1311180:CDS 25.0%
!!! GTTGTTTTCAAAATCTATTC+TGG + chr8_4:7858895-7858914 Msa1311180:intron 25.0%
!! TGTTTTCAAAATCTATTCTG+GGG + chr8_4:7858897-7858916 Msa1311180:intron 25.0%
! AAGCTTGTCAAAATAACTTA+TGG - chr8_4:7859046-7859065 None:intergenic 25.0%
!!! AAGTTATTTTGACAAGCTTA+TGG + chr8_4:7859047-7859066 Msa1311180:intron 25.0%
! AATTGTTTATTGTCATGTCA+TGG + chr8_4:7859085-7859104 Msa1311180:intron 25.0%
! ATTGTTTATTGTCATGTCAT+GGG + chr8_4:7859086-7859105 Msa1311180:intron 25.0%
!! ATATGATATTTTGTAGGTTG+TGG + chr8_4:7859450-7859469 Msa1311180:intron 25.0%
!! TAAGAGATTTTTCCCATTTT+CGG + chr8_4:7859665-7859684 Msa1311180:CDS 25.0%
! ATAATAAGATATAGCGAATG+AGG - chr8_4:7859733-7859752 None:intergenic 25.0%
! TAAATAAAAATATGGGGGTA+AGG - chr8_4:7859857-7859876 None:intergenic 25.0%
! GGCTATAAATAAAAATATGG+GGG - chr8_4:7859862-7859881 None:intergenic 25.0%
! TTCTGAATATCGGTAAAATT+TGG + chr8_4:7859943-7859962 Msa1311180:intron 25.0%
!!! CTTGTCATTTATTTTTTGAC+AGG + chr8_4:7860135-7860154 Msa1311180:intron 25.0%
! AGTACAATTTATGAGAATGA+AGG + chr8_4:7860413-7860432 Msa1311180:CDS 25.0%
! AGTGAGAGAAAAGAAAAAAT+TGG + chr8_4:7860580-7860599 Msa1311180:CDS 25.0%
! GTGAGAGAAAAGAAAAAATT+GGG + chr8_4:7860581-7860600 Msa1311180:CDS 25.0%
! AAAATTGGGAACTTCATTAA+AGG + chr8_4:7860595-7860614 Msa1311180:CDS 25.0%
! GACAAATTCTTTCTTCTATT+CGG + chr8_4:7860929-7860948 Msa1311180:intron 25.0%
! ATGTACATTGTTATACTTAC+AGG + chr8_4:7860988-7861007 Msa1311180:intron 25.0%
! ATTGTAGGAAATTATTTCAG+GGG - chr8_4:7861152-7861171 None:intergenic 25.0%
! CATTGTAGGAAATTATTTCA+GGG - chr8_4:7861153-7861172 None:intergenic 25.0%
! TCATTGTAGGAAATTATTTC+AGG - chr8_4:7861154-7861173 None:intergenic 25.0%
! ATATTTATCACCAAATGTTG+TGG + chr8_4:7861202-7861221 Msa1311180:intron 25.0%
!! TTTGAGATGAAAAGTAAATG+AGG - chr8_4:7861253-7861272 None:intergenic 25.0%
! TATTTGTTTGTTCATGTTAC+TGG + chr8_4:7861283-7861302 Msa1311180:intron 25.0%
!!! TATAACTGGTTTTTTGTAGA+TGG - chr8_4:7861505-7861524 None:intergenic 25.0%
!!! AATCATGTGTTTGCTTTTAA+AGG - chr8_4:7861837-7861856 None:intergenic 25.0%
!!! GATTTTGTTTATGTACTGTA+TGG + chr8_4:7861941-7861960 Msa1311180:intron 25.0%
! TACTTAGATCTTTGTCTAAA+TGG + chr8_4:7862007-7862026 Msa1311180:CDS 25.0%
! ATAATATTCGGTTCAAAACA+TGG + chr8_4:7858364-7858383 Msa1311180:exon 25.0%
!!! AAAGTGTTTTTAATTGAACC+CGG - chr8_4:7858487-7858506 None:intergenic 25.0%
!! TCCTTTGATTCGTAATATAA+TGG + chr8_4:7858685-7858704 Msa1311180:CDS 25.0%
! TCCATTATATTACGAATCAA+AGG - chr8_4:7858689-7858708 None:intergenic 25.0%
!!! CGTAATATAATGGAAGTTTT+AGG + chr8_4:7858695-7858714 Msa1311180:CDS 25.0%
!!! AATATAATGGAAGTTTTAGG+TGG + chr8_4:7858698-7858717 Msa1311180:CDS 25.0%
!!! GTTGTTTTCAAAATCTATTC+TGG + chr8_4:7858895-7858914 Msa1311180:intron 25.0%
!! TGTTTTCAAAATCTATTCTG+GGG + chr8_4:7858897-7858916 Msa1311180:intron 25.0%
! AAGCTTGTCAAAATAACTTA+TGG - chr8_4:7859046-7859065 None:intergenic 25.0%
!!! AAGTTATTTTGACAAGCTTA+TGG + chr8_4:7859047-7859066 Msa1311180:intron 25.0%
! AATTGTTTATTGTCATGTCA+TGG + chr8_4:7859085-7859104 Msa1311180:intron 25.0%
! ATTGTTTATTGTCATGTCAT+GGG + chr8_4:7859086-7859105 Msa1311180:intron 25.0%
!! ATATGATATTTTGTAGGTTG+TGG + chr8_4:7859450-7859469 Msa1311180:intron 25.0%
!! TAAGAGATTTTTCCCATTTT+CGG + chr8_4:7859665-7859684 Msa1311180:CDS 25.0%
! ATAATAAGATATAGCGAATG+AGG - chr8_4:7859733-7859752 None:intergenic 25.0%
! TAAATAAAAATATGGGGGTA+AGG - chr8_4:7859857-7859876 None:intergenic 25.0%
! GGCTATAAATAAAAATATGG+GGG - chr8_4:7859862-7859881 None:intergenic 25.0%
! TTCTGAATATCGGTAAAATT+TGG + chr8_4:7859943-7859962 Msa1311180:intron 25.0%
!!! CTTGTCATTTATTTTTTGAC+AGG + chr8_4:7860135-7860154 Msa1311180:intron 25.0%
! AGTACAATTTATGAGAATGA+AGG + chr8_4:7860413-7860432 Msa1311180:CDS 25.0%
! AGTGAGAGAAAAGAAAAAAT+TGG + chr8_4:7860580-7860599 Msa1311180:CDS 25.0%
! GTGAGAGAAAAGAAAAAATT+GGG + chr8_4:7860581-7860600 Msa1311180:CDS 25.0%
! AAAATTGGGAACTTCATTAA+AGG + chr8_4:7860595-7860614 Msa1311180:CDS 25.0%
! GACAAATTCTTTCTTCTATT+CGG + chr8_4:7860929-7860948 Msa1311180:intron 25.0%
! ATGTACATTGTTATACTTAC+AGG + chr8_4:7860988-7861007 Msa1311180:intron 25.0%
! ATTGTAGGAAATTATTTCAG+GGG - chr8_4:7861152-7861171 None:intergenic 25.0%
! CATTGTAGGAAATTATTTCA+GGG - chr8_4:7861153-7861172 None:intergenic 25.0%
! TCATTGTAGGAAATTATTTC+AGG - chr8_4:7861154-7861173 None:intergenic 25.0%
! ATATTTATCACCAAATGTTG+TGG + chr8_4:7861202-7861221 Msa1311180:intron 25.0%
!! TTTGAGATGAAAAGTAAATG+AGG - chr8_4:7861253-7861272 None:intergenic 25.0%
! TATTTGTTTGTTCATGTTAC+TGG + chr8_4:7861283-7861302 Msa1311180:intron 25.0%
!!! TATAACTGGTTTTTTGTAGA+TGG - chr8_4:7861505-7861524 None:intergenic 25.0%
!!! AATCATGTGTTTGCTTTTAA+AGG - chr8_4:7861837-7861856 None:intergenic 25.0%
!!! GATTTTGTTTATGTACTGTA+TGG + chr8_4:7861941-7861960 Msa1311180:intron 25.0%
! TACTTAGATCTTTGTCTAAA+TGG + chr8_4:7862007-7862026 Msa1311180:CDS 25.0%
!!! GTTTGTGTTTGTTTTTGTGT+TGG - chr8_4:7858291-7858310 None:intergenic 30.0%
! CTCCTTTTAAATACTCAAAC+CGG + chr8_4:7858465-7858484 Msa1311180:CDS 30.0%
! TCCTTTTAAATACTCAAACC+GGG + chr8_4:7858466-7858485 Msa1311180:CDS 30.0%
ATCGGTGATAAGTAGATAAA+CGG - chr8_4:7858795-7858814 None:intergenic 30.0%
ATAAACATTTGCAAGACTGT+TGG - chr8_4:7858985-7859004 None:intergenic 30.0%
TCAAATAAGTCAATCCAGAT+AGG + chr8_4:7859019-7859038 Msa1311180:intron 30.0%
AAATAACTTATGGACCTATC+TGG - chr8_4:7859036-7859055 None:intergenic 30.0%
TTCAACTAATATACAGGTTC+CGG - chr8_4:7859515-7859534 None:intergenic 30.0%
AGTATCCATTATCGAAGAAA+CGG + chr8_4:7859626-7859645 Msa1311180:CDS 30.0%
! ATTACTGCTTTAACTTCTAG+AGG + chr8_4:7860036-7860055 Msa1311180:intron 30.0%
ATAAATGACAAGCATGCTAT+TGG - chr8_4:7860127-7860146 None:intergenic 30.0%
ATGTTCCTTGAAAAATGAGT+GGG - chr8_4:7860282-7860301 None:intergenic 30.0%
!!! AACTAGTTTGCTTTTCTCTT+TGG - chr8_4:7860468-7860487 None:intergenic 30.0%
TCTGAAGAAAACTAATGAAC+TGG + chr8_4:7860544-7860563 Msa1311180:CDS 30.0%
TTGGGAAGAGAAAAAATCTT+CGG - chr8_4:7860639-7860658 None:intergenic 30.0%
AGAGACAGTCAAATAAGTTT+GGG - chr8_4:7860657-7860676 None:intergenic 30.0%
! AATGGCTTTTGCTGAATTAA+AGG + chr8_4:7860802-7860821 Msa1311180:CDS 30.0%
AAGTCTTGACTAAATAGAGA+TGG - chr8_4:7860887-7860906 None:intergenic 30.0%
ATTCTTTCTTCTATTCGGTT+TGG + chr8_4:7860934-7860953 Msa1311180:intron 30.0%
TTCTTTCTTCTATTCGGTTT+GGG + chr8_4:7860935-7860954 Msa1311180:intron 30.0%
! AACATCTAAAGCTTCATTGT+AGG - chr8_4:7861167-7861186 None:intergenic 30.0%
!! AGCTTTAGATGTTCTTAGAA+AGG + chr8_4:7861174-7861193 Msa1311180:CDS 30.0%
! TCTGAAACAAAGTTTGATTC+AGG + chr8_4:7861333-7861352 Msa1311180:CDS 30.0%
ATAAGTAATAAAAGTGGCGA+AGG - chr8_4:7861446-7861465 None:intergenic 30.0%
GGATAACTGTGAATTATAAC+TGG - chr8_4:7861519-7861538 None:intergenic 30.0%
! TAGAATGGTTTAGCTTCTTT+CGG - chr8_4:7861540-7861559 None:intergenic 30.0%
TCATTAACTCGAACATAGAA+TGG - chr8_4:7861555-7861574 None:intergenic 30.0%
TCTTACACATAGTACTACAA+TGG - chr8_4:7861637-7861656 None:intergenic 30.0%
! TTCTTATAATCGTTTCAGGT+TGG + chr8_4:7861669-7861688 Msa1311180:intron 30.0%
AACAGGCATATTTAACAGTT+CGG - chr8_4:7861896-7861915 None:intergenic 30.0%
! TGATATTTTACCAAGGAAAC+AGG - chr8_4:7861913-7861932 None:intergenic 30.0%
AGATCTTTGTCTAAATGGAA+CGG + chr8_4:7862012-7862031 Msa1311180:CDS 30.0%
TATTGCCATTCCAATCTTTA+TGG + chr8_4:7862192-7862211 Msa1311180:three_prime_UTR 30.0%
TTACATCTTGCCATAAAGAT+TGG - chr8_4:7862205-7862224 None:intergenic 30.0%
!!! GTTTGTGTTTGTTTTTGTGT+TGG - chr8_4:7858291-7858310 None:intergenic 30.0%
! CTCCTTTTAAATACTCAAAC+CGG + chr8_4:7858465-7858484 Msa1311180:CDS 30.0%
! TCCTTTTAAATACTCAAACC+GGG + chr8_4:7858466-7858485 Msa1311180:CDS 30.0%
ATCGGTGATAAGTAGATAAA+CGG - chr8_4:7858795-7858814 None:intergenic 30.0%
ATAAACATTTGCAAGACTGT+TGG - chr8_4:7858985-7859004 None:intergenic 30.0%
TCAAATAAGTCAATCCAGAT+AGG + chr8_4:7859019-7859038 Msa1311180:intron 30.0%
AAATAACTTATGGACCTATC+TGG - chr8_4:7859036-7859055 None:intergenic 30.0%
TTCAACTAATATACAGGTTC+CGG - chr8_4:7859515-7859534 None:intergenic 30.0%
AGTATCCATTATCGAAGAAA+CGG + chr8_4:7859626-7859645 Msa1311180:CDS 30.0%
! ATTACTGCTTTAACTTCTAG+AGG + chr8_4:7860036-7860055 Msa1311180:intron 30.0%
ATAAATGACAAGCATGCTAT+TGG - chr8_4:7860127-7860146 None:intergenic 30.0%
ATGTTCCTTGAAAAATGAGT+GGG - chr8_4:7860282-7860301 None:intergenic 30.0%
!!! AACTAGTTTGCTTTTCTCTT+TGG - chr8_4:7860468-7860487 None:intergenic 30.0%
TCTGAAGAAAACTAATGAAC+TGG + chr8_4:7860544-7860563 Msa1311180:CDS 30.0%
TTGGGAAGAGAAAAAATCTT+CGG - chr8_4:7860639-7860658 None:intergenic 30.0%
AGAGACAGTCAAATAAGTTT+GGG - chr8_4:7860657-7860676 None:intergenic 30.0%
! AATGGCTTTTGCTGAATTAA+AGG + chr8_4:7860802-7860821 Msa1311180:CDS 30.0%
AAGTCTTGACTAAATAGAGA+TGG - chr8_4:7860887-7860906 None:intergenic 30.0%
ATTCTTTCTTCTATTCGGTT+TGG + chr8_4:7860934-7860953 Msa1311180:intron 30.0%
TTCTTTCTTCTATTCGGTTT+GGG + chr8_4:7860935-7860954 Msa1311180:intron 30.0%
! AACATCTAAAGCTTCATTGT+AGG - chr8_4:7861167-7861186 None:intergenic 30.0%
!! AGCTTTAGATGTTCTTAGAA+AGG + chr8_4:7861174-7861193 Msa1311180:CDS 30.0%
! TCTGAAACAAAGTTTGATTC+AGG + chr8_4:7861333-7861352 Msa1311180:CDS 30.0%
ATAAGTAATAAAAGTGGCGA+AGG - chr8_4:7861446-7861465 None:intergenic 30.0%
GGATAACTGTGAATTATAAC+TGG - chr8_4:7861519-7861538 None:intergenic 30.0%
! TAGAATGGTTTAGCTTCTTT+CGG - chr8_4:7861540-7861559 None:intergenic 30.0%
TCATTAACTCGAACATAGAA+TGG - chr8_4:7861555-7861574 None:intergenic 30.0%
TCTTACACATAGTACTACAA+TGG - chr8_4:7861637-7861656 None:intergenic 30.0%
! TTCTTATAATCGTTTCAGGT+TGG + chr8_4:7861669-7861688 Msa1311180:intron 30.0%
AACAGGCATATTTAACAGTT+CGG - chr8_4:7861896-7861915 None:intergenic 30.0%
! TGATATTTTACCAAGGAAAC+AGG - chr8_4:7861913-7861932 None:intergenic 30.0%
AGATCTTTGTCTAAATGGAA+CGG + chr8_4:7862012-7862031 Msa1311180:CDS 30.0%
TATTGCCATTCCAATCTTTA+TGG + chr8_4:7862192-7862211 Msa1311180:three_prime_UTR 30.0%
TTACATCTTGCCATAAAGAT+TGG - chr8_4:7862205-7862224 None:intergenic 30.0%
! ACCCGGTTTGAGTATTTAAA+AGG - chr8_4:7858470-7858489 None:intergenic 35.0%
ATTACGAATCAAAGGAATCC+TGG - chr8_4:7858681-7858700 None:intergenic 35.0%
AGATAAACGGTGGAAGATTT+GGG - chr8_4:7858782-7858801 None:intergenic 35.0%
TAGATAAACGGTGGAAGATT+TGG - chr8_4:7858783-7858802 None:intergenic 35.0%
GTTTATCTACTTATCACCGA+TGG + chr8_4:7858794-7858813 Msa1311180:CDS 35.0%
! TGATATTTTGTAGGTTGTGG+TGG + chr8_4:7859453-7859472 Msa1311180:intron 35.0%
GGAACCTGTATATTAGTTGA+AGG + chr8_4:7859514-7859533 Msa1311180:CDS 35.0%
CAGACCTTCAACTAATATAC+AGG - chr8_4:7859521-7859540 None:intergenic 35.0%
GAAACACGCTATTCAGTTAA+AGG + chr8_4:7859564-7859583 Msa1311180:CDS 35.0%
CTGACAAAGTTCTTCACATT+GGG + chr8_4:7859587-7859606 Msa1311180:CDS 35.0%
GTATCCATTATCGAAGAAAC+GGG + chr8_4:7859627-7859646 Msa1311180:CDS 35.0%
AAATCTCTTAATGCATCCAG+TGG - chr8_4:7859655-7859674 None:intergenic 35.0%
!! TGTAAACCATGAAAGCATTC+AGG - chr8_4:7859774-7859793 None:intergenic 35.0%
AGAACAGAAACATGAAAACG+TGG - chr8_4:7859821-7859840 None:intergenic 35.0%
! TGCTTTAACTTCTAGAGGAA+GGG + chr8_4:7860041-7860060 Msa1311180:intron 35.0%
TGATGCTTGGCTCATATATT+AGG + chr8_4:7860214-7860233 Msa1311180:intron 35.0%
CATGTTCCTTGAAAAATGAG+TGG - chr8_4:7860283-7860302 None:intergenic 35.0%
!! TGTTAGCCTTGAAATTGTGA+AGG + chr8_4:7860436-7860455 Msa1311180:CDS 35.0%
TGAAAAGAAGCGAAAGCAAT+AGG + chr8_4:7860495-7860514 Msa1311180:CDS 35.0%
GAAAAGAAGCGAAAGCAATA+GGG + chr8_4:7860496-7860515 Msa1311180:CDS 35.0%
TAATGAACTGGCATCACAAT+TGG + chr8_4:7860556-7860575 Msa1311180:CDS 35.0%
CAGAGACAGTCAAATAAGTT+TGG - chr8_4:7860658-7860677 None:intergenic 35.0%
CAAACTTATTTGACTGTCTC+TGG + chr8_4:7860656-7860675 Msa1311180:CDS 35.0%
CTTGGAAATGTGTATTCGTT+TGG + chr8_4:7860710-7860729 Msa1311180:CDS 35.0%
! GTTTTATCTGCGTGAAATCT+AGG - chr8_4:7860737-7860756 None:intergenic 35.0%
CTAAACATGTTGCAGAAATG+TGG + chr8_4:7860765-7860784 Msa1311180:CDS 35.0%
! GCAAGTATGGTCAATTCTTT+TGG - chr8_4:7861098-7861117 None:intergenic 35.0%
CGGATATATTCCACAACATT+TGG - chr8_4:7861215-7861234 None:intergenic 35.0%
TGAGGTGGCAAAAATCAAAA+CGG - chr8_4:7861235-7861254 None:intergenic 35.0%
GAGATGAAAAGTAAATGAGG+TGG - chr8_4:7861250-7861269 None:intergenic 35.0%
TTTCTTATCTTCAGCCTATG+AGG - chr8_4:7861313-7861332 None:intergenic 35.0%
GGATAATATCGACATACCTT+AGG - chr8_4:7861380-7861399 None:intergenic 35.0%
TCGATATTATCCTCATGTTC+TGG + chr8_4:7861388-7861407 Msa1311180:intron 35.0%
ATCAACAAATCCAGAACATG+AGG - chr8_4:7861401-7861420 None:intergenic 35.0%
! ATTTGATCTTGTTGTCCCAA+AGG + chr8_4:7861593-7861612 Msa1311180:CDS 35.0%
! CAGGTTGGAACTATAATTTC+TGG + chr8_4:7861684-7861703 Msa1311180:intron 35.0%
GTTAAATATGCCTGTTTCCT+TGG + chr8_4:7861900-7861919 Msa1311180:intron 35.0%
TATGGCAGAATTACTGAGTT+GGG + chr8_4:7861959-7861978 Msa1311180:intron 35.0%
CAGTTGTAAAAAGGACCATA+AGG - chr8_4:7862069-7862088 None:intergenic 35.0%
! CTTATGGTCCTTTTTACAAC+TGG + chr8_4:7862067-7862086 Msa1311180:CDS 35.0%
TGCTAAGTCCAGTTGTAAAA+AGG - chr8_4:7862078-7862097 None:intergenic 35.0%
AACTGGACTTAGCAATGTTA+GGG + chr8_4:7862084-7862103 Msa1311180:CDS 35.0%
TTGTCATAGCTTCTTGGAAA+AGG - chr8_4:7862118-7862137 None:intergenic 35.0%
! TTTTCCAAGAAGCTATGACA+AGG + chr8_4:7862117-7862136 Msa1311180:CDS 35.0%
TCTTGCCATAAAGATTGGAA+TGG - chr8_4:7862200-7862219 None:intergenic 35.0%
ACTAGAAAGAACTTAGGATG+AGG - chr8_4:7862326-7862345 None:intergenic 35.0%
! ACCCGGTTTGAGTATTTAAA+AGG - chr8_4:7858470-7858489 None:intergenic 35.0%
ATTACGAATCAAAGGAATCC+TGG - chr8_4:7858681-7858700 None:intergenic 35.0%
AGATAAACGGTGGAAGATTT+GGG - chr8_4:7858782-7858801 None:intergenic 35.0%
TAGATAAACGGTGGAAGATT+TGG - chr8_4:7858783-7858802 None:intergenic 35.0%
GTTTATCTACTTATCACCGA+TGG + chr8_4:7858794-7858813 Msa1311180:CDS 35.0%
! TGATATTTTGTAGGTTGTGG+TGG + chr8_4:7859453-7859472 Msa1311180:intron 35.0%
GGAACCTGTATATTAGTTGA+AGG + chr8_4:7859514-7859533 Msa1311180:CDS 35.0%
CAGACCTTCAACTAATATAC+AGG - chr8_4:7859521-7859540 None:intergenic 35.0%
GAAACACGCTATTCAGTTAA+AGG + chr8_4:7859564-7859583 Msa1311180:CDS 35.0%
CTGACAAAGTTCTTCACATT+GGG + chr8_4:7859587-7859606 Msa1311180:CDS 35.0%
GTATCCATTATCGAAGAAAC+GGG + chr8_4:7859627-7859646 Msa1311180:CDS 35.0%
AAATCTCTTAATGCATCCAG+TGG - chr8_4:7859655-7859674 None:intergenic 35.0%
!! TGTAAACCATGAAAGCATTC+AGG - chr8_4:7859774-7859793 None:intergenic 35.0%
AGAACAGAAACATGAAAACG+TGG - chr8_4:7859821-7859840 None:intergenic 35.0%
! TGCTTTAACTTCTAGAGGAA+GGG + chr8_4:7860041-7860060 Msa1311180:intron 35.0%
TGATGCTTGGCTCATATATT+AGG + chr8_4:7860214-7860233 Msa1311180:intron 35.0%
CATGTTCCTTGAAAAATGAG+TGG - chr8_4:7860283-7860302 None:intergenic 35.0%
!! TGTTAGCCTTGAAATTGTGA+AGG + chr8_4:7860436-7860455 Msa1311180:CDS 35.0%
TGAAAAGAAGCGAAAGCAAT+AGG + chr8_4:7860495-7860514 Msa1311180:CDS 35.0%
GAAAAGAAGCGAAAGCAATA+GGG + chr8_4:7860496-7860515 Msa1311180:CDS 35.0%
TAATGAACTGGCATCACAAT+TGG + chr8_4:7860556-7860575 Msa1311180:CDS 35.0%
CAGAGACAGTCAAATAAGTT+TGG - chr8_4:7860658-7860677 None:intergenic 35.0%
CAAACTTATTTGACTGTCTC+TGG + chr8_4:7860656-7860675 Msa1311180:CDS 35.0%
CTTGGAAATGTGTATTCGTT+TGG + chr8_4:7860710-7860729 Msa1311180:CDS 35.0%
! GTTTTATCTGCGTGAAATCT+AGG - chr8_4:7860737-7860756 None:intergenic 35.0%
CTAAACATGTTGCAGAAATG+TGG + chr8_4:7860765-7860784 Msa1311180:CDS 35.0%
! GCAAGTATGGTCAATTCTTT+TGG - chr8_4:7861098-7861117 None:intergenic 35.0%
CGGATATATTCCACAACATT+TGG - chr8_4:7861215-7861234 None:intergenic 35.0%
TGAGGTGGCAAAAATCAAAA+CGG - chr8_4:7861235-7861254 None:intergenic 35.0%
GAGATGAAAAGTAAATGAGG+TGG - chr8_4:7861250-7861269 None:intergenic 35.0%
TTTCTTATCTTCAGCCTATG+AGG - chr8_4:7861313-7861332 None:intergenic 35.0%
GGATAATATCGACATACCTT+AGG - chr8_4:7861380-7861399 None:intergenic 35.0%
TCGATATTATCCTCATGTTC+TGG + chr8_4:7861388-7861407 Msa1311180:intron 35.0%
ATCAACAAATCCAGAACATG+AGG - chr8_4:7861401-7861420 None:intergenic 35.0%
! ATTTGATCTTGTTGTCCCAA+AGG + chr8_4:7861593-7861612 Msa1311180:CDS 35.0%
! CAGGTTGGAACTATAATTTC+TGG + chr8_4:7861684-7861703 Msa1311180:intron 35.0%
GTTAAATATGCCTGTTTCCT+TGG + chr8_4:7861900-7861919 Msa1311180:intron 35.0%
TATGGCAGAATTACTGAGTT+GGG + chr8_4:7861959-7861978 Msa1311180:intron 35.0%
CAGTTGTAAAAAGGACCATA+AGG - chr8_4:7862069-7862088 None:intergenic 35.0%
! CTTATGGTCCTTTTTACAAC+TGG + chr8_4:7862067-7862086 Msa1311180:CDS 35.0%
TGCTAAGTCCAGTTGTAAAA+AGG - chr8_4:7862078-7862097 None:intergenic 35.0%
AACTGGACTTAGCAATGTTA+GGG + chr8_4:7862084-7862103 Msa1311180:CDS 35.0%
TTGTCATAGCTTCTTGGAAA+AGG - chr8_4:7862118-7862137 None:intergenic 35.0%
! TTTTCCAAGAAGCTATGACA+AGG + chr8_4:7862117-7862136 Msa1311180:CDS 35.0%
TCTTGCCATAAAGATTGGAA+TGG - chr8_4:7862200-7862219 None:intergenic 35.0%
ACTAGAAAGAACTTAGGATG+AGG - chr8_4:7862326-7862345 None:intergenic 35.0%
GTGTTGGAAGAGAATTGAAG+AGG - chr8_4:7858275-7858294 None:intergenic 40.0%
!!! CTTGGGTTTGCATTTTGGTT+TGG - chr8_4:7858400-7858419 None:intergenic 40.0%
AAAATGCAAACCCAAGAACC+CGG + chr8_4:7858404-7858423 Msa1311180:CDS 40.0%
AGAATTGGGTTCTACTGAAC+CGG - chr8_4:7858426-7858445 None:intergenic 40.0%
!! AGACTCGAGTGTTGAGAATT+GGG - chr8_4:7858440-7858459 None:intergenic 40.0%
!! AAGACTCGAGTGTTGAGAAT+TGG - chr8_4:7858441-7858460 None:intergenic 40.0%
GGAGTTTATAGGACAAAGAG+TGG + chr8_4:7858532-7858551 Msa1311180:CDS 40.0%
GTTTATAGGACAAAGAGTGG+TGG + chr8_4:7858535-7858554 Msa1311180:CDS 40.0%
AGAAGATTTCTCGACTTCCT+TGG - chr8_4:7858582-7858601 None:intergenic 40.0%
!! GGAGGTAAAGTTCTAGGAAT+AGG - chr8_4:7858761-7858780 None:intergenic 40.0%
GATTTGGGAGGTAAAGTTCT+AGG - chr8_4:7858767-7858786 None:intergenic 40.0%
GGTGATAAGTAGATAAACGG+TGG - chr8_4:7858792-7858811 None:intergenic 40.0%
ACTAATATACAGGTTCCGGT+AGG - chr8_4:7859511-7859530 None:intergenic 40.0%
GCTGACAAAGTTCTTCACAT+TGG + chr8_4:7859586-7859605 Msa1311180:CDS 40.0%
AATTTCACCGTAGTTGTTCG+AGG - chr8_4:7859691-7859710 None:intergenic 40.0%
AAATATGGGGGTAAGGTTAG+AGG - chr8_4:7859850-7859869 None:intergenic 40.0%
!! ATCCTCTAGAATGCTACGAA+TGG - chr8_4:7859883-7859902 None:intergenic 40.0%
! CTGCTTTAACTTCTAGAGGA+AGG + chr8_4:7860040-7860059 Msa1311180:intron 40.0%
AAGCATGCTATTGGATCACA+TGG - chr8_4:7860118-7860137 None:intergenic 40.0%
TGCTTGGCTCATATATTAGG+TGG + chr8_4:7860217-7860236 Msa1311180:intron 40.0%
!! TGCAACCCACTCATTTTTCA+AGG + chr8_4:7860274-7860293 Msa1311180:CDS 40.0%
CAGTCTGTGGTTGTTATAGT+GGG - chr8_4:7860326-7860345 None:intergenic 40.0%
GATTCACTGTAGTTGTAACC+TGG - chr8_4:7860370-7860389 None:intergenic 40.0%
AGTGAATCAGAAAGCTGTCA+AGG + chr8_4:7860382-7860401 Msa1311180:CDS 40.0%
CAGCTTCCTTCACAATTTCA+AGG - chr8_4:7860445-7860464 None:intergenic 40.0%
GGAAGAGAAAAAATCTTCGG+AGG - chr8_4:7860636-7860655 None:intergenic 40.0%
ACATGTTGCAGAAATGTGGA+TGG + chr8_4:7860769-7860788 Msa1311180:CDS 40.0%
!! TTTCTTCTATTCGGTTTGGG+TGG + chr8_4:7860938-7860957 Msa1311180:intron 40.0%
CAAGTCATTAGCACAGTTCA+TGG - chr8_4:7861017-7861036 None:intergenic 40.0%
GAAGACGATCAATGCAAGTA+TGG - chr8_4:7861111-7861130 None:intergenic 40.0%
!! ATGTTACTGGTTCTCCTCAT+AGG + chr8_4:7861296-7861315 Msa1311180:intron 40.0%
! ATCTTGTTGTCCCAAAGGTA+TGG + chr8_4:7861598-7861617 Msa1311180:intron 40.0%
!! TCACTTTTGGCCATACCTTT+GGG - chr8_4:7861611-7861630 None:intergenic 40.0%
!! ACTACAATGGCAGTCACTTT+TGG - chr8_4:7861624-7861643 None:intergenic 40.0%
!! AATTTCTGGCAGCCAAAATG+AGG + chr8_4:7861698-7861717 Msa1311180:CDS 40.0%
GTATGGCAGAATTACTGAGT+TGG + chr8_4:7861958-7861977 Msa1311180:intron 40.0%
TACCATTCATACTTCTCTCG+CGG - chr8_4:7861989-7862008 None:intergenic 40.0%
!! CACTCTAAGGTTTGACCTTA+TGG + chr8_4:7862051-7862070 Msa1311180:CDS 40.0%
CAACTGGACTTAGCAATGTT+AGG + chr8_4:7862083-7862102 Msa1311180:CDS 40.0%
!! GCTGACATTCAAGTTGTTCT+CGG + chr8_4:7862161-7862180 Msa1311180:three_prime_UTR 40.0%
GTGTTGGAAGAGAATTGAAG+AGG - chr8_4:7858275-7858294 None:intergenic 40.0%
!!! CTTGGGTTTGCATTTTGGTT+TGG - chr8_4:7858400-7858419 None:intergenic 40.0%
AAAATGCAAACCCAAGAACC+CGG + chr8_4:7858404-7858423 Msa1311180:CDS 40.0%
AGAATTGGGTTCTACTGAAC+CGG - chr8_4:7858426-7858445 None:intergenic 40.0%
!! AGACTCGAGTGTTGAGAATT+GGG - chr8_4:7858440-7858459 None:intergenic 40.0%
!! AAGACTCGAGTGTTGAGAAT+TGG - chr8_4:7858441-7858460 None:intergenic 40.0%
GGAGTTTATAGGACAAAGAG+TGG + chr8_4:7858532-7858551 Msa1311180:CDS 40.0%
GTTTATAGGACAAAGAGTGG+TGG + chr8_4:7858535-7858554 Msa1311180:CDS 40.0%
AGAAGATTTCTCGACTTCCT+TGG - chr8_4:7858582-7858601 None:intergenic 40.0%
!! GGAGGTAAAGTTCTAGGAAT+AGG - chr8_4:7858761-7858780 None:intergenic 40.0%
GATTTGGGAGGTAAAGTTCT+AGG - chr8_4:7858767-7858786 None:intergenic 40.0%
GGTGATAAGTAGATAAACGG+TGG - chr8_4:7858792-7858811 None:intergenic 40.0%
ACTAATATACAGGTTCCGGT+AGG - chr8_4:7859511-7859530 None:intergenic 40.0%
GCTGACAAAGTTCTTCACAT+TGG + chr8_4:7859586-7859605 Msa1311180:CDS 40.0%
AATTTCACCGTAGTTGTTCG+AGG - chr8_4:7859691-7859710 None:intergenic 40.0%
AAATATGGGGGTAAGGTTAG+AGG - chr8_4:7859850-7859869 None:intergenic 40.0%
!! ATCCTCTAGAATGCTACGAA+TGG - chr8_4:7859883-7859902 None:intergenic 40.0%
! CTGCTTTAACTTCTAGAGGA+AGG + chr8_4:7860040-7860059 Msa1311180:intron 40.0%
AAGCATGCTATTGGATCACA+TGG - chr8_4:7860118-7860137 None:intergenic 40.0%
TGCTTGGCTCATATATTAGG+TGG + chr8_4:7860217-7860236 Msa1311180:intron 40.0%
!! TGCAACCCACTCATTTTTCA+AGG + chr8_4:7860274-7860293 Msa1311180:CDS 40.0%
CAGTCTGTGGTTGTTATAGT+GGG - chr8_4:7860326-7860345 None:intergenic 40.0%
GATTCACTGTAGTTGTAACC+TGG - chr8_4:7860370-7860389 None:intergenic 40.0%
AGTGAATCAGAAAGCTGTCA+AGG + chr8_4:7860382-7860401 Msa1311180:CDS 40.0%
CAGCTTCCTTCACAATTTCA+AGG - chr8_4:7860445-7860464 None:intergenic 40.0%
GGAAGAGAAAAAATCTTCGG+AGG - chr8_4:7860636-7860655 None:intergenic 40.0%
ACATGTTGCAGAAATGTGGA+TGG + chr8_4:7860769-7860788 Msa1311180:CDS 40.0%
!! TTTCTTCTATTCGGTTTGGG+TGG + chr8_4:7860938-7860957 Msa1311180:intron 40.0%
CAAGTCATTAGCACAGTTCA+TGG - chr8_4:7861017-7861036 None:intergenic 40.0%
GAAGACGATCAATGCAAGTA+TGG - chr8_4:7861111-7861130 None:intergenic 40.0%
!! ATGTTACTGGTTCTCCTCAT+AGG + chr8_4:7861296-7861315 Msa1311180:intron 40.0%
! ATCTTGTTGTCCCAAAGGTA+TGG + chr8_4:7861598-7861617 Msa1311180:intron 40.0%
!! TCACTTTTGGCCATACCTTT+GGG - chr8_4:7861611-7861630 None:intergenic 40.0%
!! ACTACAATGGCAGTCACTTT+TGG - chr8_4:7861624-7861643 None:intergenic 40.0%
!! AATTTCTGGCAGCCAAAATG+AGG + chr8_4:7861698-7861717 Msa1311180:CDS 40.0%
GTATGGCAGAATTACTGAGT+TGG + chr8_4:7861958-7861977 Msa1311180:intron 40.0%
TACCATTCATACTTCTCTCG+CGG - chr8_4:7861989-7862008 None:intergenic 40.0%
!! CACTCTAAGGTTTGACCTTA+TGG + chr8_4:7862051-7862070 Msa1311180:CDS 40.0%
CAACTGGACTTAGCAATGTT+AGG + chr8_4:7862083-7862102 Msa1311180:CDS 40.0%
!! GCTGACATTCAAGTTGTTCT+CGG + chr8_4:7862161-7862180 Msa1311180:three_prime_UTR 40.0%
! GGGTTCTTGGGTTTGCATTT+TGG - chr8_4:7858405-7858424 None:intergenic 45.0%
TTCTACTGAACCGGGTTCTT+GGG - chr8_4:7858417-7858436 None:intergenic 45.0%
GAATTGGGTTCTACTGAACC+GGG - chr8_4:7858425-7858444 None:intergenic 45.0%
! CTTTTTCTAGACCGAACCGA+CGG + chr8_4:7858503-7858522 Msa1311180:CDS 45.0%
TATAGGACAAAGAGTGGTGG+TGG + chr8_4:7858538-7858557 Msa1311180:CDS 45.0%
ATAGGACAAAGAGTGGTGGT+GGG + chr8_4:7858539-7858558 Msa1311180:CDS 45.0%
ACACATGACACGTCTTTCAC+CGG - chr8_4:7858644-7858663 None:intergenic 45.0%
TAAACGGTGGAAGATTTGGG+AGG - chr8_4:7858779-7858798 None:intergenic 45.0%
TAGAACGACCAGCAACTGAA+GGG + chr8_4:7859542-7859561 Msa1311180:CDS 45.0%
CACATTGGGACAGTAGACAT+TGG + chr8_4:7859601-7859620 Msa1311180:CDS 45.0%
GGAACCCGTTTCTTCGATAA+TGG - chr8_4:7859634-7859653 None:intergenic 45.0%
AGTTGTTCGAGGCCGAAAAT+GGG - chr8_4:7859680-7859699 None:intergenic 45.0%
TAGTTGTTCGAGGCCGAAAA+TGG - chr8_4:7859681-7859700 None:intergenic 45.0%
! TTTTCGGCCTCGAACAACTA+CGG + chr8_4:7859681-7859700 Msa1311180:CDS 45.0%
!! CCATGAAAGCATTCAGGTTC+TGG - chr8_4:7859768-7859787 None:intergenic 45.0%
CCAGAACCTGAATGCTTTCA+TGG + chr8_4:7859765-7859784 Msa1311180:intron 45.0%
AGCCATTCGTAGCATTCTAG+AGG + chr8_4:7859878-7859897 Msa1311180:intron 45.0%
TCTAGAGGAAGGGTTGAGAT+AGG + chr8_4:7860051-7860070 Msa1311180:intron 45.0%
GCAGTCTGTGGTTGTTATAG+TGG - chr8_4:7860327-7860346 None:intergenic 45.0%
ATAACAACCACAGACTGCGA+AGG + chr8_4:7860329-7860348 Msa1311180:CDS 45.0%
AGGATTAGGCAACATGTTCC+AGG + chr8_4:7860349-7860368 Msa1311180:CDS 45.0%
GAGAGTTATGCATGTGCTCT+TGG + chr8_4:7860692-7860711 Msa1311180:CDS 45.0%
TGCAGAAATGTGGATGGTTG+AGG + chr8_4:7860775-7860794 Msa1311180:CDS 45.0%
TGTTCAAGTACCTCTGTGAG+CGG + chr8_4:7861035-7861054 Msa1311180:CDS 45.0%
GACTCACTTCAGATCACCTA+AGG + chr8_4:7861361-7861380 Msa1311180:CDS 45.0%
!!! GTCACTTTTGGCCATACCTT+TGG - chr8_4:7861612-7861631 None:intergenic 45.0%
GGCTTACTGTGATAAACTCG+AGG + chr8_4:7861724-7861743 Msa1311180:CDS 45.0%
AATGGAACGGTTAAGCGATC+AGG + chr8_4:7862025-7862044 Msa1311180:CDS 45.0%
ATGGAACGGTTAAGCGATCA+GGG + chr8_4:7862026-7862045 Msa1311180:CDS 45.0%
!! TTGGCCTTGTCATAGCTTCT+TGG - chr8_4:7862124-7862143 None:intergenic 45.0%
!! GACATTCAAGTTGTTCTCGG+AGG + chr8_4:7862164-7862183 Msa1311180:three_prime_UTR 45.0%
! GGGTTCTTGGGTTTGCATTT+TGG - chr8_4:7858405-7858424 None:intergenic 45.0%
TTCTACTGAACCGGGTTCTT+GGG - chr8_4:7858417-7858436 None:intergenic 45.0%
GAATTGGGTTCTACTGAACC+GGG - chr8_4:7858425-7858444 None:intergenic 45.0%
! CTTTTTCTAGACCGAACCGA+CGG + chr8_4:7858503-7858522 Msa1311180:CDS 45.0%
TATAGGACAAAGAGTGGTGG+TGG + chr8_4:7858538-7858557 Msa1311180:CDS 45.0%
ATAGGACAAAGAGTGGTGGT+GGG + chr8_4:7858539-7858558 Msa1311180:CDS 45.0%
ACACATGACACGTCTTTCAC+CGG - chr8_4:7858644-7858663 None:intergenic 45.0%
TAAACGGTGGAAGATTTGGG+AGG - chr8_4:7858779-7858798 None:intergenic 45.0%
TAGAACGACCAGCAACTGAA+GGG + chr8_4:7859542-7859561 Msa1311180:CDS 45.0%
CACATTGGGACAGTAGACAT+TGG + chr8_4:7859601-7859620 Msa1311180:CDS 45.0%
GGAACCCGTTTCTTCGATAA+TGG - chr8_4:7859634-7859653 None:intergenic 45.0%
AGTTGTTCGAGGCCGAAAAT+GGG - chr8_4:7859680-7859699 None:intergenic 45.0%
TAGTTGTTCGAGGCCGAAAA+TGG - chr8_4:7859681-7859700 None:intergenic 45.0%
! TTTTCGGCCTCGAACAACTA+CGG + chr8_4:7859681-7859700 Msa1311180:CDS 45.0%
!! CCATGAAAGCATTCAGGTTC+TGG - chr8_4:7859768-7859787 None:intergenic 45.0%
CCAGAACCTGAATGCTTTCA+TGG + chr8_4:7859765-7859784 Msa1311180:intron 45.0%
AGCCATTCGTAGCATTCTAG+AGG + chr8_4:7859878-7859897 Msa1311180:intron 45.0%
TCTAGAGGAAGGGTTGAGAT+AGG + chr8_4:7860051-7860070 Msa1311180:intron 45.0%
GCAGTCTGTGGTTGTTATAG+TGG - chr8_4:7860327-7860346 None:intergenic 45.0%
ATAACAACCACAGACTGCGA+AGG + chr8_4:7860329-7860348 Msa1311180:CDS 45.0%
AGGATTAGGCAACATGTTCC+AGG + chr8_4:7860349-7860368 Msa1311180:CDS 45.0%
GAGAGTTATGCATGTGCTCT+TGG + chr8_4:7860692-7860711 Msa1311180:CDS 45.0%
TGCAGAAATGTGGATGGTTG+AGG + chr8_4:7860775-7860794 Msa1311180:CDS 45.0%
TGTTCAAGTACCTCTGTGAG+CGG + chr8_4:7861035-7861054 Msa1311180:CDS 45.0%
GACTCACTTCAGATCACCTA+AGG + chr8_4:7861361-7861380 Msa1311180:CDS 45.0%
!!! GTCACTTTTGGCCATACCTT+TGG - chr8_4:7861612-7861631 None:intergenic 45.0%
GGCTTACTGTGATAAACTCG+AGG + chr8_4:7861724-7861743 Msa1311180:CDS 45.0%
AATGGAACGGTTAAGCGATC+AGG + chr8_4:7862025-7862044 Msa1311180:CDS 45.0%
ATGGAACGGTTAAGCGATCA+GGG + chr8_4:7862026-7862045 Msa1311180:CDS 45.0%
!! TTGGCCTTGTCATAGCTTCT+TGG - chr8_4:7862124-7862143 None:intergenic 45.0%
!! GACATTCAAGTTGTTCTCGG+AGG + chr8_4:7862164-7862183 Msa1311180:three_prime_UTR 45.0%
GTTCTACTGAACCGGGTTCT+TGG - chr8_4:7858418-7858437 None:intergenic 50.0%
TATAAACTCCGAACCGCCGT+CGG - chr8_4:7858522-7858541 None:intergenic 50.0%
ATATCATCGTCGGCCGTCAA+TGG - chr8_4:7858617-7858636 None:intergenic 50.0%
CACCGGCGTTATATCATCGT+CGG - chr8_4:7858627-7858646 None:intergenic 50.0%
GGTGAAAGACGTGTCATGTG+TGG + chr8_4:7858643-7858662 Msa1311180:CDS 50.0%
GTGTGGAGATTCTTCAGTCC+AGG + chr8_4:7858660-7858679 Msa1311180:CDS 50.0%
CGTGGCAACAGATGAACCAT+CGG - chr8_4:7858813-7858832 None:intergenic 50.0%
TTCATCTGTTGCCACGCTTC+AGG + chr8_4:7858817-7858836 Msa1311180:CDS 50.0%
GAAAACACGAACCTGAAGCG+TGG - chr8_4:7858831-7858850 None:intergenic 50.0%
!! CCTAGCCTTCTTTTGCCTAC+CGG + chr8_4:7859493-7859512 Msa1311180:CDS 50.0%
AGGTTCCGGTAGGCAAAAGA+AGG - chr8_4:7859501-7859520 None:intergenic 50.0%
CTAGAACGACCAGCAACTGA+AGG + chr8_4:7859541-7859560 Msa1311180:CDS 50.0%
! ATCGAAGAAACGGGTTCCAC+TGG + chr8_4:7859636-7859655 Msa1311180:CDS 50.0%
ACCACAGACTGCGAAGGATT+AGG + chr8_4:7860335-7860354 Msa1311180:CDS 50.0%
TGTCTCTGGTCGCTTACATC+TGG + chr8_4:7860670-7860689 Msa1311180:CDS 50.0%
GTGGATGGTTGAGGCTGAAA+TGG + chr8_4:7860784-7860803 Msa1311180:CDS 50.0%
GTTCAAGTACCTCTGTGAGC+GGG + chr8_4:7861036-7861055 Msa1311180:CDS 50.0%
TTTCCAAAACCCGCTCACAG+AGG - chr8_4:7861048-7861067 None:intergenic 50.0%
! CAGTAAGCCGCTCCTCATTT+TGG - chr8_4:7861713-7861732 None:intergenic 50.0%
! TGCCGCGAGAGAAGTATGAA+TGG + chr8_4:7861984-7862003 Msa1311180:CDS 50.0%
AGCGATCAGGGTTCACTCTA+AGG + chr8_4:7862038-7862057 Msa1311180:CDS 50.0%
GTTCTACTGAACCGGGTTCT+TGG - chr8_4:7858418-7858437 None:intergenic 50.0%
TATAAACTCCGAACCGCCGT+CGG - chr8_4:7858522-7858541 None:intergenic 50.0%
ATATCATCGTCGGCCGTCAA+TGG - chr8_4:7858617-7858636 None:intergenic 50.0%
CACCGGCGTTATATCATCGT+CGG - chr8_4:7858627-7858646 None:intergenic 50.0%
GGTGAAAGACGTGTCATGTG+TGG + chr8_4:7858643-7858662 Msa1311180:CDS 50.0%
GTGTGGAGATTCTTCAGTCC+AGG + chr8_4:7858660-7858679 Msa1311180:CDS 50.0%
CGTGGCAACAGATGAACCAT+CGG - chr8_4:7858813-7858832 None:intergenic 50.0%
TTCATCTGTTGCCACGCTTC+AGG + chr8_4:7858817-7858836 Msa1311180:CDS 50.0%
GAAAACACGAACCTGAAGCG+TGG - chr8_4:7858831-7858850 None:intergenic 50.0%
!! CCTAGCCTTCTTTTGCCTAC+CGG + chr8_4:7859493-7859512 Msa1311180:CDS 50.0%
AGGTTCCGGTAGGCAAAAGA+AGG - chr8_4:7859501-7859520 None:intergenic 50.0%
CTAGAACGACCAGCAACTGA+AGG + chr8_4:7859541-7859560 Msa1311180:CDS 50.0%
! ATCGAAGAAACGGGTTCCAC+TGG + chr8_4:7859636-7859655 Msa1311180:CDS 50.0%
ACCACAGACTGCGAAGGATT+AGG + chr8_4:7860335-7860354 Msa1311180:CDS 50.0%
TGTCTCTGGTCGCTTACATC+TGG + chr8_4:7860670-7860689 Msa1311180:CDS 50.0%
GTGGATGGTTGAGGCTGAAA+TGG + chr8_4:7860784-7860803 Msa1311180:CDS 50.0%
GTTCAAGTACCTCTGTGAGC+GGG + chr8_4:7861036-7861055 Msa1311180:CDS 50.0%
TTTCCAAAACCCGCTCACAG+AGG - chr8_4:7861048-7861067 None:intergenic 50.0%
! CAGTAAGCCGCTCCTCATTT+TGG - chr8_4:7861713-7861732 None:intergenic 50.0%
! TGCCGCGAGAGAAGTATGAA+TGG + chr8_4:7861984-7862003 Msa1311180:CDS 50.0%
AGCGATCAGGGTTCACTCTA+AGG + chr8_4:7862038-7862057 Msa1311180:CDS 50.0%
TTTCTAGACCGAACCGACGG+CGG + chr8_4:7858506-7858525 Msa1311180:CDS 55.0%
! GACGGCGGTTCGGAGTTTAT+AGG + chr8_4:7858521-7858540 Msa1311180:CDS 55.0%
CGGATGGGTGAAGTCATCCA+AGG + chr8_4:7858562-7858581 Msa1311180:CDS 55.0%
GGCCGACGATGATATAACGC+CGG + chr8_4:7858622-7858641 Msa1311180:CDS 55.0%
CCGGTAGGCAAAAGAAGGCT+AGG - chr8_4:7859496-7859515 None:intergenic 55.0%
GCGTGTTTCCCTTCAGTTGC+TGG - chr8_4:7859553-7859572 None:intergenic 55.0%
GCCTAATCCTTCGCAGTCTG+TGG - chr8_4:7860339-7860358 None:intergenic 55.0%
! CGAAAGCAATAGGGAAGCGC+TGG + chr8_4:7860505-7860524 Msa1311180:CDS 55.0%
!! GTACCTCTGTGAGCGGGTTT+TGG + chr8_4:7861042-7861061 Msa1311180:CDS 55.0%
CTGGCAGCCAAAATGAGGAG+CGG + chr8_4:7861703-7861722 Msa1311180:CDS 55.0%
TTTCTAGACCGAACCGACGG+CGG + chr8_4:7858506-7858525 Msa1311180:CDS 55.0%
! GACGGCGGTTCGGAGTTTAT+AGG + chr8_4:7858521-7858540 Msa1311180:CDS 55.0%
CGGATGGGTGAAGTCATCCA+AGG + chr8_4:7858562-7858581 Msa1311180:CDS 55.0%
GGCCGACGATGATATAACGC+CGG + chr8_4:7858622-7858641 Msa1311180:CDS 55.0%
CCGGTAGGCAAAAGAAGGCT+AGG - chr8_4:7859496-7859515 None:intergenic 55.0%
GCGTGTTTCCCTTCAGTTGC+TGG - chr8_4:7859553-7859572 None:intergenic 55.0%
GCCTAATCCTTCGCAGTCTG+TGG - chr8_4:7860339-7860358 None:intergenic 55.0%
! CGAAAGCAATAGGGAAGCGC+TGG + chr8_4:7860505-7860524 Msa1311180:CDS 55.0%
!! GTACCTCTGTGAGCGGGTTT+TGG + chr8_4:7861042-7861061 Msa1311180:CDS 55.0%
CTGGCAGCCAAAATGAGGAG+CGG + chr8_4:7861703-7861722 Msa1311180:CDS 55.0%
!! GGACAAAGAGTGGTGGTGGG+CGG + chr8_4:7858542-7858561 Msa1311180:CDS 60.0%
!! AAAGAGTGGTGGTGGGCGGA+TGG + chr8_4:7858546-7858565 Msa1311180:CDS 60.0%
!! AAGAGTGGTGGTGGGCGGAT+GGG + chr8_4:7858547-7858566 Msa1311180:CDS 60.0%
TCATCGTCGGCCGTCAATGG+CGG - chr8_4:7858614-7858633 None:intergenic 60.0%
!! GGACAAAGAGTGGTGGTGGG+CGG + chr8_4:7858542-7858561 Msa1311180:CDS 60.0%
!! AAAGAGTGGTGGTGGGCGGA+TGG + chr8_4:7858546-7858565 Msa1311180:CDS 60.0%
!! AAGAGTGGTGGTGGGCGGAT+GGG + chr8_4:7858547-7858566 Msa1311180:CDS 60.0%
TCATCGTCGGCCGTCAATGG+CGG - chr8_4:7858614-7858633 None:intergenic 60.0%
AGACCGAACCGACGGCGGTT+CGG + chr8_4:7858511-7858530 Msa1311180:CDS 65.0%
! ACTCCGAACCGCCGTCGGTT+CGG - chr8_4:7858517-7858536 None:intergenic 65.0%
TCCACCTCCGCCGCCATTGA+CGG + chr8_4:7858601-7858620 Msa1311180:CDS 65.0%
AGACCGAACCGACGGCGGTT+CGG + chr8_4:7858511-7858530 Msa1311180:CDS 65.0%
! ACTCCGAACCGCCGTCGGTT+CGG - chr8_4:7858517-7858536 None:intergenic 65.0%
TCCACCTCCGCCGCCATTGA+CGG + chr8_4:7858601-7858620 Msa1311180:CDS 65.0%
TCGTCGGCCGTCAATGGCGG+CGG - chr8_4:7858611-7858630 None:intergenic 70.0%
TCGTCGGCCGTCAATGGCGG+CGG - chr8_4:7858611-7858630 None:intergenic 70.0%
GCCGTCAATGGCGGCGGAGG+TGG - chr8_4:7858605-7858624 None:intergenic 75.0%
TCGGCCGTCAATGGCGGCGG+AGG - chr8_4:7858608-7858627 None:intergenic 75.0%
GCCGTCAATGGCGGCGGAGG+TGG - chr8_4:7858605-7858624 None:intergenic 75.0%
TCGGCCGTCAATGGCGGCGG+AGG - chr8_4:7858608-7858627 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 7858266 7862350 7858266 ID=Msa1311180;Name=Msa1311180
chr8_4 mRNA 7858266 7862350 7858266 ID=Msa1311180-mRNA-1;Parent=Msa1311180;Name=Msa1311180-mRNA-1;_AED=0.10;_eAED=0.10;_QI=117|1|1|1|1|1|8|200|633
chr8_4 exon 7858266 7858838 7858266 ID=Msa1311180-mRNA-1:exon:2878;Parent=Msa1311180-mRNA-1
chr8_4 exon 7859466 7859702 7859466 ID=Msa1311180-mRNA-1:exon:2879;Parent=Msa1311180-mRNA-1
chr8_4 exon 7860236 7860823 7860236 ID=Msa1311180-mRNA-1:exon:2880;Parent=Msa1311180-mRNA-1
chr8_4 exon 7861010 7861195 7861010 ID=Msa1311180-mRNA-1:exon:2881;Parent=Msa1311180-mRNA-1
chr8_4 exon 7861318 7861382 7861318 ID=Msa1311180-mRNA-1:exon:2882;Parent=Msa1311180-mRNA-1
chr8_4 exon 7861488 7861614 7861488 ID=Msa1311180-mRNA-1:exon:2883;Parent=Msa1311180-mRNA-1
chr8_4 exon 7861687 7861745 7861687 ID=Msa1311180-mRNA-1:exon:2884;Parent=Msa1311180-mRNA-1
chr8_4 exon 7861967 7862350 7861967 ID=Msa1311180-mRNA-1:exon:2885;Parent=Msa1311180-mRNA-1
chr8_4 five_prime_UTR 7858266 7858382 7858266 ID=Msa1311180-mRNA-1:five_prime_utr;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7858383 7858838 7858383 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7859466 7859702 7859466 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7860236 7860823 7860236 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7861010 7861195 7861010 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7861318 7861382 7861318 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7861488 7861614 7861488 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7861687 7861745 7861687 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 CDS 7861967 7862150 7861967 ID=Msa1311180-mRNA-1:cds;Parent=Msa1311180-mRNA-1
chr8_4 three_prime_UTR 7862151 7862350 7862151 ID=Msa1311180-mRNA-1:three_prime_utr;Parent=Msa1311180-mRNA-1
Gene Sequence

>Msa1311180

ATGGCAAAAGAAAACCAAACCAAAATGCAAACCCAAGAACCCGGTTCAGTAGAACCCAATTCTCAACACTCGAGTCTTTTGACTCCTTTTAAATACTCAAACCGGGTTCAATTAAAAACACTTTTTCTAGACCGAACCGACGGCGGTTCGGAGTTTATAGGACAAAGAGTGGTGGTGGGCGGATGGGTGAAGTCATCCAAGGAAGTCGAGAAATCTTCTCCACCTCCGCCGCCATTGACGGCCGACGATGATATAACGCCGGTGAAAGACGTGTCATGTGTGGAGATTCTTCAGTCCAGGATTCCTTTGATTCGTAATATAATGGAAGTTTTAGGTGGAAGCAGTTACGTGTCTCGCAAGAAATTGCGTGATTCTCCTATTCCTAGAACTTTACCTCCCAAATCTTCCACCGTTTATCTACTTATCACCGATGGTTCATCTGTTGCCACGCTTCAGGTTGTGGTGGATTCTTCAATAACTACACCTAGCCTTCTTTTGCCTACCGGAACCTGTATATTAGTTGAAGGTCTGCTAGAACGACCAGCAACTGAAGGGAAACACGCTATTCAGTTAAAGGCTGACAAAGTTCTTCACATTGGGACAGTAGACATTGGCAAGTATCCATTATCGAAGAAACGGGTTCCACTGGATGCATTAAGAGATTTTTCCCATTTTCGGCCTCGAACAACTACGGTGGCAACTGTCATGCGAGTTCGCAGTGCTCTATCTTTTGCAACCCACTCATTTTTCAAGGAACATGCATTTTTCGACGTGCAAGTACCCACTATAACAACCACAGACTGCGAAGGATTAGGCAACATGTTCCAGGTTACAACTACAGTGAATCAGAAAGCTGTCAAGGAGAAGCTGAGTACAATTTATGAGAATGAAGGTGTTAGCCTTGAAATTGTGAAGGAAGCTGCCAAAGAGAAAAGCAAACTAGTTGAAACTTTGAAAAGAAGCGAAAGCAATAGGGAAGCGCTGGCTGCAGCAATTCAAGATCTGAAGAAAACTAATGAACTGGCATCACAATTGGAAGTGAGAGAAAAGAAAAAATTGGGAACTTCATTAAAGGATGAAAAATTAGACACCTCCGAAGATTTTTTCTCTTCCCAAACTTATTTGACTGTCTCTGGTCGCTTACATCTGGAGAGTTATGCATGTGCTCTTGGAAATGTGTATTCGTTTGGACCTAGATTTCACGCAGATAAAACAGATTCTGCTAAACATGTTGCAGAAATGTGGATGGTTGAGGCTGAAATGGCTTTTGCTGAATTAAAGGACTCCATGAACTGTGCTAATGACTTGTTCAAGTACCTCTGTGAGCGGGTTTTGGAAAATTGCTCTGAAGATATGAAGTTTGTTGCCAAAAGAATTGACCATACTTGCATTGATCGTCTTCAGCAGATTATATCAAGTTCCCCTGAAATAATTTCCTACAATGAAGCTTTAGATGTTCTTAGAAAGGCTGAAGATAAGAAATCTGAAACAAAGTTTGATTCAGGTCTTAGACTCACTTCAGATCACCTAAGCTATCTAGTTGATGCCATCTACAAAAAACCAGTTATAATTCACAGTTATCCGAAAGAAGCTAAACCATTCTATGTTCGAGTTAATGATGATAAAACTGTAGCTGCATTTGATCTTGTTGTCCCAAAGGTTGGAACTATAATTTCTGGCAGCCAAAATGAGGAGCGGCTTACTGTGATAAACTCGAGAATTACTGAGTTGGGTTTGCCGCGAGAGAAGTATGAATGGTACTTAGATCTTTGTCTAAATGGAACGGTTAAGCGATCAGGGTTCACTCTAAGGTTTGACCTTATGGTCCTTTTTACAACTGGACTTAGCAATGTTAGGGATGTTATTCCTTTTCCAAGAAGCTATGACAAGGCCAACAATTAA

Protein sequence

>Msa1311180

MAKENQTKMQTQEPGSVEPNSQHSSLLTPFKYSNRVQLKTLFLDRTDGGSEFIGQRVVVGGWVKSSKEVEKSSPPPPPLTADDDITPVKDVSCVEILQSRIPLIRNIMEVLGGSSYVSRKKLRDSPIPRTLPPKSSTVYLLITDGSSVATLQVVVDSSITTPSLLLPTGTCILVEGLLERPATEGKHAIQLKADKVLHIGTVDIGKYPLSKKRVPLDALRDFSHFRPRTTTVATVMRVRSALSFATHSFFKEHAFFDVQVPTITTTDCEGLGNMFQVTTTVNQKAVKEKLSTIYENEGVSLEIVKEAAKEKSKLVETLKRSESNREALAAAIQDLKKTNELASQLEVREKKKLGTSLKDEKLDTSEDFFSSQTYLTVSGRLHLESYACALGNVYSFGPRFHADKTDSAKHVAEMWMVEAEMAFAELKDSMNCANDLFKYLCERVLENCSEDMKFVAKRIDHTCIDRLQQIISSSPEIISYNEALDVLRKAEDKKSETKFDSGLRLTSDHLSYLVDAIYKKPVIIHSYPKEAKPFYVRVNDDKTVAAFDLVVPKVGTIISGSQNEERLTVINSRITELGLPREKYEWYLDLCLNGTVKRSGFTLRFDLMVLFTTGLSNVRDVIPFPRSYDKANN*