AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1311390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311390 MtrunA17_Chr8g0339101 98.218 449 2 2 45 487 254 702 0.0 900
Msa1311390 MtrunA17_Chr4g0000581 76.889 450 96 4 45 487 251 699 0.0 693
Msa1311390 MtrunA17_Chr3g0139081 70.348 489 131 5 10 487 202 687 0.0 681
Msa1311390 MtrunA17_Chr6g0451381 75.111 450 105 3 45 487 217 666 0.0 676
Msa1311390 MtrunA17_Chr3g0135191 69.899 495 122 6 5 486 217 697 0.0 663
Msa1311390 MtrunA17_Chr1g0198111 43.049 446 218 5 45 483 108 524 9.24e-124 371
Msa1311390 MtrunA17_Chr1g0179441 41.794 457 230 6 34 483 90 517 6.62e-121 363
Msa1311390 MtrunA17_Chr4g0027221 39.709 481 255 6 22 486 81 542 4.06e-120 362
Msa1311390 MtrunA17_Chr1g0179381 41.469 463 231 8 28 483 87 516 7.62e-120 361
Msa1311390 MtrunA17_Chr1g0179421 39.831 472 239 7 20 483 83 517 2.55e-119 360
Msa1311390 MtrunA17_Chr7g0265711 40.126 476 241 7 22 483 81 526 2.39e-118 357
Msa1311390 MtrunA17_Chr7g0264621 42.667 450 222 7 45 486 106 527 2.55e-117 355
Msa1311390 MtrunA17_Chr1g0179391 47.319 317 160 3 76 385 1 317 2.11e-105 317
Msa1311390 MtrunA17_Chr4g0064791 56.180 89 37 1 45 131 112 200 2.25e-23 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1311390 AT3G07330.1 82.405 449 72 3 45 487 235 682 0.0 774
Msa1311390 AT3G07330.2 82.405 449 72 3 45 487 235 682 0.0 774
Msa1311390 AT2G24630.1 74.115 452 106 5 45 487 241 690 0.0 670
Msa1311390 AT2G24630.2 74.115 452 106 5 45 487 241 690 0.0 670
Msa1311390 AT3G28180.1 71.520 467 103 5 45 487 213 673 0.0 670
Msa1311390 AT4G31590.1 75.055 453 102 4 45 487 241 692 0.0 663
Msa1311390 AT4G07960.1 69.877 488 132 5 5 486 220 698 0.0 650
Msa1311390 AT4G07960.2 69.877 488 132 5 5 486 220 698 0.0 650
Msa1311390 AT5G22740.1 41.242 451 227 6 45 486 111 532 2.98e-119 360
Msa1311390 AT5G03760.1 42.094 449 224 5 45 486 111 530 2.52e-117 355
Msa1311390 AT1G23480.3 48.179 357 178 3 45 394 62 418 2.94e-116 351
Msa1311390 AT1G23480.1 48.179 357 178 3 45 394 134 490 3.16e-115 350
Msa1311390 AT1G23480.2 48.179 357 178 3 45 394 134 490 3.16e-115 350
Msa1311390 AT4G13410.1 40.135 446 226 5 45 483 125 536 2.46e-114 348
Msa1311390 AT1G24070.1 40.359 446 229 6 45 483 136 551 2.48e-113 345
Msa1311390 AT2G35650.4 45.777 367 192 3 34 393 50 416 1.23e-111 339
Msa1311390 AT2G35650.2 45.777 367 192 3 34 393 50 416 1.23e-111 339
Msa1311390 AT5G16190.1 39.606 457 239 5 34 483 16 442 3.46e-111 336
Msa1311390 AT2G35650.1 45.777 367 192 3 34 393 122 488 9.53e-111 339
Msa1311390 AT5G16190.3 40.135 446 230 5 45 483 88 503 2.65e-110 336
Msa1311390 AT5G16190.2 45.504 367 193 3 34 393 77 443 1.43e-107 327
Msa1311390 AT3G56000.1 38.901 455 231 7 45 486 106 526 1.72e-107 330
Msa1311390 AT1G23480.4 41.063 414 208 5 77 483 21 405 9.05e-107 324
Msa1311390 AT5G16190.4 37.370 479 230 6 45 483 88 536 3.47e-103 319
Msa1311390 AT4G13410.3 39.706 408 205 5 83 483 2 375 4.53e-103 313
Msa1311390 AT4G16590.1 40.777 412 204 7 80 483 140 519 4.68e-103 318
Msa1311390 AT2G35650.3 46.894 322 164 3 79 393 9 330 1.07e-100 308
Msa1311390 AT1G24070.2 45.965 285 137 5 34 312 125 398 5.92e-79 252
Msa1311390 AT4G13410.2 48.000 250 124 2 34 277 114 363 4.97e-77 247

Find 144 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACTGTATATTGCTTTAT+AGG 0.167693 8_4:-8168331 None:intergenic
AGAAGATAAGGCACTATAAA+TGG 0.168879 8_4:-8167588 None:intergenic
GGTATCTTTATTGACTTCTT+TGG 0.223575 8_4:+8165638 Msa1311390:CDS
GTTATTGAGACACAGATTTC+TGG 0.228823 8_4:+8168476 Msa1311390:three_prime_UTR
GCAACTGATTTGCTGTAAAT+TGG 0.240412 8_4:-8168157 None:intergenic
TAAGATGTTCTCTGTGGTTT+TGG 0.244381 8_4:+8168131 Msa1311390:three_prime_UTR
GACACTTGAAGAAGGGTTTC+TGG 0.255151 8_4:+8168308 Msa1311390:three_prime_UTR
GGACTTGTTACCTTGAAATA+AGG 0.259806 8_4:-8164761 None:intergenic
CATAGATCTTCCTCAGATTC+AGG 0.261105 8_4:+8167780 Msa1311390:CDS
GAGAGGTTCATAACCATCTT+TGG 0.273243 8_4:-8160212 None:intergenic
TCAAGGCAGAAGTGCATAAA+TGG 0.284235 8_4:+8164570 Msa1311390:CDS
ATCGTCTTCTTTAAGAAATC+TGG 0.286592 8_4:-8164737 None:intergenic
CTTCTGCCTTGATAAGGTTT+TGG 0.286898 8_4:-8164559 None:intergenic
CAACAGCACCGCTGGCATTC+TGG 0.296682 8_4:+8165925 Msa1311390:CDS
TGGGTTGTTTGTTACATTCC+TGG 0.297643 8_4:+8167522 Msa1311390:CDS
ATTGACTTCTTTGGTTTCAA+TGG 0.343119 8_4:+8165647 Msa1311390:CDS
TTACAAATGCCCACCTTGCC+TGG 0.343213 8_4:-8165538 None:intergenic
TGAAAACATGCTAACAATCT+TGG 0.356664 8_4:-8168505 None:intergenic
GGCAAACCTTAAACCTATCT+TGG 0.357047 8_4:+8168089 Msa1311390:three_prime_UTR
TATGTTCCAAGATAGGTTTA+AGG 0.358919 8_4:-8168095 None:intergenic
TCCATTGACCATGTTCCTTC+CGG 0.362707 8_4:+8167482 Msa1311390:CDS
ATTCTATTTGTCAGGTTAGT+TGG 0.366439 8_4:+8167370 Msa1311390:intron
AGCAAACAGTACTGCAAATT+CGG 0.367355 8_4:-8168189 None:intergenic
AAATAAGTATGTTCCAAGAT+AGG 0.371858 8_4:-8168102 None:intergenic
CAGGCTGGGAGCTCAGCTTC+CGG 0.372617 8_4:-8167501 None:intergenic
GTTGTTGGTCTTGATTTGAT+TGG 0.373538 8_4:+8167981 Msa1311390:CDS
TTCTATTTGTCAGGTTAGTT+GGG 0.376306 8_4:+8167371 Msa1311390:intron
ATTCCATCTCCCTTGATTGT+TGG 0.378703 8_4:+8160178 Msa1311390:CDS
ATTGAAGGGAAGGGATGATT+TGG 0.384482 8_4:+8165508 Msa1311390:intron
TGTACAAGCATTCTCTCCTT+TGG 0.390072 8_4:-8164506 None:intergenic
AACTTACCCCTTGAAATAAT+AGG 0.392282 8_4:-8167953 None:intergenic
TTCTACTTCCTATTATTTCA+AGG 0.392356 8_4:+8167945 Msa1311390:CDS
AGACTATTAGATCGCATTAG+AGG 0.393143 8_4:-8167756 None:intergenic
GGCAGCAAACTTTCCAAAGA+TGG 0.402583 8_4:+8160199 Msa1311390:CDS
AAGAGCGTGAACGAATAAAA+TGG 0.405345 8_4:-8167447 None:intergenic
ACAATTGATCTATACACAAT+GGG 0.412122 8_4:-8160241 None:intergenic
GAAGACGATACCTTATTTCA+AGG 0.414787 8_4:+8164751 Msa1311390:CDS
TGTTAAGGATTATGACTTTG+TGG 0.416744 8_4:+8164685 Msa1311390:CDS
TATGCACTTCTGCCTTGATA+AGG 0.420288 8_4:-8164565 None:intergenic
TTTGGTTTCAATGGAACTGC+TGG 0.420392 8_4:+8165656 Msa1311390:CDS
TTAAGAAATCTGGTGTTGGC+TGG 0.423624 8_4:-8164727 None:intergenic
TAACTGCTGCAATGGATTGA+TGG 0.423667 8_4:-8164469 None:intergenic
TCAATGGAACTGCTGGTGTC+TGG 0.424551 8_4:+8165663 Msa1311390:CDS
ATTAGATCGCATTAGAGGTT+CGG 0.426256 8_4:-8167751 None:intergenic
CGGAAGCTGAGCTCCCAGCC+TGG 0.426639 8_4:+8167502 Msa1311390:CDS
TTCTCTCCTTTGGCCAATCC+AGG 0.431518 8_4:-8164496 None:intergenic
CTTTGGAAGTTCTTACGAAT+GGG 0.432489 8_4:+8167668 Msa1311390:CDS
AAGTTTAATGCAATGATATC+CGG 0.439589 8_4:+8167636 Msa1311390:CDS
AATGGGAATGACCGTGGGGC+TGG 0.440805 8_4:-8167570 None:intergenic
CCTCATTGATTCATGATAAA+CGG 0.441399 8_4:+8168058 Msa1311390:three_prime_UTR
AAGGTCATCAGAGACAGATT+TGG 0.442220 8_4:+8167710 Msa1311390:CDS
CAATTTATCGTTCCACTTCG+AGG 0.446447 8_4:+8165598 Msa1311390:CDS
TCTTGATTTGATTGGAGAGC+AGG 0.447596 8_4:+8167989 Msa1311390:CDS
AAAGTTGTTTCAGTTCTGAA+TGG 0.457136 8_4:+8168274 Msa1311390:three_prime_UTR
ACCAGCCGCCACTCTCCTCT+AGG 0.460033 8_4:-8165697 None:intergenic
ACAATCAAGGGAGATGGAAT+AGG 0.462443 8_4:-8160175 None:intergenic
AAGTTTGCTGCCAACAATCA+AGG 0.463330 8_4:-8160188 None:intergenic
TGCTGGTGTCTGGAGAATAA+AGG 0.463477 8_4:+8165673 Msa1311390:CDS
TTCTTTAAGAAATCTGGTGT+TGG 0.467471 8_4:-8164731 None:intergenic
ACTTCCAAAGCGAAATAATC+CGG 0.468385 8_4:-8167655 None:intergenic
AATGGCAACAAAGGGGTGTT+CGG 0.468454 8_4:+8164588 Msa1311390:CDS
GAAGATAAGGCACTATAAAT+GGG 0.469507 8_4:-8167587 None:intergenic
CATTGCAGCAGTTAGTATCC+TGG 0.472320 8_4:+8164478 Msa1311390:CDS
TTATACGCCTCGTAAGTCTC+TGG 0.481256 8_4:-8165898 None:intergenic
CACATACGAAACAATTGCAT+TGG 0.483298 8_4:-8165949 None:intergenic
TGTACAAGTCCTTGATGATT+CGG 0.485266 8_4:+8164523 Msa1311390:CDS
AAGATGGAATTTAATTTACA+AGG 0.486255 8_4:-8168584 None:intergenic
GCTTTGGAAGTTCTTACGAA+TGG 0.487566 8_4:+8167667 Msa1311390:CDS
AGATTTGGTTGCCTATGAAA+AGG 0.488795 8_4:+8167725 Msa1311390:CDS
ATGTAACAAACAACCCAGGC+TGG 0.491766 8_4:-8167516 None:intergenic
CAGGATACTAACTGCTGCAA+TGG 0.493525 8_4:-8164477 None:intergenic
AGTGCATAAATGGCAACAAA+GGG 0.493869 8_4:+8164580 Msa1311390:CDS
AATGAGTTGTGATTATGTTA+AGG 0.495103 8_4:+8164670 Msa1311390:CDS
ATATCCGGATTATTTCGCTT+TGG 0.495428 8_4:+8167651 Msa1311390:CDS
AAAACCACAGAGAACATCTT+AGG 0.500600 8_4:-8168129 None:intergenic
TGTTGATGTACTTCGTTCAA+AGG 0.501646 8_4:+8165975 Msa1311390:CDS
GGAAGCTGAGCTCCCAGCCT+GGG 0.505831 8_4:+8167503 Msa1311390:CDS
TCTACTTCCTATTATTTCAA+GGG 0.507497 8_4:+8167946 Msa1311390:CDS
AGAAGCTTACTTTCTGCTCA+AGG 0.508396 8_4:+8167915 Msa1311390:CDS
TCATGATAAACGGTCACAAT+GGG 0.510152 8_4:+8168068 Msa1311390:three_prime_UTR
GTGTTCTCAAATAGAAGATA+AGG 0.510492 8_4:-8167600 None:intergenic
GGATGATTTGGCATTAGTCC+AGG 0.519366 8_4:+8165520 Msa1311390:CDS
TCCGGAAGGAACATGGTCAA+TGG 0.522315 8_4:-8167483 None:intergenic
ACAGCAAATCAGTTGCTGCT+TGG 0.523373 8_4:+8168164 Msa1311390:three_prime_UTR
ATTGTGTATAGATCAATTGT+TGG 0.525969 8_4:+8160244 Msa1311390:CDS
CAGCAGTTAGTATCCTGGAT+TGG 0.527759 8_4:+8164483 Msa1311390:CDS
TTCGTGCTCATCTCTGCGGA+TGG 0.530530 8_4:+8165756 Msa1311390:CDS
TTTGCCTGCCTGAACTGAAA+AGG 0.533100 8_4:+8168353 Msa1311390:three_prime_UTR
CTCAGCTTCCGGAAGGAACA+TGG 0.534805 8_4:-8167490 None:intergenic
GCAGAATAAGCTTCCTCAGA+AGG 0.541637 8_4:-8167425 None:intergenic
CCAGCCGCCACTCTCCTCTA+GGG 0.542535 8_4:-8165696 None:intergenic
AGATATCCAAAACCTTATCA+AGG 0.543821 8_4:+8164553 Msa1311390:CDS
AATGTGTCGACACTTGAAGA+AGG 0.545085 8_4:+8168300 Msa1311390:three_prime_UTR
CCCTAGAGGAGAGTGGCGGC+TGG 0.547077 8_4:+8165696 Msa1311390:CDS
GAGGTTGAACAGCAGGTGAA+TGG 0.549131 8_4:+8165617 Msa1311390:intron
CTGCCAACAATCAAGGGAGA+TGG 0.551465 8_4:-8160181 None:intergenic
AACAATTGATCTATACACAA+TGG 0.553366 8_4:-8160242 None:intergenic
CTATAAATGGGAATGACCGT+GGG 0.571531 8_4:-8167575 None:intergenic
CTACTTCATCCGAATCATCA+AGG 0.572577 8_4:-8164532 None:intergenic
ACGAACAACTGTTGAGGACA+TGG 0.575504 8_4:+8165724 Msa1311390:CDS
GCTTATACGTACAGGATACA+AGG 0.578640 8_4:+8164628 Msa1311390:intron
CTTAGGATAGACATGACTCC+AGG 0.581702 8_4:-8167540 None:intergenic
ATACGTACAGGATACAAGGC+AGG 0.583627 8_4:+8164632 Msa1311390:intron
TTCATGATAAACGGTCACAA+TGG 0.584493 8_4:+8168067 Msa1311390:three_prime_UTR
CTCTTCAATACCTGAATCTG+AGG 0.585854 8_4:-8167790 None:intergenic
ATGTGTCGACACTTGAAGAA+GGG 0.589751 8_4:+8168301 Msa1311390:three_prime_UTR
AAGTGCATAAATGGCAACAA+AGG 0.590116 8_4:+8164579 Msa1311390:CDS
AACTTATAAAGCATATGACT+TGG 0.590845 8_4:-8168246 None:intergenic
TGTAACAAACAACCCAGGCT+GGG 0.590964 8_4:-8167515 None:intergenic
CTGGGAGCTCAGCTTCCGGA+AGG 0.591836 8_4:-8167497 None:intergenic
CCTGCTGTTCAACCTCGAAG+TGG 0.594990 8_4:-8165610 None:intergenic
CTACTTCCTATTATTTCAAG+GGG 0.597338 8_4:+8167947 Msa1311390:CDS
TGGAAGTTCTTACGAATGGG+TGG 0.600212 8_4:+8167671 Msa1311390:CDS
GGCATTAGTCCAGGCAAGGT+GGG 0.601187 8_4:+8165529 Msa1311390:CDS
AGTTTGCTGCCAACAATCAA+GGG 0.601829 8_4:-8160187 None:intergenic
GCCTGCCTGAACTGAAAAGG+TGG 0.608755 8_4:+8168356 Msa1311390:three_prime_UTR
ATTTGGCATTAGTCCAGGCA+AGG 0.610560 8_4:+8165525 Msa1311390:CDS
TTCGGATCATATATAGACAT+AGG 0.611176 8_4:+8164606 Msa1311390:CDS
TGAGCCTAAGATGTTCTCTG+TGG 0.612405 8_4:+8168125 Msa1311390:three_prime_UTR
ACTATAAATGGGAATGACCG+TGG 0.616670 8_4:-8167576 None:intergenic
AAGGTGGGCATTTGTAAACA+AGG 0.624666 8_4:+8165544 Msa1311390:CDS
TACACAATGGGGTCAATGAG+AGG 0.626391 8_4:-8160229 None:intergenic
CTGGAGAATAAAGGCCCTAG+AGG 0.626735 8_4:+8165682 Msa1311390:CDS
TAGTATCCTGGATTGGCCAA+AGG 0.628007 8_4:+8164490 Msa1311390:CDS
TGGCATTAGTCCAGGCAAGG+TGG 0.635723 8_4:+8165528 Msa1311390:CDS
GTGGGGCTGGAAGAACACTT+AGG 0.639853 8_4:-8167557 None:intergenic
TAAGTGTTCTTCCAGCCCCA+CGG 0.640158 8_4:+8167559 Msa1311390:CDS
CCGTTTATCATGAATCAATG+AGG 0.640950 8_4:-8168058 None:intergenic
TGAATCAATGAGGATCTGAA+AGG 0.643970 8_4:-8168048 None:intergenic
ATCAATGAGGATCTGAAAGG+AGG 0.649243 8_4:-8168045 None:intergenic
AGAAAGTAAGCTTCTAACCG+AGG 0.657953 8_4:-8167907 None:intergenic
ATAAAGGCCCTAGAGGAGAG+TGG 0.659042 8_4:+8165689 Msa1311390:CDS
TACGTACAGGATACAAGGCA+GGG 0.659380 8_4:+8164633 Msa1311390:intron
GTTAGAACGAACAACTGTTG+AGG 0.664120 8_4:+8165718 Msa1311390:CDS
GCTGTTCGTGCTCATCTCTG+CGG 0.669570 8_4:+8165752 Msa1311390:CDS
GCATTGGACCAGAATGCCAG+CGG 0.701429 8_4:-8165933 None:intergenic
GTGCATAAATGGCAACAAAG+GGG 0.706412 8_4:+8164581 Msa1311390:CDS
CAATTGATCTATACACAATG+GGG 0.707588 8_4:-8160240 None:intergenic
AAGGCCCTAGAGGAGAGTGG+CGG 0.718388 8_4:+8165692 Msa1311390:CDS
TATAAATGGGAATGACCGTG+GGG 0.731407 8_4:-8167574 None:intergenic
AGGAATGTAACAAACAACCC+AGG 0.737741 8_4:-8167520 None:intergenic
TGAGCTTCCAGAGACTTACG+AGG 0.750157 8_4:+8165891 Msa1311390:CDS
AAGTCTCTGGAAGCTCACAG+AGG 0.767051 8_4:-8165885 None:intergenic
ATGACTTGGCAACAACAACG+AGG 0.769623 8_4:-8168232 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTTATCTTCAATTT+TGG - chr8_4:8160561-8160580 None:intergenic 10.0%
!! ATTGAAGATAAATTTATTTA+AGG + chr8_4:8160563-8160582 Msa1311390:intron 10.0%
!! TTGAAGATAAATTTATTTAA+GGG + chr8_4:8160564-8160583 Msa1311390:intron 10.0%
!! TAAAAAAAATTAACAAAGTA+AGG - chr8_4:8161106-8161125 None:intergenic 10.0%
!!! TTTTTTGTTTTTTGTTTTTT+TGG - chr8_4:8162153-8162172 None:intergenic 10.0%
!! AATAAAGATAAGAAAAATAA+AGG - chr8_4:8166952-8166971 None:intergenic 10.0%
!! TTTACAAAAAATAAAAGAAA+AGG + chr8_4:8167086-8167105 Msa1311390:intron 10.0%
!! TTACAAAAAATAAAAGAAAA+GGG + chr8_4:8167087-8167106 Msa1311390:intron 10.0%
!!! TTATTTTTGTTATATTAAGA+TGG - chr8_4:8168603-8168622 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160791-8160810 None:intergenic 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160802-8160821 None:intergenic 100.0%
!! AAAAACTAAACATATACAAA+GGG - chr8_4:8160626-8160645 None:intergenic 15.0%
!!! GGATAATATTTTTTTTAAAG+AGG - chr8_4:8161078-8161097 None:intergenic 15.0%
!! ATTATAATCAATACTTCTTT+CGG + chr8_4:8161125-8161144 Msa1311390:intron 15.0%
!! CAAATATTATTAACAACTAT+GGG - chr8_4:8161387-8161406 None:intergenic 15.0%
!!! TATATTAACTTGACTAATTA+TGG - chr8_4:8161733-8161752 None:intergenic 15.0%
!! TTAAGTTATTTAATGTTAGT+TGG - chr8_4:8161810-8161829 None:intergenic 15.0%
!! ACAAAAAAATGTGTTTAAAA+AGG - chr8_4:8163033-8163052 None:intergenic 15.0%
!!! ACATTTTTTTGTTTAAATGT+TGG + chr8_4:8163041-8163060 Msa1311390:intron 15.0%
!!! AATCTCAACTTTAATTTATA+AGG - chr8_4:8164886-8164905 None:intergenic 15.0%
!! TATAAATTAAAGTTGAGATT+AGG + chr8_4:8164886-8164905 Msa1311390:intron 15.0%
!! ATAAATTAAAGTTGAGATTA+GGG + chr8_4:8164887-8164906 Msa1311390:intron 15.0%
!! TATTATAAATTCTCAATTGA+GGG - chr8_4:8164921-8164940 None:intergenic 15.0%
!!! ATTTCTTTCATTTTTCAAAA+TGG - chr8_4:8165364-8165383 None:intergenic 15.0%
!! AATAAATTTAGTTATATGTC+AGG + chr8_4:8166637-8166656 Msa1311390:intron 15.0%
!!! TTATATTTGTATGAAACTTT+TGG + chr8_4:8167199-8167218 Msa1311390:intron 15.0%
!! AAATTGTGATTACAAAATGA+GGG - chr8_4:8160412-8160431 None:intergenic 20.0%
!! CAAAAACTAAACATATACAA+AGG - chr8_4:8160627-8160646 None:intergenic 20.0%
!!! CTTTGTATATGTTTAGTTTT+TGG + chr8_4:8160625-8160644 Msa1311390:intron 20.0%
!!! CTACAAGTATATTTTTTTTG+AGG + chr8_4:8161013-8161032 Msa1311390:intron 20.0%
!! AATTAACAAAGTAAGGAATA+AGG - chr8_4:8161099-8161118 None:intergenic 20.0%
!! CCAAATATTATTAACAACTA+TGG - chr8_4:8161388-8161407 None:intergenic 20.0%
!! CCATAGTTGTTAATAATATT+TGG + chr8_4:8161385-8161404 Msa1311390:intron 20.0%
!!! TAATGAAAACAAGATTTTGT+AGG - chr8_4:8164009-8164028 None:intergenic 20.0%
!!! CTTTTCTATATTAGTATTGT+CGG + chr8_4:8164109-8164128 Msa1311390:intron 20.0%
!! TACTTTCAACTTTGAATTTA+TGG - chr8_4:8164785-8164804 None:intergenic 20.0%
!! CTATTATAAATTCTCAATTG+AGG - chr8_4:8164922-8164941 None:intergenic 20.0%
!!! TTACAAACTTTGTTTTGAAT+GGG - chr8_4:8165279-8165298 None:intergenic 20.0%
!! TAGAGTAAAACAAGAAAATT+TGG - chr8_4:8165488-8165507 None:intergenic 20.0%
!!! TATTTTTCTCAATGATGTTA+AGG + chr8_4:8165784-8165803 Msa1311390:CDS 20.0%
!! ATAGCAAAAATAACAGAATA+AGG - chr8_4:8166072-8166091 None:intergenic 20.0%
!!! AAGTTACATGAATATTTTCT+TGG + chr8_4:8166363-8166382 Msa1311390:intron 20.0%
!! AACAAAAATTTCATAGTTGT+TGG - chr8_4:8166729-8166748 None:intergenic 20.0%
!!! AAATAATTTGACTTCTAGAA+AGG + chr8_4:8167320-8167339 Msa1311390:intron 20.0%
!!! AAGATGGAATTTAATTTACA+AGG - chr8_4:8168587-8168606 None:intergenic 20.0%
! ACAATTGATCTATACACAAT+GGG - chr8_4:8160244-8160263 None:intergenic 25.0%
! AACAATTGATCTATACACAA+TGG - chr8_4:8160245-8160264 None:intergenic 25.0%
! ATTGTGTATAGATCAATTGT+TGG + chr8_4:8160244-8160263 Msa1311390:CDS 25.0%
! GAAATTGTGATTACAAAATG+AGG - chr8_4:8160413-8160432 None:intergenic 25.0%
! AACTATTCCATAACATGTTT+AGG - chr8_4:8160522-8160541 None:intergenic 25.0%
! GTTCTTAATGGAATATTTGA+CGG - chr8_4:8160714-8160733 None:intergenic 25.0%
! TTAGAGAATAATCTTAAGGT+GGG - chr8_4:8160948-8160967 None:intergenic 25.0%
! ATGCTTAGAGAATAATCTTA+AGG - chr8_4:8160952-8160971 None:intergenic 25.0%
! ATGTTATGTTAACAACCATT+TGG + chr8_4:8161225-8161244 Msa1311390:intron 25.0%
!! AATAGTGTATTTTGTCTATG+AGG - chr8_4:8161427-8161446 None:intergenic 25.0%
! TGATATTCCAACATGTATTA+TGG + chr8_4:8161638-8161657 Msa1311390:intron 25.0%
! GTTATTTAATGTTAGTTGGA+GGG - chr8_4:8161806-8161825 None:intergenic 25.0%
! AGTTATTTAATGTTAGTTGG+AGG - chr8_4:8161807-8161826 None:intergenic 25.0%
! AACAAAACAACCTAAAAACT+TGG + chr8_4:8162051-8162070 Msa1311390:intron 25.0%
!!! TTTTTTTTGTGTGATCCAAA+GGG - chr8_4:8162110-8162129 None:intergenic 25.0%
!!! TTTTTTTTTGTGTGATCCAA+AGG - chr8_4:8162111-8162130 None:intergenic 25.0%
! AACAACAACAAATGAAACAA+AGG - chr8_4:8162229-8162248 None:intergenic 25.0%
! ACTGTTGGATTTATATCAAA+TGG + chr8_4:8162523-8162542 Msa1311390:intron 25.0%
!! ATGGATTACTTTATCTTGTA+AGG + chr8_4:8162542-8162561 Msa1311390:intron 25.0%
!!! GATAGGATTGTTTTGATTTT+GGG + chr8_4:8162856-8162875 Msa1311390:intron 25.0%
!!! ATAGGATTGTTTTGATTTTG+GGG + chr8_4:8162857-8162876 Msa1311390:intron 25.0%
! AATGTGTTTAAAAAGGACTA+AGG - chr8_4:8163026-8163045 None:intergenic 25.0%
!! TTAGGCTCTTAACATTTTAT+AGG + chr8_4:8163192-8163211 Msa1311390:intron 25.0%
!! TAGGCTCTTAACATTTTATA+GGG + chr8_4:8163193-8163212 Msa1311390:intron 25.0%
! GATACAATATTTAGTACACA+TGG - chr8_4:8163363-8163382 None:intergenic 25.0%
! GTGTACTAAATATTGTATCA+CGG + chr8_4:8163364-8163383 Msa1311390:intron 25.0%
! GATTCATGTAATTTAGATGT+TGG + chr8_4:8163484-8163503 Msa1311390:intron 25.0%
!!! CTCATTTTCTGTCTTTAAAA+TGG - chr8_4:8163766-8163785 None:intergenic 25.0%
!!! TATAAAGTGTTGTCAAATTG+CGG + chr8_4:8164179-8164198 Msa1311390:intron 25.0%
! AAATAATGTTCTATGAAGTG+GGG - chr8_4:8164372-8164391 None:intergenic 25.0%
! GAAATAATGTTCTATGAAGT+GGG - chr8_4:8164373-8164392 None:intergenic 25.0%
! TGAAATAATGTTCTATGAAG+TGG - chr8_4:8164374-8164393 None:intergenic 25.0%
! AATGAGTTGTGATTATGTTA+AGG + chr8_4:8164670-8164689 Msa1311390:CDS 25.0%
! AAATTCAAAGAACACTGAAT+TGG - chr8_4:8165184-8165203 None:intergenic 25.0%
! TTAATTACACAATCATTCAG+AGG + chr8_4:8165211-8165230 Msa1311390:intron 25.0%
!!! GTTACAAACTTTGTTTTGAA+TGG - chr8_4:8165280-8165299 None:intergenic 25.0%
! CAAAACAAAGTTTGTAACAT+TGG + chr8_4:8165282-8165301 Msa1311390:intron 25.0%
!! AAGAAATTTTCCACTATTTC+TGG + chr8_4:8165377-8165396 Msa1311390:intron 25.0%
!!! AGAAATTTTCCACTATTTCT+GGG + chr8_4:8165378-8165397 Msa1311390:intron 25.0%
!!! TCTTGTTTTACTCTAATTGA+AGG + chr8_4:8165493-8165512 Msa1311390:intron 25.0%
!!! CTTGTTTTACTCTAATTGAA+GGG + chr8_4:8165494-8165513 Msa1311390:intron 25.0%
!! AGTTGAATTCTTTTGAATCT+AGG + chr8_4:8166031-8166050 Msa1311390:intron 25.0%
!!! CTGACTTTAAAATACTTACA+GGG - chr8_4:8166131-8166150 None:intergenic 25.0%
!!! TCTGACTTTAAAATACTTAC+AGG - chr8_4:8166132-8166151 None:intergenic 25.0%
! ATGCTAATAATAATCACAAC+AGG - chr8_4:8166254-8166273 None:intergenic 25.0%
! ACATTCAGATTTGTATAAGA+AGG + chr8_4:8166301-8166320 Msa1311390:intron 25.0%
!!! TTTTAACCTCCATTTTTTTC+CGG - chr8_4:8166698-8166717 None:intergenic 25.0%
! TACGTCTCAAATTACATTAA+CGG + chr8_4:8166836-8166855 Msa1311390:intron 25.0%
! AACATCTGAATCTAACAATT+AGG - chr8_4:8167026-8167045 None:intergenic 25.0%
! ATGATTGAATTCTATTTGTC+AGG + chr8_4:8167362-8167381 Msa1311390:intron 25.0%
! AAGTTTAATGCAATGATATC+CGG + chr8_4:8167636-8167655 Msa1311390:CDS 25.0%
!!! ATTTATTTTGTTAACTGCCT+CGG + chr8_4:8167890-8167909 Msa1311390:CDS 25.0%
! TTCTACTTCCTATTATTTCA+AGG + chr8_4:8167945-8167964 Msa1311390:CDS 25.0%
! TCTACTTCCTATTATTTCAA+GGG + chr8_4:8167946-8167965 Msa1311390:CDS 25.0%
! AAATAAGTATGTTCCAAGAT+AGG - chr8_4:8168105-8168124 None:intergenic 25.0%
! AACTTATAAAGCATATGACT+TGG - chr8_4:8168249-8168268 None:intergenic 25.0%
! AGAACTGTATATTGCTTTAT+AGG - chr8_4:8168334-8168353 None:intergenic 25.0%
!!! TTGTTATTCATCCATTTTTG+TGG + chr8_4:8168528-8168547 Msa1311390:three_prime_UTR 25.0%
! GATGAAAATAACCACAAAAA+TGG - chr8_4:8168542-8168561 None:intergenic 25.0%
CAATTGATCTATACACAATG+GGG - chr8_4:8160243-8160262 None:intergenic 30.0%
GAGTAACTTCAAACTAAGTA+AGG - chr8_4:8160318-8160337 None:intergenic 30.0%
! TGTTTAGGATTTCGAGTAAA+TGG - chr8_4:8160507-8160526 None:intergenic 30.0%
TCGAAATCCTAAACATGTTA+TGG + chr8_4:8160512-8160531 Msa1311390:intron 30.0%
GTGGGTATTTATAGTTTACT+TGG - chr8_4:8160930-8160949 None:intergenic 30.0%
CTTAGAGAATAATCTTAAGG+TGG - chr8_4:8160949-8160968 None:intergenic 30.0%
! GAGTGCAATATTGATAACTA+GGG - chr8_4:8160992-8161011 None:intergenic 30.0%
! TGAGTGCAATATTGATAACT+AGG - chr8_4:8160993-8161012 None:intergenic 30.0%
ATCAGATCCATAATACATGT+TGG - chr8_4:8161648-8161667 None:intergenic 30.0%
CTTTGGTAAGTAAAAGAGTA+GGG - chr8_4:8161977-8161996 None:intergenic 30.0%
!!! GTGTGTCTGTTTTTTTACAA+GGG - chr8_4:8162022-8162041 None:intergenic 30.0%
!!! AGGTTGTTTTGTTTCTTCTT+TGG - chr8_4:8162044-8162063 None:intergenic 30.0%
! AAAGTAGGAACCAAGTTTTT+AGG - chr8_4:8162064-8162083 None:intergenic 30.0%
GAATGCTATAATTGGAAAGT+AGG - chr8_4:8162079-8162098 None:intergenic 30.0%
AAAGGAGAGAATGCTATAAT+TGG - chr8_4:8162087-8162106 None:intergenic 30.0%
CATTCTTGAAACTCGTAATT+TGG - chr8_4:8162274-8162293 None:intergenic 30.0%
CAAATTACGAGTTTCAAGAA+TGG + chr8_4:8162272-8162291 Msa1311390:intron 30.0%
!! GATTAGGGTGTTTTTAATTG+TGG + chr8_4:8162633-8162652 Msa1311390:intron 30.0%
!! GAGTTGGTTGCATATTTTAA+AGG + chr8_4:8162676-8162695 Msa1311390:intron 30.0%
!! ATTTTAAAGGCTGGCATTTT+AGG + chr8_4:8162689-8162708 Msa1311390:intron 30.0%
TGATATTCGGGCAAATTATT+TGG + chr8_4:8162774-8162793 Msa1311390:intron 30.0%
!!! GGATAGGATTGTTTTGATTT+TGG + chr8_4:8162855-8162874 Msa1311390:intron 30.0%
!!! TTTTGATTTTGGGGTGTTTT+TGG + chr8_4:8162866-8162885 Msa1311390:intron 30.0%
AGATTCCTATGTGTAATGAA+AGG + chr8_4:8162980-8162999 Msa1311390:intron 30.0%
GATTCCTATGTGTAATGAAA+GGG + chr8_4:8162981-8163000 Msa1311390:intron 30.0%
!! CGGCTAAATGGATTAAATTA+CGG - chr8_4:8163086-8163105 None:intergenic 30.0%
! GTTTTTGTGATTCATGCTTT+AGG + chr8_4:8163174-8163193 Msa1311390:intron 30.0%
! AGGCTCTTAACATTTTATAG+GGG + chr8_4:8163194-8163213 Msa1311390:intron 30.0%
TACACATGGTTATCAAATAG+CGG - chr8_4:8163349-8163368 None:intergenic 30.0%
ATATTGTATCACGGAACAAT+AGG + chr8_4:8163373-8163392 Msa1311390:intron 30.0%
TATTGTATCACGGAACAATA+GGG + chr8_4:8163374-8163393 Msa1311390:intron 30.0%
TCATGTAATTTAGATGTTGG+TGG + chr8_4:8163487-8163506 Msa1311390:intron 30.0%
GTGGTAAGTAGTATTTACAT+GGG + chr8_4:8163506-8163525 Msa1311390:intron 30.0%
TGGTAAGTAGTATTTACATG+GGG + chr8_4:8163507-8163526 Msa1311390:intron 30.0%
!!! TTGTGGTTGTTTTAAAGAGT+AGG + chr8_4:8163812-8163831 Msa1311390:intron 30.0%
! AAGTATTATGATGAAAGCAC+AGG - chr8_4:8163851-8163870 None:intergenic 30.0%
AGACAGAATAAATGTACAAG+TGG + chr8_4:8163924-8163943 Msa1311390:intron 30.0%
AGAGGAGAAAATTATAGAGT+TGG - chr8_4:8164079-8164098 None:intergenic 30.0%
TAGAAAAGAGACAAGAATAG+AGG - chr8_4:8164097-8164116 None:intergenic 30.0%
TATATTAGTATTGTCGGTAG+TGG + chr8_4:8164115-8164134 Msa1311390:intron 30.0%
! CAAGTATTGTTGTGATTGAA+AGG + chr8_4:8164285-8164304 Msa1311390:intron 30.0%
AGATATCCAAAACCTTATCA+AGG + chr8_4:8164553-8164572 Msa1311390:CDS 30.0%
TTCGGATCATATATAGACAT+AGG + chr8_4:8164606-8164625 Msa1311390:CDS 30.0%
TGTTAAGGATTATGACTTTG+TGG + chr8_4:8164685-8164704 Msa1311390:CDS 30.0%
! TTCTTTAAGAAATCTGGTGT+TGG - chr8_4:8164734-8164753 None:intergenic 30.0%
! ATCGTCTTCTTTAAGAAATC+TGG - chr8_4:8164740-8164759 None:intergenic 30.0%
ATTAAAGTTGAGATTAGGGA+AGG + chr8_4:8164891-8164910 Msa1311390:intron 30.0%
TAAAAAACAAACGACACAGA+TGG - chr8_4:8164995-8165014 None:intergenic 30.0%
GTGAATTACACTATCAACTA+AGG - chr8_4:8165405-8165424 None:intergenic 30.0%
! TTTTACTCTAATTGAAGGGA+AGG + chr8_4:8165498-8165517 Msa1311390:intron 30.0%
TTTACTCTAATTGAAGGGAA+GGG + chr8_4:8165499-8165518 Msa1311390:intron 30.0%
!! GGTATCTTTATTGACTTCTT+TGG + chr8_4:8165638-8165657 Msa1311390:CDS 30.0%
! ATTGACTTCTTTGGTTTCAA+TGG + chr8_4:8165647-8165666 Msa1311390:CDS 30.0%
GTGCTATATTTCAAATCTTG+AGG + chr8_4:8165808-8165827 Msa1311390:intron 30.0%
! TGTCTTTCAACACCAATTTT+TGG + chr8_4:8166167-8166186 Msa1311390:intron 30.0%
AGTCACTTACTAAAATACAC+AGG + chr8_4:8166218-8166237 Msa1311390:intron 30.0%
TAAGTTATTAACCCTTCATC+AGG - chr8_4:8166438-8166457 None:intergenic 30.0%
! TTGATAACAAATTGAACAGC+AGG - chr8_4:8166565-8166584 None:intergenic 30.0%
! GTAGTATGTTTTCAATTTCC+CGG + chr8_4:8166676-8166695 Msa1311390:intron 30.0%
TTCAATTTCCCGGAAAAAAA+TGG + chr8_4:8166686-8166705 Msa1311390:intron 30.0%
!!! TTTAACCTCCATTTTTTTCC+GGG - chr8_4:8166697-8166716 None:intergenic 30.0%
! TTTGTGAACTGTGCAATTTT+TGG + chr8_4:8166748-8166767 Msa1311390:intron 30.0%
ATTAATGAAAACGCATGGAA+GGG + chr8_4:8166798-8166817 Msa1311390:intron 30.0%
ATTACATTAACGGAGCAATT+AGG + chr8_4:8166846-8166865 Msa1311390:intron 30.0%
!! TCACAATGTTCTCTAGAATA+AGG + chr8_4:8167053-8167072 Msa1311390:intron 30.0%
CATACAATGAATGAAGTATG+TGG - chr8_4:8167271-8167290 None:intergenic 30.0%
ATTCTATTTGTCAGGTTAGT+TGG + chr8_4:8167370-8167389 Msa1311390:intron 30.0%
! TTCTATTTGTCAGGTTAGTT+GGG + chr8_4:8167371-8167390 Msa1311390:intron 30.0%
! GAAGATAAGGCACTATAAAT+GGG - chr8_4:8167590-8167609 None:intergenic 30.0%
! AGAAGATAAGGCACTATAAA+TGG - chr8_4:8167591-8167610 None:intergenic 30.0%
GTGTTCTCAAATAGAAGATA+AGG - chr8_4:8167603-8167622 None:intergenic 30.0%
TGGTTACAAAAAAACTAGGA+AGG + chr8_4:8167691-8167710 Msa1311390:CDS 30.0%
CTACTTCCTATTATTTCAAG+GGG + chr8_4:8167947-8167966 Msa1311390:CDS 30.0%
AACTTACCCCTTGAAATAAT+AGG - chr8_4:8167956-8167975 None:intergenic 30.0%
!! CCTCATTGATTCATGATAAA+CGG + chr8_4:8168058-8168077 Msa1311390:three_prime_UTR 30.0%
TATGTTCCAAGATAGGTTTA+AGG - chr8_4:8168098-8168117 None:intergenic 30.0%
!! AAAGTTGTTTCAGTTCTGAA+TGG + chr8_4:8168274-8168293 Msa1311390:three_prime_UTR 30.0%
TGAAAACATGCTAACAATCT+TGG - chr8_4:8168508-8168527 None:intergenic 30.0%
GACTTCACAGTTAGCTAAAT+TGG - chr8_4:8160367-8160386 None:intergenic 35.0%
TGATTACAAAATGAGGGAGA+AGG - chr8_4:8160406-8160425 None:intergenic 35.0%
GTGGTTAGATATGAAGTTGA+CGG - chr8_4:8160652-8160671 None:intergenic 35.0%
TTCCACTCTAACTAGACTTA+GGG + chr8_4:8160882-8160901 Msa1311390:intron 35.0%
GCTTTGGTAAGTAAAAGAGT+AGG - chr8_4:8161978-8161997 None:intergenic 35.0%
!!! CTGTTTTTTTACAAGGGAGA+AGG - chr8_4:8162016-8162035 None:intergenic 35.0%
!!! GGTGTGTCTGTTTTTTTACA+AGG - chr8_4:8162023-8162042 None:intergenic 35.0%
! AAAGGTGTGAAGAAAGTGTA+AGG - chr8_4:8162211-8162230 None:intergenic 35.0%
ATTACGAGTTTCAAGAATGG+TGG + chr8_4:8162275-8162294 Msa1311390:intron 35.0%
GTAACATCAACGGATACAAA+TGG - chr8_4:8162376-8162395 None:intergenic 35.0%
TTTGTATCCGTTGATGTTAC+CGG + chr8_4:8162376-8162395 Msa1311390:intron 35.0%
! TTTTCACAGATCCATCTGAA+CGG - chr8_4:8162435-8162454 None:intergenic 35.0%
AAGTGCAAGACAGTTATCAT+GGG + chr8_4:8162468-8162487 Msa1311390:intron 35.0%
!! TAGGGTGTTTTTAATTGTGG+TGG + chr8_4:8162636-8162655 Msa1311390:intron 35.0%
!! GTGTTTTTAATTGTGGTGGT+TGG + chr8_4:8162640-8162659 Msa1311390:intron 35.0%
!! TGGTTGCATATTTTAAAGGC+TGG + chr8_4:8162680-8162699 Msa1311390:intron 35.0%
ATATTCGTCAAACTCTGCAA+AGG - chr8_4:8162805-8162824 None:intergenic 35.0%
!!! GGTGTTTTTGGATCAAGTTT+AGG + chr8_4:8162878-8162897 Msa1311390:intron 35.0%
!! GTTTTTGGATCAAGTTTAGG+AGG + chr8_4:8162881-8162900 Msa1311390:intron 35.0%
! CTAGTGTGGATTATGATGAT+GGG + chr8_4:8162917-8162936 Msa1311390:intron 35.0%
!!! GATGGATTATCCTATGGTTT+TGG + chr8_4:8162954-8162973 Msa1311390:intron 35.0%
!! TAAGGCTTTGTTGTTGTTGT+TGG + chr8_4:8163122-8163141 Msa1311390:intron 35.0%
AATCTTGTGCTAGAGTAGAA+GGG + chr8_4:8163234-8163253 Msa1311390:intron 35.0%
GGTGGTAAGTAGTATTTACA+TGG + chr8_4:8163505-8163524 Msa1311390:intron 35.0%
TTGCAGATGGGAAAATGAAA+GGG + chr8_4:8163650-8163669 Msa1311390:intron 35.0%
AAAATGAGAGAACATTGCTG+TGG + chr8_4:8163778-8163797 Msa1311390:intron 35.0%
!!! GGTTGTTTTAAAGAGTAGGT+AGG + chr8_4:8163816-8163835 Msa1311390:intron 35.0%
AGAGTTGGCATGAAACAAAA+GGG - chr8_4:8164064-8164083 None:intergenic 35.0%
TAGAGTTGGCATGAAACAAA+AGG - chr8_4:8164065-8164084 None:intergenic 35.0%
CATGTGTCACATAACAATAG+CGG - chr8_4:8164153-8164172 None:intergenic 35.0%
AAAATCAATGCTGTCAACCA+CGG - chr8_4:8164257-8164276 None:intergenic 35.0%
! TTTTCTCGCTGTTGTACAAT+AGG + chr8_4:8164442-8164461 Msa1311390:intron 35.0%
! TGTACAAGTCCTTGATGATT+CGG + chr8_4:8164523-8164542 Msa1311390:CDS 35.0%
AAGTGCATAAATGGCAACAA+AGG + chr8_4:8164579-8164598 Msa1311390:CDS 35.0%
AGTGCATAAATGGCAACAAA+GGG + chr8_4:8164580-8164599 Msa1311390:CDS 35.0%
! GAAGACGATACCTTATTTCA+AGG + chr8_4:8164751-8164770 Msa1311390:CDS 35.0%
!! GGACTTGTTACCTTGAAATA+AGG - chr8_4:8164764-8164783 None:intergenic 35.0%
! ACCTACCAATTGCAGAATTT+TGG + chr8_4:8164954-8164973 Msa1311390:intron 35.0%
! CCTACCAATTGCAGAATTTT+GGG + chr8_4:8164955-8164974 Msa1311390:intron 35.0%
GATTCCCAAAATTCTGCAAT+TGG - chr8_4:8164962-8164981 None:intergenic 35.0%
TGCAGAATCTTCACATACTT+TGG + chr8_4:8165088-8165107 Msa1311390:intron 35.0%
TGAGTCACTTATGTAACTTG+AGG - chr8_4:8165341-8165360 None:intergenic 35.0%
!! TTGATAGTGTAATTCACCCA+AGG + chr8_4:8165408-8165427 Msa1311390:intron 35.0%
CGTTGCAGTTTATAATCCTT+GGG - chr8_4:8165427-8165446 None:intergenic 35.0%
ACGTTGCAGTTTATAATCCT+TGG - chr8_4:8165428-8165447 None:intergenic 35.0%
CACATACGAAACAATTGCAT+TGG - chr8_4:8165952-8165971 None:intergenic 35.0%
TGTTGATGTACTTCGTTCAA+AGG + chr8_4:8165975-8165994 Msa1311390:CDS 35.0%
!! CTTTCAACACCAATTTTTGG+TGG + chr8_4:8166170-8166189 Msa1311390:intron 35.0%
CAAATCTTGCCACCAAAAAT+TGG - chr8_4:8166182-8166201 None:intergenic 35.0%
!! ATAAGAAGGCGTTGATTCAA+TGG + chr8_4:8166315-8166334 Msa1311390:intron 35.0%
ACTTATTAGTGACCTGATGA+AGG + chr8_4:8166423-8166442 Msa1311390:intron 35.0%
CTTATTAGTGACCTGATGAA+GGG + chr8_4:8166424-8166443 Msa1311390:intron 35.0%
GTCAGGCAAGACAATATTAT+AGG + chr8_4:8166654-8166673 Msa1311390:intron 35.0%
AATTTCCCGGAAAAAAATGG+AGG + chr8_4:8166689-8166708 Msa1311390:intron 35.0%
! CATGCGTTTTCATTAATGCA+GGG - chr8_4:8166795-8166814 None:intergenic 35.0%
CATTAATGAAAACGCATGGA+AGG + chr8_4:8166797-8166816 Msa1311390:intron 35.0%
TTAATGAAAACGCATGGAAG+GGG + chr8_4:8166799-8166818 Msa1311390:intron 35.0%
TCTAAACTGTTGTGGAATAG+TGG + chr8_4:8166910-8166929 Msa1311390:intron 35.0%
! TTGTCGTTGATTACTTCATG+CGG - chr8_4:8167128-8167147 None:intergenic 35.0%
AAGGCATATGAGCATTTCAA+TGG - chr8_4:8167225-8167244 None:intergenic 35.0%
ATGCCTTGTATATGCTTACA+CGG + chr8_4:8167238-8167257 Msa1311390:intron 35.0%
ATACCGTGTAAGCATATACA+AGG - chr8_4:8167244-8167263 None:intergenic 35.0%
CATTCATTGTATGCAATGCT+TGG + chr8_4:8167278-8167297 Msa1311390:intron 35.0%
! TCTTTCTTTTCTTCCTTCTG+AGG + chr8_4:8167412-8167431 Msa1311390:CDS 35.0%
! AAGAGCGTGAACGAATAAAA+TGG - chr8_4:8167450-8167469 None:intergenic 35.0%
ATATCCGGATTATTTCGCTT+TGG + chr8_4:8167651-8167670 Msa1311390:CDS 35.0%
ACTTCCAAAGCGAAATAATC+CGG - chr8_4:8167658-8167677 None:intergenic 35.0%
! CTTTGGAAGTTCTTACGAAT+GGG + chr8_4:8167668-8167687 Msa1311390:CDS 35.0%
TGGGTGGTTACAAAAAAACT+AGG + chr8_4:8167687-8167706 Msa1311390:CDS 35.0%
! AGATTTGGTTGCCTATGAAA+AGG + chr8_4:8167725-8167744 Msa1311390:CDS 35.0%
ATTAGATCGCATTAGAGGTT+CGG - chr8_4:8167754-8167773 None:intergenic 35.0%
AGACTATTAGATCGCATTAG+AGG - chr8_4:8167759-8167778 None:intergenic 35.0%
!! AGACGATTTTTCTTGGTCTT+TGG - chr8_4:8167846-8167865 None:intergenic 35.0%
!! GTTGTTGGTCTTGATTTGAT+TGG + chr8_4:8167981-8168000 Msa1311390:CDS 35.0%
! GTTTTGCATCCACTAAAAGT+TGG - chr8_4:8168026-8168045 None:intergenic 35.0%
TGAATCAATGAGGATCTGAA+AGG - chr8_4:8168051-8168070 None:intergenic 35.0%
CCGTTTATCATGAATCAATG+AGG - chr8_4:8168061-8168080 None:intergenic 35.0%
TTCATGATAAACGGTCACAA+TGG + chr8_4:8168067-8168086 Msa1311390:three_prime_UTR 35.0%
TCATGATAAACGGTCACAAT+GGG + chr8_4:8168068-8168087 Msa1311390:three_prime_UTR 35.0%
AAAACCACAGAGAACATCTT+AGG - chr8_4:8168132-8168151 None:intergenic 35.0%
! TAAGATGTTCTCTGTGGTTT+TGG + chr8_4:8168131-8168150 Msa1311390:three_prime_UTR 35.0%
!! GCAACTGATTTGCTGTAAAT+TGG - chr8_4:8168160-8168179 None:intergenic 35.0%
AGCAAACAGTACTGCAAATT+CGG - chr8_4:8168192-8168211 None:intergenic 35.0%
GTTATTGAGACACAGATTTC+TGG + chr8_4:8168476-8168495 Msa1311390:three_prime_UTR 35.0%
ACAATCAAGGGAGATGGAAT+AGG - chr8_4:8160178-8160197 None:intergenic 40.0%
ATTCCATCTCCCTTGATTGT+TGG + chr8_4:8160178-8160197 Msa1311390:CDS 40.0%
!! AGTTTGCTGCCAACAATCAA+GGG - chr8_4:8160190-8160209 None:intergenic 40.0%
!! AAGTTTGCTGCCAACAATCA+AGG - chr8_4:8160191-8160210 None:intergenic 40.0%
GAGAGGTTCATAACCATCTT+TGG - chr8_4:8160215-8160234 None:intergenic 40.0%
TTTAGCTAACTGTGAAGTCG+AGG + chr8_4:8160368-8160387 Msa1311390:intron 40.0%
GTGAAGTCGAGGTCTATTTA+AGG + chr8_4:8160379-8160398 Msa1311390:intron 40.0%
! GAGGGTTAGTGAGTTCTTAA+TGG - chr8_4:8160726-8160745 None:intergenic 40.0%
AGATACGCTATAGGTGGTTT+CGG - chr8_4:8160822-8160841 None:intergenic 40.0%
AAACCACCTATAGCGTATCT+TGG + chr8_4:8160822-8160841 Msa1311390:intron 40.0%
AACCACCTATAGCGTATCTT+GGG + chr8_4:8160823-8160842 Msa1311390:intron 40.0%
CTAAGTCTAGTTAGAGTGGA+AGG - chr8_4:8160883-8160902 None:intergenic 40.0%
CTTCCACTCTAACTAGACTT+AGG + chr8_4:8160881-8160900 Msa1311390:intron 40.0%
TACGTTGTTCGACAACCAAA+TGG - chr8_4:8161243-8161262 None:intergenic 40.0%
GGATGACTTCACTTCAATCA+AGG - chr8_4:8161875-8161894 None:intergenic 40.0%
AGTGAGGAGATTCATGTGAT+GGG - chr8_4:8161896-8161915 None:intergenic 40.0%
AAGGAAAGACAGAGGTAGAT+GGG - chr8_4:8161933-8161952 None:intergenic 40.0%
TAAGGAAAGACAGAGGTAGA+TGG - chr8_4:8161934-8161953 None:intergenic 40.0%
TGGTAAGTAAAAGAGTAGGG+TGG - chr8_4:8161974-8161993 None:intergenic 40.0%
TTTGTGTGATCCAAAGGGAA+AGG - chr8_4:8162105-8162124 None:intergenic 40.0%
GAAGTGCAAGACAGTTATCA+TGG + chr8_4:8162467-8162486 Msa1311390:intron 40.0%
!! ATTGTGGTGGTTGGTTTGTT+AGG + chr8_4:8162649-8162668 Msa1311390:intron 40.0%
!! TTGTGGTGGTTGGTTTGTTA+GGG + chr8_4:8162650-8162669 Msa1311390:intron 40.0%
!! TGGTTTGTTAGGGTTTGAGT+TGG + chr8_4:8162660-8162679 Msa1311390:intron 40.0%
GGATCAAGTTTAGGAGGATT+AGG + chr8_4:8162887-8162906 Msa1311390:intron 40.0%
TCATAATCCACACTAGCAAC+AGG - chr8_4:8162913-8162932 None:intergenic 40.0%
! GCTAGTGTGGATTATGATGA+TGG + chr8_4:8162916-8162935 Msa1311390:intron 40.0%
!! GAGTGTGATGGATTATCCTA+TGG + chr8_4:8162948-8162967 Msa1311390:intron 40.0%
GGAATCTGAACCAAAACCAT+AGG - chr8_4:8162967-8162986 None:intergenic 40.0%
TCCTATGTGTAATGAAAGGG+AGG + chr8_4:8162984-8163003 Msa1311390:intron 40.0%
ACCTCCCTTTCATTACACAT+AGG - chr8_4:8162988-8163007 None:intergenic 40.0%
AAAGGGAGGTAAGAACATGT+AGG + chr8_4:8162998-8163017 Msa1311390:intron 40.0%
! AAAGCCTTATCCCACTAAGT+GGG - chr8_4:8163111-8163130 None:intergenic 40.0%
!!! TGGTGCTGCTGATTTTTGTT+AGG + chr8_4:8163142-8163161 Msa1311390:intron 40.0%
TCTAGCACAAGATTCACAGA+AGG - chr8_4:8163228-8163247 None:intergenic 40.0%
GAATCTTGTGCTAGAGTAGA+AGG + chr8_4:8163233-8163252 Msa1311390:intron 40.0%
!! CTTGTTAGTGTTTTGAACCG+CGG + chr8_4:8163269-8163288 Msa1311390:intron 40.0%
TTGTCAAATAGCAGCTACAC+TGG - chr8_4:8163460-8163479 None:intergenic 40.0%
AGCACACACTCAACTCATTA+AGG - chr8_4:8163541-8163560 None:intergenic 40.0%
!! TGTGTGCTCAAGTGTTTTTG+TGG + chr8_4:8163553-8163572 Msa1311390:intron 40.0%
TTTGTGGCTTGAATGTGTTG+TGG + chr8_4:8163569-8163588 Msa1311390:intron 40.0%
! AGAGCTTTGTAACTTGCAGA+TGG + chr8_4:8163637-8163656 Msa1311390:intron 40.0%
! GAGCTTTGTAACTTGCAGAT+GGG + chr8_4:8163638-8163657 Msa1311390:intron 40.0%
CTTGCAGATGGGAAAATGAA+AGG + chr8_4:8163649-8163668 Msa1311390:intron 40.0%
TTAAAGAGTAGGTAGGCAGT+AGG + chr8_4:8163823-8163842 Msa1311390:intron 40.0%
AGTGACAACGGTGATAAGAA+GGG - chr8_4:8164318-8164337 None:intergenic 40.0%
TAGTGACAACGGTGATAAGA+AGG - chr8_4:8164319-8164338 None:intergenic 40.0%
AATGTTCTATGAAGTGGGGT+TGG - chr8_4:8164368-8164387 None:intergenic 40.0%
!! TAACTGCTGCAATGGATTGA+TGG - chr8_4:8164472-8164491 None:intergenic 40.0%
TGTACAAGCATTCTCTCCTT+TGG - chr8_4:8164509-8164528 None:intergenic 40.0%
CTACTTCATCCGAATCATCA+AGG - chr8_4:8164535-8164554 None:intergenic 40.0%
! CTTCTGCCTTGATAAGGTTT+TGG - chr8_4:8164562-8164581 None:intergenic 40.0%
TATGCACTTCTGCCTTGATA+AGG - chr8_4:8164568-8164587 None:intergenic 40.0%
! TCAAGGCAGAAGTGCATAAA+TGG + chr8_4:8164570-8164589 Msa1311390:CDS 40.0%
GTGCATAAATGGCAACAAAG+GGG + chr8_4:8164581-8164600 Msa1311390:CDS 40.0%
AGACATAGGCTTATACGTAC+AGG + chr8_4:8164620-8164639 Msa1311390:intron 40.0%
GCTTATACGTACAGGATACA+AGG + chr8_4:8164628-8164647 Msa1311390:intron 40.0%
!! TTAAGAAATCTGGTGTTGGC+TGG - chr8_4:8164730-8164749 None:intergenic 40.0%
CCCAAAATTCTGCAATTGGT+AGG - chr8_4:8164958-8164977 None:intergenic 40.0%
ATGGGAGAATAGTAGATGAC+AGG - chr8_4:8165261-8165280 None:intergenic 40.0%
AACTAAGGTCCCAGAAATAG+TGG - chr8_4:8165390-8165409 None:intergenic 40.0%
ATTGAAGGGAAGGGATGATT+TGG + chr8_4:8165508-8165527 Msa1311390:intron 40.0%
AAGGTGGGCATTTGTAAACA+AGG + chr8_4:8165544-8165563 Msa1311390:CDS 40.0%
CAATTTATCGTTCCACTTCG+AGG + chr8_4:8165598-8165617 Msa1311390:CDS 40.0%
! TTTGGTTTCAATGGAACTGC+TGG + chr8_4:8165656-8165675 Msa1311390:CDS 40.0%
GTTAGAACGAACAACTGTTG+AGG + chr8_4:8165718-8165737 Msa1311390:CDS 40.0%
ATAAAAAACAACAGCACCGC+TGG + chr8_4:8165917-8165936 Msa1311390:CDS 40.0%
TTTGGTCTGAGTAGTGTTCA+TGG + chr8_4:8166766-8166785 Msa1311390:intron 40.0%
! CCATGCGTTTTCATTAATGC+AGG - chr8_4:8166796-8166815 None:intergenic 40.0%
CCTGCATTAATGAAAACGCA+TGG + chr8_4:8166793-8166812 Msa1311390:intron 40.0%
TGAGACGTATTAAGTTCCTC+CGG - chr8_4:8166825-8166844 None:intergenic 40.0%
AGATGCTGTCTAAACTGTTG+TGG + chr8_4:8166902-8166921 Msa1311390:intron 40.0%
AGGAATGTAACAAACAACCC+AGG - chr8_4:8167523-8167542 None:intergenic 40.0%
! TGGGTTGTTTGTTACATTCC+TGG + chr8_4:8167522-8167541 Msa1311390:CDS 40.0%
TATAAATGGGAATGACCGTG+GGG - chr8_4:8167577-8167596 None:intergenic 40.0%
CTATAAATGGGAATGACCGT+GGG - chr8_4:8167578-8167597 None:intergenic 40.0%
ACTATAAATGGGAATGACCG+TGG - chr8_4:8167579-8167598 None:intergenic 40.0%
!! GCTTTGGAAGTTCTTACGAA+TGG + chr8_4:8167667-8167686 Msa1311390:CDS 40.0%
AAGGTCATCAGAGACAGATT+TGG + chr8_4:8167710-8167729 Msa1311390:CDS 40.0%
! AGGTTCGGATTCCTTTTCAT+AGG - chr8_4:8167739-8167758 None:intergenic 40.0%
CATAGATCTTCCTCAGATTC+AGG + chr8_4:8167780-8167799 Msa1311390:CDS 40.0%
CTCTTCAATACCTGAATCTG+AGG - chr8_4:8167793-8167812 None:intergenic 40.0%
! CCTGTAGAGACGATTTTTCT+TGG - chr8_4:8167853-8167872 None:intergenic 40.0%
CCAAGAAAAATCGTCTCTAC+AGG + chr8_4:8167850-8167869 Msa1311390:CDS 40.0%
AGAAAGTAAGCTTCTAACCG+AGG - chr8_4:8167910-8167929 None:intergenic 40.0%
AGAAGCTTACTTTCTGCTCA+AGG + chr8_4:8167915-8167934 Msa1311390:CDS 40.0%
!! GGGGTAAGTTTTCTTGTTGT+TGG + chr8_4:8167966-8167985 Msa1311390:CDS 40.0%
! TCTTGATTTGATTGGAGAGC+AGG + chr8_4:8167989-8168008 Msa1311390:CDS 40.0%
! AGTTGAGCTCCAACTTTTAG+TGG + chr8_4:8168014-8168033 Msa1311390:exon 40.0%
ATCAATGAGGATCTGAAAGG+AGG - chr8_4:8168048-8168067 None:intergenic 40.0%
GGCAAACCTTAAACCTATCT+TGG + chr8_4:8168089-8168108 Msa1311390:three_prime_UTR 40.0%
! AATGTGTCGACACTTGAAGA+AGG + chr8_4:8168300-8168319 Msa1311390:three_prime_UTR 40.0%
! ATGTGTCGACACTTGAAGAA+GGG + chr8_4:8168301-8168320 Msa1311390:three_prime_UTR 40.0%
! AATCTCCACCTTTTCAGTTC+AGG - chr8_4:8168364-8168383 None:intergenic 40.0%
GGCAGCAAACTTTCCAAAGA+TGG + chr8_4:8160199-8160218 Msa1311390:CDS 45.0%
TACACAATGGGGTCAATGAG+AGG - chr8_4:8160232-8160251 None:intergenic 45.0%
AGTCTTGAGACAAGGCAAAG+TGG - chr8_4:8160671-8160690 None:intergenic 45.0%
TTGTCTCAAGACTCGTGCTT+GGG + chr8_4:8160678-8160697 Msa1311390:intron 45.0%
GAACTCACTAACCCTCTACA+AGG + chr8_4:8160730-8160749 Msa1311390:intron 45.0%
GACTCACTGACCTTCCTTAA+GGG + chr8_4:8160752-8160771 Msa1311390:intron 45.0%
ATACGCTATAGGTGGTTTCG+GGG - chr8_4:8160820-8160839 None:intergenic 45.0%
GATACGCTATAGGTGGTTTC+GGG - chr8_4:8160821-8160840 None:intergenic 45.0%
ACCACCTATAGCGTATCTTG+GGG + chr8_4:8160824-8160843 Msa1311390:intron 45.0%
TTAGCCCCAAGATACGCTAT+AGG - chr8_4:8160831-8160850 None:intergenic 45.0%
AGCCCTAAGTCTAGTTAGAG+TGG - chr8_4:8160887-8160906 None:intergenic 45.0%
CTAGACTTAGGGCTTAAGTC+AGG + chr8_4:8160893-8160912 Msa1311390:intron 45.0%
TGGAGGGAGTTTGCAATGTT+TGG - chr8_4:8161790-8161809 None:intergenic 45.0%
TCACTCACTCACTACTCTAC+TGG - chr8_4:8161841-8161860 None:intergenic 45.0%
GAGTGAGGAGATTCATGTGA+TGG - chr8_4:8161897-8161916 None:intergenic 45.0%
ACAGAGGTAGATGGGAGATT+GGG - chr8_4:8161925-8161944 None:intergenic 45.0%
AGCATTCTCTCCTTTCCCTT+TGG + chr8_4:8162092-8162111 Msa1311390:intron 45.0%
AGCAACAACAACCGTTCAGA+TGG + chr8_4:8162421-8162440 Msa1311390:intron 45.0%
CAACAAATCGCTGCAACTGT+TGG + chr8_4:8162508-8162527 Msa1311390:intron 45.0%
! ATCGTCTTCGCGGCTTTATA+GGG + chr8_4:8162609-8162628 Msa1311390:intron 45.0%
! GCGGCTTTATAGGGTGATTA+GGG + chr8_4:8162618-8162637 Msa1311390:intron 45.0%
!! GTTGGTTCTGCTGATGTGTT+GGG + chr8_4:8162721-8162740 Msa1311390:intron 45.0%
TTCTGCTGATGTGTTGGGAT+TGG + chr8_4:8162726-8162745 Msa1311390:intron 45.0%
!! TGATGTGTTGGGATTGGTTG+CGG + chr8_4:8162732-8162751 Msa1311390:intron 45.0%
!! ACGCCAGGTGGATTGATATT+CGG + chr8_4:8162761-8162780 Msa1311390:intron 45.0%
TTCGTCAAACTCTGCAAAGG+CGG - chr8_4:8162802-8162821 None:intergenic 45.0%
! GCTTTTCATTGTGCAGTCTG+TGG + chr8_4:8162834-8162853 Msa1311390:intron 45.0%
TCATTGTGCAGTCTGTGGAT+AGG + chr8_4:8162839-8162858 Msa1311390:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr8_4:8163110-8163129 None:intergenic 45.0%
! CAAAGCCTTATCCCACTAAG+TGG - chr8_4:8163112-8163131 None:intergenic 45.0%
GAACAAATCACTGTTCTCCG+CGG - chr8_4:8163289-8163308 None:intergenic 45.0%
AAAAGACACCCCTACTACAC+TGG - chr8_4:8163604-8163623 None:intergenic 45.0%
AGATCGTGAGTGCAATAGAC+TGG + chr8_4:8163720-8163739 Msa1311390:intron 45.0%
GATCGTGAGTGCAATAGACT+GGG + chr8_4:8163721-8163740 Msa1311390:intron 45.0%
!! CTGTGGCACTTGTGTTTTTG+TGG + chr8_4:8163795-8163814 Msa1311390:intron 45.0%
TGAAACAAAAGGGACAGGGT+GGG - chr8_4:8164054-8164073 None:intergenic 45.0%
ATGAAACAAAAGGGACAGGG+TGG - chr8_4:8164055-8164074 None:intergenic 45.0%
GGCATGAAACAAAAGGGACA+GGG - chr8_4:8164058-8164077 None:intergenic 45.0%
TGGCATGAAACAAAAGGGAC+AGG - chr8_4:8164059-8164078 None:intergenic 45.0%
GCTATAGTGCTACAGTCTAG+CGG + chr8_4:8164201-8164220 Msa1311390:intron 45.0%
! GAACAGACCACTATTTTCCG+TGG + chr8_4:8164237-8164256 Msa1311390:intron 45.0%
CTGTCAACCACGGAAAATAG+TGG - chr8_4:8164247-8164266 None:intergenic 45.0%
CCTCTAGTGAGTAGTGACAA+CGG - chr8_4:8164330-8164349 None:intergenic 45.0%
CAGGATACTAACTGCTGCAA+TGG - chr8_4:8164480-8164499 None:intergenic 45.0%
CATTGCAGCAGTTAGTATCC+TGG + chr8_4:8164478-8164497 Msa1311390:CDS 45.0%
CAGCAGTTAGTATCCTGGAT+TGG + chr8_4:8164483-8164502 Msa1311390:CDS 45.0%
!! TAGTATCCTGGATTGGCCAA+AGG + chr8_4:8164490-8164509 Msa1311390:CDS 45.0%
!! AATGGCAACAAAGGGGTGTT+CGG + chr8_4:8164588-8164607 Msa1311390:CDS 45.0%
ATACGTACAGGATACAAGGC+AGG + chr8_4:8164632-8164651 Msa1311390:intron 45.0%
TACGTACAGGATACAAGGCA+GGG + chr8_4:8164633-8164652 Msa1311390:intron 45.0%
CGACACAGATGGTTGTGATT+TGG - chr8_4:8164984-8165003 None:intergenic 45.0%
! GGATGATTTGGCATTAGTCC+AGG + chr8_4:8165520-8165539 Msa1311390:CDS 45.0%
ATTTGGCATTAGTCCAGGCA+AGG + chr8_4:8165525-8165544 Msa1311390:CDS 45.0%
TGCTGGTGTCTGGAGAATAA+AGG + chr8_4:8165673-8165692 Msa1311390:CDS 45.0%
ACGAACAACTGTTGAGGACA+TGG + chr8_4:8165724-8165743 Msa1311390:CDS 45.0%
TTATACGCCTCGTAAGTCTC+TGG - chr8_4:8165901-8165920 None:intergenic 45.0%
ACAGCATCTTGTCTGCCTTT+AGG - chr8_4:8166891-8166910 None:intergenic 45.0%
GCATAACCTTCAGCCAATGA+TGG - chr8_4:8166996-8167015 None:intergenic 45.0%
! TCGTTGATTACTTCATGCGG+AGG - chr8_4:8167125-8167144 None:intergenic 45.0%
GCAGAATAAGCTTCCTCAGA+AGG - chr8_4:8167428-8167447 None:intergenic 45.0%
TCCATTGACCATGTTCCTTC+CGG + chr8_4:8167482-8167501 Msa1311390:CDS 45.0%
TGTAACAAACAACCCAGGCT+GGG - chr8_4:8167518-8167537 None:intergenic 45.0%
ATGTAACAAACAACCCAGGC+TGG - chr8_4:8167519-8167538 None:intergenic 45.0%
CTTAGGATAGACATGACTCC+AGG - chr8_4:8167543-8167562 None:intergenic 45.0%
TGGAAGTTCTTACGAATGGG+TGG + chr8_4:8167671-8167690 Msa1311390:CDS 45.0%
TGAGCCTAAGATGTTCTCTG+TGG + chr8_4:8168125-8168144 Msa1311390:three_prime_UTR 45.0%
ACAGCAAATCAGTTGCTGCT+TGG + chr8_4:8168164-8168183 Msa1311390:three_prime_UTR 45.0%
! ATGACTTGGCAACAACAACG+AGG - chr8_4:8168235-8168254 None:intergenic 45.0%
GACACTTGAAGAAGGGTTTC+TGG + chr8_4:8168308-8168327 Msa1311390:three_prime_UTR 45.0%
TTTGCCTGCCTGAACTGAAA+AGG + chr8_4:8168353-8168372 Msa1311390:three_prime_UTR 45.0%
!!! TATTATTTTTATTTTAAGAA+TGG + chr8_4:8166089-8166108 Msa1311390:intron 5.0%
CTGCCAACAATCAAGGGAGA+TGG - chr8_4:8160184-8160203 None:intergenic 50.0%
CAAGCACGAGTCTTGAGACA+AGG - chr8_4:8160679-8160698 None:intergenic 50.0%
CTTGTCTCAAGACTCGTGCT+TGG + chr8_4:8160677-8160696 Msa1311390:intron 50.0%
GGTCAGTGAGTCCTTGTAGA+GGG - chr8_4:8160744-8160763 None:intergenic 50.0%
AGGTCAGTGAGTCCTTGTAG+AGG - chr8_4:8160745-8160764 None:intergenic 50.0%
GGACTCACTGACCTTCCTTA+AGG + chr8_4:8160751-8160770 Msa1311390:intron 50.0%
TACGCTATAGGTGGTTTCGG+GGG - chr8_4:8160819-8160838 None:intergenic 50.0%
GGAGATTGGGTGAATGAGTG+AGG - chr8_4:8161912-8161931 None:intergenic 50.0%
GACAGAGGTAGATGGGAGAT+TGG - chr8_4:8161926-8161945 None:intergenic 50.0%
GAGGGGTTAAGGAAAGACAG+AGG - chr8_4:8161941-8161960 None:intergenic 50.0%
GTATCCGTTGATGTTACCGG+AGG + chr8_4:8162379-8162398 Msa1311390:intron 50.0%
TCCACCTCCGGTAACATCAA+CGG - chr8_4:8162386-8162405 None:intergenic 50.0%
! CATCGTCTTCGCGGCTTTAT+AGG + chr8_4:8162608-8162627 Msa1311390:intron 50.0%
! CGCGGCTTTATAGGGTGATT+AGG + chr8_4:8162617-8162636 Msa1311390:intron 50.0%
! CTGGCATTTTAGGCCACCTT+CGG + chr8_4:8162699-8162718 Msa1311390:intron 50.0%
! CATTTTAGGCCACCTTCGGT+TGG + chr8_4:8162703-8162722 Msa1311390:intron 50.0%
ACATCAGCAGAACCAACCGA+AGG - chr8_4:8162718-8162737 None:intergenic 50.0%
!! GGTTGGTTCTGCTGATGTGT+TGG + chr8_4:8162720-8162739 Msa1311390:intron 50.0%
!! CGCCAGGTGGATTGATATTC+GGG + chr8_4:8162762-8162781 Msa1311390:intron 50.0%
TGCCCGAATATCAATCCACC+TGG - chr8_4:8162767-8162786 None:intergenic 50.0%
GATTAGGCCTGTTGCTAGTG+TGG + chr8_4:8162903-8162922 Msa1311390:intron 50.0%
!! TGGGAGTGTTGAGAGTGTGA+TGG + chr8_4:8162936-8162955 Msa1311390:intron 50.0%
ACTAAGTGGGGTCGGCTAAA+TGG - chr8_4:8163098-8163117 None:intergenic 50.0%
ATTTAGCCGACCCCACTTAG+TGG + chr8_4:8163097-8163116 Msa1311390:intron 50.0%
TTTAGCCGACCCCACTTAGT+GGG + chr8_4:8163098-8163117 Msa1311390:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr8_4:8163106-8163125 None:intergenic 50.0%
TGCTGTGAGCCAGTGTAGTA+GGG + chr8_4:8163592-8163611 Msa1311390:intron 50.0%
CCGTTGTCACTACTCACTAG+AGG + chr8_4:8164327-8164346 Msa1311390:intron 50.0%
ATGAAGTGGGGTTGGAGAGA+CGG - chr8_4:8164360-8164379 None:intergenic 50.0%
TTCTCTCCTTTGGCCAATCC+AGG - chr8_4:8164499-8164518 None:intergenic 50.0%
TTACAAATGCCCACCTTGCC+TGG - chr8_4:8165541-8165560 None:intergenic 50.0%
GAGGTTGAACAGCAGGTGAA+TGG + chr8_4:8165617-8165636 Msa1311390:intron 50.0%
TCAATGGAACTGCTGGTGTC+TGG + chr8_4:8165663-8165682 Msa1311390:CDS 50.0%
CTGGAGAATAAAGGCCCTAG+AGG + chr8_4:8165682-8165701 Msa1311390:CDS 50.0%
ATAAAGGCCCTAGAGGAGAG+TGG + chr8_4:8165689-8165708 Msa1311390:CDS 50.0%
! AAGTCTCTGGAAGCTCACAG+AGG - chr8_4:8165888-8165907 None:intergenic 50.0%
TGAGCTTCCAGAGACTTACG+AGG + chr8_4:8165891-8165910 Msa1311390:CDS 50.0%
GAGCAATTAGGAGCTCTCTC+TGG + chr8_4:8166858-8166877 Msa1311390:intron 50.0%
TCCGGAAGGAACATGGTCAA+TGG - chr8_4:8167486-8167505 None:intergenic 50.0%
TAAGTGTTCTTCCAGCCCCA+CGG + chr8_4:8167559-8167578 Msa1311390:CDS 50.0%
! TCCACCTTTTCAGTTCAGGC+AGG - chr8_4:8168360-8168379 None:intergenic 50.0%
TCTCAAGACTCGTGCTTGGG+TGG + chr8_4:8160681-8160700 Msa1311390:intron 55.0%
ACGCTATAGGTGGTTTCGGG+GGG - chr8_4:8160818-8160837 None:intergenic 55.0%
GCCCCAAGATACGCTATAGG+TGG - chr8_4:8160828-8160847 None:intergenic 55.0%
TAAAAGAGTAGGGTGGCGCG+TGG - chr8_4:8161967-8161986 None:intergenic 55.0%
GTGAGATACACGCGCTGCTT+TGG - chr8_4:8161994-8162013 None:intergenic 55.0%
TCCGTTGATGTTACCGGAGG+TGG + chr8_4:8162382-8162401 Msa1311390:intron 55.0%
GTTGATGTTACCGGAGGTGG+AGG + chr8_4:8162385-8162404 Msa1311390:intron 55.0%
!! GCGCTGATTCATCGTCTTCG+CGG + chr8_4:8162599-8162618 Msa1311390:intron 55.0%
TCAGCAGAACCAACCGAAGG+TGG - chr8_4:8162715-8162734 None:intergenic 55.0%
! TGGTTGCGGTGTTTTACGCC+AGG + chr8_4:8162746-8162765 Msa1311390:intron 55.0%
! TTGCGGTGTTTTACGCCAGG+TGG + chr8_4:8162749-8162768 Msa1311390:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr8_4:8163104-8163123 Msa1311390:intron 55.0%
GTGCTGTGAGCCAGTGTAGT+AGG + chr8_4:8163591-8163610 Msa1311390:intron 55.0%
GCTGTGAGCCAGTGTAGTAG+GGG + chr8_4:8163593-8163612 Msa1311390:intron 55.0%
AACAAAAGGGACAGGGTGGG+TGG - chr8_4:8164051-8164070 None:intergenic 55.0%
AGTGCTACAGTCTAGCGGTG+TGG + chr8_4:8164206-8164225 Msa1311390:intron 55.0%
TGGCATTAGTCCAGGCAAGG+TGG + chr8_4:8165528-8165547 Msa1311390:CDS 55.0%
GGCATTAGTCCAGGCAAGGT+GGG + chr8_4:8165529-8165548 Msa1311390:CDS 55.0%
CCTGCTGTTCAACCTCGAAG+TGG - chr8_4:8165613-8165632 None:intergenic 55.0%
CCACTTCGAGGTTGAACAGC+AGG + chr8_4:8165610-8165629 Msa1311390:intron 55.0%
GCTGTTCGTGCTCATCTCTG+CGG + chr8_4:8165752-8165771 Msa1311390:CDS 55.0%
TTCGTGCTCATCTCTGCGGA+TGG + chr8_4:8165756-8165775 Msa1311390:CDS 55.0%
GCATTGGACCAGAATGCCAG+CGG - chr8_4:8165936-8165955 None:intergenic 55.0%
TGAAAACGCATGGAAGGGGC+CGG + chr8_4:8166803-8166822 Msa1311390:intron 55.0%
TAGGAGCTCTCTCTGGACTC+TGG + chr8_4:8166865-8166884 Msa1311390:intron 55.0%
CTCTCTGGACTCTGGCCTAA+AGG + chr8_4:8166873-8166892 Msa1311390:intron 55.0%
AAGCCACCTTGCGCCATCAT+TGG + chr8_4:8166980-8166999 Msa1311390:intron 55.0%
! CTTCAGCCAATGATGGCGCA+AGG - chr8_4:8166989-8167008 None:intergenic 55.0%
! CTTGCGCCATCATTGGCTGA+AGG + chr8_4:8166987-8167006 Msa1311390:intron 55.0%
CTCAGCTTCCGGAAGGAACA+TGG - chr8_4:8167493-8167512 None:intergenic 55.0%
GTGGGGCTGGAAGAACACTT+AGG - chr8_4:8167560-8167579 None:intergenic 55.0%
GCCTGCCTGAACTGAAAAGG+TGG + chr8_4:8168356-8168375 Msa1311390:three_prime_UTR 55.0%
GACTCGTGCTTGGGTGGTTG+TGG + chr8_4:8160687-8160706 Msa1311390:intron 60.0%
AGGGGATGCGCCCTTAAGGA+AGG - chr8_4:8160765-8160784 None:intergenic 60.0%
TATAGGTGGTTTCGGGGGGG+GGG - chr8_4:8160814-8160833 None:intergenic 60.0%
CTATAGGTGGTTTCGGGGGG+GGG - chr8_4:8160815-8160834 None:intergenic 60.0%
GCTATAGGTGGTTTCGGGGG+GGG - chr8_4:8160816-8160835 None:intergenic 60.0%
CGCTATAGGTGGTTTCGGGG+GGG - chr8_4:8160817-8160836 None:intergenic 60.0%
! GCGCGTGGATTGAGGGGTTA+AGG - chr8_4:8161952-8161971 None:intergenic 60.0%
! TAGGGTGGCGCGTGGATTGA+GGG - chr8_4:8161959-8161978 None:intergenic 60.0%
GATGTTACCGGAGGTGGAGG+AGG + chr8_4:8162388-8162407 Msa1311390:intron 60.0%
TCCACATCCTCCTCCACCTC+CGG - chr8_4:8162398-8162417 None:intergenic 60.0%
AAGGCCCTAGAGGAGAGTGG+CGG + chr8_4:8165692-8165711 Msa1311390:CDS 60.0%
CAACAGCACCGCTGGCATTC+TGG + chr8_4:8165925-8165944 Msa1311390:CDS 60.0%
! CAGCCAATGATGGCGCAAGG+TGG - chr8_4:8166986-8167005 None:intergenic 60.0%
AATGGGAATGACCGTGGGGC+TGG - chr8_4:8167573-8167592 None:intergenic 60.0%
AGGGAGGGGATGCGCCCTTA+AGG - chr8_4:8160769-8160788 None:intergenic 65.0%
ATAGGTGGTTTCGGGGGGGG+GGG - chr8_4:8160813-8160832 None:intergenic 65.0%
! AGGGTGGCGCGTGGATTGAG+GGG - chr8_4:8161958-8161977 None:intergenic 65.0%
! GTAGGGTGGCGCGTGGATTG+AGG - chr8_4:8161960-8161979 None:intergenic 65.0%
ACCGGAGGTGGAGGAGGATG+TGG + chr8_4:8162394-8162413 Msa1311390:intron 65.0%
GGAGGTGGAGGAGGATGTGG+AGG + chr8_4:8162397-8162416 Msa1311390:intron 65.0%
CCAGCCGCCACTCTCCTCTA+GGG - chr8_4:8165699-8165718 None:intergenic 65.0%
ACCAGCCGCCACTCTCCTCT+AGG - chr8_4:8165700-8165719 None:intergenic 65.0%
AAACGCATGGAAGGGGCCGG+AGG + chr8_4:8166806-8166825 Msa1311390:intron 65.0%
CTGGGAGCTCAGCTTCCGGA+AGG - chr8_4:8167500-8167519 None:intergenic 65.0%
CAGGCTGGGAGCTCAGCTTC+CGG - chr8_4:8167504-8167523 None:intergenic 65.0%
GGAAGCTGAGCTCCCAGCCT+GGG + chr8_4:8167503-8167522 Msa1311390:CDS 65.0%
TAGGTGGTTTCGGGGGGGGG+GGG - chr8_4:8160812-8160831 None:intergenic 70.0%
CCCTAGAGGAGAGTGGCGGC+TGG + chr8_4:8165696-8165715 Msa1311390:CDS 70.0%
CGGAAGCTGAGCTCCCAGCC+TGG + chr8_4:8167502-8167521 Msa1311390:CDS 70.0%
AGGTGGTTTCGGGGGGGGGG+GGG - chr8_4:8160811-8160830 None:intergenic 75.0%
! GGGGGGGGGGGGTAAGGGAG+GGG - chr8_4:8160783-8160802 None:intergenic 80.0%
! GGGGGGGGGGGGGTAAGGGA+GGG - chr8_4:8160784-8160803 None:intergenic 80.0%
! TGGTTTCGGGGGGGGGGGGG+GGG - chr8_4:8160808-8160827 None:intergenic 80.0%
! GTGGTTTCGGGGGGGGGGGG+GGG - chr8_4:8160809-8160828 None:intergenic 80.0%
! GGTGGTTTCGGGGGGGGGGG+GGG - chr8_4:8160810-8160829 None:intergenic 80.0%
! GGGGGGGGGGGGGGTAAGGG+AGG - chr8_4:8160785-8160804 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGTAA+GGG - chr8_4:8160788-8160807 None:intergenic 85.0%
! TTTCGGGGGGGGGGGGGGGG+GGG - chr8_4:8160805-8160824 None:intergenic 85.0%
! GTTTCGGGGGGGGGGGGGGG+GGG - chr8_4:8160806-8160825 None:intergenic 85.0%
! GGTTTCGGGGGGGGGGGGGG+GGG - chr8_4:8160807-8160826 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGGGTA+AGG - chr8_4:8160789-8160808 None:intergenic 90.0%
! TTCGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160804-8160823 None:intergenic 90.0%
! TCGGGGGGGGGGGGGGGGGG+GGG - chr8_4:8160803-8160822 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 8160160 8168623 8160160 ID=Msa1311390;Name=Msa1311390
chr8_4 mRNA 8160160 8168623 8160160 ID=Msa1311390-mRNA-1;Parent=Msa1311390;Name=Msa1311390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.28|0.85|0.66|0.28|7|604|487
chr8_4 exon 8160160 8160291 8160160 ID=Msa1311390-mRNA-1:exon:3003;Parent=Msa1311390-mRNA-1
chr8_4 exon 8164464 8164635 8164464 ID=Msa1311390-mRNA-1:exon:3004;Parent=Msa1311390-mRNA-1
chr8_4 exon 8164642 8164772 8164642 ID=Msa1311390-mRNA-1:exon:3005;Parent=Msa1311390-mRNA-1
chr8_4 exon 8165515 8165619 8165515 ID=Msa1311390-mRNA-1:exon:3006;Parent=Msa1311390-mRNA-1
chr8_4 exon 8165632 8165805 8165632 ID=Msa1311390-mRNA-1:exon:3007;Parent=Msa1311390-mRNA-1
chr8_4 exon 8165883 8165996 8165883 ID=Msa1311390-mRNA-1:exon:3008;Parent=Msa1311390-mRNA-1
chr8_4 exon 8167384 8168623 8167384 ID=Msa1311390-mRNA-1:exon:3009;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8160160 8160291 8160160 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8164464 8164635 8164464 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8164642 8164772 8164642 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8165515 8165619 8165515 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8165632 8165805 8165632 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8165883 8165996 8165883 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 CDS 8167384 8168019 8167384 ID=Msa1311390-mRNA-1:cds;Parent=Msa1311390-mRNA-1
chr8_4 three_prime_UTR 8168020 8168623 8168020 ID=Msa1311390-mRNA-1:three_prime_utr;Parent=Msa1311390-mRNA-1
Gene Sequence

>Msa1311390

ATGGATGAAGCAAAACCTATTCCATCTCCCTTGATTGTTGGCAGCAAACTTTCCAAAGATGGTTATGAACCTCTCATTGACCCCATTGTGTATAGATCAATTGTTGGTGTCTTGCAATACTACAATATCTTCGTTTACCATCAATCCATTGCAGCAGTTAGTATCCTGGATTGGCCAAAGGAGAGAATGCTTGTACAAGTCCTTGATGATTCGGATGAAGTAGATATCCAAAACCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATCATATATAGACATAGGCTTATACGATACAAGGCAGGGAATCTTAAATCTGCAATGAGTTGTGATTATGTTAAGGATTATGACTTTGTGGCAATATTTGATGCTGATTTCCAGCCAACACCAGATTTCTTAAAGAAGACGATACCTTATTTCAAGGGAAGGGATGATTTGGCATTAGTCCAGGCAAGGTGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTACAGAATATCAATTTATCGTTCCACTTCGAGGTGAATGGTATCTTTATTGACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTAGAGGAGAGTGGCGGCTGGTTAGAACGAACAACTGTTGAGGACATGGACATTGCTGTTCGTGCTCATCTCTGCGGATGGAAGTTTATTTTTCTCAATGATGTTAAGTGCCTCTGTGAGCTTCCAGAGACTTACGAGGCGTATAAAAAACAACAGCACCGCTGGCATTCTGGTCCAATGCAATTGTTTCGTATGTGTTTTGTTGATGTACTTCGTTCAAAGGTTAGTTGGGCAAAAAAGTTCAACTTGATCTTTCTTTTCTTCCTTCTGAGGAAGCTTATTCTGCCATTTTATTCGTTCACGCTCTTCTGCATTATTCTTCCATTGACCATGTTCCTTCCGGAAGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCTGGAGTCATGTCTATCCTAAGTGTTCTTCCAGCCCCACGGTCATTCCCATTTATAGTGCCTTATCTTCTATTTGAGAACACTATGTCAGTAACTAAGTTTAATGCAATGATATCCGGATTATTTCGCTTTGGAAGTTCTTACGAATGGGTGGTTACAAAAAAACTAGGAAGGTCATCAGAGACAGATTTGGTTGCCTATGAAAAGGAATCCGAACCTCTAATGCGATCTAATAGTCTTCATAGATCTTCCTCAGATTCAGGTATTGAAGAGCTAAGCAAACTAGAATTGTCAAAGATAGCTCCAAAGACCAAGAAAAATCGTCTCTACAGGAAAGAACTTGCTCTTGCATTTATTTTGTTAACTGCCTCGGTTAGAAGCTTACTTTCTGCTCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGGGTAAGTTTTCTTGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTTAGTTGA
Protein sequence

>Msa1311390

MDEAKPIPSPLIVGSKLSKDGYEPLIDPIVYRSIVGVLQYYNIFVYHQSIAAVSILDWPKERMLVQVLDDSDEVDIQNLIKAEVHKWQQRGVRIIYRHRLIRYKAGNLKSAMSCDYVKDYDFVAIFDADFQPTPDFLKKTIPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVNGIFIDFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRMCFVDVLRSKVSWAKKFNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSILSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAYEKESEPLMRSNSLHRSSSDSGIEELSKLELSKIAPKTKKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVS*