Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312260 | sp|Q9XI47|SHH1_ARATH | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.59e-51 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312260 | A0A072TMY2 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 2.03e-154 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1231560 | Msa1312260 | 0.872153 | 3.958985e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312260 | MtrunA17_Chr8g0340501 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 3.91e-158 | 438 |
| Msa1312260 | MtrunA17_Chr3g0140441 | 41.791 | 201 | 96 | 2 | 4 | 203 | 50 | 230 | 8.46e-47 | 154 |
| Msa1312260 | MtrunA17_Chr8g0360221 | 42.786 | 201 | 104 | 2 | 14 | 203 | 58 | 258 | 3.54e-46 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312260 | AT1G15215.2 | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.63e-52 | 170 |
| Msa1312260 | AT1G15215.3 | 46.154 | 195 | 94 | 3 | 14 | 197 | 58 | 252 | 1.99e-49 | 162 |
| Msa1312260 | AT1G15215.4 | 47.541 | 183 | 87 | 2 | 18 | 191 | 62 | 244 | 8.37e-49 | 161 |
| Msa1312260 | AT3G18380.1 | 42.791 | 215 | 98 | 4 | 14 | 203 | 58 | 272 | 3.63e-46 | 156 |
| Msa1312260 | AT3G18380.3 | 42.254 | 213 | 100 | 4 | 14 | 203 | 58 | 270 | 3.66e-45 | 154 |
| Msa1312260 | AT3G18380.2 | 42.593 | 216 | 98 | 5 | 14 | 203 | 58 | 273 | 4.31e-45 | 154 |
| Msa1312260 | AT1G15215.1 | 41.053 | 95 | 47 | 2 | 18 | 103 | 62 | 156 | 3.44e-11 | 60.1 |
Find 78 sgRNAs with CRISPR-Local
Find 579 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTCTGTATGTTTATTT+TGG | 0.149207 | 8_4:-9251284 | None:intergenic |
| AACCTAGTTGTTGATCTTTC+AGG | 0.153320 | 8_4:+9251339 | Msa1312260:CDS |
| AGGCAAATCTTCTTCGATAA+AGG | 0.253676 | 8_4:+9251359 | Msa1312260:CDS |
| GAATGGATTAATGTGAAATA+TGG | 0.288200 | 8_4:+9257960 | Msa1312260:CDS |
| CGCTATCATGTTCCCTCCTC+TGG | 0.309106 | 8_4:-9258442 | None:intergenic |
| GGCAAATCTTCTTCGATAAA+GGG | 0.336483 | 8_4:+9251360 | Msa1312260:CDS |
| GTGAATCGTGCTGCTTGCTT+TGG | 0.392220 | 8_4:-9250253 | None:intergenic |
| CTATTGAGTAAAGATCTTCT+TGG | 0.392507 | 8_4:-9258925 | None:intergenic |
| GAACTCAACTGCTCTGAAAT+CGG | 0.399205 | 8_4:+9250188 | Msa1312260:five_prime_UTR |
| CATCCCCACAAGTTCGCTAT+GGG | 0.406353 | 8_4:-9258731 | None:intergenic |
| CAAGTTCGCTATGGGGTTCA+TGG | 0.408654 | 8_4:-9258723 | None:intergenic |
| ACCTCAGACTCTTCTTGTGT+TGG | 0.421940 | 8_4:-9258680 | None:intergenic |
| CACTTTGCTTTATCACCTGA+GGG | 0.424676 | 8_4:+9251312 | Msa1312260:CDS |
| AGTCATGTGTATCCGTTGTA+AGG | 0.427104 | 8_4:+9258874 | Msa1312260:three_prime_UTR |
| AATGGATTAATGTGAAATAT+GGG | 0.432813 | 8_4:+9257961 | Msa1312260:CDS |
| CATGGTAGGTTCTAATTCAA+AGG | 0.438209 | 8_4:-9258705 | None:intergenic |
| TGACTTGATTCAAATTAGTC+AGG | 0.450579 | 8_4:-9258856 | None:intergenic |
| ATAAGTATAGTCGTGATTGT+AGG | 0.455631 | 8_4:+9258982 | Msa1312260:three_prime_UTR |
| AATAAAATTACAAAGTTAAG+TGG | 0.456885 | 8_4:+9250160 | Msa1312260:five_prime_UTR |
| TCTGAAATCGGCGGTGGAGT+TGG | 0.457123 | 8_4:+9250200 | Msa1312260:five_prime_UTR |
| ATACAATAGCATCACAATAG+AGG | 0.459718 | 8_4:-9258412 | None:intergenic |
| TCATCCCCACAAGTTCGCTA+TGG | 0.466754 | 8_4:-9258732 | None:intergenic |
| ATGGTAGGTTCTAATTCAAA+GGG | 0.467786 | 8_4:-9258704 | None:intergenic |
| GACACTCTGAAGCTTCCAAC+GGG | 0.471475 | 8_4:-9258001 | None:intergenic |
| CTTGCTTTGGCATGCAATCG+CGG | 0.473854 | 8_4:-9250240 | None:intergenic |
| GAAGTTCGTGTACGATATCA+TGG | 0.474345 | 8_4:+9257918 | Msa1312260:CDS |
| CACGATTCACTTCATAGCTC+TGG | 0.474699 | 8_4:+9250266 | Msa1312260:five_prime_UTR |
| GTTGGGACAGTTTGTGCTGT+AGG | 0.490372 | 8_4:+9258657 | Msa1312260:CDS |
| CAGACTTGTCATGGTAAAAC+CGG | 0.492608 | 8_4:-9258490 | None:intergenic |
| ACAACTAGGTTCAGCCCCTC+AGG | 0.495898 | 8_4:-9251327 | None:intergenic |
| AAGATCTTTACTCAATAGAC+TGG | 0.497612 | 8_4:+9258930 | Msa1312260:three_prime_UTR |
| ACCTCGTCTAAAGAGAGCTT+AGG | 0.500697 | 8_4:-9250346 | None:intergenic |
| TTGGCAGGAAGAAGTTCGTT+GGG | 0.502315 | 8_4:+9258640 | Msa1312260:intron |
| GTAGCTGCATCTTCACTGTC+CGG | 0.504908 | 8_4:+9258471 | Msa1312260:CDS |
| CGTGTACGATATCATGGATT+CGG | 0.506096 | 8_4:+9257924 | Msa1312260:CDS |
| AAATAAACATACAGAGTCAA+AGG | 0.511141 | 8_4:+9251287 | Msa1312260:CDS |
| AACTACAGAGTTCTATGCAC+AGG | 0.512186 | 8_4:+9256613 | Msa1312260:CDS |
| GGCATGCAATCGCGGAATTG+CGG | 0.515020 | 8_4:-9250232 | None:intergenic |
| TCACTTTGCTTTATCACCTG+AGG | 0.516843 | 8_4:+9251311 | Msa1312260:CDS |
| TTGGGTTTCAGGTGCAGCAG+TGG | 0.521043 | 8_4:+9251259 | Msa1312260:intron |
| TCGGTAAGGATGAAGATGAA+TGG | 0.521822 | 8_4:+9257943 | Msa1312260:CDS |
| CAAGAAATACAGTTCCCTAA+AGG | 0.523819 | 8_4:-9258793 | None:intergenic |
| AACTGCTCTGAAATCGGCGG+TGG | 0.530545 | 8_4:+9250194 | Msa1312260:five_prime_UTR |
| AAAAGCTCTCCAAAACCAAA+AGG | 0.532507 | 8_4:+9251387 | Msa1312260:CDS |
| TTTGGCAGGAAGAAGTTCGT+TGG | 0.535920 | 8_4:+9258639 | Msa1312260:intron |
| TTCGCTATGGGGTTCATGGT+AGG | 0.542458 | 8_4:-9258719 | None:intergenic |
| CTCTGAAGCTTCCAACGGGA+TGG | 0.544158 | 8_4:-9257997 | None:intergenic |
| GAACCCCATAGCGAACTTGT+GGG | 0.545514 | 8_4:+9258727 | Msa1312260:CDS |
| TTCAGAGTGTCACAAGGTGA+AGG | 0.548383 | 8_4:+9258013 | Msa1312260:CDS |
| TATCTATAAAAGACAATGCA+TGG | 0.556904 | 8_4:+9256255 | Msa1312260:CDS |
| AATAAACATACAGAGTCAAA+GGG | 0.557520 | 8_4:+9251288 | Msa1312260:CDS |
| TACAATAGCATCACAATAGA+GGG | 0.559629 | 8_4:-9258411 | None:intergenic |
| TGAACCCCATAGCGAACTTG+TGG | 0.569394 | 8_4:+9258726 | Msa1312260:CDS |
| CGTTGTAAGGGATCTCTATG+AGG | 0.574147 | 8_4:+9258887 | Msa1312260:three_prime_UTR |
| TCAAAATCTTCTTATTCACA+TGG | 0.579129 | 8_4:-9258823 | None:intergenic |
| AGATCACCTCAGACTTGTCA+TGG | 0.581330 | 8_4:-9258499 | None:intergenic |
| ACGATATCATGGATTCGGTA+AGG | 0.582236 | 8_4:+9257929 | Msa1312260:CDS |
| GTCATGTGTATCCGTTGTAA+GGG | 0.583368 | 8_4:+9258875 | Msa1312260:three_prime_UTR |
| GTCAGAATTAGCATTTGAAG+CGG | 0.595947 | 8_4:+9256232 | Msa1312260:CDS |
| TGACACTCTGAAGCTTCCAA+CGG | 0.596601 | 8_4:-9258002 | None:intergenic |
| TCCTAAGCTCTCTTTAGACG+AGG | 0.605342 | 8_4:+9250345 | Msa1312260:CDS |
| TGTATTGAAAATCCAGAGGA+GGG | 0.612784 | 8_4:+9258430 | Msa1312260:CDS |
| GAGTGTCACAAGGTGAAGGA+AGG | 0.613478 | 8_4:+9258017 | Msa1312260:CDS |
| TTGTATTGAAAATCCAGAGG+AGG | 0.615133 | 8_4:+9258429 | Msa1312260:CDS |
| TGCCTGAAAGATCAACAACT+AGG | 0.616326 | 8_4:-9251341 | None:intergenic |
| GCGACAGAGATCCATCCCGT+TGG | 0.618217 | 8_4:+9257986 | Msa1312260:CDS |
| ATCCCCACAAGTTCGCTATG+GGG | 0.619916 | 8_4:-9258730 | None:intergenic |
| ACTACAGAGTTCTATGCACA+GGG | 0.642918 | 8_4:+9256614 | Msa1312260:CDS |
| GCCAACACAAGAAGAGTCTG+AGG | 0.651201 | 8_4:+9258679 | Msa1312260:CDS |
| ACTTTGCTTTATCACCTGAG+GGG | 0.653399 | 8_4:+9251313 | Msa1312260:CDS |
| CTCAACTGCTCTGAAATCGG+CGG | 0.658455 | 8_4:+9250191 | Msa1312260:five_prime_UTR |
| AACCCCATAGCGAACTTGTG+GGG | 0.664375 | 8_4:+9258728 | Msa1312260:CDS |
| CTCATAGAGATCCCTTACAA+CGG | 0.667367 | 8_4:-9258886 | None:intergenic |
| GGAAGCTTCAGAGTGTCACA+AGG | 0.669493 | 8_4:+9258007 | Msa1312260:CDS |
| ATGGATTAATGTGAAATATG+GGG | 0.705458 | 8_4:+9257962 | Msa1312260:CDS |
| TGGTAGGTTCTAATTCAAAG+GGG | 0.708779 | 8_4:-9258703 | None:intergenic |
| CTATTGTATTGAAAATCCAG+AGG | 0.723013 | 8_4:+9258426 | Msa1312260:CDS |
| CTACAGAGTTCTATGCACAG+GGG | 0.821056 | 8_4:+9256615 | Msa1312260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATCTTTTTTTTTAACA+AGG | - | chr8_4:9252094-9252113 | None:intergenic | 10.0% |
| !!! | ATATTATTATTATTTTCTTC+AGG | - | chr8_4:9252546-9252565 | None:intergenic | 10.0% |
| !!! | TTTATAAAATGAATTTTTGT+TGG | + | chr8_4:9255886-9255905 | Msa1312260:intron | 10.0% |
| !! | TTTATGTAAGTAAAATAAAA+AGG | - | chr8_4:9258079-9258098 | None:intergenic | 10.0% |
| !! | AATAAAATTACAAAGTTAAG+TGG | + | chr8_4:9250160-9250179 | Msa1312260:five_prime_UTR | 15.0% |
| !! | AAAACAAAATAAATTCAAAC+CGG | - | chr8_4:9250954-9250973 | None:intergenic | 15.0% |
| !! | TTATCTTGATGTTTATATAT+CGG | - | chr8_4:9252066-9252085 | None:intergenic | 15.0% |
| !!! | TATTATTGGTATTTCTTTTT+TGG | - | chr8_4:9252573-9252592 | None:intergenic | 15.0% |
| !! | TGATTATCATTTATTAATTC+TGG | - | chr8_4:9252668-9252687 | None:intergenic | 15.0% |
| !!! | GAGATATTTTAATTATATTG+TGG | - | chr8_4:9252913-9252932 | None:intergenic | 15.0% |
| !!! | TACATCTGAAATAAATAAAA+GGG | + | chr8_4:9253270-9253289 | Msa1312260:intron | 15.0% |
| !! | TTGTATTATTGAATAAGAAA+AGG | - | chr8_4:9256107-9256126 | None:intergenic | 15.0% |
| !! | ACAAATAATGATGAAACAAA+GGG | - | chr8_4:9250448-9250467 | None:intergenic | 20.0% |
| !! | TACAAATAATGATGAAACAA+AGG | - | chr8_4:9250449-9250468 | None:intergenic | 20.0% |
| !!! | ATAAGTTTGTTTCATAATTC+AGG | - | chr8_4:9250918-9250937 | None:intergenic | 20.0% |
| !! | ACTTATAGATTATACAAAAC+CGG | + | chr8_4:9250932-9250951 | Msa1312260:intron | 20.0% |
| !!! | TATTTTCTTGAAATTGAAGT+TGG | - | chr8_4:9251925-9251944 | None:intergenic | 20.0% |
| !!! | TTTTAAATGTTCCAAATCTT+TGG | + | chr8_4:9251945-9251964 | Msa1312260:intron | 20.0% |
| !!! | CACAATATTTCTTTTATACA+CGG | + | chr8_4:9252338-9252357 | Msa1312260:intron | 20.0% |
| !! | ACAACTGTGATAATTATTAT+TGG | - | chr8_4:9252587-9252606 | None:intergenic | 20.0% |
| !! | AAATATCTCATCATAATGTT+AGG | + | chr8_4:9252924-9252943 | Msa1312260:intron | 20.0% |
| !!! | GTACATCTGAAATAAATAAA+AGG | + | chr8_4:9253269-9253288 | Msa1312260:intron | 20.0% |
| !! | TGAAATAAATAAAAGGGATT+TGG | + | chr8_4:9253276-9253295 | Msa1312260:intron | 20.0% |
| !! | GAAATAAATAAAAGGGATTT+GGG | + | chr8_4:9253277-9253296 | Msa1312260:intron | 20.0% |
| !!! | AAATTTTATACACCCAAAAT+GGG | - | chr8_4:9253392-9253411 | None:intergenic | 20.0% |
| !!! | AGCAATATGAAAATTTTGTT+TGG | - | chr8_4:9253712-9253731 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTTTTTTCTTC+TGG | + | chr8_4:9254335-9254354 | Msa1312260:intron | 20.0% |
| !!! | TTTCCATTTTTTTTTCTTCT+GGG | + | chr8_4:9254336-9254355 | Msa1312260:intron | 20.0% |
| !! | ATTAAAAATCACTTGATTCT+AGG | + | chr8_4:9254957-9254976 | Msa1312260:intron | 20.0% |
| !! | ATCCAAATTTAACCATAAAT+AGG | - | chr8_4:9255721-9255740 | None:intergenic | 20.0% |
| !!! | ATGAAATTTTTTTAAGCCAA+GGG | - | chr8_4:9255927-9255946 | None:intergenic | 20.0% |
| !!! | TGTGACATTTTTAAACATTT+TGG | + | chr8_4:9256337-9256356 | Msa1312260:intron | 20.0% |
| !! | ACTAAATAACTAACCAAAAA+AGG | - | chr8_4:9256529-9256548 | None:intergenic | 20.0% |
| !!! | GTAAGATTCTTTTATATCTT+TGG | + | chr8_4:9256643-9256662 | Msa1312260:intron | 20.0% |
| !! | TATTTGAAGAAAAATAAGGA+AGG | - | chr8_4:9256743-9256762 | None:intergenic | 20.0% |
| !! | AAAGAATCAAATACAAAAAC+AGG | - | chr8_4:9256766-9256785 | None:intergenic | 20.0% |
| !! | TAGTTTCTATTGCTTAAAAA+AGG | - | chr8_4:9256929-9256948 | None:intergenic | 20.0% |
| !! | CAAATTGTACTATGTAAAAA+TGG | + | chr8_4:9257112-9257131 | Msa1312260:intron | 20.0% |
| !! | TCTTATACATAGTACTATTT+GGG | - | chr8_4:9257219-9257238 | None:intergenic | 20.0% |
| !!! | TATATGGATTTCTAATGTTT+TGG | - | chr8_4:9257268-9257287 | None:intergenic | 20.0% |
| !! | GTGGAAATGAAAATAAAAAT+CGG | + | chr8_4:9257576-9257595 | Msa1312260:intron | 20.0% |
| !!! | TTAAAAATCATTTTGGAACA+GGG | - | chr8_4:9257667-9257686 | None:intergenic | 20.0% |
| !!! | ATTAAAAATCATTTTGGAAC+AGG | - | chr8_4:9257668-9257687 | None:intergenic | 20.0% |
| !!! | CATGGTATTAAAAATCATTT+TGG | - | chr8_4:9257674-9257693 | None:intergenic | 20.0% |
| !!! | AAGTTTCCATTATTTTTCAA+TGG | - | chr8_4:9257738-9257757 | None:intergenic | 20.0% |
| !! | GTTCATAAGTATACAAATAT+AGG | - | chr8_4:9257785-9257804 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGGTATATTAT+GGG | + | chr8_4:9257848-9257867 | Msa1312260:intron | 20.0% |
| !!! | AATGGATTAATGTGAAATAT+GGG | + | chr8_4:9257961-9257980 | Msa1312260:CDS | 20.0% |
| !! | AAGAAAAAAAAACTACGTTT+GGG | - | chr8_4:9258304-9258323 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAACTACGTT+TGG | - | chr8_4:9258305-9258324 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTCACAAGATAC+TGG | + | chr8_4:9259010-9259029 | Msa1312260:three_prime_UTR | 20.0% |
| ! | AAGAAACAGAAGATTCAAAA+AGG | - | chr8_4:9250391-9250410 | None:intergenic | 25.0% |
| ! | TCATCATTATTTGTAGATAC+TGG | + | chr8_4:9250454-9250473 | Msa1312260:intron | 25.0% |
| ! | TTATTTGTAGATACTGGAAT+TGG | + | chr8_4:9250460-9250479 | Msa1312260:intron | 25.0% |
| ! | GAAAGAATTTACAATGATGT+TGG | + | chr8_4:9250482-9250501 | Msa1312260:intron | 25.0% |
| ! | TCTACTGAAATAAGTACTTA+TGG | + | chr8_4:9250637-9250656 | Msa1312260:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr8_4:9251037-9251056 | Msa1312260:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | + | chr8_4:9251038-9251057 | Msa1312260:intron | 25.0% |
| ! | AAATAATGAACGTAACACAA+AGG | - | chr8_4:9251064-9251083 | None:intergenic | 25.0% |
| !! | TTGACTCTGTATGTTTATTT+TGG | - | chr8_4:9251287-9251306 | None:intergenic | 25.0% |
| ! | AAATAAACATACAGAGTCAA+AGG | + | chr8_4:9251287-9251306 | Msa1312260:CDS | 25.0% |
| ! | AATAAACATACAGAGTCAAA+GGG | + | chr8_4:9251288-9251307 | Msa1312260:CDS | 25.0% |
| ! | TTAAAAGCTAAGAGCAAAAA+AGG | - | chr8_4:9251417-9251436 | None:intergenic | 25.0% |
| ! | TGTTGCTATGAATTCAAAAA+AGG | + | chr8_4:9251437-9251456 | Msa1312260:intron | 25.0% |
| !!! | TTTATTTTGTTGTCAGTACT+AGG | + | chr8_4:9251521-9251540 | Msa1312260:intron | 25.0% |
| ! | ATGACACACTTTATCTTTAT+AGG | + | chr8_4:9251698-9251717 | Msa1312260:intron | 25.0% |
| ! | ACATTTCTATACCAAAGATT+TGG | - | chr8_4:9251959-9251978 | None:intergenic | 25.0% |
| !! | TTCAATTTCTTAAGAAGCAT+CGG | - | chr8_4:9251987-9252006 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAATACCTCAA+TGG | + | chr8_4:9251995-9252014 | Msa1312260:intron | 25.0% |
| !! | ACATAGATTTAGCCTATTTT+CGG | + | chr8_4:9252614-9252633 | Msa1312260:intron | 25.0% |
| ! | TGTACAAGTTATTATACGAT+AGG | - | chr8_4:9253254-9253273 | None:intergenic | 25.0% |
| !! | GAAATTTTATACACCCAAAA+TGG | - | chr8_4:9253393-9253412 | None:intergenic | 25.0% |
| !!! | GAAATGAGGAATTTTAGTTA+TGG | - | chr8_4:9253640-9253659 | None:intergenic | 25.0% |
| ! | AATCCCAGAAGAAAAAAAAA+TGG | - | chr8_4:9254342-9254361 | None:intergenic | 25.0% |
| ! | GTTTATGCTAGTATAAATGT+TGG | - | chr8_4:9254469-9254488 | None:intergenic | 25.0% |
| ! | GATTTCAGAATACACTAATA+AGG | + | chr8_4:9254509-9254528 | Msa1312260:intron | 25.0% |
| ! | ACTAATAAGGATACCTAATT+CGG | + | chr8_4:9254522-9254541 | Msa1312260:intron | 25.0% |
| ! | AGAATGATTATTTCCGAATT+AGG | - | chr8_4:9254538-9254557 | None:intergenic | 25.0% |
| ! | TGATATAATTTACTACCCAA+AGG | + | chr8_4:9254667-9254686 | Msa1312260:intron | 25.0% |
| ! | TGTTATAAAGTTGCTAAAAG+TGG | - | chr8_4:9254724-9254743 | None:intergenic | 25.0% |
| ! | ACTGAAGAATGACATAAAAA+TGG | - | chr8_4:9254757-9254776 | None:intergenic | 25.0% |
| !!! | ATTGTAAGTTGTTTTGATGT+TGG | - | chr8_4:9254813-9254832 | None:intergenic | 25.0% |
| ! | ACAACTTACAATTCATAGTT+CGG | + | chr8_4:9254821-9254840 | Msa1312260:intron | 25.0% |
| !!! | TATAGGTGATTTTGAAGTTT+GGG | - | chr8_4:9254866-9254885 | None:intergenic | 25.0% |
| !! | TCAAGTGATTTTTAATGCTA+TGG | - | chr8_4:9254953-9254972 | None:intergenic | 25.0% |
| !!! | ATTTTGAAACGAAATTCGTA+TGG | - | chr8_4:9255205-9255224 | None:intergenic | 25.0% |
| !!! | TGTTGATGATGAATTTAGAA+TGG | - | chr8_4:9255264-9255283 | None:intergenic | 25.0% |
| !! | TAGTTATAACTCTTCCTTTT+GGG | - | chr8_4:9255426-9255445 | None:intergenic | 25.0% |
| !! | ATAGTTATAACTCTTCCTTT+TGG | - | chr8_4:9255427-9255446 | None:intergenic | 25.0% |
| ! | AGGAAGAGTTATAACTATAA+AGG | + | chr8_4:9255429-9255448 | Msa1312260:intron | 25.0% |
| ! | GACCTATTTATGGTTAAATT+TGG | + | chr8_4:9255716-9255735 | Msa1312260:intron | 25.0% |
| ! | AAATTTGGATGATTTCATGA+AGG | + | chr8_4:9255731-9255750 | Msa1312260:intron | 25.0% |
| !! | AAGGATGAAAATTTTTGTGA+TGG | + | chr8_4:9255750-9255769 | Msa1312260:intron | 25.0% |
| ! | TAAAATTGTGTAGAATGTTG+TGG | + | chr8_4:9255855-9255874 | Msa1312260:intron | 25.0% |
| !!! | CATGAAATTTTTTTAAGCCA+AGG | - | chr8_4:9255928-9255947 | None:intergenic | 25.0% |
| ! | CTTGGCTTAAAAAAATTTCA+TGG | + | chr8_4:9255926-9255945 | Msa1312260:intron | 25.0% |
| ! | GCTTAAAAAAATTTCATGGA+GGG | + | chr8_4:9255930-9255949 | Msa1312260:intron | 25.0% |
| !! | ATCATTTTCTATGTTAGTCA+TGG | + | chr8_4:9256009-9256028 | Msa1312260:intron | 25.0% |
| !! | TCATTTTCTATGTTAGTCAT+GGG | + | chr8_4:9256010-9256029 | Msa1312260:intron | 25.0% |
| ! | TAAATAGCAGAAAAAAGAAG+GGG | - | chr8_4:9256155-9256174 | None:intergenic | 25.0% |
| ! | GTAAATAGCAGAAAAAAGAA+GGG | - | chr8_4:9256156-9256175 | None:intergenic | 25.0% |
| ! | AGTAAATAGCAGAAAAAAGA+AGG | - | chr8_4:9256157-9256176 | None:intergenic | 25.0% |
| ! | TATCTATAAAAGACAATGCA+TGG | + | chr8_4:9256255-9256274 | Msa1312260:CDS | 25.0% |
| ! | AACTAACCAAAAAAGGTTAA+TGG | - | chr8_4:9256522-9256541 | None:intergenic | 25.0% |
| !!! | GAAAACAAAAAAGCATCAAA+AGG | - | chr8_4:9256562-9256581 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTTTTCCAATTAC+AGG | + | chr8_4:9256569-9256588 | Msa1312260:intron | 25.0% |
| ! | CAGGTATTTGAAGAAAAATA+AGG | - | chr8_4:9256747-9256766 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTGCTTAAAACA+TGG | + | chr8_4:9256784-9256803 | Msa1312260:intron | 25.0% |
| ! | TTTCATTTGAATTGCATGTT+AGG | + | chr8_4:9256835-9256854 | Msa1312260:intron | 25.0% |
| ! | TTATACATAGTACTATTTGG+GGG | - | chr8_4:9257217-9257236 | None:intergenic | 25.0% |
| ! | CTTATACATAGTACTATTTG+GGG | - | chr8_4:9257218-9257237 | None:intergenic | 25.0% |
| ! | CTCTTATACATAGTACTATT+TGG | - | chr8_4:9257220-9257239 | None:intergenic | 25.0% |
| ! | TTCAGAAAAATCTCATTGTT+GGG | + | chr8_4:9257292-9257311 | Msa1312260:intron | 25.0% |
| !! | GGTATCATGCTTTTATAATA+AGG | - | chr8_4:9257447-9257466 | None:intergenic | 25.0% |
| ! | TAAATTCACAAGTTATGTGA+TGG | + | chr8_4:9257611-9257630 | Msa1312260:intron | 25.0% |
| ! | TGGCAATTATTTAGATTACA+TGG | - | chr8_4:9257692-9257711 | None:intergenic | 25.0% |
| !!! | TTCCATTATTTTTCAATGGA+CGG | - | chr8_4:9257734-9257753 | None:intergenic | 25.0% |
| !! | AAAATTATTGCTGTTCTTAG+AGG | + | chr8_4:9257825-9257844 | Msa1312260:intron | 25.0% |
| !! | GATGTTCTTTTGGTATATTA+TGG | + | chr8_4:9257847-9257866 | Msa1312260:intron | 25.0% |
| !!! | GAATGGATTAATGTGAAATA+TGG | + | chr8_4:9257960-9257979 | Msa1312260:CDS | 25.0% |
| !! | ATGGATTAATGTGAAATATG+GGG | + | chr8_4:9257962-9257981 | Msa1312260:CDS | 25.0% |
| ! | TTGGATATGTGTTTGTATAT+GGG | - | chr8_4:9258242-9258261 | None:intergenic | 25.0% |
| ! | TTTGGATATGTGTTTGTATA+TGG | - | chr8_4:9258243-9258262 | None:intergenic | 25.0% |
| ! | ACCTGTGCAAAATTAATAAA+GGG | - | chr8_4:9258377-9258396 | None:intergenic | 25.0% |
| ! | TACCTGTGCAAAATTAATAA+AGG | - | chr8_4:9258378-9258397 | None:intergenic | 25.0% |
| !! | GTTTTTGTTAAAAAGAAGCA+AGG | - | chr8_4:9258532-9258551 | None:intergenic | 25.0% |
| !! | GGGAAGTACAAAATAAAAAT+TGG | - | chr8_4:9258765-9258784 | None:intergenic | 25.0% |
| ! | TCAAAATCTTCTTATTCACA+TGG | - | chr8_4:9258826-9258845 | None:intergenic | 25.0% |
| TCAAAAAGGTGAAATGAGAA+TGG | - | chr8_4:9250377-9250396 | None:intergenic | 30.0% | |
| AGAATTTACAATGATGTTGG+AGG | + | chr8_4:9250485-9250504 | Msa1312260:intron | 30.0% | |
| ! | AGGATATTGCTGCAAATTTT+AGG | + | chr8_4:9250534-9250553 | Msa1312260:intron | 30.0% |
| ! | GTCGTATTTATTTGAGGTTA+TGG | - | chr8_4:9250583-9250602 | None:intergenic | 30.0% |
| CCTCAAATAAATACGACTTT+CGG | + | chr8_4:9250586-9250605 | Msa1312260:intron | 30.0% | |
| !! | AAGCTATTTTGAAGAGCTTA+TGG | + | chr8_4:9250822-9250841 | Msa1312260:intron | 30.0% |
| ATGAATATGTCAATCCAAAC+AGG | - | chr8_4:9250864-9250883 | None:intergenic | 30.0% | |
| CTGCAAAATCAAAAACAAGT+AGG | - | chr8_4:9251105-9251124 | None:intergenic | 30.0% | |
| ATGGTAAAACTTCTTTATCG+TGG | + | chr8_4:9251142-9251161 | Msa1312260:intron | 30.0% | |
| TGGTAAAACTTCTTTATCGT+GGG | + | chr8_4:9251143-9251162 | Msa1312260:intron | 30.0% | |
| ! | TCTGAATCTCTGATACATTT+TGG | + | chr8_4:9251194-9251213 | Msa1312260:intron | 30.0% |
| !!! | TGATACATTTTGGAGTGTAT+GGG | + | chr8_4:9251204-9251223 | Msa1312260:intron | 30.0% |
| !!! | AAAGGAAAACCTTTTGGTTT+TGG | - | chr8_4:9251399-9251418 | None:intergenic | 30.0% |
| ! | AGCAAAAAAGGAAAACCTTT+TGG | - | chr8_4:9251405-9251424 | None:intergenic | 30.0% |
| GCTATGAATTCAAAAAAGGA+AGG | + | chr8_4:9251441-9251460 | Msa1312260:intron | 30.0% | |
| TTTGTTAGTTCAGACAAAGA+TGG | + | chr8_4:9251575-9251594 | Msa1312260:intron | 30.0% | |
| AGAAAATGAGAGAGAATGAA+AGG | + | chr8_4:9251636-9251655 | Msa1312260:intron | 30.0% | |
| ! | AAGCTGCATTTAAAACTTAC+TGG | - | chr8_4:9251740-9251759 | None:intergenic | 30.0% |
| TATAAGTAAGTATCTCACAG+AGG | - | chr8_4:9251857-9251876 | None:intergenic | 30.0% | |
| ! | AAATTGAAGTTGGTCAATCA+AGG | - | chr8_4:9251915-9251934 | None:intergenic | 30.0% |
| TAGACCAACAAAAAACATGA+AGG | + | chr8_4:9252390-9252409 | Msa1312260:intron | 30.0% | |
| TAGACCAACAAAAAACATGA+AGG | - | chr8_4:9252390-9252409 | None:intergenic | 30.0% | |
| ! | CAACAGATTTTCAATAACAC+TGG | - | chr8_4:9252694-9252713 | None:intergenic | 30.0% |
| ! | CAGTGTTATTGAAAATCTGT+TGG | + | chr8_4:9252692-9252711 | Msa1312260:intron | 30.0% |
| TGTTATTGAAAATCTGTTGG+TGG | + | chr8_4:9252695-9252714 | Msa1312260:intron | 30.0% | |
| TGCCTAAATTGCAGAAATTT+GGG | + | chr8_4:9252802-9252821 | Msa1312260:intron | 30.0% | |
| AACATAAATTTCCACACTGT+GGG | - | chr8_4:9252978-9252997 | None:intergenic | 30.0% | |
| TAACATAAATTTCCACACTG+TGG | - | chr8_4:9252979-9252998 | None:intergenic | 30.0% | |
| ACAGTGTGGAAATTTATGTT+AGG | + | chr8_4:9252978-9252997 | Msa1312260:intron | 30.0% | |
| GCTATTTGTGTAAGAGAATT+AGG | + | chr8_4:9253034-9253053 | Msa1312260:intron | 30.0% | |
| !! | TCCTAGGTAATTTTCTAGTA+GGG | - | chr8_4:9253068-9253087 | None:intergenic | 30.0% |
| !! | ATCCTAGGTAATTTTCTAGT+AGG | - | chr8_4:9253069-9253088 | None:intergenic | 30.0% |
| GGTACTATTTATGAGTTAAC+AGG | - | chr8_4:9253177-9253196 | None:intergenic | 30.0% | |
| CAAGTTATTATACGATAGGA+TGG | - | chr8_4:9253250-9253269 | None:intergenic | 30.0% | |
| ! | TTTTTAACCTCAACCCATTT+TGG | + | chr8_4:9253376-9253395 | Msa1312260:intron | 30.0% |
| ! | TTTTAACCTCAACCCATTTT+GGG | + | chr8_4:9253377-9253396 | Msa1312260:intron | 30.0% |
| TACTTATTTGAGTATGTCTC+TGG | + | chr8_4:9253570-9253589 | Msa1312260:intron | 30.0% | |
| ! | TTTCCGATAACAACTAGTTT+CGG | + | chr8_4:9253597-9253616 | Msa1312260:intron | 30.0% |
| !!! | GAATTTTAGTTATGGAACTC+CGG | - | chr8_4:9253632-9253651 | None:intergenic | 30.0% |
| TTTACTAATCGTTGGAAATG+AGG | - | chr8_4:9253654-9253673 | None:intergenic | 30.0% | |
| ! | GCTACGAAGCAATATTTTAT+GGG | - | chr8_4:9253680-9253699 | None:intergenic | 30.0% |
| ! | AGCTACGAAGCAATATTTTA+TGG | - | chr8_4:9253681-9253700 | None:intergenic | 30.0% |
| GTTCAAATGTACCATTCATA+TGG | + | chr8_4:9254577-9254596 | Msa1312260:intron | 30.0% | |
| TGACTATTATGCCATATGAA+TGG | - | chr8_4:9254591-9254610 | None:intergenic | 30.0% | |
| TATAATTTACTACCCAAAGG+TGG | + | chr8_4:9254670-9254689 | Msa1312260:intron | 30.0% | |
| ATAATTTACTACCCAAAGGT+GGG | + | chr8_4:9254671-9254690 | Msa1312260:intron | 30.0% | |
| !!! | ATAGGTGATTTTGAAGTTTG+GGG | - | chr8_4:9254865-9254884 | None:intergenic | 30.0% |
| !!! | CTATAGGTGATTTTGAAGTT+TGG | - | chr8_4:9254867-9254886 | None:intergenic | 30.0% |
| ! | CAATACTGGTCTAAAATTCA+TGG | + | chr8_4:9254891-9254910 | Msa1312260:intron | 30.0% |
| ! | ATTCGGATTAGAAACGAATT+CGG | - | chr8_4:9255077-9255096 | None:intergenic | 30.0% |
| GACACAAATTTCGTATGATT+CGG | - | chr8_4:9255094-9255113 | None:intergenic | 30.0% | |
| ! | TCGGGTAATAATTGGATTTT+TGG | - | chr8_4:9255144-9255163 | None:intergenic | 30.0% |
| ATCCAATTATTACCCGATTA+TGG | + | chr8_4:9255147-9255166 | Msa1312260:intron | 30.0% | |
| ATCCATAATCGGGTAATAAT+TGG | - | chr8_4:9255152-9255171 | None:intergenic | 30.0% | |
| ! | CCTAAATGACTCTTTTATGT+TGG | - | chr8_4:9255304-9255323 | None:intergenic | 30.0% |
| CCAACATAAAAGAGTCATTT+AGG | + | chr8_4:9255301-9255320 | Msa1312260:intron | 30.0% | |
| TTGTTTGGAAGCTTGATTAT+AGG | - | chr8_4:9255574-9255593 | None:intergenic | 30.0% | |
| ! | GATGAAAATTTTTGTGATGG+TGG | + | chr8_4:9255753-9255772 | Msa1312260:intron | 30.0% |
| GGCTTAAAAAAATTTCATGG+AGG | + | chr8_4:9255929-9255948 | Msa1312260:intron | 30.0% | |
| AAATAGCAGAAAAAAGAAGG+GGG | - | chr8_4:9256154-9256173 | None:intergenic | 30.0% | |
| ATTTACTCTTCTTCGATTTC+TGG | + | chr8_4:9256170-9256189 | Msa1312260:intron | 30.0% | |
| !!! | TCACAACCATTAACCTTTTT+TGG | + | chr8_4:9256513-9256532 | Msa1312260:intron | 30.0% |
| ! | TTTTGTCTCTTTCAACATAG+TGG | + | chr8_4:9256880-9256899 | Msa1312260:intron | 30.0% |
| TTTGTCTCTTTCAACATAGT+GGG | + | chr8_4:9256881-9256900 | Msa1312260:intron | 30.0% | |
| GAAAAGTGAATGTCAAACTT+TGG | + | chr8_4:9256955-9256974 | Msa1312260:intron | 30.0% | |
| CGCTTGATATGAAAAATATC+AGG | + | chr8_4:9257016-9257035 | Msa1312260:intron | 30.0% | |
| AACTCGCTATGATAGAAAAT+TGG | + | chr8_4:9257049-9257068 | Msa1312260:intron | 30.0% | |
| !!! | TCTAATGTTTTGGTGCTTTT+GGG | - | chr8_4:9257258-9257277 | None:intergenic | 30.0% |
| !!! | TTCTAATGTTTTGGTGCTTT+TGG | - | chr8_4:9257259-9257278 | None:intergenic | 30.0% |
| !!! | GATTTTTCTGAAGTGCTATA+TGG | - | chr8_4:9257284-9257303 | None:intergenic | 30.0% |
| CTTCAGAAAAATCTCATTGT+TGG | + | chr8_4:9257291-9257310 | Msa1312260:intron | 30.0% | |
| GTAGAACTTACGTTATATGT+GGG | + | chr8_4:9257346-9257365 | Msa1312260:intron | 30.0% | |
| ACTATTTAGCACAAGCAATT+GGG | - | chr8_4:9257381-9257400 | None:intergenic | 30.0% | |
| GAAATATCACAAACAATAGC+TGG | - | chr8_4:9257712-9257731 | None:intergenic | 30.0% | |
| TTCCGTCCATTGAAAAATAA+TGG | + | chr8_4:9257729-9257748 | Msa1312260:intron | 30.0% | |
| ! | AACAGCAATAATTTTACAGC+AGG | - | chr8_4:9257820-9257839 | None:intergenic | 30.0% |
| AGTTAATGTATGTTGTGATG+TGG | + | chr8_4:9257882-9257901 | Msa1312260:intron | 30.0% | |
| TTGTACTATGTTTCCATGTA+AGG | + | chr8_4:9258045-9258064 | Msa1312260:intron | 30.0% | |
| TGTACTATGTTTCCATGTAA+GGG | + | chr8_4:9258046-9258065 | Msa1312260:intron | 30.0% | |
| TAAACATAATGTGTATCCAG+TGG | + | chr8_4:9258095-9258114 | Msa1312260:intron | 30.0% | |
| TTCATTTAACACACGTTTGA+TGG | + | chr8_4:9258207-9258226 | Msa1312260:intron | 30.0% | |
| TCATTTAACACACGTTTGAT+GGG | + | chr8_4:9258208-9258227 | Msa1312260:intron | 30.0% | |
| !! | AAAAGAAGTATCAACGGTTA+GGG | - | chr8_4:9258352-9258371 | None:intergenic | 30.0% |
| ! | ACCCTTTATTAATTTTGCAC+AGG | + | chr8_4:9258373-9258392 | Msa1312260:intron | 30.0% |
| TACAATAGCATCACAATAGA+GGG | - | chr8_4:9258414-9258433 | None:intergenic | 30.0% | |
| ATACAATAGCATCACAATAG+AGG | - | chr8_4:9258415-9258434 | None:intergenic | 30.0% | |
| CTATTGTATTGAAAATCCAG+AGG | + | chr8_4:9258426-9258445 | Msa1312260:CDS | 30.0% | |
| ! | TATCATCTTTGGTAGTTGTT+AGG | + | chr8_4:9258575-9258594 | Msa1312260:intron | 30.0% |
| ! | ATGGTAGGTTCTAATTCAAA+GGG | - | chr8_4:9258707-9258726 | None:intergenic | 30.0% |
| !!! | ACTTCCCTTTTTTTTCCTTT+AGG | + | chr8_4:9258778-9258797 | Msa1312260:three_prime_UTR | 30.0% |
| !!! | CTTCCCTTTTTTTTCCTTTA+GGG | + | chr8_4:9258779-9258798 | Msa1312260:three_prime_UTR | 30.0% |
| GTTCCCTAAAGGAAAAAAAA+GGG | - | chr8_4:9258785-9258804 | None:intergenic | 30.0% | |
| AGTTCCCTAAAGGAAAAAAA+AGG | - | chr8_4:9258786-9258805 | None:intergenic | 30.0% | |
| TGACTTGATTCAAATTAGTC+AGG | - | chr8_4:9258859-9258878 | None:intergenic | 30.0% | |
| CTATTGAGTAAAGATCTTCT+TGG | - | chr8_4:9258928-9258947 | None:intergenic | 30.0% | |
| AAGATCTTTACTCAATAGAC+TGG | + | chr8_4:9258930-9258949 | Msa1312260:three_prime_UTR | 30.0% | |
| ATAAGTATAGTCGTGATTGT+AGG | + | chr8_4:9258982-9259001 | Msa1312260:three_prime_UTR | 30.0% | |
| GCAATATCCTTGCAGAAATT+GGG | - | chr8_4:9250524-9250543 | None:intergenic | 35.0% | |
| AGCAATATCCTTGCAGAAAT+TGG | - | chr8_4:9250525-9250544 | None:intergenic | 35.0% | |
| CCGAAAGTCGTATTTATTTG+AGG | - | chr8_4:9250589-9250608 | None:intergenic | 35.0% | |
| CAGAAGAGCTTAGTGAAATA+AGG | - | chr8_4:9250684-9250703 | None:intergenic | 35.0% | |
| CTTATTTCACTAAGCTCTTC+TGG | + | chr8_4:9250682-9250701 | Msa1312260:intron | 35.0% | |
| ATATTATTGCCGTTCCTGTT+TGG | + | chr8_4:9250847-9250866 | Msa1312260:intron | 35.0% | |
| TATGTCAATCCAAACAGGAA+CGG | - | chr8_4:9250859-9250878 | None:intergenic | 35.0% | |
| !!! | CTGATACATTTTGGAGTGTA+TGG | + | chr8_4:9251203-9251222 | Msa1312260:intron | 35.0% |
| !! | TAATGATACCGCTGTTGTTT+TGG | + | chr8_4:9251240-9251259 | Msa1312260:intron | 35.0% |
| !!! | AATGATACCGCTGTTGTTTT+GGG | + | chr8_4:9251241-9251260 | Msa1312260:intron | 35.0% |
| AACCTAGTTGTTGATCTTTC+AGG | + | chr8_4:9251339-9251358 | Msa1312260:CDS | 35.0% | |
| AGGCAAATCTTCTTCGATAA+AGG | + | chr8_4:9251359-9251378 | Msa1312260:CDS | 35.0% | |
| GGCAAATCTTCTTCGATAAA+GGG | + | chr8_4:9251360-9251379 | Msa1312260:CDS | 35.0% | |
| AAAAGCTCTCCAAAACCAAA+AGG | + | chr8_4:9251387-9251406 | Msa1312260:CDS | 35.0% | |
| GGAAGAAAGAACTACATTAC+TGG | + | chr8_4:9251462-9251481 | Msa1312260:intron | 35.0% | |
| CTTTATCTTTATAGGCACCA+CGG | + | chr8_4:9251706-9251725 | Msa1312260:intron | 35.0% | |
| TTACTCTATAACCTACTAGC+TGG | + | chr8_4:9251779-9251798 | Msa1312260:intron | 35.0% | |
| TTGTCTCACTTTAGATTCGA+CGG | - | chr8_4:9252203-9252222 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | - | chr8_4:9252443-9252462 | None:intergenic | 35.0% |
| ACATGAAGGTCCAAATGAAA+AGG | - | chr8_4:9252436-9252455 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | + | chr8_4:9252443-9252462 | Msa1312260:intron | 35.0% |
| GGTCTAAGTTAGCAAATTGT+AGG | + | chr8_4:9252464-9252483 | Msa1312260:intron | 35.0% | |
| GTTAGCAAATTGTAGGTCAT+AGG | + | chr8_4:9252471-9252490 | Msa1312260:intron | 35.0% | |
| ! | CTCAATTGGTTTCCGAAAAT+AGG | - | chr8_4:9252629-9252648 | None:intergenic | 35.0% |
| ! | ATTTTCGGAAACCAATTGAG+TGG | + | chr8_4:9252629-9252648 | Msa1312260:intron | 35.0% |
| TGCTTGTAATTCCACTCAAT+TGG | - | chr8_4:9252643-9252662 | None:intergenic | 35.0% | |
| !! | TGAAAATCTGTTGGTGGATT+TGG | + | chr8_4:9252701-9252720 | Msa1312260:intron | 35.0% |
| !! | GAAAATCTGTTGGTGGATTT+GGG | + | chr8_4:9252702-9252721 | Msa1312260:intron | 35.0% |
| CTGCCTAAATTGCAGAAATT+TGG | + | chr8_4:9252801-9252820 | Msa1312260:intron | 35.0% | |
| GACCCAAATTTCTGCAATTT+AGG | - | chr8_4:9252807-9252826 | None:intergenic | 35.0% | |
| TAATGTTAGGATCTCAACTG+TGG | + | chr8_4:9252937-9252956 | Msa1312260:intron | 35.0% | |
| AATGTTAGGATCTCAACTGT+GGG | + | chr8_4:9252938-9252957 | Msa1312260:intron | 35.0% | |
| ATGTTAGGAAAATGCTGATG+TGG | + | chr8_4:9252993-9253012 | Msa1312260:intron | 35.0% | |
| !! | CCTAGGTAATTTTCTAGTAG+GGG | - | chr8_4:9253067-9253086 | None:intergenic | 35.0% |
| TCTAGCATGAGTGTTAAACT+CGG | + | chr8_4:9253090-9253109 | Msa1312260:intron | 35.0% | |
| CAATATAAAGTACACGTCAG+TGG | - | chr8_4:9253198-9253217 | None:intergenic | 35.0% | |
| GAAACTAGTTGTTATCGGAA+AGG | - | chr8_4:9253598-9253617 | None:intergenic | 35.0% | |
| TAGCCGAAACTAGTTGTTAT+CGG | - | chr8_4:9253603-9253622 | None:intergenic | 35.0% | |
| ! | ATGGGCATTTTACTAATCGT+TGG | - | chr8_4:9253662-9253681 | None:intergenic | 35.0% |
| ATAATGTAGCCTATGACGTA+CGG | - | chr8_4:9254222-9254241 | None:intergenic | 35.0% | |
| ACTATGAGCATGTTACTCAT+AGG | + | chr8_4:9254373-9254392 | Msa1312260:intron | 35.0% | |
| TAGTTAGAAAACCCACCTTT+GGG | - | chr8_4:9254685-9254704 | None:intergenic | 35.0% | |
| TTAGTTAGAAAACCCACCTT+TGG | - | chr8_4:9254686-9254705 | None:intergenic | 35.0% | |
| !! | AAGGTGGGTTTTCTAACTAA+AGG | + | chr8_4:9254686-9254705 | Msa1312260:intron | 35.0% |
| AAAGTTGCTAAAAGTGGTTG+AGG | - | chr8_4:9254718-9254737 | None:intergenic | 35.0% | |
| !!! | TAGGTGATTTTGAAGTTTGG+GGG | - | chr8_4:9254864-9254883 | None:intergenic | 35.0% |
| TCACCTATAGACTTCAATAC+TGG | + | chr8_4:9254877-9254896 | Msa1312260:intron | 35.0% | |
| ! | AGACCAGTATTGAAGTCTAT+AGG | - | chr8_4:9254883-9254902 | None:intergenic | 35.0% |
| ! | TGGTCTAAAATTCATGGAAC+TGG | + | chr8_4:9254897-9254916 | Msa1312260:intron | 35.0% |
| !!! | GAAAGTTCTTGCTGTTTTAG+TGG | + | chr8_4:9254989-9255008 | Msa1312260:intron | 35.0% |
| TCGGAAAATGCAATTGAAGT+TGG | - | chr8_4:9255058-9255077 | None:intergenic | 35.0% | |
| GAAATTTGTGTCCAAACTGT+AGG | + | chr8_4:9255102-9255121 | Msa1312260:intron | 35.0% | |
| TCATTCAATTGCCTACAGTT+TGG | - | chr8_4:9255116-9255135 | None:intergenic | 35.0% | |
| AAACTGTAGGCAATTGAATG+AGG | + | chr8_4:9255115-9255134 | Msa1312260:intron | 35.0% | |
| ACTGCTGTATGATCCATAAT+CGG | - | chr8_4:9255163-9255182 | None:intergenic | 35.0% | |
| ! | GAAATTCGTATGGTTTTCAC+TGG | - | chr8_4:9255195-9255214 | None:intergenic | 35.0% |
| ! | TCATTTAGGACAACAAGTGA+GGG | + | chr8_4:9255315-9255334 | Msa1312260:intron | 35.0% |
| GCATAATTCAACTACCCAAA+AGG | + | chr8_4:9255409-9255428 | Msa1312260:intron | 35.0% | |
| ATAAAGGACTCACAATCTTG+TGG | + | chr8_4:9255445-9255464 | Msa1312260:intron | 35.0% | |
| ! | TAGAAGTTTGGAACTTGAGA+AGG | - | chr8_4:9255497-9255516 | None:intergenic | 35.0% |
| TATTAAGCCATTGGTACCTT+TGG | - | chr8_4:9255538-9255557 | None:intergenic | 35.0% | |
| ACCAATGGCTTAATACTTCA+TGG | + | chr8_4:9255543-9255562 | Msa1312260:intron | 35.0% | |
| ! | ACCATGAAGTATTAAGCCAT+TGG | - | chr8_4:9255547-9255566 | None:intergenic | 35.0% |
| ! | TGGAGTGAGAATTGATGATT+TGG | + | chr8_4:9255606-9255625 | Msa1312260:intron | 35.0% |
| !!! | AAATTTTTGTGATGGTGGTG+AGG | + | chr8_4:9255758-9255777 | Msa1312260:intron | 35.0% |
| ! | TTTTAAGCCAAGGGCAAAAT+TGG | - | chr8_4:9255918-9255937 | None:intergenic | 35.0% |
| TCATGGAGGGATATTACATT+AGG | + | chr8_4:9255943-9255962 | Msa1312260:intron | 35.0% | |
| GTCAGAATTAGCATTTGAAG+CGG | + | chr8_4:9256232-9256251 | Msa1312260:CDS | 35.0% | |
| ATAAAAGACAATGCATGGTG+AGG | + | chr8_4:9256260-9256279 | Msa1312260:intron | 35.0% | |
| !!! | AATCTTTTTGGAGTGAAGAG+TGG | - | chr8_4:9256449-9256468 | None:intergenic | 35.0% |
| AAAGGTTAATGGTTGTGAAG+AGG | - | chr8_4:9256511-9256530 | None:intergenic | 35.0% | |
| !! | AAAAATAAGGAAGGCATTGC+AGG | - | chr8_4:9256734-9256753 | None:intergenic | 35.0% |
| TGTTTGTGCTTAAAACATGG+TGG | + | chr8_4:9256787-9256806 | Msa1312260:intron | 35.0% | |
| TGACGAAGCAAAGAATAATG+TGG | + | chr8_4:9256988-9257007 | Msa1312260:intron | 35.0% | |
| !! | TTTAGAATGCCTTTTTCTCG+TGG | - | chr8_4:9257186-9257205 | None:intergenic | 35.0% |
| GGTAGAACTTACGTTATATG+TGG | + | chr8_4:9257345-9257364 | Msa1312260:intron | 35.0% | |
| CACTATTTAGCACAAGCAAT+TGG | - | chr8_4:9257382-9257401 | None:intergenic | 35.0% | |
| GTAGAAAAGCTCTCTTTCTT+AGG | + | chr8_4:9257411-9257430 | Msa1312260:intron | 35.0% | |
| AGCATGATACCTTCTTCAAA+TGG | + | chr8_4:9257456-9257475 | Msa1312260:intron | 35.0% | |
| GCATGATACCTTCTTCAAAT+GGG | + | chr8_4:9257457-9257476 | Msa1312260:intron | 35.0% | |
| CCACAACTTAATGTAAGTCT+GGG | - | chr8_4:9257560-9257579 | None:intergenic | 35.0% | |
| TCCACAACTTAATGTAAGTC+TGG | - | chr8_4:9257561-9257580 | None:intergenic | 35.0% | |
| ! | GTTCTTAGAGGATGTTCTTT+TGG | + | chr8_4:9257837-9257856 | Msa1312260:intron | 35.0% |
| GAATGAAGTGTACACAAACA+CGG | - | chr8_4:9258137-9258156 | None:intergenic | 35.0% | |
| GTCTTGTAATGTGTGTGAAA+AGG | - | chr8_4:9258159-9258178 | None:intergenic | 35.0% | |
| AACGTGTGTTAAATGAACAC+AGG | - | chr8_4:9258204-9258223 | None:intergenic | 35.0% | |
| CATTTAACACACGTTTGATG+GGG | + | chr8_4:9258209-9258228 | Msa1312260:intron | 35.0% | |
| ATTTAACACACGTTTGATGG+GGG | + | chr8_4:9258210-9258229 | Msa1312260:intron | 35.0% | |
| TTGATATGTTGGCAACAAGT+CGG | - | chr8_4:9258281-9258300 | None:intergenic | 35.0% | |
| ATCAACGGTTAGGGAATTTA+TGG | - | chr8_4:9258343-9258362 | None:intergenic | 35.0% | |
| !! | CAAAAGAAGTATCAACGGTT+AGG | - | chr8_4:9258353-9258372 | None:intergenic | 35.0% |
| !! | AGGGTCAAAAGAAGTATCAA+CGG | - | chr8_4:9258358-9258377 | None:intergenic | 35.0% |
| TTGTATTGAAAATCCAGAGG+AGG | + | chr8_4:9258429-9258448 | Msa1312260:CDS | 35.0% | |
| TGTATTGAAAATCCAGAGGA+GGG | + | chr8_4:9258430-9258449 | Msa1312260:CDS | 35.0% | |
| TAGCATGAATGCTGATGATA+TGG | - | chr8_4:9258557-9258576 | None:intergenic | 35.0% | |
| AGCATTCATGCTATCATCTT+TGG | + | chr8_4:9258564-9258583 | Msa1312260:intron | 35.0% | |
| GTAGTTGTTAGGTAAATCCT+CGG | + | chr8_4:9258586-9258605 | Msa1312260:intron | 35.0% | |
| ACACATGAAACATCAGGTAA+AGG | - | chr8_4:9258618-9258637 | None:intergenic | 35.0% | |
| ! | TGGTAGGTTCTAATTCAAAG+GGG | - | chr8_4:9258706-9258725 | None:intergenic | 35.0% |
| ! | CATGGTAGGTTCTAATTCAA+AGG | - | chr8_4:9258708-9258727 | None:intergenic | 35.0% |
| CAAGAAATACAGTTCCCTAA+AGG | - | chr8_4:9258796-9258815 | None:intergenic | 35.0% | |
| !! | GAACTCAACTGCTCTGAAAT+CGG | + | chr8_4:9250188-9250207 | Msa1312260:five_prime_UTR | 40.0% |
| ACTTGATCCCAATTTCTGCA+AGG | + | chr8_4:9250514-9250533 | Msa1312260:intron | 40.0% | |
| AGCTCTTCATCAAACAGTGA+TGG | + | chr8_4:9251123-9251142 | Msa1312260:intron | 40.0% | |
| AACTTCTTTATCGTGGGAAC+AGG | + | chr8_4:9251149-9251168 | Msa1312260:intron | 40.0% | |
| TCACTTTGCTTTATCACCTG+AGG | + | chr8_4:9251311-9251330 | Msa1312260:CDS | 40.0% | |
| CACTTTGCTTTATCACCTGA+GGG | + | chr8_4:9251312-9251331 | Msa1312260:CDS | 40.0% | |
| ACTTTGCTTTATCACCTGAG+GGG | + | chr8_4:9251313-9251332 | Msa1312260:CDS | 40.0% | |
| TGCCTGAAAGATCAACAACT+AGG | - | chr8_4:9251344-9251363 | None:intergenic | 40.0% | |
| TACTAGGCATTCACTTGCTT+TGG | + | chr8_4:9251537-9251556 | Msa1312260:intron | 40.0% | |
| ACTAGGCATTCACTTGCTTT+GGG | + | chr8_4:9251538-9251557 | Msa1312260:intron | 40.0% | |
| !! | TTCACTTGCTTTGGGGTAAA+TGG | + | chr8_4:9251546-9251565 | Msa1312260:intron | 40.0% |
| TTCAGACAAAGATGGTATGC+AGG | + | chr8_4:9251583-9251602 | Msa1312260:intron | 40.0% | |
| GATGGTATGCAGGAAGAAAA+TGG | + | chr8_4:9251593-9251612 | Msa1312260:intron | 40.0% | |
| GATAAAGTGTGTCATGTGCA+CGG | - | chr8_4:9251693-9251712 | None:intergenic | 40.0% | |
| ATATAGATGCACCAGCTAGT+AGG | - | chr8_4:9251793-9251812 | None:intergenic | 40.0% | |
| AAGTATCTCACAGAGGTCTA+AGG | - | chr8_4:9251850-9251869 | None:intergenic | 40.0% | |
| AATCACAAGACTGACCATTG+AGG | - | chr8_4:9252012-9252031 | None:intergenic | 40.0% | |
| CGACAAAGCTGATCATTCAA+TGG | - | chr8_4:9252145-9252164 | None:intergenic | 40.0% | |
| ! | ATCAGCTTTGTCGCAAATTG+TGG | + | chr8_4:9252152-9252171 | Msa1312260:intron | 40.0% |
| AAACCCATACGTATTGAACC+CGG | + | chr8_4:9252277-9252296 | Msa1312260:intron | 40.0% | |
| AGAAATATTGTGTGTCGCAG+TGG | - | chr8_4:9252330-9252349 | None:intergenic | 40.0% | |
| ! | CAAGTGTGCACCTTTTCATT+TGG | + | chr8_4:9252423-9252442 | Msa1312260:intron | 40.0% |
| ! | CTCATTTTGTCTCAACAACC+TGG | - | chr8_4:9252520-9252539 | None:intergenic | 40.0% |
| CAGGTTGTTGAGACAAAATG+AGG | + | chr8_4:9252518-9252537 | Msa1312260:intron | 40.0% | |
| TAAATGGCGGCAAATATTGC+AGG | + | chr8_4:9252739-9252758 | Msa1312260:intron | 40.0% | |
| AAATGGCGGCAAATATTGCA+GGG | + | chr8_4:9252740-9252759 | Msa1312260:intron | 40.0% | |
| !!! | AGTGTTTTGGTGCAACATCA+TGG | - | chr8_4:9252783-9252802 | None:intergenic | 40.0% |
| ! | CTGCAATTTAGGCAGTGTTT+TGG | - | chr8_4:9252796-9252815 | None:intergenic | 40.0% |
| ! | CTGATAAGTGTTGTCTATGG+CGG | - | chr8_4:9252848-9252867 | None:intergenic | 40.0% |
| ! | GTGCTGATAAGTGTTGTCTA+TGG | - | chr8_4:9252851-9252870 | None:intergenic | 40.0% |
| AATCTATCCACAGATCAGCA+CGG | - | chr8_4:9252877-9252896 | None:intergenic | 40.0% | |
| AAATTTCCACACTGTGGGTT+AGG | - | chr8_4:9252973-9252992 | None:intergenic | 40.0% | |
| CCCCTACTAGAAAATTACCT+AGG | + | chr8_4:9253064-9253083 | Msa1312260:intron | 40.0% | |
| ACACTCATGCTAGATATCCT+AGG | - | chr8_4:9253084-9253103 | None:intergenic | 40.0% | |
| ATGAGTGTTAAACTCGGCAT+CGG | + | chr8_4:9253096-9253115 | Msa1312260:intron | 40.0% | |
| TTCCATCTATCCTAGGTTGT+AGG | + | chr8_4:9253322-9253341 | Msa1312260:intron | 40.0% | |
| AAAAACAGATGGCGATCCTT+AGG | - | chr8_4:9253361-9253380 | None:intergenic | 40.0% | |
| GGGTTGAGGTTAAAAACAGA+TGG | - | chr8_4:9253372-9253391 | None:intergenic | 40.0% | |
| !! | TATACACCCAAAATGGGTTG+AGG | - | chr8_4:9253386-9253405 | None:intergenic | 40.0% |
| TATGCATAACTGAGCGATCA+AGG | + | chr8_4:9253415-9253434 | Msa1312260:intron | 40.0% | |
| ATGCATAACTGAGCGATCAA+GGG | + | chr8_4:9253416-9253435 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+TGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| ACCACATTATCTCTTCGTTG+AGG | + | chr8_4:9253906-9253925 | Msa1312260:intron | 40.0% | |
| TACTATGAGTCGTACCTCAT+AGG | + | chr8_4:9254143-9254162 | Msa1312260:intron | 40.0% | |
| AAGAGATGATGTAGCCTATG+AGG | - | chr8_4:9254160-9254179 | None:intergenic | 40.0% | |
| CATCTCTTCGTTGTAGCAAA+CGG | + | chr8_4:9254172-9254191 | Msa1312260:intron | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | - | chr8_4:9254221-9254240 | None:intergenic | 40.0% | |
| GAAGCTTAGCAGTGGAATTA+AGG | - | chr8_4:9254780-9254799 | None:intergenic | 40.0% | |
| ! | GGAATTTGGTTACGGGTTTT+GGG | - | chr8_4:9255023-9255042 | None:intergenic | 40.0% |
| ! | TGGAATTTGGTTACGGGTTT+TGG | - | chr8_4:9255024-9255043 | None:intergenic | 40.0% |
| ATCCTGCTGGAATTTGGTTA+CGG | - | chr8_4:9255031-9255050 | None:intergenic | 40.0% | |
| GGTAAAATCCTGCTGGAATT+TGG | - | chr8_4:9255037-9255056 | None:intergenic | 40.0% | |
| !! | TGAAGTTGGTAAAATCCTGC+TGG | - | chr8_4:9255044-9255063 | None:intergenic | 40.0% |
| CTGCTGTATGATCCATAATC+GGG | - | chr8_4:9255162-9255181 | None:intergenic | 40.0% | |
| ! | GTCATTTAGGACAACAAGTG+AGG | + | chr8_4:9255314-9255333 | Msa1312260:intron | 40.0% |
| GTGTAGCTATGTCATAAGCT+AGG | - | chr8_4:9255343-9255362 | None:intergenic | 40.0% | |
| AGCTTCCAAACAATTTCCCA+TGG | + | chr8_4:9255581-9255600 | Msa1312260:intron | 40.0% | |
| CCAATCCATGGGAAATTGTT+TGG | - | chr8_4:9255589-9255608 | None:intergenic | 40.0% | |
| CCAAACAATTTCCCATGGAT+TGG | + | chr8_4:9255586-9255605 | Msa1312260:intron | 40.0% | |
| CAATTCTCACTCCAATCCAT+GGG | - | chr8_4:9255600-9255619 | None:intergenic | 40.0% | |
| TCAATTCTCACTCCAATCCA+TGG | - | chr8_4:9255601-9255620 | None:intergenic | 40.0% | |
| TTTGCTTCTATGAGAGGAGA+AGG | + | chr8_4:9255652-9255671 | Msa1312260:intron | 40.0% | |
| ACTCTTATAGTAGCACCACA+AGG | + | chr8_4:9255693-9255712 | Msa1312260:intron | 40.0% | |
| CTCTTATAGTAGCACCACAA+GGG | + | chr8_4:9255694-9255713 | Msa1312260:intron | 40.0% | |
| AACCATAAATAGGTCCCTTG+TGG | - | chr8_4:9255711-9255730 | None:intergenic | 40.0% | |
| GAAGGGGGAAGAAATTATGT+TGG | + | chr8_4:9255812-9255831 | Msa1312260:intron | 40.0% | |
| !! | TGTTGGACTTTTGAGAGAGA+AGG | + | chr8_4:9255829-9255848 | Msa1312260:intron | 40.0% |
| ! | GCAAATACCAATTTTGCCCT+TGG | + | chr8_4:9255908-9255927 | Msa1312260:intron | 40.0% |
| AGTGATTGAGTAGAGAGAGA+AGG | + | chr8_4:9255972-9255991 | Msa1312260:intron | 40.0% | |
| GTGATTGAGTAGAGAGAGAA+GGG | + | chr8_4:9255973-9255992 | Msa1312260:intron | 40.0% | |
| TGATTGAGTAGAGAGAGAAG+GGG | + | chr8_4:9255974-9255993 | Msa1312260:intron | 40.0% | |
| AAAAAGAAGGGGGAAATCAC+TGG | - | chr8_4:9256144-9256163 | None:intergenic | 40.0% | |
| TACGTGAGAACTATAAGACG+TGG | + | chr8_4:9256362-9256381 | Msa1312260:intron | 40.0% | |
| GAGAACTATAAGACGTGGTA+TGG | + | chr8_4:9256367-9256386 | Msa1312260:intron | 40.0% | |
| AATGGTTGTGAAGAGGAGAT+GGG | - | chr8_4:9256504-9256523 | None:intergenic | 40.0% | |
| TAATGGTTGTGAAGAGGAGA+TGG | - | chr8_4:9256505-9256524 | None:intergenic | 40.0% | |
| TGCAACATCATGCCTGTAAT+TGG | - | chr8_4:9256584-9256603 | None:intergenic | 40.0% | |
| AACTACAGAGTTCTATGCAC+AGG | + | chr8_4:9256613-9256632 | Msa1312260:CDS | 40.0% | |
| ACTACAGAGTTCTATGCACA+GGG | + | chr8_4:9256614-9256633 | Msa1312260:CDS | 40.0% | |
| CTCAAGCTCAAAATCATGCA+TGG | + | chr8_4:9257160-9257179 | Msa1312260:intron | 40.0% | |
| AAGCTCTCTTTCTTAGGCAT+AGG | + | chr8_4:9257417-9257436 | Msa1312260:intron | 40.0% | |
| TGATATGGCCCATTTGAAGA+AGG | - | chr8_4:9257468-9257487 | None:intergenic | 40.0% | |
| ! | CCCAGACTTACATTAAGTTG+TGG | + | chr8_4:9257557-9257576 | Msa1312260:intron | 40.0% |
| GTGATGTGGCACATGATTTA+AGG | + | chr8_4:9257896-9257915 | Msa1312260:intron | 40.0% | |
| GAAGTTCGTGTACGATATCA+TGG | + | chr8_4:9257918-9257937 | Msa1312260:CDS | 40.0% | |
| CGTGTACGATATCATGGATT+CGG | + | chr8_4:9257924-9257943 | Msa1312260:CDS | 40.0% | |
| ! | ACGATATCATGGATTCGGTA+AGG | + | chr8_4:9257929-9257948 | Msa1312260:CDS | 40.0% |
| TCGGTAAGGATGAAGATGAA+TGG | + | chr8_4:9257943-9257962 | Msa1312260:CDS | 40.0% | |
| AAAGGCTAGAATCCCTTACA+TGG | - | chr8_4:9258061-9258080 | None:intergenic | 40.0% | |
| AACACGGCAACAATCATATG+TGG | - | chr8_4:9258121-9258140 | None:intergenic | 40.0% | |
| !! | CTACGTTTGGGTTGATATGT+TGG | - | chr8_4:9258292-9258311 | None:intergenic | 40.0% |
| CAGACTTGTCATGGTAAAAC+CGG | - | chr8_4:9258493-9258512 | None:intergenic | 40.0% | |
| ! | GTTTTACCATGACAAGTCTG+AGG | + | chr8_4:9258493-9258512 | Msa1312260:CDS | 40.0% |
| TCAGGTAAAGGTAATATCCG+AGG | - | chr8_4:9258606-9258625 | None:intergenic | 40.0% | |
| CCAAAGACACATGAAACATC+AGG | - | chr8_4:9258624-9258643 | None:intergenic | 40.0% | |
| CCTGATGTTTCATGTGTCTT+TGG | + | chr8_4:9258621-9258640 | Msa1312260:intron | 40.0% | |
| ATGTTTCATGTGTCTTTGGC+AGG | + | chr8_4:9258625-9258644 | Msa1312260:intron | 40.0% | |
| AGTCATGTGTATCCGTTGTA+AGG | + | chr8_4:9258874-9258893 | Msa1312260:three_prime_UTR | 40.0% | |
| GTCATGTGTATCCGTTGTAA+GGG | + | chr8_4:9258875-9258894 | Msa1312260:three_prime_UTR | 40.0% | |
| CTCATAGAGATCCCTTACAA+CGG | - | chr8_4:9258889-9258908 | None:intergenic | 40.0% | |
| CACGATTCACTTCATAGCTC+TGG | + | chr8_4:9250266-9250285 | Msa1312260:five_prime_UTR | 45.0% | |
| TCCTAAGCTCTCTTTAGACG+AGG | + | chr8_4:9250345-9250364 | Msa1312260:CDS | 45.0% | |
| ACCTCGTCTAAAGAGAGCTT+AGG | - | chr8_4:9250349-9250368 | None:intergenic | 45.0% | |
| ATCGTGGGAACAGGTTGTTA+AGG | + | chr8_4:9251158-9251177 | Msa1312260:intron | 45.0% | |
| CCTGAAACCCAAAACAACAG+CGG | - | chr8_4:9251251-9251270 | None:intergenic | 45.0% | |
| CTAGGCATTCACTTGCTTTG+GGG | + | chr8_4:9251539-9251558 | Msa1312260:intron | 45.0% | |
| TTATAGGCACCACGGATACA+AGG | + | chr8_4:9251714-9251733 | Msa1312260:intron | 45.0% | |
| ! | GAAGTTGGTCAATCAAGGAC+TGG | - | chr8_4:9251910-9251929 | None:intergenic | 45.0% |
| CTCATGCAATTGAAAGGACC+GGG | - | chr8_4:9252298-9252317 | None:intergenic | 45.0% | |
| CCTCATGCAATTGAAAGGAC+CGG | - | chr8_4:9252299-9252318 | None:intergenic | 45.0% | |
| GGCTACCTCATGCAATTGAA+AGG | - | chr8_4:9252304-9252323 | None:intergenic | 45.0% | |
| TATTGTGTGTCGCAGTGGTT+AGG | - | chr8_4:9252325-9252344 | None:intergenic | 45.0% | |
| ! | AAGGTGCACACTTGCTAACT+TGG | - | chr8_4:9252417-9252436 | None:intergenic | 45.0% |
| TTGTCTCAACAACCTGGACA+TGG | - | chr8_4:9252514-9252533 | None:intergenic | 45.0% | |
| CTCGTCGATATGGTAAATGG+CGG | + | chr8_4:9252726-9252745 | Msa1312260:intron | 45.0% | |
| ! | TTTGGTGCAACATCATGGCA+GGG | - | chr8_4:9252778-9252797 | None:intergenic | 45.0% |
| !! | TTTTGGTGCAACATCATGGC+AGG | - | chr8_4:9252779-9252798 | None:intergenic | 45.0% |
| AATGCTGATGTGGCAGAGTT+TGG | + | chr8_4:9253003-9253022 | Msa1312260:intron | 45.0% | |
| TGATGTGGCAGAGTTTGGTA+AGG | + | chr8_4:9253008-9253027 | Msa1312260:intron | 45.0% | |
| GATGTGGCAGAGTTTGGTAA+GGG | + | chr8_4:9253009-9253028 | Msa1312260:intron | 45.0% | |
| TGAGTGTTAAACTCGGCATC+GGG | + | chr8_4:9253097-9253116 | Msa1312260:intron | 45.0% | |
| GATGAAGAAGCTGAAGTAGC+TGG | - | chr8_4:9253222-9253241 | None:intergenic | 45.0% | |
| CAGTGAGTTCCATCTATCCT+AGG | + | chr8_4:9253315-9253334 | Msa1312260:intron | 45.0% | |
| TGCCTACAACCTAGGATAGA+TGG | - | chr8_4:9253327-9253346 | None:intergenic | 45.0% | |
| TTAGTTATGGAACTCCGGCT+TGG | - | chr8_4:9253627-9253646 | None:intergenic | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | - | chr8_4:9253910-9253929 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | + | chr8_4:9253913-9253932 | Msa1312260:intron | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | - | chr8_4:9253910-9253929 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | + | chr8_4:9253913-9253932 | Msa1312260:intron | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | - | chr8_4:9253910-9253929 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | + | chr8_4:9253913-9253932 | Msa1312260:intron | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | - | chr8_4:9253910-9253929 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | + | chr8_4:9253913-9253932 | Msa1312260:intron | 45.0% | |
| GCCACAACGAAGAGATAATG+TGG | - | chr8_4:9253910-9253929 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGTGGCGAA+CGG | + | chr8_4:9253913-9253932 | Msa1312260:intron | 45.0% | |
| GCCTCAACGAAGAGATAATG+TGG | - | chr8_4:9254100-9254119 | None:intergenic | 45.0% | |
| TATCTCTTCGTTGAGGCGAA+CGG | + | chr8_4:9254103-9254122 | Msa1312260:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | + | chr8_4:9254210-9254229 | Msa1312260:intron | 45.0% | |
| GAAGAACAGAAGCTTAGCAG+TGG | - | chr8_4:9254788-9254807 | None:intergenic | 45.0% | |
| TCCTGCTGGAATTTGGTTAC+GGG | - | chr8_4:9255030-9255049 | None:intergenic | 45.0% | |
| AAGGACTCACAATCTTGTGG+AGG | + | chr8_4:9255448-9255467 | Msa1312260:intron | 45.0% | |
| GGTTCCTCTTGAACACTTTG+TGG | + | chr8_4:9255469-9255488 | Msa1312260:intron | 45.0% | |
| CAAGAGCTTGGCTAGAAGTT+TGG | - | chr8_4:9255509-9255528 | None:intergenic | 45.0% | |
| ! | CTTTGGAAGAGACAAGAGCT+TGG | - | chr8_4:9255521-9255540 | None:intergenic | 45.0% |
| CAAGCTCTTGTCTCTTCCAA+AGG | + | chr8_4:9255519-9255538 | Msa1312260:intron | 45.0% | |
| !! | GTCTCTTCCAAAGGTACCAA+TGG | + | chr8_4:9255528-9255547 | Msa1312260:intron | 45.0% |
| CACCACAAGGGACCTATTTA+TGG | + | chr8_4:9255706-9255725 | Msa1312260:intron | 45.0% | |
| !!! | TTTTGTGATGGTGGTGAGGA+AGG | + | chr8_4:9255762-9255781 | Msa1312260:intron | 45.0% |
| ! | TCTGTAGGAGCTTTGACTCT+GGG | + | chr8_4:9256052-9256071 | Msa1312260:intron | 45.0% |
| GGCTCTTAACACATAATGCC+AGG | + | chr8_4:9256191-9256210 | Msa1312260:intron | 45.0% | |
| AGATCTGCAGCTTGAATACC+TGG | - | chr8_4:9256212-9256231 | None:intergenic | 45.0% | |
| TTGTGAAGAGGAGATGGGTA+TGG | - | chr8_4:9256499-9256518 | None:intergenic | 45.0% | |
| CTACAGAGTTCTATGCACAG+GGG | + | chr8_4:9256615-9256634 | Msa1312260:CDS | 45.0% | |
| TTAGCACAAGCAATTGGGCA+AGG | - | chr8_4:9257376-9257395 | None:intergenic | 45.0% | |
| ! | GACCATGAAAGCGTGTGATA+TGG | - | chr8_4:9257483-9257502 | None:intergenic | 45.0% |
| TTTCCCTCAAATTCCTGGTC+TGG | - | chr8_4:9257505-9257524 | None:intergenic | 45.0% | |
| !! | TCGCTTTTCCCTCAAATTCC+TGG | - | chr8_4:9257510-9257529 | None:intergenic | 45.0% |
| !! | TGACACTCTGAAGCTTCCAA+CGG | - | chr8_4:9258005-9258024 | None:intergenic | 45.0% |
| ! | TTCAGAGTGTCACAAGGTGA+AGG | + | chr8_4:9258013-9258032 | Msa1312260:CDS | 45.0% |
| CAACAATCATATGTGGCCAC+TGG | - | chr8_4:9258114-9258133 | None:intergenic | 45.0% | |
| ! | CGGTTGACTTCGCAAACATT+TGG | - | chr8_4:9258261-9258280 | None:intergenic | 45.0% |
| AGATCACCTCAGACTTGTCA+TGG | - | chr8_4:9258502-9258521 | None:intergenic | 45.0% | |
| TTTGGCAGGAAGAAGTTCGT+TGG | + | chr8_4:9258639-9258658 | Msa1312260:intron | 45.0% | |
| TTGGCAGGAAGAAGTTCGTT+GGG | + | chr8_4:9258640-9258659 | Msa1312260:intron | 45.0% | |
| ACCTCAGACTCTTCTTGTGT+TGG | - | chr8_4:9258683-9258702 | None:intergenic | 45.0% | |
| CGTTGTAAGGGATCTCTATG+AGG | + | chr8_4:9258887-9258906 | Msa1312260:three_prime_UTR | 45.0% | |
| !!! | AATAAAATAAAAAATCTTTT+TGG | - | chr8_4:9256461-9256480 | None:intergenic | 5.0% |
| !! | CTCAACTGCTCTGAAATCGG+CGG | + | chr8_4:9250191-9250210 | Msa1312260:five_prime_UTR | 50.0% |
| CTTGCTTTGGCATGCAATCG+CGG | - | chr8_4:9250243-9250262 | None:intergenic | 50.0% | |
| !! | GTGAATCGTGCTGCTTGCTT+TGG | - | chr8_4:9250256-9250275 | None:intergenic | 50.0% |
| CGTAACACAAAGGCCCTGTT+TGG | - | chr8_4:9251054-9251073 | None:intergenic | 50.0% | |
| !!! | CCGCTGTTGTTTTGGGTTTC+AGG | + | chr8_4:9251248-9251267 | Msa1312260:intron | 50.0% |
| !! | ACTTACTGGCCTTGTATCCG+TGG | - | chr8_4:9251726-9251745 | None:intergenic | 50.0% |
| ACTGGCGTTACAGAGGTCTA+AGG | - | chr8_4:9251892-9251911 | None:intergenic | 50.0% | |
| ! | ATCAAGGACTGGCGTTACAG+AGG | - | chr8_4:9251899-9251918 | None:intergenic | 50.0% |
| GGACCGGGTTCAATACGTAT+GGG | - | chr8_4:9252283-9252302 | None:intergenic | 50.0% | |
| AGGACCGGGTTCAATACGTA+TGG | - | chr8_4:9252284-9252303 | None:intergenic | 50.0% | |
| CCGGTCCTTTCAATTGCATG+AGG | + | chr8_4:9252296-9252315 | Msa1312260:intron | 50.0% | |
| AGACTTCATGAGCCATGTCC+AGG | + | chr8_4:9252499-9252518 | Msa1312260:intron | 50.0% | |
| GGCCTCGTCGATATGGTAAA+TGG | + | chr8_4:9252723-9252742 | Msa1312260:intron | 50.0% | |
| CGCCATTTACCATATCGACG+AGG | - | chr8_4:9252728-9252747 | None:intergenic | 50.0% | |
| TGCAACATCATGGCAGGGTA+TGG | - | chr8_4:9252773-9252792 | None:intergenic | 50.0% | |
| !! | GTGTTGTCTATGGCGGATGA+CGG | - | chr8_4:9252841-9252860 | None:intergenic | 50.0% |
| !! | CACACTGTGGGTTAGGAAGT+AGG | - | chr8_4:9252966-9252985 | None:intergenic | 50.0% |
| CTACTTCCTAACCCACAGTG+TGG | + | chr8_4:9252964-9252983 | Msa1312260:intron | 50.0% | |
| TCCTAGGTTGTAGGCAACCT+CGG | + | chr8_4:9253331-9253350 | Msa1312260:intron | 50.0% | |
| ! | GGAACTGGTGTCAAAACGTC+AGG | + | chr8_4:9254912-9254931 | Msa1312260:intron | 50.0% |
| !!! | TGGTTACGGGTTTTGGGACA+GGG | - | chr8_4:9255017-9255036 | None:intergenic | 50.0% |
| !!! | TTGGTTACGGGTTTTGGGAC+AGG | - | chr8_4:9255018-9255037 | None:intergenic | 50.0% |
| ACCCGTAACCAAATTCCAGC+AGG | + | chr8_4:9255026-9255045 | Msa1312260:intron | 50.0% | |
| ! | GGTGCCACAAAGTGTTCAAG+AGG | - | chr8_4:9255476-9255495 | None:intergenic | 50.0% |
| ! | ATGGTGGTGAGGAAGGATGA+TGG | + | chr8_4:9255769-9255788 | Msa1312260:intron | 50.0% |
| ATGGTGGCCGATGGTGTAAA+GGG | + | chr8_4:9255788-9255807 | Msa1312260:intron | 50.0% | |
| CCCTTCTCCCTTTACACCAT+CGG | - | chr8_4:9255798-9255817 | None:intergenic | 50.0% | |
| CCGATGGTGTAAAGGGAGAA+GGG | + | chr8_4:9255795-9255814 | Msa1312260:intron | 50.0% | |
| CGATGGTGTAAAGGGAGAAG+GGG | + | chr8_4:9255796-9255815 | Msa1312260:intron | 50.0% | |
| GATGGTGTAAAGGGAGAAGG+GGG | + | chr8_4:9255797-9255816 | Msa1312260:intron | 50.0% | |
| AGTCATGGGCAGAGAACGAA+CGG | + | chr8_4:9256024-9256043 | Msa1312260:intron | 50.0% | |
| GAACGAACGGTGTTCTCTGT+AGG | + | chr8_4:9256037-9256056 | Msa1312260:intron | 50.0% | |
| ! | CTCTGTAGGAGCTTTGACTC+TGG | + | chr8_4:9256051-9256070 | Msa1312260:intron | 50.0% |
| TGGAGTGAAGAGTGGTGACT+TGG | - | chr8_4:9256441-9256460 | None:intergenic | 50.0% | |
| TGAAGAGGAGATGGGTATGG+TGG | - | chr8_4:9256496-9256515 | None:intergenic | 50.0% | |
| !! | GAAGGCATTGCAGGCATGAA+AGG | - | chr8_4:9256725-9256744 | None:intergenic | 50.0% |
| CATGCATGGCCACGAGAAAA+AGG | + | chr8_4:9257174-9257193 | Msa1312260:intron | 50.0% | |
| CTCATTGTTGGGCACTTCAG+CGG | + | chr8_4:9257303-9257322 | Msa1312260:intron | 50.0% | |
| TCATTGTTGGGCACTTCAGC+GGG | + | chr8_4:9257304-9257323 | Msa1312260:intron | 50.0% | |
| GGCCATATCACACGCTTTCA+TGG | + | chr8_4:9257478-9257497 | Msa1312260:intron | 50.0% | |
| TGGTCCAGACCAGGAATTTG+AGG | + | chr8_4:9257498-9257517 | Msa1312260:intron | 50.0% | |
| GGTCCAGACCAGGAATTTGA+GGG | + | chr8_4:9257499-9257518 | Msa1312260:intron | 50.0% | |
| !! | GACACTCTGAAGCTTCCAAC+GGG | - | chr8_4:9258004-9258023 | None:intergenic | 50.0% |
| ! | GGAAGCTTCAGAGTGTCACA+AGG | + | chr8_4:9258007-9258026 | Msa1312260:CDS | 50.0% |
| GAGTGTCACAAGGTGAAGGA+AGG | + | chr8_4:9258017-9258036 | Msa1312260:CDS | 50.0% | |
| GTAGCTGCATCTTCACTGTC+CGG | + | chr8_4:9258471-9258490 | Msa1312260:CDS | 50.0% | |
| GTTGGGACAGTTTGTGCTGT+AGG | + | chr8_4:9258657-9258676 | Msa1312260:CDS | 50.0% | |
| GCCAACACAAGAAGAGTCTG+AGG | + | chr8_4:9258679-9258698 | Msa1312260:CDS | 50.0% | |
| TTCGCTATGGGGTTCATGGT+AGG | - | chr8_4:9258722-9258741 | None:intergenic | 50.0% | |
| CAAGTTCGCTATGGGGTTCA+TGG | - | chr8_4:9258726-9258745 | None:intergenic | 50.0% | |
| TGAACCCCATAGCGAACTTG+TGG | + | chr8_4:9258726-9258745 | Msa1312260:CDS | 50.0% | |
| GAACCCCATAGCGAACTTGT+GGG | + | chr8_4:9258727-9258746 | Msa1312260:CDS | 50.0% | |
| AACCCCATAGCGAACTTGTG+GGG | + | chr8_4:9258728-9258747 | Msa1312260:CDS | 50.0% | |
| ATCCCCACAAGTTCGCTATG+GGG | - | chr8_4:9258733-9258752 | None:intergenic | 50.0% | |
| CATCCCCACAAGTTCGCTAT+GGG | - | chr8_4:9258734-9258753 | None:intergenic | 50.0% | |
| TCATCCCCACAAGTTCGCTA+TGG | - | chr8_4:9258735-9258754 | None:intergenic | 50.0% | |
| !! | AACTGCTCTGAAATCGGCGG+TGG | + | chr8_4:9250194-9250213 | Msa1312260:five_prime_UTR | 55.0% |
| ! | TCTGAAATCGGCGGTGGAGT+TGG | + | chr8_4:9250200-9250219 | Msa1312260:five_prime_UTR | 55.0% |
| GGCATGCAATCGCGGAATTG+CGG | - | chr8_4:9250235-9250254 | None:intergenic | 55.0% | |
| ! | TTGGGTTTCAGGTGCAGCAG+TGG | + | chr8_4:9251259-9251278 | Msa1312260:intron | 55.0% |
| ACAACTAGGTTCAGCCCCTC+AGG | - | chr8_4:9251330-9251349 | None:intergenic | 55.0% | |
| GGATTTGGGCCTCGTCGATA+TGG | + | chr8_4:9252716-9252735 | Msa1312260:intron | 55.0% | |
| !! | CTATGGCGGATGACGGTATG+TGG | - | chr8_4:9252834-9252853 | None:intergenic | 55.0% |
| CCTAGGTTGTAGGCAACCTC+GGG | + | chr8_4:9253332-9253351 | Msa1312260:intron | 55.0% | |
| AGGCAACCTCGGGAAACCTA+AGG | + | chr8_4:9253342-9253361 | Msa1312260:intron | 55.0% | |
| ! | CTAGTTTCGGCTAGCCAAGC+CGG | + | chr8_4:9253610-9253629 | Msa1312260:intron | 55.0% |
| ! | GGGCGGTTTGCTTCTATGAG+AGG | + | chr8_4:9255646-9255665 | Msa1312260:intron | 55.0% |
| ! | GTGGTGAGGAAGGATGATGG+TGG | + | chr8_4:9255772-9255791 | Msa1312260:intron | 55.0% |
| ! | GATGGTGGCCGATGGTGTAA+AGG | + | chr8_4:9255787-9255806 | Msa1312260:intron | 55.0% |
| GCCGATGGTGTAAAGGGAGA+AGG | + | chr8_4:9255794-9255813 | Msa1312260:intron | 55.0% | |
| CGGGAGGAATTGGAGTTGTG+CGG | + | chr8_4:9257323-9257342 | Msa1312260:intron | 55.0% | |
| GGGAGGAATTGGAGTTGTGC+GGG | + | chr8_4:9257324-9257343 | Msa1312260:intron | 55.0% | |
| ACGCTTTCATGGTCCAGACC+AGG | + | chr8_4:9257489-9257508 | Msa1312260:intron | 55.0% | |
| !! | CTCTGAAGCTTCCAACGGGA+TGG | - | chr8_4:9258000-9258019 | None:intergenic | 55.0% |
| CGCTATCATGTTCCCTCCTC+TGG | - | chr8_4:9258445-9258464 | None:intergenic | 55.0% | |
| ! | GCACAGTCCGTGCTGATCTG+TGG | + | chr8_4:9252867-9252886 | Msa1312260:intron | 60.0% |
| CCCGAGGTTGCCTACAACCT+AGG | - | chr8_4:9253335-9253354 | None:intergenic | 60.0% | |
| GGCGATCCTTAGGTTTCCCG+AGG | - | chr8_4:9253351-9253370 | None:intergenic | 60.0% | |
| !! | GGAAGGATGATGGTGGCCGA+TGG | + | chr8_4:9255779-9255798 | Msa1312260:intron | 60.0% |
| TTGTTGGGCACTTCAGCGGG+AGG | + | chr8_4:9257307-9257326 | Msa1312260:intron | 60.0% | |
| GGCACTTCAGCGGGAGGAAT+TGG | + | chr8_4:9257313-9257332 | Msa1312260:intron | 60.0% | |
| GCGACAGAGATCCATCCCGT+TGG | + | chr8_4:9257986-9258005 | Msa1312260:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 9250140 | 9259035 | 9250140 | ID=Msa1312260;Name=Msa1312260 |
| chr8_4 | mRNA | 9250140 | 9259035 | 9250140 | ID=Msa1312260-mRNA-1;Parent=Msa1312260;Name=Msa1312260-mRNA-1;_AED=0.28;_eAED=0.28;_QI=173|0.83|1|1|0.5|0.57|7|281|226 |
| chr8_4 | exon | 9250140 | 9250366 | 9250140 | ID=Msa1312260-mRNA-1:exon:3406;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9251270 | 9251408 | 9251270 | ID=Msa1312260-mRNA-1:exon:3407;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9256213 | 9256276 | 9256213 | ID=Msa1312260-mRNA-1:exon:3408;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9256591 | 9256642 | 9256591 | ID=Msa1312260-mRNA-1:exon:3409;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9257918 | 9258061 | 9257918 | ID=Msa1312260-mRNA-1:exon:3410;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9258395 | 9258514 | 9258395 | ID=Msa1312260-mRNA-1:exon:3411;Parent=Msa1312260-mRNA-1 |
| chr8_4 | exon | 9258647 | 9259035 | 9258647 | ID=Msa1312260-mRNA-1:exon:3412;Parent=Msa1312260-mRNA-1 |
| chr8_4 | five_prime_UTR | 9250140 | 9250312 | 9250140 | ID=Msa1312260-mRNA-1:five_prime_utr;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9250313 | 9250366 | 9250313 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9251270 | 9251408 | 9251270 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9256213 | 9256276 | 9256213 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9256591 | 9256642 | 9256591 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9257918 | 9258061 | 9257918 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9258395 | 9258514 | 9258395 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | CDS | 9258647 | 9258754 | 9258647 | ID=Msa1312260-mRNA-1:cds;Parent=Msa1312260-mRNA-1 |
| chr8_4 | three_prime_UTR | 9258755 | 9259035 | 9258755 | ID=Msa1312260-mRNA-1:three_prime_utr;Parent=Msa1312260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
