Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231560 | XP_013444186.1 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 3.45e-154 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231560 | sp|Q9XI47|SHH1_ARATH | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.04e-51 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231560 | A0A072TMY2 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 1.65e-154 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0089540 | Msa1231560 | 0.815684 | 8.151213e-52 | -8.615850e-47 |
| Msa1231560 | Msa1251410 | 0.805100 | 1.570987e-49 | -8.615850e-47 |
| Msa1231560 | Msa1274080 | 0.808954 | 2.402807e-50 | -8.615850e-47 |
| Msa1231560 | Msa1312260 | 0.872153 | 3.958985e-67 | -8.615850e-47 |
| Msa1231560 | Msa1352580 | 0.800761 | 1.238167e-48 | -8.615850e-47 |
| Msa0384590 | Msa1231560 | 0.809320 | 2.006137e-50 | -8.615850e-47 |
| Msa0421220 | Msa1231560 | -0.822453 | 2.349750e-53 | -8.615850e-47 |
| Msa0434660 | Msa1231560 | 0.807780 | 4.276956e-50 | -8.615850e-47 |
| Msa1038860 | Msa1231560 | 0.800240 | 1.581133e-48 | -8.615850e-47 |
| Msa0355080 | Msa1231560 | -0.804946 | 1.691844e-49 | -8.615850e-47 |
| Msa1197720 | Msa1231560 | 0.809526 | 1.811931e-50 | -8.615850e-47 |
| Msa0522540 | Msa1231560 | 0.806171 | 9.361827e-50 | -8.615850e-47 |
| Msa0579080 | Msa1231560 | 0.815230 | 1.028274e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231560 | MtrunA17_Chr8g0340501 | 81.481 | 270 | 6 | 1 | 1 | 226 | 1 | 270 | 3.17e-158 | 439 |
| Msa1231560 | MtrunA17_Chr3g0140441 | 41.791 | 201 | 96 | 2 | 4 | 203 | 50 | 230 | 2.41e-47 | 156 |
| Msa1231560 | MtrunA17_Chr8g0360221 | 42.786 | 201 | 104 | 2 | 14 | 203 | 58 | 258 | 3.46e-46 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231560 | AT1G15215.2 | 45.729 | 199 | 99 | 2 | 14 | 203 | 58 | 256 | 2.07e-52 | 170 |
| Msa1231560 | AT1G15215.3 | 46.154 | 195 | 94 | 3 | 14 | 197 | 58 | 252 | 1.83e-49 | 162 |
| Msa1231560 | AT1G15215.4 | 47.541 | 183 | 87 | 2 | 18 | 191 | 62 | 244 | 6.60e-49 | 161 |
| Msa1231560 | AT3G18380.1 | 42.791 | 215 | 98 | 4 | 14 | 203 | 58 | 272 | 3.33e-46 | 157 |
| Msa1231560 | AT3G18380.3 | 42.254 | 213 | 100 | 4 | 14 | 203 | 58 | 270 | 2.86e-45 | 154 |
| Msa1231560 | AT3G18380.2 | 42.593 | 216 | 98 | 5 | 14 | 203 | 58 | 273 | 3.68e-45 | 154 |
| Msa1231560 | AT1G15215.1 | 41.053 | 95 | 47 | 2 | 18 | 103 | 62 | 156 | 3.34e-11 | 60.1 |
Find 79 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTCTGTATGTTTATTT+TGG | 0.149207 | 8_2:+7796934 | None:intergenic |
| AACCTAGTTGTTGATCTTTC+GGG | 0.178153 | 8_2:-7796879 | Msa1231560:CDS |
| GGGCAAATCTTCTTCGATAA+AGG | 0.250524 | 8_2:-7796859 | Msa1231560:CDS |
| GAACCTAGTTGTTGATCTTT+CGG | 0.267556 | 8_2:-7796880 | Msa1231560:CDS |
| GAATGGATTAATGTGAAATA+TGG | 0.288200 | 8_2:-7793066 | Msa1231560:CDS |
| CGCTATCATGTTCCCTCCTC+TGG | 0.309106 | 8_2:+7792584 | None:intergenic |
| GGCAAATCTTCTTCGATAAA+GGG | 0.350226 | 8_2:-7796858 | Msa1231560:CDS |
| AGCTGCAGATCTGTCAGAAT+TGG | 0.391553 | 8_2:-7794907 | Msa1231560:CDS |
| CTATTGAGTAAAGATCTTCT+TGG | 0.392507 | 8_2:+7792101 | None:intergenic |
| CATCCCCACAAGTTCGCTAT+GGG | 0.406353 | 8_2:+7792295 | None:intergenic |
| CAAGTTCGCTATGGGGTTCA+TGG | 0.408654 | 8_2:+7792303 | None:intergenic |
| TGAAGTGAATCGTGCTGCTT+TGG | 0.419818 | 8_2:+7797927 | None:intergenic |
| ACCTCAGACTCTTCTTGTGT+TGG | 0.421940 | 8_2:+7792346 | None:intergenic |
| CACTTTGCTTTATCACCTGA+GGG | 0.424676 | 8_2:-7796906 | Msa1231560:CDS |
| AGTCATGTGTATCCGTTGTA+AGG | 0.427104 | 8_2:-7792152 | Msa1231560:three_prime_UTR |
| AATGGATTAATGTGAAATAT+GGG | 0.432813 | 8_2:-7793065 | Msa1231560:CDS |
| CATGGTAGGTTCTAATTCAA+AGG | 0.438209 | 8_2:+7792321 | None:intergenic |
| GAACTCAACTGCTCGGAAAT+CGG | 0.438641 | 8_2:-7797992 | Msa1231560:five_prime_UTR |
| TGACTTGATTCAAATTAGTC+AGG | 0.450579 | 8_2:+7792170 | None:intergenic |
| ATAAGTATAGTCGTGATTGT+AGG | 0.455631 | 8_2:-7792044 | Msa1231560:three_prime_UTR |
| AATAAAATTACAAAGTTAAG+TGG | 0.456885 | 8_2:-7798020 | Msa1231560:five_prime_UTR |
| ATACAATAGCATCACAATAG+AGG | 0.459718 | 8_2:+7792614 | None:intergenic |
| TCGGAAATCGGCGGTGGAGT+TGG | 0.466737 | 8_2:-7797980 | Msa1231560:five_prime_UTR |
| TCATCCCCACAAGTTCGCTA+TGG | 0.466754 | 8_2:+7792294 | None:intergenic |
| ATGGTAGGTTCTAATTCAAA+GGG | 0.467786 | 8_2:+7792322 | None:intergenic |
| GACACTCTGAAGCTTCCAAC+GGG | 0.471475 | 8_2:+7793025 | None:intergenic |
| GAAGTTCGTGTACGATATCA+TGG | 0.474345 | 8_2:-7793108 | Msa1231560:CDS |
| GTTGGGACAGTTTGTGCTGT+AGG | 0.490372 | 8_2:-7792369 | Msa1231560:CDS |
| AACTGCTCGGAAATCGGCGG+TGG | 0.490944 | 8_2:-7797986 | Msa1231560:five_prime_UTR |
| CAGACTTGTCATGGTAAAAC+CGG | 0.492608 | 8_2:+7792536 | None:intergenic |
| ACAACTAGGTTCAGCCCCTC+AGG | 0.495898 | 8_2:+7796891 | None:intergenic |
| AAGATCTTTACTCAATAGAC+TGG | 0.497612 | 8_2:-7792096 | Msa1231560:three_prime_UTR |
| ACCTCGTCTAAAGAGAGCTT+AGG | 0.500697 | 8_2:+7797838 | None:intergenic |
| TTGGCAGGAAGAAGTTCGTT+GGG | 0.502315 | 8_2:-7792386 | Msa1231560:intron |
| GTAGCTGCATCTTCACTGTC+CGG | 0.504908 | 8_2:-7792555 | Msa1231560:CDS |
| CGTGTACGATATCATGGATT+CGG | 0.506096 | 8_2:-7793102 | Msa1231560:CDS |
| AAATAAACATACAGAGTCAA+AGG | 0.511141 | 8_2:-7796931 | Msa1231560:CDS |
| AACTACAGAGTTCTATGCAC+AGG | 0.512186 | 8_2:-7794514 | Msa1231560:CDS |
| TCACTTTGCTTTATCACCTG+AGG | 0.516843 | 8_2:-7796907 | Msa1231560:CDS |
| TTGGGTTTCAGGTGCAGCAG+TGG | 0.521043 | 8_2:-7796959 | Msa1231560:intron |
| TCGGTAAGGATGAAGATGAA+TGG | 0.521822 | 8_2:-7793083 | Msa1231560:CDS |
| CAAGAAATACAGTTCCCTAA+AGG | 0.523819 | 8_2:+7792233 | None:intergenic |
| AAAAGCTCTCCAAAACCAAA+AGG | 0.532507 | 8_2:-7796831 | Msa1231560:intron |
| TTTGGCAGGAAGAAGTTCGT+TGG | 0.535920 | 8_2:-7792387 | Msa1231560:intron |
| GGCATGCAATCGCAGAATTG+CGG | 0.537688 | 8_2:+7797948 | None:intergenic |
| TTCGCTATGGGGTTCATGGT+AGG | 0.542458 | 8_2:+7792307 | None:intergenic |
| CTCTGAAGCTTCCAACGGGA+TGG | 0.544158 | 8_2:+7793029 | None:intergenic |
| GAACCCCATAGCGAACTTGT+GGG | 0.545514 | 8_2:-7792299 | Msa1231560:CDS |
| TTCAGAGTGTCACAAGGTGA+AGG | 0.548383 | 8_2:-7793013 | Msa1231560:CDS |
| TATCTATAAAAGACAATGCA+TGG | 0.556904 | 8_2:-7794872 | Msa1231560:intron |
| AATAAACATACAGAGTCAAA+GGG | 0.557520 | 8_2:-7796930 | Msa1231560:CDS |
| TACAATAGCATCACAATAGA+GGG | 0.559629 | 8_2:+7792615 | None:intergenic |
| TGAACCCCATAGCGAACTTG+TGG | 0.569394 | 8_2:-7792300 | Msa1231560:CDS |
| GGCAACTGAACTCAACTGCT+CGG | 0.573992 | 8_2:-7797999 | Msa1231560:five_prime_UTR |
| CGTTGTAAGGGATCTCTATG+AGG | 0.574147 | 8_2:-7792139 | Msa1231560:three_prime_UTR |
| GTCAGAATTGGCATTTGAAG+CGG | 0.578951 | 8_2:-7794895 | Msa1231560:CDS |
| TCAAAATCTTCTTATTCACA+TGG | 0.579129 | 8_2:+7792203 | None:intergenic |
| AGATCACCTCAGACTTGTCA+TGG | 0.581330 | 8_2:+7792527 | None:intergenic |
| ACGATATCATGGATTCGGTA+AGG | 0.582236 | 8_2:-7793097 | Msa1231560:CDS |
| GTCATGTGTATCCGTTGTAA+GGG | 0.583368 | 8_2:-7792151 | Msa1231560:three_prime_UTR |
| TGACACTCTGAAGCTTCCAA+CGG | 0.596601 | 8_2:+7793024 | None:intergenic |
| TCCTAAGCTCTCTTTAGACG+AGG | 0.605342 | 8_2:-7797839 | Msa1231560:intron |
| TGTATTGAAAATCCAGAGGA+GGG | 0.612784 | 8_2:-7792596 | Msa1231560:CDS |
| GAGTGTCACAAGGTGAAGGA+AGG | 0.613478 | 8_2:-7793009 | Msa1231560:CDS |
| TTGTATTGAAAATCCAGAGG+AGG | 0.615133 | 8_2:-7792597 | Msa1231560:CDS |
| GCGACAGAGATCCATCCCGT+TGG | 0.618217 | 8_2:-7793040 | Msa1231560:CDS |
| ATCCCCACAAGTTCGCTATG+GGG | 0.619916 | 8_2:+7792296 | None:intergenic |
| TGCCCGAAAGATCAACAACT+AGG | 0.621038 | 8_2:+7796877 | None:intergenic |
| ACTACAGAGTTCTATGCACA+GGG | 0.642918 | 8_2:-7794513 | Msa1231560:CDS |
| GCCAACACAAGAAGAGTCTG+AGG | 0.651201 | 8_2:-7792347 | Msa1231560:CDS |
| ACTTTGCTTTATCACCTGAG+GGG | 0.653399 | 8_2:-7796905 | Msa1231560:CDS |
| CTCAACTGCTCGGAAATCGG+CGG | 0.661784 | 8_2:-7797989 | Msa1231560:five_prime_UTR |
| AACCCCATAGCGAACTTGTG+GGG | 0.664375 | 8_2:-7792298 | Msa1231560:CDS |
| CTCATAGAGATCCCTTACAA+CGG | 0.667367 | 8_2:+7792140 | None:intergenic |
| GGAAGCTTCAGAGTGTCACA+AGG | 0.669493 | 8_2:-7793019 | Msa1231560:CDS |
| ATGGATTAATGTGAAATATG+GGG | 0.705458 | 8_2:-7793064 | Msa1231560:CDS |
| TGGTAGGTTCTAATTCAAAG+GGG | 0.708779 | 8_2:+7792323 | None:intergenic |
| CTATTGTATTGAAAATCCAG+AGG | 0.723013 | 8_2:-7792600 | Msa1231560:CDS |
| CTACAGAGTTCTATGCACAG+GGG | 0.821056 | 8_2:-7794512 | Msa1231560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATCTTTTTTTTTAACA+AGG | + | chr8_2:7793929-7793948 | None:intergenic | 10.0% |
| !!! | ATATTATTATTATTTTCTTC+AGG | + | chr8_2:7794381-7794400 | None:intergenic | 10.0% |
| !! | TTTATGTAAGTAAAATAAAA+AGG | + | chr8_2:7797106-7797125 | None:intergenic | 10.0% |
| !! | AATAAAATTACAAAGTTAAG+TGG | - | chr8_2:7792033-7792052 | Msa1231560:three_prime_UTR | 15.0% |
| !! | AAAACAAAATAAATTCAAAC+CGG | + | chr8_2:7792789-7792808 | None:intergenic | 15.0% |
| !! | TTATCTTGATGTTTATATAT+CGG | + | chr8_2:7793901-7793920 | None:intergenic | 15.0% |
| !!! | TATTATTGGTATTTCTTTTT+TGG | + | chr8_2:7794408-7794427 | None:intergenic | 15.0% |
| !! | TGATTATCATTTATTAATTC+TGG | + | chr8_2:7794503-7794522 | None:intergenic | 15.0% |
| !!! | GAGATATTTTAATTATATTG+TGG | + | chr8_2:7794748-7794767 | None:intergenic | 15.0% |
| !! | ACAAATAATGATGAAACAAA+GGG | + | chr8_2:7792317-7792336 | None:intergenic | 20.0% |
| !! | TACAAATAATGATGAAACAA+AGG | + | chr8_2:7792318-7792337 | None:intergenic | 20.0% |
| !!! | TTAGGTGAATTCAATTTTTT+CGG | - | chr8_2:7792421-7792440 | Msa1231560:intron | 20.0% |
| !!! | ATAAGTTTGTTTCATAATTC+AGG | + | chr8_2:7792753-7792772 | None:intergenic | 20.0% |
| !! | ACTTATAGATTATACAAAAC+CGG | - | chr8_2:7792767-7792786 | Msa1231560:intron | 20.0% |
| !!! | TTTATTTTGTTGTCATTACT+AGG | - | chr8_2:7793356-7793375 | Msa1231560:intron | 20.0% |
| !!! | TATTTTCTTGAAATTGAAGT+TGG | + | chr8_2:7793760-7793779 | None:intergenic | 20.0% |
| !!! | TTTTAAATGTTCCAAATCTT+TGG | - | chr8_2:7793780-7793799 | Msa1231560:intron | 20.0% |
| !!! | CACAATATTTCTTTTATACA+CGG | - | chr8_2:7794173-7794192 | Msa1231560:intron | 20.0% |
| !! | ACAACTGTGATAATTATTAT+TGG | + | chr8_2:7794422-7794441 | None:intergenic | 20.0% |
| !! | AAATATCTCATCATAATGTT+AGG | - | chr8_2:7794759-7794778 | Msa1231560:intron | 20.0% |
| !! | TTGTATTATCGAATAAGAAA+AGG | + | chr8_2:7795033-7795052 | None:intergenic | 20.0% |
| !!! | TGTGACATTTTTAAACATTT+TGG | - | chr8_2:7795263-7795282 | Msa1231560:intron | 20.0% |
| !! | ACTAAATAACTAACCAAAAA+AGG | + | chr8_2:7795455-7795474 | None:intergenic | 20.0% |
| !!! | GAAAATAAAAAAGCATCAAA+AGG | + | chr8_2:7795488-7795507 | None:intergenic | 20.0% |
| !!! | CTTTTTTATTTTCCAATTAC+AGG | - | chr8_2:7795495-7795514 | Msa1231560:intron | 20.0% |
| !!! | GTAAGATTCTTTTATATCTT+TGG | - | chr8_2:7795569-7795588 | Msa1231560:intron | 20.0% |
| !! | TATTTGAAGAAAAATAAGGA+AGG | + | chr8_2:7795669-7795688 | None:intergenic | 20.0% |
| !! | AAAGAATCAAATACAAAAAC+AGG | + | chr8_2:7795692-7795711 | None:intergenic | 20.0% |
| !! | TAGTTTCTATTGCTTAAAAA+AGG | + | chr8_2:7795855-7795874 | None:intergenic | 20.0% |
| !! | CAAATTGTACTATGTAAAAA+TGG | - | chr8_2:7796141-7796160 | Msa1231560:intron | 20.0% |
| !! | TCTTATACATAGTACTATTT+GGG | + | chr8_2:7796248-7796267 | None:intergenic | 20.0% |
| !!! | TATATGGATTTCTAATGTTT+TGG | + | chr8_2:7796297-7796316 | None:intergenic | 20.0% |
| !! | GTGGAAATGAAAATAAAAAT+CGG | - | chr8_2:7796605-7796624 | Msa1231560:intron | 20.0% |
| !!! | TTAAAAATCATTTTGGAACA+GGG | + | chr8_2:7796694-7796713 | None:intergenic | 20.0% |
| !!! | ATTAAAAATCATTTTGGAAC+AGG | + | chr8_2:7796695-7796714 | None:intergenic | 20.0% |
| !!! | CATGGTATTAAAAATCATTT+TGG | + | chr8_2:7796701-7796720 | None:intergenic | 20.0% |
| !!! | AAGTTTCCATTATTTTTCAA+TGG | + | chr8_2:7796765-7796784 | None:intergenic | 20.0% |
| !! | GTTCATAAGTATACAAATAT+AGG | + | chr8_2:7796812-7796831 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGGTATATTAT+GGG | - | chr8_2:7796875-7796894 | Msa1231560:CDS | 20.0% |
| !!! | AATGGATTAATGTGAAATAT+GGG | - | chr8_2:7796988-7797007 | Msa1231560:intron | 20.0% |
| !! | AAGAAAAAAAAACTACGTTT+GGG | + | chr8_2:7797331-7797350 | None:intergenic | 20.0% |
| !! | AAAGAAAAAAAAACTACGTT+TGG | + | chr8_2:7797332-7797351 | None:intergenic | 20.0% |
| !!! | TTTTATTTTTCACAAGATAC+TGG | - | chr8_2:7798037-7798056 | Msa1231560:five_prime_UTR | 20.0% |
| ! | AAGAAACAGAAGATTGAAAA+AGG | + | chr8_2:7792260-7792279 | None:intergenic | 25.0% |
| ! | TCATCATTATTTGTAGATAC+TGG | - | chr8_2:7792323-7792342 | Msa1231560:CDS | 25.0% |
| ! | TTATTTGTAGATACTGGAAT+TGG | - | chr8_2:7792329-7792348 | Msa1231560:CDS | 25.0% |
| ! | GAAAGAATTTACAATGATGT+TGG | - | chr8_2:7792351-7792370 | Msa1231560:CDS | 25.0% |
| ! | TCTACTGAAATAAGTACTTA+TGG | - | chr8_2:7792472-7792491 | Msa1231560:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr8_2:7792872-7792891 | Msa1231560:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr8_2:7792873-7792892 | Msa1231560:intron | 25.0% |
| ! | AAATAATGAACGTAACACAA+AGG | + | chr8_2:7792899-7792918 | None:intergenic | 25.0% |
| !! | TTGACTCTGTATGTTTATTT+TGG | + | chr8_2:7793122-7793141 | None:intergenic | 25.0% |
| ! | AAATAAACATACAGAGTCAA+AGG | - | chr8_2:7793122-7793141 | Msa1231560:intron | 25.0% |
| ! | AATAAACATACAGAGTCAAA+GGG | - | chr8_2:7793123-7793142 | Msa1231560:intron | 25.0% |
| ! | TTAAAAGCTAAGAGCAAAAA+AGG | + | chr8_2:7793252-7793271 | None:intergenic | 25.0% |
| ! | TGTTGCTATGAATTCAAAAA+AGG | - | chr8_2:7793272-7793291 | Msa1231560:intron | 25.0% |
| ! | ATGACACACTTTATCTTTAT+AGG | - | chr8_2:7793533-7793552 | Msa1231560:intron | 25.0% |
| ! | ACATTTCTATACCAAAGATT+TGG | + | chr8_2:7793794-7793813 | None:intergenic | 25.0% |
| !! | TTCAATTTCTTAAGAAGCAT+CGG | + | chr8_2:7793822-7793841 | None:intergenic | 25.0% |
| ! | TAAGAAATTGAATACCTCAA+TGG | - | chr8_2:7793830-7793849 | Msa1231560:intron | 25.0% |
| !! | ACATAGATTTAGCCTATTTT+CGG | - | chr8_2:7794449-7794468 | Msa1231560:intron | 25.0% |
| !! | ATCATTTTCTATGTTAGTCA+TGG | - | chr8_2:7794935-7794954 | Msa1231560:intron | 25.0% |
| !! | TCATTTTCTATGTTAGTCAT+GGG | - | chr8_2:7794936-7794955 | Msa1231560:intron | 25.0% |
| ! | TAAATAGCAGAAAAAAGAAG+GGG | + | chr8_2:7795081-7795100 | None:intergenic | 25.0% |
| ! | GTAAATAGCAGAAAAAAGAA+GGG | + | chr8_2:7795082-7795101 | None:intergenic | 25.0% |
| ! | AGTAAATAGCAGAAAAAAGA+AGG | + | chr8_2:7795083-7795102 | None:intergenic | 25.0% |
| ! | TATCTATAAAAGACAATGCA+TGG | - | chr8_2:7795181-7795200 | Msa1231560:intron | 25.0% |
| ! | AACTAACCAAAAAAGGTTAA+TGG | + | chr8_2:7795448-7795467 | None:intergenic | 25.0% |
| ! | CAGGTATTTGAAGAAAAATA+AGG | + | chr8_2:7795673-7795692 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTGCTTAAAACA+TGG | - | chr8_2:7795710-7795729 | Msa1231560:intron | 25.0% |
| ! | TTTCATTTGAATTGCATGTT+AGG | - | chr8_2:7795761-7795780 | Msa1231560:intron | 25.0% |
| ! | TTATACATAGTACTATTTGG+GGG | + | chr8_2:7796246-7796265 | None:intergenic | 25.0% |
| ! | CTTATACATAGTACTATTTG+GGG | + | chr8_2:7796247-7796266 | None:intergenic | 25.0% |
| ! | CTCTTATACATAGTACTATT+TGG | + | chr8_2:7796249-7796268 | None:intergenic | 25.0% |
| ! | TTCAGAAAAATCTCATTGTT+GGG | - | chr8_2:7796321-7796340 | Msa1231560:intron | 25.0% |
| !! | GGTATCATGCTTTTATAATA+AGG | + | chr8_2:7796476-7796495 | None:intergenic | 25.0% |
| ! | TAAATTCACAAGTTATGTGA+TGG | - | chr8_2:7796640-7796659 | Msa1231560:intron | 25.0% |
| !!! | TTCCATTATTTTTCAATGGA+CGG | + | chr8_2:7796761-7796780 | None:intergenic | 25.0% |
| !! | AAAATTATTGCTGTTCTTAG+AGG | - | chr8_2:7796852-7796871 | Msa1231560:CDS | 25.0% |
| !! | GATGTTCTTTTGGTATATTA+TGG | - | chr8_2:7796874-7796893 | Msa1231560:CDS | 25.0% |
| !!! | GAATGGATTAATGTGAAATA+TGG | - | chr8_2:7796987-7797006 | Msa1231560:intron | 25.0% |
| !! | ATGGATTAATGTGAAATATG+GGG | - | chr8_2:7796989-7797008 | Msa1231560:intron | 25.0% |
| ! | TTGGATATGTGTTTGTATAT+GGG | + | chr8_2:7797269-7797288 | None:intergenic | 25.0% |
| ! | TTTGGATATGTGTTTGTATA+TGG | + | chr8_2:7797270-7797289 | None:intergenic | 25.0% |
| ! | ACCTGTGCAAAATTAATAAA+GGG | + | chr8_2:7797404-7797423 | None:intergenic | 25.0% |
| ! | TACCTGTGCAAAATTAATAA+AGG | + | chr8_2:7797405-7797424 | None:intergenic | 25.0% |
| !! | GTTTTTGTTAAAAAGAAGCA+AGG | + | chr8_2:7797559-7797578 | None:intergenic | 25.0% |
| !! | GGGAAGTACAAAATAAAAAT+TGG | + | chr8_2:7797792-7797811 | None:intergenic | 25.0% |
| ! | TCAAAATCTTCTTATTCACA+TGG | + | chr8_2:7797853-7797872 | None:intergenic | 25.0% |
| TGAAAAAGGTGAAATGAGAA+TGG | + | chr8_2:7792246-7792265 | None:intergenic | 30.0% | |
| AGAATTTACAATGATGTTGG+AGG | - | chr8_2:7792354-7792373 | Msa1231560:CDS | 30.0% | |
| ! | AGGATATTGCTGCAAATTTT+AGG | - | chr8_2:7792403-7792422 | Msa1231560:intron | 30.0% |
| !! | AAGCTATTTTGAAGAGCTTA+TGG | - | chr8_2:7792657-7792676 | Msa1231560:intron | 30.0% |
| ATGAATATGTCAATCCAAAC+AGG | + | chr8_2:7792699-7792718 | None:intergenic | 30.0% | |
| CTGCAAAATCAAAAACAAGT+AGG | + | chr8_2:7792940-7792959 | None:intergenic | 30.0% | |
| ATGGTAAAACTTCTTTATCG+TGG | - | chr8_2:7792977-7792996 | Msa1231560:intron | 30.0% | |
| TGGTAAAACTTCTTTATCGT+GGG | - | chr8_2:7792978-7792997 | Msa1231560:intron | 30.0% | |
| ! | TCTGAATCTCTGATACATTT+TGG | - | chr8_2:7793029-7793048 | Msa1231560:CDS | 30.0% |
| !!! | TGATACATTTTGGAGTGTAT+GGG | - | chr8_2:7793039-7793058 | Msa1231560:CDS | 30.0% |
| !!! | AAAGGAAAACCTTTTGGTTT+TGG | + | chr8_2:7793234-7793253 | None:intergenic | 30.0% |
| ! | AGCAAAAAAGGAAAACCTTT+TGG | + | chr8_2:7793240-7793259 | None:intergenic | 30.0% |
| GCTATGAATTCAAAAAAGGA+AGG | - | chr8_2:7793276-7793295 | Msa1231560:intron | 30.0% | |
| TTTGTTAGTTCAGACAAAGA+TGG | - | chr8_2:7793410-7793429 | Msa1231560:intron | 30.0% | |
| AGAAAATGAGAGAGAATGAA+AGG | - | chr8_2:7793471-7793490 | Msa1231560:intron | 30.0% | |
| ! | AAGCTGCATTTAAAACTTAC+TGG | + | chr8_2:7793575-7793594 | None:intergenic | 30.0% |
| TATAAGTAAGTATCTCACAG+AGG | + | chr8_2:7793692-7793711 | None:intergenic | 30.0% | |
| ! | AAATTGAAGTTGGTCAATCA+AGG | + | chr8_2:7793750-7793769 | None:intergenic | 30.0% |
| TAGACCAACAAAAAACATGA+AGG | - | chr8_2:7794225-7794244 | Msa1231560:intron | 30.0% | |
| TAGACCAACAAAAAACATGA+AGG | + | chr8_2:7794225-7794244 | None:intergenic | 30.0% | |
| ! | CAACAGATTTTCAATAACAC+TGG | + | chr8_2:7794529-7794548 | None:intergenic | 30.0% |
| ! | CAGTGTTATTGAAAATCTGT+TGG | - | chr8_2:7794527-7794546 | Msa1231560:CDS | 30.0% |
| TGTTATTGAAAATCTGTTGG+TGG | - | chr8_2:7794530-7794549 | Msa1231560:CDS | 30.0% | |
| TGCCTAAATTGCAGAAATTT+GGG | - | chr8_2:7794637-7794656 | Msa1231560:intron | 30.0% | |
| AACATAAATTTCCACACTGT+GGG | + | chr8_2:7794813-7794832 | None:intergenic | 30.0% | |
| TAACATAAATTTCCACACTG+TGG | + | chr8_2:7794814-7794833 | None:intergenic | 30.0% | |
| ACAGTGTGGAAATTTATGTT+AGG | - | chr8_2:7794813-7794832 | Msa1231560:intron | 30.0% | |
| GCTATTTGTGTAAGAGAATT+AGG | - | chr8_2:7794869-7794888 | Msa1231560:intron | 30.0% | |
| AAATAGCAGAAAAAAGAAGG+GGG | + | chr8_2:7795080-7795099 | None:intergenic | 30.0% | |
| ATTTACTCTTCTTCGATTTC+TGG | - | chr8_2:7795096-7795115 | Msa1231560:intron | 30.0% | |
| !!! | TCACAACCATTAACCTTTTT+TGG | - | chr8_2:7795439-7795458 | Msa1231560:intron | 30.0% |
| ! | TTTTGTCTCTTTCAACATAG+TGG | - | chr8_2:7795806-7795825 | Msa1231560:intron | 30.0% |
| TTTGTCTCTTTCAACATAGT+GGG | - | chr8_2:7795807-7795826 | Msa1231560:intron | 30.0% | |
| GAAAAGTGAATGTCAAACTT+TGG | - | chr8_2:7795881-7795900 | Msa1231560:intron | 30.0% | |
| CGCTTGATATGAAAAATATC+AGG | - | chr8_2:7795942-7795961 | Msa1231560:intron | 30.0% | |
| ATATGAAAAATATCAGGCAG+AGG | - | chr8_2:7795948-7795967 | Msa1231560:intron | 30.0% | |
| AACTCGCTATGATAGAAAAT+TGG | - | chr8_2:7796078-7796097 | Msa1231560:intron | 30.0% | |
| !!! | TCTAATGTTTTGGTGCTTTT+GGG | + | chr8_2:7796287-7796306 | None:intergenic | 30.0% |
| !!! | TTCTAATGTTTTGGTGCTTT+TGG | + | chr8_2:7796288-7796307 | None:intergenic | 30.0% |
| !!! | GATTTTTCTGAAGTGCTATA+TGG | + | chr8_2:7796313-7796332 | None:intergenic | 30.0% |
| CTTCAGAAAAATCTCATTGT+TGG | - | chr8_2:7796320-7796339 | Msa1231560:intron | 30.0% | |
| GTAGAACTTACGTTATATGT+GGG | - | chr8_2:7796375-7796394 | Msa1231560:intron | 30.0% | |
| ACTATTTAGCACAAGCAATT+GGG | + | chr8_2:7796410-7796429 | None:intergenic | 30.0% | |
| TGGCAATTATTTAGATCACA+TGG | + | chr8_2:7796719-7796738 | None:intergenic | 30.0% | |
| GAAATATCACAAACAATAGC+TGG | + | chr8_2:7796739-7796758 | None:intergenic | 30.0% | |
| TTCCGTCCATTGAAAAATAA+TGG | - | chr8_2:7796756-7796775 | Msa1231560:intron | 30.0% | |
| ! | AACAGCAATAATTTTACAGC+AGG | + | chr8_2:7796847-7796866 | None:intergenic | 30.0% |
| AGTTAATGTATGTTGTGATG+TGG | - | chr8_2:7796909-7796928 | Msa1231560:CDS | 30.0% | |
| TTGTACTATGTTTCCATGTA+AGG | - | chr8_2:7797072-7797091 | Msa1231560:intron | 30.0% | |
| TGTACTATGTTTCCATGTAA+GGG | - | chr8_2:7797073-7797092 | Msa1231560:intron | 30.0% | |
| TAAACATAATGTGTATCCAG+TGG | - | chr8_2:7797122-7797141 | Msa1231560:intron | 30.0% | |
| TTCATTTAACACACGTTTGA+TGG | - | chr8_2:7797234-7797253 | Msa1231560:intron | 30.0% | |
| TCATTTAACACACGTTTGAT+GGG | - | chr8_2:7797235-7797254 | Msa1231560:intron | 30.0% | |
| !! | AAAAGAAGTATCAACGGTTA+GGG | + | chr8_2:7797379-7797398 | None:intergenic | 30.0% |
| ! | ACCCTTTATTAATTTTGCAC+AGG | - | chr8_2:7797400-7797419 | Msa1231560:intron | 30.0% |
| TACAATAGCATCACAATAGA+GGG | + | chr8_2:7797441-7797460 | None:intergenic | 30.0% | |
| ATACAATAGCATCACAATAG+AGG | + | chr8_2:7797442-7797461 | None:intergenic | 30.0% | |
| CTATTGTATTGAAAATCCAG+AGG | - | chr8_2:7797453-7797472 | Msa1231560:intron | 30.0% | |
| ! | TATCATCTTTGGTAGTTGTT+AGG | - | chr8_2:7797602-7797621 | Msa1231560:intron | 30.0% |
| ! | ATGGTAGGTTCTAATTCAAA+GGG | + | chr8_2:7797734-7797753 | None:intergenic | 30.0% |
| !!! | ACTTCCCTTTTTTTTCCTTT+AGG | - | chr8_2:7797805-7797824 | Msa1231560:intron | 30.0% |
| !!! | CTTCCCTTTTTTTTCCTTTA+GGG | - | chr8_2:7797806-7797825 | Msa1231560:intron | 30.0% |
| GTTCCCTAAAGGAAAAAAAA+GGG | + | chr8_2:7797812-7797831 | None:intergenic | 30.0% | |
| AGTTCCCTAAAGGAAAAAAA+AGG | + | chr8_2:7797813-7797832 | None:intergenic | 30.0% | |
| TGACTTGATTCAAATTAGTC+AGG | + | chr8_2:7797886-7797905 | None:intergenic | 30.0% | |
| CTATTGAGTAAAGATCTTCT+TGG | + | chr8_2:7797955-7797974 | None:intergenic | 30.0% | |
| AAGATCTTTACTCAATAGAC+TGG | - | chr8_2:7797957-7797976 | Msa1231560:five_prime_UTR | 30.0% | |
| ATAAGTATAGTCGTGATTGT+AGG | - | chr8_2:7798009-7798028 | Msa1231560:five_prime_UTR | 30.0% | |
| GCAATATCCTTGCAGAAATT+GGG | + | chr8_2:7792393-7792412 | None:intergenic | 35.0% | |
| AGCAATATCCTTGCAGAAAT+TGG | + | chr8_2:7792394-7792413 | None:intergenic | 35.0% | |
| CAGAAGAGCTTAGTGAAATA+AGG | + | chr8_2:7792519-7792538 | None:intergenic | 35.0% | |
| CTTATTTCACTAAGCTCTTC+TGG | - | chr8_2:7792517-7792536 | Msa1231560:intron | 35.0% | |
| ATATTATTGCCGTTCCTGTT+TGG | - | chr8_2:7792682-7792701 | Msa1231560:intron | 35.0% | |
| TATGTCAATCCAAACAGGAA+CGG | + | chr8_2:7792694-7792713 | None:intergenic | 35.0% | |
| !!! | CTGATACATTTTGGAGTGTA+TGG | - | chr8_2:7793038-7793057 | Msa1231560:CDS | 35.0% |
| !! | TAATGATACCGCTGTTGTTT+TGG | - | chr8_2:7793075-7793094 | Msa1231560:CDS | 35.0% |
| !!! | AATGATACCGCTGTTGTTTT+GGG | - | chr8_2:7793076-7793095 | Msa1231560:CDS | 35.0% |
| GAACCTAGTTGTTGATCTTT+CGG | - | chr8_2:7793173-7793192 | Msa1231560:intron | 35.0% | |
| AACCTAGTTGTTGATCTTTC+GGG | - | chr8_2:7793174-7793193 | Msa1231560:intron | 35.0% | |
| GGCAAATCTTCTTCGATAAA+GGG | - | chr8_2:7793195-7793214 | Msa1231560:intron | 35.0% | |
| AAAAGCTCTCCAAAACCAAA+AGG | - | chr8_2:7793222-7793241 | Msa1231560:intron | 35.0% | |
| GGAAGAAAGAACTACATTAC+TGG | - | chr8_2:7793297-7793316 | Msa1231560:intron | 35.0% | |
| CTTTATCTTTATAGGCACCA+CGG | - | chr8_2:7793541-7793560 | Msa1231560:intron | 35.0% | |
| TTACTCTATAACCTACTAGC+TGG | - | chr8_2:7793614-7793633 | Msa1231560:intron | 35.0% | |
| TTGTCTCACTTTAGATTCGA+CGG | + | chr8_2:7794038-7794057 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | + | chr8_2:7794278-7794297 | None:intergenic | 35.0% |
| ! | CAAGTGTGTACCTTTTCATT+TGG | - | chr8_2:7794258-7794277 | Msa1231560:intron | 35.0% |
| ACATGAAGGTCCAAATGAAA+AGG | + | chr8_2:7794271-7794290 | None:intergenic | 35.0% | |
| !!! | TGGACCTTCATGTTTTTTGT+TGG | - | chr8_2:7794278-7794297 | Msa1231560:intron | 35.0% |
| GGTCTAAGTTAGCAAATTGT+AGG | - | chr8_2:7794299-7794318 | Msa1231560:intron | 35.0% | |
| GTTAGCAAATTGTAGGTCAT+AGG | - | chr8_2:7794306-7794325 | Msa1231560:intron | 35.0% | |
| ! | CTCAATTGGTTTCCGAAAAT+AGG | + | chr8_2:7794464-7794483 | None:intergenic | 35.0% |
| ! | ATTTTCGGAAACCAATTGAG+TGG | - | chr8_2:7794464-7794483 | Msa1231560:intron | 35.0% |
| TGCTTGTAATTCCACTCAAT+TGG | + | chr8_2:7794478-7794497 | None:intergenic | 35.0% | |
| !! | TGAAAATCTGTTGGTGGATT+TGG | - | chr8_2:7794536-7794555 | Msa1231560:CDS | 35.0% |
| !! | GAAAATCTGTTGGTGGATTT+GGG | - | chr8_2:7794537-7794556 | Msa1231560:CDS | 35.0% |
| CTGCCTAAATTGCAGAAATT+TGG | - | chr8_2:7794636-7794655 | Msa1231560:intron | 35.0% | |
| GACCCAAATTTCTGCAATTT+AGG | + | chr8_2:7794642-7794661 | None:intergenic | 35.0% | |
| TAATGTTAGGATCTCAACTG+TGG | - | chr8_2:7794772-7794791 | Msa1231560:intron | 35.0% | |
| AATGTTAGGATCTCAACTGT+GGG | - | chr8_2:7794773-7794792 | Msa1231560:intron | 35.0% | |
| ATGTTAGGAAAATGCTGATG+TGG | - | chr8_2:7794828-7794847 | Msa1231560:intron | 35.0% | |
| ATAAAAGACAATGCATGGTG+AGG | - | chr8_2:7795186-7795205 | Msa1231560:intron | 35.0% | |
| !!! | AATCTTTTTGGAGTGAAGAG+TGG | + | chr8_2:7795375-7795394 | None:intergenic | 35.0% |
| AAAGGTTAATGGTTGTGAAG+AGG | + | chr8_2:7795437-7795456 | None:intergenic | 35.0% | |
| !! | AAAAATAAGGAAGGCATTGC+AGG | + | chr8_2:7795660-7795679 | None:intergenic | 35.0% |
| TGTTTGTGCTTAAAACATGG+TGG | - | chr8_2:7795713-7795732 | Msa1231560:intron | 35.0% | |
| TGACGAAGCAAAGAATAATG+TGG | - | chr8_2:7795914-7795933 | Msa1231560:intron | 35.0% | |
| !! | TTTAGAATGCCTTTTTCTCG+TGG | + | chr8_2:7796215-7796234 | None:intergenic | 35.0% |
| GGTAGAACTTACGTTATATG+TGG | - | chr8_2:7796374-7796393 | Msa1231560:intron | 35.0% | |
| CACTATTTAGCACAAGCAAT+TGG | + | chr8_2:7796411-7796430 | None:intergenic | 35.0% | |
| GTAGAAAAGCTCTCTTTCTT+AGG | - | chr8_2:7796440-7796459 | Msa1231560:intron | 35.0% | |
| AGCATGATACCTTCTTCAAA+TGG | - | chr8_2:7796485-7796504 | Msa1231560:intron | 35.0% | |
| GCATGATACCTTCTTCAAAT+GGG | - | chr8_2:7796486-7796505 | Msa1231560:intron | 35.0% | |
| CCACAACTTAATGTAAGTCT+TGG | + | chr8_2:7796589-7796608 | None:intergenic | 35.0% | |
| ! | CCAAGACTTACATTAAGTTG+TGG | - | chr8_2:7796586-7796605 | Msa1231560:intron | 35.0% |
| ! | GTTCTTAGAGGATGTTCTTT+TGG | - | chr8_2:7796864-7796883 | Msa1231560:CDS | 35.0% |
| GAATGAAGTGTACACAAACA+CGG | + | chr8_2:7797164-7797183 | None:intergenic | 35.0% | |
| GTCTTGTAATGTGTGTGAAA+AGG | + | chr8_2:7797186-7797205 | None:intergenic | 35.0% | |
| AACGTGTGTTAAATGAACAC+AGG | + | chr8_2:7797231-7797250 | None:intergenic | 35.0% | |
| CATTTAACACACGTTTGATG+GGG | - | chr8_2:7797236-7797255 | Msa1231560:intron | 35.0% | |
| ATTTAACACACGTTTGATGG+GGG | - | chr8_2:7797237-7797256 | Msa1231560:intron | 35.0% | |
| TTGATATGTTGGCAACAAGT+CGG | + | chr8_2:7797308-7797327 | None:intergenic | 35.0% | |
| ATCAACGGTTAGGGAATTTA+TGG | + | chr8_2:7797370-7797389 | None:intergenic | 35.0% | |
| !! | CAAAAGAAGTATCAACGGTT+AGG | + | chr8_2:7797380-7797399 | None:intergenic | 35.0% |
| !! | AGGGTCAAAAGAAGTATCAA+CGG | + | chr8_2:7797385-7797404 | None:intergenic | 35.0% |
| TTGTATTGAAAATCCAGAGG+AGG | - | chr8_2:7797456-7797475 | Msa1231560:intron | 35.0% | |
| TGTATTGAAAATCCAGAGGA+GGG | - | chr8_2:7797457-7797476 | Msa1231560:intron | 35.0% | |
| TAGCATGAATGCTGATGATA+TGG | + | chr8_2:7797584-7797603 | None:intergenic | 35.0% | |
| AGCATTCATGCTATCATCTT+TGG | - | chr8_2:7797591-7797610 | Msa1231560:intron | 35.0% | |
| GTAGTTGTTAGGTAAATCCT+CGG | - | chr8_2:7797613-7797632 | Msa1231560:intron | 35.0% | |
| ACACATGAAACATCAGGTAA+AGG | + | chr8_2:7797645-7797664 | None:intergenic | 35.0% | |
| ! | TGGTAGGTTCTAATTCAAAG+GGG | + | chr8_2:7797733-7797752 | None:intergenic | 35.0% |
| ! | CATGGTAGGTTCTAATTCAA+AGG | + | chr8_2:7797735-7797754 | None:intergenic | 35.0% |
| CAAGAAATACAGTTCCCTAA+AGG | + | chr8_2:7797823-7797842 | None:intergenic | 35.0% | |
| ACTTGATCCCAATTTCTGCA+AGG | - | chr8_2:7792383-7792402 | Msa1231560:intron | 40.0% | |
| AGCTCTTCATCAAACAGTGA+TGG | - | chr8_2:7792958-7792977 | Msa1231560:intron | 40.0% | |
| AACTTCTTTATCGTGGGAAC+AGG | - | chr8_2:7792984-7793003 | Msa1231560:intron | 40.0% | |
| TCACTTTGCTTTATCACCTG+AGG | - | chr8_2:7793146-7793165 | Msa1231560:intron | 40.0% | |
| CACTTTGCTTTATCACCTGA+GGG | - | chr8_2:7793147-7793166 | Msa1231560:intron | 40.0% | |
| ACTTTGCTTTATCACCTGAG+GGG | - | chr8_2:7793148-7793167 | Msa1231560:intron | 40.0% | |
| GGGCAAATCTTCTTCGATAA+AGG | - | chr8_2:7793194-7793213 | Msa1231560:intron | 40.0% | |
| TACTAGGCATTCACTTGCTT+TGG | - | chr8_2:7793372-7793391 | Msa1231560:intron | 40.0% | |
| ACTAGGCATTCACTTGCTTT+GGG | - | chr8_2:7793373-7793392 | Msa1231560:intron | 40.0% | |
| !! | TTCACTTGCTTTGGGGTAAA+TGG | - | chr8_2:7793381-7793400 | Msa1231560:intron | 40.0% |
| TTCAGACAAAGATGGTATGC+AGG | - | chr8_2:7793418-7793437 | Msa1231560:intron | 40.0% | |
| GATGGTATGCAGGAAGAAAA+TGG | - | chr8_2:7793428-7793447 | Msa1231560:intron | 40.0% | |
| GATAAAGTGTGTCATGTGCA+TGG | + | chr8_2:7793528-7793547 | None:intergenic | 40.0% | |
| ATATAGATGCACCAGCTAGT+AGG | + | chr8_2:7793628-7793647 | None:intergenic | 40.0% | |
| AAGTATCTCACAGAGGTCTA+AGG | + | chr8_2:7793685-7793704 | None:intergenic | 40.0% | |
| AATCACAAGACTGACCATTG+AGG | + | chr8_2:7793847-7793866 | None:intergenic | 40.0% | |
| CGACAAAGCTGATCATTCAA+TGG | + | chr8_2:7793980-7793999 | None:intergenic | 40.0% | |
| ! | ATCAGCTTTGTCGCAAATTG+TGG | - | chr8_2:7793987-7794006 | Msa1231560:intron | 40.0% |
| AAACCCATACGTATTGAACC+CGG | - | chr8_2:7794112-7794131 | Msa1231560:intron | 40.0% | |
| AGAAATATTGTGTGTCGCAG+TGG | + | chr8_2:7794165-7794184 | None:intergenic | 40.0% | |
| ! | AAGGTACACACTTGCTAACT+TGG | + | chr8_2:7794252-7794271 | None:intergenic | 40.0% |
| ! | CTCATTTTGTCTCAACAACC+TGG | + | chr8_2:7794355-7794374 | None:intergenic | 40.0% |
| CAGGTTGTTGAGACAAAATG+AGG | - | chr8_2:7794353-7794372 | Msa1231560:intron | 40.0% | |
| TAAATGGCGGCAAATATTGC+AGG | - | chr8_2:7794574-7794593 | Msa1231560:intron | 40.0% | |
| AAATGGCGGCAAATATTGCA+GGG | - | chr8_2:7794575-7794594 | Msa1231560:intron | 40.0% | |
| !!! | AGTGTTTTGGTGCAACATCA+TGG | + | chr8_2:7794618-7794637 | None:intergenic | 40.0% |
| ! | CTGCAATTTAGGCAGTGTTT+TGG | + | chr8_2:7794631-7794650 | None:intergenic | 40.0% |
| ! | CTGATAAGTGTTGTCTATGG+CGG | + | chr8_2:7794683-7794702 | None:intergenic | 40.0% |
| ! | GTGCTGATAAGTGTTGTCTA+TGG | + | chr8_2:7794686-7794705 | None:intergenic | 40.0% |
| AATCTATCCACAGATCAGCA+CGG | + | chr8_2:7794712-7794731 | None:intergenic | 40.0% | |
| AAATTTCCACACTGTGGGTT+AGG | + | chr8_2:7794808-7794827 | None:intergenic | 40.0% | |
| AGTGATTGAGTAGAGAGAGA+AGG | - | chr8_2:7794898-7794917 | Msa1231560:CDS | 40.0% | |
| GTGATTGAGTAGAGAGAGAA+GGG | - | chr8_2:7794899-7794918 | Msa1231560:CDS | 40.0% | |
| TGATTGAGTAGAGAGAGAAG+GGG | - | chr8_2:7794900-7794919 | Msa1231560:CDS | 40.0% | |
| AAAAAGAAGGGGGAAATCAC+TGG | + | chr8_2:7795070-7795089 | None:intergenic | 40.0% | |
| GTCAGAATTGGCATTTGAAG+CGG | - | chr8_2:7795158-7795177 | Msa1231560:intron | 40.0% | |
| TACGTGAGAACTATAAGACG+TGG | - | chr8_2:7795288-7795307 | Msa1231560:intron | 40.0% | |
| GAGAACTATAAGACGTGGTA+TGG | - | chr8_2:7795293-7795312 | Msa1231560:intron | 40.0% | |
| AATGGTTGTGAAGAGGAGAT+GGG | + | chr8_2:7795430-7795449 | None:intergenic | 40.0% | |
| TAATGGTTGTGAAGAGGAGA+TGG | + | chr8_2:7795431-7795450 | None:intergenic | 40.0% | |
| TGCAACATCATGCCTGTAAT+TGG | + | chr8_2:7795510-7795529 | None:intergenic | 40.0% | |
| AACTACAGAGTTCTATGCAC+AGG | - | chr8_2:7795539-7795558 | Msa1231560:intron | 40.0% | |
| ACTACAGAGTTCTATGCACA+GGG | - | chr8_2:7795540-7795559 | Msa1231560:intron | 40.0% | |
| AAGCTCTCTTTCTTAGGCAT+AGG | - | chr8_2:7796446-7796465 | Msa1231560:intron | 40.0% | |
| TGATATGGCCCATTTGAAGA+AGG | + | chr8_2:7796497-7796516 | None:intergenic | 40.0% | |
| GTGATGTGGCACATGATTTA+AGG | - | chr8_2:7796923-7796942 | Msa1231560:CDS | 40.0% | |
| GAAGTTCGTGTACGATATCA+TGG | - | chr8_2:7796945-7796964 | Msa1231560:CDS | 40.0% | |
| CGTGTACGATATCATGGATT+CGG | - | chr8_2:7796951-7796970 | Msa1231560:CDS | 40.0% | |
| ! | ACGATATCATGGATTCGGTA+AGG | - | chr8_2:7796956-7796975 | Msa1231560:intron | 40.0% |
| TCGGTAAGGATGAAGATGAA+TGG | - | chr8_2:7796970-7796989 | Msa1231560:intron | 40.0% | |
| AAAGGCTAGAATCCCTTACA+TGG | + | chr8_2:7797088-7797107 | None:intergenic | 40.0% | |
| AACACGGCAACAATCATATG+TGG | + | chr8_2:7797148-7797167 | None:intergenic | 40.0% | |
| !! | CTACGTTTGGGTTGATATGT+TGG | + | chr8_2:7797319-7797338 | None:intergenic | 40.0% |
| CAGACTTGTCATGGTAAAAC+CGG | + | chr8_2:7797520-7797539 | None:intergenic | 40.0% | |
| ! | GTTTTACCATGACAAGTCTG+AGG | - | chr8_2:7797520-7797539 | Msa1231560:intron | 40.0% |
| CCAAAGACACATGAAACATC+AGG | + | chr8_2:7797651-7797670 | None:intergenic | 40.0% | |
| CCTGATGTTTCATGTGTCTT+TGG | - | chr8_2:7797648-7797667 | Msa1231560:intron | 40.0% | |
| ATGTTTCATGTGTCTTTGGC+AGG | - | chr8_2:7797652-7797671 | Msa1231560:intron | 40.0% | |
| AGTCATGTGTATCCGTTGTA+AGG | - | chr8_2:7797901-7797920 | Msa1231560:five_prime_UTR | 40.0% | |
| GTCATGTGTATCCGTTGTAA+GGG | - | chr8_2:7797902-7797921 | Msa1231560:five_prime_UTR | 40.0% | |
| CTCATAGAGATCCCTTACAA+CGG | + | chr8_2:7797916-7797935 | None:intergenic | 40.0% | |
| GAACTCAACTGCTCGGAAAT+CGG | - | chr8_2:7792061-7792080 | Msa1231560:three_prime_UTR | 45.0% | |
| !! | TGAAGTGAATCGTGCTGCTT+TGG | + | chr8_2:7792129-7792148 | None:intergenic | 45.0% |
| TCCTAAGCTCTCTTTAGACG+AGG | - | chr8_2:7792214-7792233 | Msa1231560:three_prime_UTR | 45.0% | |
| ACCTCGTCTAAAGAGAGCTT+AGG | + | chr8_2:7792218-7792237 | None:intergenic | 45.0% | |
| ATCGTGGGAACAGGTTGTTA+AGG | - | chr8_2:7792993-7793012 | Msa1231560:CDS | 45.0% | |
| CCTGAAACCCAAAACAACAG+CGG | + | chr8_2:7793086-7793105 | None:intergenic | 45.0% | |
| TGCCCGAAAGATCAACAACT+AGG | + | chr8_2:7793179-7793198 | None:intergenic | 45.0% | |
| CTAGGCATTCACTTGCTTTG+GGG | - | chr8_2:7793374-7793393 | Msa1231560:intron | 45.0% | |
| TTATAGGCACCACGGATACA+AGG | - | chr8_2:7793549-7793568 | Msa1231560:intron | 45.0% | |
| ! | GAAGTTGGTCAATCAAGGAC+TGG | + | chr8_2:7793745-7793764 | None:intergenic | 45.0% |
| CTCATGCAATTGAAAGGACC+GGG | + | chr8_2:7794133-7794152 | None:intergenic | 45.0% | |
| CCTCATGCAATTGAAAGGAC+CGG | + | chr8_2:7794134-7794153 | None:intergenic | 45.0% | |
| GGCTACCTCATGCAATTGAA+AGG | + | chr8_2:7794139-7794158 | None:intergenic | 45.0% | |
| TATTGTGTGTCGCAGTGGTT+AGG | + | chr8_2:7794160-7794179 | None:intergenic | 45.0% | |
| TTGTCTCAACAACCTGGACA+TGG | + | chr8_2:7794349-7794368 | None:intergenic | 45.0% | |
| CTCGTCGATATGGTAAATGG+CGG | - | chr8_2:7794561-7794580 | Msa1231560:intron | 45.0% | |
| ! | TTTGGTGCAACATCATGGCA+GGG | + | chr8_2:7794613-7794632 | None:intergenic | 45.0% |
| !! | TTTTGGTGCAACATCATGGC+AGG | + | chr8_2:7794614-7794633 | None:intergenic | 45.0% |
| AATGCTGATGTGGCAGAGTT+TGG | - | chr8_2:7794838-7794857 | Msa1231560:intron | 45.0% | |
| TGATGTGGCAGAGTTTGGTA+AGG | - | chr8_2:7794843-7794862 | Msa1231560:intron | 45.0% | |
| GATGTGGCAGAGTTTGGTAA+GGG | - | chr8_2:7794844-7794863 | Msa1231560:intron | 45.0% | |
| ! | TCTGTAGGAGCTTTGACTCT+GGG | - | chr8_2:7794978-7794997 | Msa1231560:intron | 45.0% |
| GGCTCTTAACACATAATGCC+AGG | - | chr8_2:7795117-7795136 | Msa1231560:intron | 45.0% | |
| AGATCTGCAGCTTGAATACC+TGG | + | chr8_2:7795138-7795157 | None:intergenic | 45.0% | |
| AGCTGCAGATCTGTCAGAAT+TGG | - | chr8_2:7795146-7795165 | Msa1231560:intron | 45.0% | |
| TTGTGAAGAGGAGATGGGTA+TGG | + | chr8_2:7795425-7795444 | None:intergenic | 45.0% | |
| CTACAGAGTTCTATGCACAG+GGG | - | chr8_2:7795541-7795560 | Msa1231560:intron | 45.0% | |
| CTCAAGCTCAAAACCATGCA+TGG | - | chr8_2:7796189-7796208 | Msa1231560:intron | 45.0% | |
| TTAGCACAAGCAATTGGGCA+AGG | + | chr8_2:7796405-7796424 | None:intergenic | 45.0% | |
| ! | GACCATGAAAGCGTGTGATA+TGG | + | chr8_2:7796512-7796531 | None:intergenic | 45.0% |
| TTTCCCTCAAATTCCTGGTC+TGG | + | chr8_2:7796534-7796553 | None:intergenic | 45.0% | |
| !! | TCGCTTTTCCCTCAAATTCC+TGG | + | chr8_2:7796539-7796558 | None:intergenic | 45.0% |
| !! | TGACACTCTGAAGCTTCCAA+CGG | + | chr8_2:7797032-7797051 | None:intergenic | 45.0% |
| ! | TTCAGAGTGTCACAAGGTGA+AGG | - | chr8_2:7797040-7797059 | Msa1231560:intron | 45.0% |
| CAACAATCATATGTGGCCAC+TGG | + | chr8_2:7797141-7797160 | None:intergenic | 45.0% | |
| ! | CGGTTGACTTCGCAAACATT+TGG | + | chr8_2:7797288-7797307 | None:intergenic | 45.0% |
| AGATCACCTCAGACTTGTCA+TGG | + | chr8_2:7797529-7797548 | None:intergenic | 45.0% | |
| TCAGGTAAAGGTAACATCCG+AGG | + | chr8_2:7797633-7797652 | None:intergenic | 45.0% | |
| TTTGGCAGGAAGAAGTTCGT+TGG | - | chr8_2:7797666-7797685 | Msa1231560:intron | 45.0% | |
| TTGGCAGGAAGAAGTTCGTT+GGG | - | chr8_2:7797667-7797686 | Msa1231560:intron | 45.0% | |
| ACCTCAGACTCTTCTTGTGT+TGG | + | chr8_2:7797710-7797729 | None:intergenic | 45.0% | |
| CGTTGTAAGGGATCTCTATG+AGG | - | chr8_2:7797914-7797933 | Msa1231560:five_prime_UTR | 45.0% | |
| !!! | AATAAAATAAAAAATCTTTT+TGG | + | chr8_2:7795387-7795406 | None:intergenic | 5.0% |
| GGCAACTGAACTCAACTGCT+CGG | - | chr8_2:7792054-7792073 | Msa1231560:three_prime_UTR | 50.0% | |
| GGCATGCAATCGCAGAATTG+CGG | + | chr8_2:7792108-7792127 | None:intergenic | 50.0% | |
| CGTAACACAAAGGCCCTGTT+TGG | + | chr8_2:7792889-7792908 | None:intergenic | 50.0% | |
| !!! | CCGCTGTTGTTTTGGGTTTC+AGG | - | chr8_2:7793083-7793102 | Msa1231560:CDS | 50.0% |
| !! | ACTTACTGGCCTTGTATCCG+TGG | + | chr8_2:7793561-7793580 | None:intergenic | 50.0% |
| ACTGGCGTTACAGAGGTCTA+AGG | + | chr8_2:7793727-7793746 | None:intergenic | 50.0% | |
| ! | ATCAAGGACTGGCGTTACAG+AGG | + | chr8_2:7793734-7793753 | None:intergenic | 50.0% |
| GGACCGGGTTCAATACGTAT+GGG | + | chr8_2:7794118-7794137 | None:intergenic | 50.0% | |
| AGGACCGGGTTCAATACGTA+TGG | + | chr8_2:7794119-7794138 | None:intergenic | 50.0% | |
| CCGGTCCTTTCAATTGCATG+AGG | - | chr8_2:7794131-7794150 | Msa1231560:intron | 50.0% | |
| AGACTTCATGAGCCATGTCC+AGG | - | chr8_2:7794334-7794353 | Msa1231560:intron | 50.0% | |
| GGCCTCGTCGATATGGTAAA+TGG | - | chr8_2:7794558-7794577 | Msa1231560:intron | 50.0% | |
| CGCCATTTACCATATCGACG+AGG | + | chr8_2:7794563-7794582 | None:intergenic | 50.0% | |
| TGCAACATCATGGCAGGGTA+TGG | + | chr8_2:7794608-7794627 | None:intergenic | 50.0% | |
| !! | GTGTTGTCTATGGCGGATGA+CGG | + | chr8_2:7794676-7794695 | None:intergenic | 50.0% |
| !! | CACACTGTGGGTTAGGAAGT+AGG | + | chr8_2:7794801-7794820 | None:intergenic | 50.0% |
| CTACTTCCTAACCCACAGTG+TGG | - | chr8_2:7794799-7794818 | Msa1231560:intron | 50.0% | |
| AGTCATGGGCAGAGAACGAA+CGG | - | chr8_2:7794950-7794969 | Msa1231560:intron | 50.0% | |
| GAACGAACGGTGTTCTCTGT+AGG | - | chr8_2:7794963-7794982 | Msa1231560:intron | 50.0% | |
| ! | CTCTGTAGGAGCTTTGACTC+TGG | - | chr8_2:7794977-7794996 | Msa1231560:intron | 50.0% |
| TGGAGTGAAGAGTGGTGACT+TGG | + | chr8_2:7795367-7795386 | None:intergenic | 50.0% | |
| TGAAGAGGAGATGGGTATGG+TGG | + | chr8_2:7795422-7795441 | None:intergenic | 50.0% | |
| !! | GAAGGCATTGCAGGCATGAA+AGG | + | chr8_2:7795651-7795670 | None:intergenic | 50.0% |
| ! | CTTTTTCTCGTGGCCATGCA+TGG | + | chr8_2:7796205-7796224 | None:intergenic | 50.0% |
| CATGCATGGCCACGAGAAAA+AGG | - | chr8_2:7796203-7796222 | Msa1231560:intron | 50.0% | |
| CTCATTGTTGGGCACTTCAG+CGG | - | chr8_2:7796332-7796351 | Msa1231560:intron | 50.0% | |
| TCATTGTTGGGCACTTCAGC+GGG | - | chr8_2:7796333-7796352 | Msa1231560:intron | 50.0% | |
| GGCCATATCACACGCTTTCA+TGG | - | chr8_2:7796507-7796526 | Msa1231560:intron | 50.0% | |
| TGGTCCAGACCAGGAATTTG+AGG | - | chr8_2:7796527-7796546 | Msa1231560:intron | 50.0% | |
| GGTCCAGACCAGGAATTTGA+GGG | - | chr8_2:7796528-7796547 | Msa1231560:intron | 50.0% | |
| !! | GACACTCTGAAGCTTCCAAC+GGG | + | chr8_2:7797031-7797050 | None:intergenic | 50.0% |
| ! | GGAAGCTTCAGAGTGTCACA+AGG | - | chr8_2:7797034-7797053 | Msa1231560:intron | 50.0% |
| GAGTGTCACAAGGTGAAGGA+AGG | - | chr8_2:7797044-7797063 | Msa1231560:intron | 50.0% | |
| GTAGCTGCATCTTCACTGTC+CGG | - | chr8_2:7797498-7797517 | Msa1231560:intron | 50.0% | |
| GTTGGGACAGTTTGTGCTGT+AGG | - | chr8_2:7797684-7797703 | Msa1231560:intron | 50.0% | |
| GCCAACACAAGAAGAGTCTG+AGG | - | chr8_2:7797706-7797725 | Msa1231560:intron | 50.0% | |
| TTCGCTATGGGGTTCATGGT+AGG | + | chr8_2:7797749-7797768 | None:intergenic | 50.0% | |
| CAAGTTCGCTATGGGGTTCA+TGG | + | chr8_2:7797753-7797772 | None:intergenic | 50.0% | |
| TGAACCCCATAGCGAACTTG+TGG | - | chr8_2:7797753-7797772 | Msa1231560:intron | 50.0% | |
| GAACCCCATAGCGAACTTGT+GGG | - | chr8_2:7797754-7797773 | Msa1231560:intron | 50.0% | |
| AACCCCATAGCGAACTTGTG+GGG | - | chr8_2:7797755-7797774 | Msa1231560:intron | 50.0% | |
| ATCCCCACAAGTTCGCTATG+GGG | + | chr8_2:7797760-7797779 | None:intergenic | 50.0% | |
| CATCCCCACAAGTTCGCTAT+GGG | + | chr8_2:7797761-7797780 | None:intergenic | 50.0% | |
| TCATCCCCACAAGTTCGCTA+TGG | + | chr8_2:7797762-7797781 | None:intergenic | 50.0% | |
| CTCAACTGCTCGGAAATCGG+CGG | - | chr8_2:7792064-7792083 | Msa1231560:three_prime_UTR | 55.0% | |
| ! | TTGGGTTTCAGGTGCAGCAG+TGG | - | chr8_2:7793094-7793113 | Msa1231560:CDS | 55.0% |
| ACAACTAGGTTCAGCCCCTC+AGG | + | chr8_2:7793165-7793184 | None:intergenic | 55.0% | |
| GGATTTGGGCCTCGTCGATA+TGG | - | chr8_2:7794551-7794570 | Msa1231560:intron | 55.0% | |
| !! | CTATGGCGGATGACGGTATG+TGG | + | chr8_2:7794669-7794688 | None:intergenic | 55.0% |
| CGGGAGGAATTGGAGTTGTG+CGG | - | chr8_2:7796352-7796371 | Msa1231560:intron | 55.0% | |
| GGGAGGAATTGGAGTTGTGC+GGG | - | chr8_2:7796353-7796372 | Msa1231560:intron | 55.0% | |
| ACGCTTTCATGGTCCAGACC+AGG | - | chr8_2:7796518-7796537 | Msa1231560:intron | 55.0% | |
| !! | CTCTGAAGCTTCCAACGGGA+TGG | + | chr8_2:7797027-7797046 | None:intergenic | 55.0% |
| CGCTATCATGTTCCCTCCTC+TGG | + | chr8_2:7797472-7797491 | None:intergenic | 55.0% | |
| AACTGCTCGGAAATCGGCGG+TGG | - | chr8_2:7792067-7792086 | Msa1231560:three_prime_UTR | 60.0% | |
| TCGGAAATCGGCGGTGGAGT+TGG | - | chr8_2:7792073-7792092 | Msa1231560:three_prime_UTR | 60.0% | |
| ! | GCACAGTCCGTGCTGATCTG+TGG | - | chr8_2:7794702-7794721 | Msa1231560:intron | 60.0% |
| TTGTTGGGCACTTCAGCGGG+AGG | - | chr8_2:7796336-7796355 | Msa1231560:intron | 60.0% | |
| GGCACTTCAGCGGGAGGAAT+TGG | - | chr8_2:7796342-7796361 | Msa1231560:intron | 60.0% | |
| GCGACAGAGATCCATCCCGT+TGG | - | chr8_2:7797013-7797032 | Msa1231560:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 7792013 | 7798062 | 7792013 | ID=Msa1231560;Name=Msa1231560 |
| chr8_2 | mRNA | 7792013 | 7798062 | 7792013 | ID=Msa1231560-mRNA-1;Parent=Msa1231560;Name=Msa1231560-mRNA-1;_AED=0.28;_eAED=0.28;_QI=169|0.83|1|1|0.83|0.85|7|281|226 |
| chr8_2 | exon | 7792013 | 7792401 | 7792013 | ID=Msa1231560-mRNA-1:exon:2966;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7792534 | 7792653 | 7792534 | ID=Msa1231560-mRNA-1:exon:2965;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7792987 | 7793130 | 7792987 | ID=Msa1231560-mRNA-1:exon:2964;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7794507 | 7794558 | 7794507 | ID=Msa1231560-mRNA-1:exon:2963;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7794873 | 7794936 | 7794873 | ID=Msa1231560-mRNA-1:exon:2962;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7796832 | 7796970 | 7796832 | ID=Msa1231560-mRNA-1:exon:2961;Parent=Msa1231560-mRNA-1 |
| chr8_2 | exon | 7797840 | 7798062 | 7797840 | ID=Msa1231560-mRNA-1:exon:2960;Parent=Msa1231560-mRNA-1 |
| chr8_2 | five_prime_UTR | 7797894 | 7798062 | 7797894 | ID=Msa1231560-mRNA-1:five_prime_utr;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7797840 | 7797893 | 7797840 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7796832 | 7796970 | 7796832 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7794873 | 7794936 | 7794873 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7794507 | 7794558 | 7794507 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7792987 | 7793130 | 7792987 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7792534 | 7792653 | 7792534 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | CDS | 7792294 | 7792401 | 7792294 | ID=Msa1231560-mRNA-1:cds;Parent=Msa1231560-mRNA-1 |
| chr8_2 | three_prime_UTR | 7792013 | 7792293 | 7792013 | ID=Msa1231560-mRNA-1:three_prime_utr;Parent=Msa1231560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
