AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1313330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313330 MtrunA17_Chr8g0341951 94.130 494 8 2 1 494 1 473 0.0 951
Msa1313330 MtrunA17_Chr8g0372411 52.700 463 192 6 38 495 40 480 4.81e-175 501
Msa1313330 MtrunA17_Chr3g0113321 38.745 462 264 7 34 494 26 469 1.32e-114 347
Msa1313330 MtrunA17_Chr5g0403931 34.400 500 292 9 2 491 5 478 2.15e-99 307
Msa1313330 MtrunA17_Chr6g0478161 32.091 483 309 7 1 482 15 479 5.36e-96 299
Msa1313330 MtrunA17_Chr8g0373441 37.831 415 238 8 8 414 10 412 8.68e-93 288
Msa1313330 MtrunA17_Chr7g0226771 32.371 485 294 9 3 483 6 460 7.59e-92 288
Msa1313330 MtrunA17_Chr6g0455461 34.649 456 259 11 33 481 29 452 1.40e-90 284
Msa1313330 MtrunA17_Chr3g0078411 34.430 456 260 11 33 481 29 452 4.69e-90 283
Msa1313330 MtrunA17_Chr7g0219961 34.286 455 259 11 33 480 29 450 1.54e-88 278
Msa1313330 MtrunA17_Chr5g0397971 30.802 474 285 9 5 467 2 443 1.60e-79 256
Msa1313330 MtrunA17_Chr4g0044851 32.110 436 263 8 36 467 36 442 6.05e-74 241
Msa1313330 MtrunA17_Chr8g0369791 30.584 497 299 14 1 488 1 460 2.39e-72 236
Msa1313330 MtrunA17_Chr1g0153371 30.608 477 283 12 1 466 1 440 1.49e-70 232
Msa1313330 MtrunA17_Chr5g0408181 30.087 462 287 10 13 470 9 438 2.36e-70 231
Msa1313330 MtrunA17_Chr5g0404881 47.137 227 113 3 12 236 13 234 6.43e-69 220
Msa1313330 MtrunA17_Chr4g0044841 30.155 451 268 8 28 467 29 443 9.96e-67 222
Msa1313330 MtrunA17_Chr5g0404861 56.497 177 61 1 319 495 1 161 4.00e-66 210
Msa1313330 MtrunA17_Chr3g0089361 30.926 443 271 9 32 467 35 449 1.03e-65 219
Msa1313330 MtrunA17_Chr5g0443731 29.754 447 283 7 28 467 22 444 1.09e-65 219
Msa1313330 MtrunA17_Chr2g0293421 30.425 447 279 7 28 466 37 459 3.60e-64 216
Msa1313330 MtrunA17_Chr8g0381571 29.243 489 294 11 1 466 1 460 4.85e-64 215
Msa1313330 MtrunA17_Chr8g0381541 29.243 489 294 11 1 466 1 460 6.55e-64 215
Msa1313330 MtrunA17_Chr2g0293411 29.375 480 301 9 1 465 1 457 1.71e-63 214
Msa1313330 MtrunA17_Chr5g0443401 29.060 468 293 12 32 486 33 474 1.00e-61 209
Msa1313330 MtrunA17_Chr3g0089351 30.653 398 239 8 76 467 1 367 2.80e-61 206
Msa1313330 MtrunA17_Chr8g0388921 28.085 470 299 11 6 467 11 449 1.26e-60 206
Msa1313330 MtrunA17_Chr1g0164371 30.093 432 276 6 36 467 43 448 3.37e-59 202
Msa1313330 MtrunA17_Chr3g0141801 29.810 473 287 11 6 467 17 455 5.35e-58 199
Msa1313330 MtrunA17_Chr3g0107511 26.025 488 333 6 12 491 8 475 3.73e-54 189
Msa1313330 MtrunA17_Chr8g0380471 26.160 474 317 11 1 467 1 448 4.45e-54 189
Msa1313330 MtrunA17_Chr3g0107501 26.652 469 317 7 30 491 27 475 1.29e-52 185
Msa1313330 MtrunA17_Chr5g0400421 28.636 440 283 8 36 466 44 461 3.30e-50 179
Msa1313330 MtrunA17_Chr8g0372711 28.294 463 287 11 21 471 31 460 2.89e-49 176
Msa1313330 MtrunA17_Chr8g0339861 28.795 448 279 12 32 466 37 457 6.26e-49 175
Msa1313330 MtrunA17_Chr5g0400411 28.018 439 286 9 36 466 44 460 3.14e-48 173
Msa1313330 MtrunA17_Chr5g0437001 45.614 171 63 3 340 495 1 156 1.40e-42 149
Msa1313330 MtrunA17_Chr8g0380931 22.958 453 310 11 27 467 52 477 4.90e-37 142
Msa1313330 MtrunA17_Chr5g0436981 36.774 155 96 1 32 186 23 175 3.77e-36 132
Msa1313330 MtrunA17_Chr8g0381551 25.731 342 220 10 1 319 1 331 1.22e-28 116
Msa1313330 MtrunA17_Chr8g0381561 41.860 129 57 1 338 466 1 111 3.03e-28 108
Msa1313330 MtrunA17_Chr1g0161671 26.582 316 216 8 12 318 7 315 7.74e-26 107
Msa1313330 MtrunA17_Chr3g0089291 26.556 241 167 5 76 313 1 234 7.64e-25 102
Msa1313330 MtrunA17_Chr5g0395321 23.819 487 320 14 4 470 11 466 7.81e-24 104
Msa1313330 MtrunA17_Chr4g0000151 37.500 144 69 3 337 478 3 127 2.46e-23 95.9
Msa1313330 MtrunA17_Chr6g0463551 31.443 194 116 6 190 372 2 189 1.33e-22 95.5
Msa1313330 MtrunA17_Chr5g0395381 31.532 222 128 5 255 472 242 443 7.31e-22 98.2
Msa1313330 MtrunA17_Chr5g0395331 29.832 238 140 6 241 472 259 475 9.16e-21 95.1
Msa1313330 MtrunA17_Chr4g0000171 24.926 337 227 12 1 320 1 328 1.61e-20 92.8
Msa1313330 MtrunA17_Chr4g0013471 25.298 336 229 14 1 321 1 329 4.71e-20 92.0
Msa1313330 MtrunA17_Chr4g0000161 25.526 333 222 13 1 316 1 324 3.34e-19 89.0
Msa1313330 MtrunA17_Chr3g0089381 26.364 220 152 4 180 394 2 216 3.73e-19 86.3
Msa1313330 MtrunA17_Chr1g0205361 29.583 240 133 8 241 470 253 466 4.71e-19 90.1
Msa1313330 MtrunA17_Chr1g0160851 24.048 499 302 15 13 470 4 466 1.46e-18 88.6
Msa1313330 MtrunA17_Chr1g0160861 27.734 256 151 8 227 470 74 307 1.69e-18 86.7
Msa1313330 MtrunA17_Chr1g0176831 29.719 249 148 7 250 493 290 516 2.15e-18 87.8
Msa1313330 MtrunA17_Chr2g0314731 29.707 239 141 7 260 493 270 486 3.42e-18 87.0
Msa1313330 MtrunA17_Chr1g0174481 26.357 258 166 5 240 489 252 493 6.48e-18 86.7
Msa1313330 MtrunA17_Chr6g0463541 34.400 125 61 3 368 490 2 107 6.52e-18 79.3
Msa1313330 MtrunA17_Chr1g0174441 27.386 241 149 7 259 489 296 520 1.65e-17 85.5
Msa1313330 MtrunA17_Chr1g0174451 26.506 249 155 7 238 476 253 483 1.76e-17 85.1
Msa1313330 MtrunA17_Chr1g0207841 28.704 216 128 5 259 467 284 480 1.98e-17 85.1
Msa1313330 MtrunA17_Chr4g0046321 25.359 418 273 15 73 465 67 470 2.03e-17 85.1
Msa1313330 MtrunA17_Chr4g0046331 28.033 239 152 6 236 465 245 472 3.87e-17 84.0
Msa1313330 MtrunA17_Chr7g0224551 24.350 423 271 15 73 465 63 466 5.68e-17 83.6
Msa1313330 MtrunA17_Chr2g0314781 32.044 181 97 5 321 493 11 173 7.43e-17 78.6
Msa1313330 MtrunA17_Chr5g0405001 21.837 490 323 14 6 467 22 479 7.74e-17 83.2
Msa1313330 MtrunA17_Chr4g0030701 28.972 214 133 6 259 467 279 478 7.75e-17 83.2
Msa1313330 MtrunA17_Chr4g0030711 28.505 214 134 5 259 467 282 481 9.12e-17 83.2
Msa1313330 MtrunA17_Chr7g0265611 28.916 249 145 7 256 494 282 508 1.04e-16 82.8
Msa1313330 MtrunA17_Chr1g0164211 30.233 215 121 7 260 467 268 460 1.78e-16 82.0
Msa1313330 MtrunA17_Chr4g0046351 27.197 239 152 7 236 465 245 470 1.88e-16 82.0
Msa1313330 MtrunA17_Chr3g0101631 22.626 495 322 15 1 467 1 462 2.23e-16 81.6
Msa1313330 MtrunA17_Chr8g0362701 26.562 256 154 9 247 489 264 498 2.44e-16 81.6
Msa1313330 MtrunA17_Chr8g0356001 23.340 467 299 15 35 471 39 476 2.74e-16 81.3
Msa1313330 MtrunA17_Chr3g0101621 24.074 486 312 15 6 467 5 457 3.00e-16 81.3
Msa1313330 MtrunA17_Chr1g0162811 23.108 489 315 16 6 467 12 466 3.56e-16 80.9
Msa1313330 MtrunA17_Chr1g0205371 23.506 502 321 16 1 472 1 469 4.05e-16 80.9
Msa1313330 MtrunA17_Chr2g0314721 28.571 238 143 8 260 492 281 496 4.12e-16 80.9
Msa1313330 MtrunA17_Chr7g0224561 23.877 423 273 15 73 465 63 466 6.12e-16 80.5
Msa1313330 MtrunA17_Chr5g0431511 28.054 221 131 6 259 471 272 472 6.55e-16 80.1
Msa1313330 MtrunA17_Chr1g0161651 24.756 307 177 8 13 271 17 317 6.77e-16 79.0
Msa1313330 MtrunA17_Chr1g0174471 26.531 245 144 7 259 489 292 514 6.83e-16 80.1
Msa1313330 MtrunA17_Chr4g0057001 21.457 494 329 14 29 490 42 508 6.88e-16 80.1
Msa1313330 MtrunA17_Chr8g0362481 25.984 254 158 8 247 489 195 429 8.68e-16 79.7
Msa1313330 MtrunA17_Chr3g0101601 23.251 486 320 14 7 467 6 463 9.92e-16 79.7
Msa1313330 MtrunA17_Chr7g0254641 22.689 476 299 15 33 467 33 480 1.16e-15 79.3
Msa1313330 MtrunA17_Chr1g0174431 29.032 186 121 4 285 470 1 175 2.16e-15 75.1
Msa1313330 MtrunA17_Chr8g0364651 23.387 496 321 17 1 467 1 466 4.66e-15 77.4
Msa1313330 MtrunA17_Chr4g0058201 24.065 428 264 13 73 467 59 458 5.50e-15 77.4
Msa1313330 MtrunA17_Chr4g0035921 26.471 204 129 3 266 467 295 479 7.43e-15 77.0
Msa1313330 MtrunA17_Chr5g0436991 30.769 143 94 4 175 316 18 156 9.72e-15 72.0
Msa1313330 MtrunA17_Chr5g0404871 40.000 110 47 3 233 324 7 115 1.04e-14 70.9
Msa1313330 MtrunA17_Chr5g0431501 28.182 220 130 6 260 471 273 472 1.07e-14 76.6
Msa1313330 MtrunA17_Chr5g0431461 28.182 220 130 6 260 471 273 472 1.07e-14 76.6
Msa1313330 MtrunA17_Chr8g0351801 27.350 234 133 5 256 472 276 489 3.19e-14 75.1
Msa1313330 MtrunA17_Chr8g0355961 22.899 476 304 15 28 471 32 476 4.16e-14 74.7
Msa1313330 MtrunA17_Chr3g0101611 22.555 501 306 16 9 467 9 469 8.08e-14 73.6
Msa1313330 MtrunA17_Chr1g0174461 28.500 200 116 6 259 450 276 456 9.80e-14 73.6
Msa1313330 MtrunA17_Chr1g0197871 28.311 219 130 7 260 472 269 466 1.27e-13 73.2
Msa1313330 MtrunA17_Chr4g0039901 22.360 483 281 17 36 471 34 469 1.28e-13 73.2
Msa1313330 MtrunA17_Chr8g0373431 41.176 68 39 1 429 495 1 68 1.48e-13 65.9
Msa1313330 MtrunA17_Chr4g0011961 25.455 220 140 4 261 474 267 468 1.53e-13 72.8
Msa1313330 MtrunA17_Chr5g0445451 26.977 215 132 6 260 467 270 466 2.84e-13 72.0
Msa1313330 MtrunA17_Chr4g0011981 26.636 214 133 5 260 467 267 462 3.29e-13 71.6
Msa1313330 MtrunA17_Chr4g0076161 26.459 257 167 7 217 467 229 469 5.10e-13 71.2
Msa1313330 MtrunA17_Chr7g0258221 25.893 224 142 6 272 489 293 498 6.76e-13 70.9
Msa1313330 MtrunA17_Chr7g0246151 23.308 266 167 7 241 495 255 494 8.35e-13 70.5
Msa1313330 MtrunA17_Chr8g0372251 26.906 223 130 5 240 447 247 451 1.10e-12 70.1
Msa1313330 MtrunA17_Chr4g0058231 26.941 219 126 6 260 467 272 467 1.10e-12 70.1
Msa1313330 MtrunA17_Chr4g0058211 26.943 193 122 4 276 467 10 184 1.13e-12 67.4
Msa1313330 MtrunA17_Chr7g0246221 21.822 527 341 19 4 495 5 495 1.31e-12 70.1
Msa1313330 MtrunA17_Chr8g0361471 23.887 247 163 5 228 467 239 467 1.55e-12 69.7
Msa1313330 MtrunA17_Chr3g0101571 20.325 492 340 13 1 467 1 465 1.66e-12 69.7
Msa1313330 MtrunA17_Chr4g0053621 23.779 307 175 9 174 467 203 463 1.84e-12 69.3
Msa1313330 MtrunA17_Chr1g0200951 25.439 228 146 8 260 480 300 510 1.85e-12 69.3
Msa1313330 MtrunA17_Chr3g0101581 21.399 486 323 15 36 492 36 491 1.86e-12 69.3
Msa1313330 MtrunA17_Chr1g0197851 27.397 219 132 7 260 472 269 466 1.99e-12 69.3
Msa1313330 MtrunA17_Chr7g0218611 26.201 229 140 6 251 471 263 470 2.83e-12 68.9
Msa1313330 MtrunA17_Chr1g0161641 32.979 94 45 2 373 466 13 88 2.88e-12 62.8
Msa1313330 MtrunA17_Chr4g0011921 21.807 509 309 16 1 467 1 462 2.99e-12 68.9
Msa1313330 MtrunA17_Chr8g0346261 25.822 213 138 6 259 467 317 513 3.58e-12 68.6
Msa1313330 MtrunA17_Chr1g0197881 27.397 219 132 7 260 472 268 465 5.44e-12 67.8
Msa1313330 MtrunA17_Chr6g0451811 28.042 189 103 7 282 459 2 168 5.45e-12 65.1
Msa1313330 MtrunA17_Chr1g0197891 27.397 219 132 7 260 472 269 466 6.27e-12 67.8
Msa1313330 MtrunA17_Chr4g0011851 24.468 188 119 5 283 467 14 181 8.17e-12 64.7
Msa1313330 MtrunA17_Chr1g0200961 26.070 257 163 7 219 467 226 463 9.35e-12 67.4
Msa1313330 MtrunA17_Chr1g0156081 26.389 216 131 6 260 467 306 501 1.43e-11 66.6
Msa1313330 MtrunA17_Chr4g0020041 25.532 235 144 8 243 467 255 468 1.53e-11 66.6
Msa1313330 MtrunA17_Chr1g0156061 24.766 214 137 4 260 467 238 433 1.84e-11 66.2
Msa1313330 MtrunA17_Chr3g0084921 23.237 241 154 4 243 472 262 482 2.42e-11 65.9
Msa1313330 MtrunA17_Chr6g0451781 25.000 348 201 16 152 459 193 520 2.43e-11 66.2
Msa1313330 MtrunA17_Chr4g0058261 23.214 224 153 4 272 494 319 524 2.47e-11 65.9
Msa1313330 MtrunA17_Chr7g0246121 25.806 248 151 9 256 494 268 491 3.09e-11 65.5
Msa1313330 MtrunA17_Chr7g0246181 23.810 273 168 8 236 494 247 493 3.32e-11 65.5
Msa1313330 MtrunA17_Chr8g0339331 27.111 225 138 7 260 476 285 491 3.37e-11 65.5
Msa1313330 MtrunA17_Chr4g0046631 23.307 502 316 21 1 459 7 482 3.84e-11 65.5
Msa1313330 MtrunA17_Chr6g0463561 30.769 143 88 4 1 139 6 141 4.75e-11 62.0
Msa1313330 MtrunA17_Chr5g0445531 23.093 472 280 18 36 467 37 465 5.04e-11 65.1
Msa1313330 MtrunA17_Chr6g0457421 21.495 428 278 14 71 472 88 483 7.20e-11 64.3
Msa1313330 MtrunA17_Chr5g0406651 23.767 223 146 5 251 467 259 463 9.52e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313330 AT3G13730.1 64.363 463 139 4 36 493 50 491 0.0 619
Msa1313330 AT3G13730.2 64.450 436 129 4 36 466 50 464 0.0 578
Msa1313330 AT4G36380.1 54.212 463 189 6 37 494 69 513 1.65e-180 516
Msa1313330 AT4G36380.2 50.549 364 164 5 37 395 69 421 4.94e-123 366
Msa1313330 AT5G05690.1 42.048 459 241 7 37 492 31 467 3.19e-121 363
Msa1313330 AT3G50660.1 35.451 488 280 7 32 493 34 512 6.72e-103 318
Msa1313330 AT1G73340.1 33.333 486 298 9 13 495 20 482 6.00e-98 304
Msa1313330 AT5G05690.2 40.970 371 214 4 37 407 31 396 3.43e-95 294
Msa1313330 AT5G38970.1 34.658 453 259 9 34 480 31 452 1.44e-88 279
Msa1313330 AT5G05690.3 40.541 370 195 7 126 492 1 348 3.86e-87 272
Msa1313330 AT3G30180.1 33.124 477 282 12 7 480 10 452 1.67e-83 266
Msa1313330 AT3G50660.2 34.663 401 234 5 32 407 34 431 1.84e-83 265
Msa1313330 AT3G19270.2 31.702 470 286 7 1 467 1 438 5.66e-79 254
Msa1313330 AT4G19230.1 31.325 498 299 14 1 492 1 461 7.04e-79 254
Msa1313330 AT1G12740.1 30.065 459 290 6 12 467 13 443 2.49e-78 253
Msa1313330 AT3G19270.1 31.489 470 287 7 1 467 1 438 2.69e-78 252
Msa1313330 AT4G19230.2 31.847 471 280 13 1 467 1 434 3.64e-77 250
Msa1313330 AT5G38970.3 34.127 378 236 5 34 409 31 397 1.43e-76 246
Msa1313330 AT1G12740.2 29.677 465 290 7 12 467 13 449 6.63e-76 246
Msa1313330 AT1G12740.4 29.677 465 290 7 12 467 13 449 6.85e-76 246
Msa1313330 AT5G45340.1 31.250 496 289 13 6 492 9 461 6.10e-75 244
Msa1313330 AT2G29090.2 30.670 463 290 7 32 490 44 479 5.56e-74 242
Msa1313330 AT2G29090.1 30.670 463 290 7 32 490 44 479 5.56e-74 242
Msa1313330 AT5G45340.2 31.624 468 270 12 6 466 9 433 6.29e-73 238
Msa1313330 AT5G14400.2 31.333 450 263 9 42 486 1 409 1.07e-71 234
Msa1313330 AT5G38970.2 33.586 396 231 8 91 480 2 371 4.81e-71 231
Msa1313330 AT5G38970.4 33.586 396 231 8 91 480 2 371 4.81e-71 231
Msa1313330 AT5G14400.3 31.163 430 251 8 42 467 1 389 1.71e-68 224
Msa1313330 AT4G15300.2 29.053 475 294 12 7 475 14 451 9.14e-68 225
Msa1313330 AT4G15300.3 29.053 475 294 12 7 475 4 441 1.02e-67 225
Msa1313330 AT3G44970.1 31.799 478 279 13 31 492 29 475 8.54e-67 223
Msa1313330 AT4G15300.1 28.138 494 296 13 7 475 4 463 2.02e-64 217
Msa1313330 AT5G36110.1 29.892 465 292 11 36 490 33 473 1.96e-63 214
Msa1313330 AT1G05160.2 29.759 457 287 8 18 466 31 461 6.87e-63 213
Msa1313330 AT1G05160.1 29.759 457 287 8 18 466 31 461 6.87e-63 213
Msa1313330 AT4G15396.1 28.721 477 298 14 5 473 8 450 1.75e-61 209
Msa1313330 AT4G15393.2 27.848 474 304 12 5 473 8 448 1.27e-60 206
Msa1313330 AT5G48000.2 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.4 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.7 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.6 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.5 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.3 29.122 467 302 9 31 490 29 473 1.90e-60 206
Msa1313330 AT5G48000.1 29.122 467 302 9 31 490 70 514 6.52e-60 206
Msa1313330 AT2G32440.2 30.493 446 273 9 32 466 39 458 8.27e-60 204
Msa1313330 AT2G32440.1 30.493 446 273 9 32 466 39 458 8.27e-60 204
Msa1313330 AT4G15396.3 28.817 465 290 13 5 461 8 439 1.02e-59 203
Msa1313330 AT1G65670.1 27.803 446 294 9 31 475 29 447 4.63e-59 202
Msa1313330 AT1G55940.2 27.389 471 311 11 31 490 39 489 6.35e-58 200
Msa1313330 AT1G55940.1 28.315 445 289 10 31 465 39 463 7.63e-58 199
Msa1313330 AT2G29090.3 28.889 405 261 6 90 490 3 384 3.73e-56 192
Msa1313330 AT1G12740.3 28.818 347 239 4 31 374 25 366 3.34e-55 189
Msa1313330 AT1G19630.1 26.069 491 329 10 12 492 8 474 1.61e-54 190
Msa1313330 AT1G78490.1 29.605 456 279 11 31 473 29 455 1.97e-53 187
Msa1313330 AT1G19630.3 25.486 463 314 8 12 467 8 446 6.99e-52 182
Msa1313330 AT4G15396.2 27.463 477 283 15 5 473 8 429 1.97e-51 181
Msa1313330 AT5G14400.1 29.798 396 230 9 97 486 2 355 2.25e-51 179
Msa1313330 AT3G30290.1 28.571 406 258 10 75 475 3 381 3.74e-51 179
Msa1313330 AT5G14400.4 31.395 344 209 6 42 372 1 330 4.08e-51 177
Msa1313330 AT4G15396.4 28.398 412 269 11 5 408 8 401 6.95e-51 179
Msa1313330 AT2G42850.1 27.071 495 317 12 4 482 10 476 8.18e-51 180
Msa1313330 AT4G15393.1 27.451 408 274 9 5 407 8 398 7.19e-50 176
Msa1313330 AT4G15310.1 26.626 492 306 13 1 475 1 454 4.17e-49 176
Msa1313330 AT1G19630.2 25.495 404 289 7 12 408 8 406 1.13e-44 162
Msa1313330 AT5G36110.2 29.345 351 239 6 36 381 33 379 1.65e-44 161
Msa1313330 AT1G78490.2 28.941 387 257 8 31 408 29 406 1.01e-43 159
Msa1313330 AT4G15393.3 25.000 408 251 9 5 407 8 365 1.53e-38 144
Msa1313330 AT2G29090.4 28.966 290 196 5 32 319 44 325 3.17e-37 140
Msa1313330 AT2G42850.2 27.062 388 264 9 4 381 10 388 7.37e-35 135
Msa1313330 AT5G36140.1 29.801 302 199 8 17 314 17 309 2.94e-33 129
Msa1313330 AT3G44970.2 28.446 341 214 10 31 356 29 354 4.95e-30 121
Msa1313330 AT5G36130.1 29.605 152 86 3 342 490 3 136 6.32e-19 83.6
Msa1313330 AT2G45550.1 30.556 216 122 7 259 467 279 473 1.41e-17 85.9
Msa1313330 AT2G45570.1 24.571 350 212 11 144 467 151 474 9.32e-17 83.2
Msa1313330 AT5G67310.1 23.142 471 312 15 29 476 34 477 1.43e-16 82.8
Msa1313330 AT5G04330.1 22.222 468 296 15 38 467 33 470 3.08e-16 81.6
Msa1313330 AT4G13770.1 22.996 474 299 16 30 467 22 465 3.80e-16 81.3
Msa1313330 AT1G50520.1 26.236 263 165 8 222 474 244 487 9.79e-16 80.1
Msa1313330 AT4G37430.1 27.660 282 169 8 197 467 204 461 1.10e-15 80.1
Msa1313330 AT1G33730.1 24.928 345 216 11 144 467 15 337 1.33e-15 79.0
Msa1313330 AT1G33730.2 24.928 345 216 11 144 467 15 337 1.33e-15 79.0
Msa1313330 AT1G01190.1 22.917 480 303 17 19 467 56 499 2.63e-15 79.0
Msa1313330 AT1G01190.2 22.917 480 303 17 19 467 61 504 3.04e-15 78.6
Msa1313330 AT2G45580.2 25.592 211 136 5 260 467 128 320 4.38e-15 77.0
Msa1313330 AT2G45580.1 25.592 211 136 5 260 467 282 474 6.42e-15 77.8
Msa1313330 AT4G37400.1 25.108 231 146 5 265 488 272 482 9.65e-15 77.0
Msa1313330 AT2G45560.1 28.512 242 144 9 236 467 251 473 1.06e-14 77.0
Msa1313330 AT2G14100.1 21.136 440 304 11 60 474 62 483 1.13e-14 77.0
Msa1313330 AT3G61880.1 27.600 250 155 9 230 472 272 502 6.18e-14 74.7
Msa1313330 AT3G61880.2 27.984 243 149 9 237 472 279 502 8.85e-14 74.3
Msa1313330 AT1G50560.1 24.415 299 188 9 187 474 217 488 1.05e-13 73.9
Msa1313330 AT1G33720.4 27.273 220 124 7 259 467 147 341 1.30e-13 72.8
Msa1313330 AT1G33720.3 27.273 220 124 7 259 467 147 341 1.30e-13 72.8
Msa1313330 AT1G33720.5 27.273 220 124 7 259 467 147 341 1.30e-13 72.8
Msa1313330 AT4G15360.1 24.583 240 149 5 243 474 266 481 1.51e-13 73.2
Msa1313330 AT3G26150.1 24.797 246 154 6 237 471 246 471 1.85e-13 73.2
Msa1313330 AT3G20940.1 21.245 466 317 12 37 474 42 485 2.29e-13 72.8
Msa1313330 AT1G33720.1 27.273 220 124 7 259 467 279 473 2.76e-13 72.4
Msa1313330 AT1G74540.1 22.458 236 160 4 235 467 239 454 2.84e-13 72.4
Msa1313330 AT3G28740.1 27.228 202 119 4 274 472 294 470 3.49e-13 72.0
Msa1313330 AT5G25120.1 21.298 493 325 18 3 467 2 459 5.96e-13 71.2
Msa1313330 AT1G13080.2 24.242 231 151 4 247 473 145 355 6.47e-13 70.9
Msa1313330 AT3G26180.2 23.529 255 164 5 224 467 99 333 6.52e-13 70.5
Msa1313330 AT3G26330.1 25.000 236 143 6 252 475 258 471 7.56e-13 71.2
Msa1313330 AT1G74550.1 25.000 204 122 5 271 467 269 448 7.59e-13 70.9
Msa1313330 AT1G13080.1 24.242 231 151 4 247 473 263 473 9.07e-13 70.9
Msa1313330 AT4G37410.1 26.502 283 171 9 197 467 201 458 1.23e-12 70.5
Msa1313330 AT3G26230.1 27.027 222 137 5 260 472 266 471 1.65e-12 70.1
Msa1313330 AT5G25130.1 27.094 203 125 4 272 471 281 463 1.80e-12 69.7
Msa1313330 AT4G37370.1 24.775 222 135 5 273 488 284 479 1.86e-12 69.7
Msa1313330 AT3G26180.1 23.554 242 154 5 237 467 246 467 2.01e-12 69.7
Msa1313330 AT3G26170.1 23.140 242 155 5 237 467 246 467 2.71e-12 69.3
Msa1313330 AT4G37320.1 23.860 285 178 9 194 467 201 457 3.10e-12 69.3
Msa1313330 AT3G26160.1 25.333 225 137 6 237 450 246 450 3.26e-12 68.9
Msa1313330 AT1G33720.2 27.225 191 108 5 284 467 200 366 5.39e-12 68.2
Msa1313330 AT3G26280.2 25.822 213 141 3 260 471 294 490 6.27e-12 68.2
Msa1313330 AT5G42580.1 24.771 218 138 5 259 467 262 462 6.79e-12 68.2
Msa1313330 AT3G26280.1 25.822 213 141 3 260 471 277 473 6.86e-12 68.2
Msa1313330 AT5G57220.1 25.446 224 134 6 268 484 275 472 7.35e-12 67.8
Msa1313330 AT2G30770.1 25.207 242 147 6 238 470 249 465 1.06e-11 67.4
Msa1313330 AT4G37330.1 27.273 198 114 4 274 467 283 454 1.31e-11 67.0
Msa1313330 AT2G30750.1 26.950 282 175 10 202 470 202 465 1.34e-11 67.0
Msa1313330 AT3G26310.1 25.652 230 141 6 252 471 257 466 1.71e-11 67.0
Msa1313330 AT1G64940.1 21.713 502 326 14 5 467 4 477 2.13e-11 66.6
Msa1313330 AT3G20950.1 20.706 425 286 13 73 467 78 481 2.24e-11 66.6
Msa1313330 AT5G06905.1 22.308 390 261 10 103 479 132 492 3.24e-11 65.9
Msa1313330 AT4G37340.1 24.561 228 135 6 249 467 258 457 3.47e-11 65.9
Msa1313330 AT1G64930.1 23.394 218 152 4 261 477 284 487 6.66e-11 65.1

Find 106 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAGTCTCAACAGTTAA+AGG 0.116557 8_4:-11225313 Msa1313330:CDS
TTAAAAGATGTTGAAATAAA+AGG 0.209663 8_4:-11223117 Msa1313330:CDS
AGAACTGGCTTCATACTTTA+TGG 0.213426 8_4:+11221874 None:intergenic
CTCCATGGATTGAATTGATA+TGG 0.216450 8_4:+11223018 None:intergenic
GGAAGCTGATTTCTTTGTTT+TGG 0.231103 8_4:+11225900 None:intergenic
CATTAACTGCATCAATGATT+TGG 0.246139 8_4:+11225404 None:intergenic
CAAATCATTGATGCAGTTAA+TGG 0.249208 8_4:-11225403 Msa1313330:CDS
AGAATGGGAAATATTATAAA+TGG 0.257989 8_4:-11223156 Msa1313330:CDS
GTGTTCAAGTCACACATATT+TGG 0.262281 8_4:-11225510 Msa1313330:CDS
AGTTACAATTTCACTCCTTT+TGG 0.263418 8_4:-11222675 Msa1313330:CDS
CCCTAGCATAGCAGGTAAAA+TGG 0.275008 8_4:+11221627 None:intergenic
TTGGTTCCTGGTAGGTTTAT+TGG 0.281130 8_4:+11224348 None:intergenic
TACAAGAATCAATGGCAAAT+TGG 0.299562 8_4:-11225260 Msa1313330:CDS
TTTGAAGGACCCCGTGAATT+AGG 0.301204 8_4:-11221676 Msa1313330:three_prime_UTR
TCTATGGTTTCGCCAATAAA+AGG 0.301450 8_4:+11225858 None:intergenic
ATCAAAGTGCACAAGAAAAT+TGG 0.311890 8_4:+11225960 None:intergenic
CAAACTCTATCAATCTTTAC+AGG 0.316083 8_4:-11224328 Msa1313330:CDS
GGTTAAGGCATTGATTAGTT+TGG 0.319612 8_4:-11224439 Msa1313330:CDS
CACACTTTCTATGCTAGCTT+TGG 0.329630 8_4:+11226023 None:intergenic
AGAAGAATACATGGACTTAT+TGG 0.330766 8_4:-11225342 Msa1313330:CDS
GTTTCATCTTGTATGTATAT+AGG 0.334907 8_4:+11225225 None:intergenic
CGCTTGGTCATGAAGCTCTC+AGG 0.340723 8_4:+11225807 None:intergenic
CCAGATTGCCTTTCATGTAT+TGG 0.344235 8_4:-11224460 Msa1313330:intron
CTGTAAAGATTGATAGAGTT+TGG 0.351134 8_4:+11224329 None:intergenic
GTCCAAGCTAAAAGAAATAA+AGG 0.355190 8_4:-11224185 Msa1313330:CDS
ATCTGCATCTGTTGAAACTA+TGG 0.355994 8_4:+11225479 None:intergenic
ATTAACTGCATCAATGATTT+GGG 0.357663 8_4:+11225405 None:intergenic
TGCCTTTCATGTATTGGTTA+AGG 0.360416 8_4:-11224454 Msa1313330:CDS
ATTATTGATATGATGATTCC+TGG 0.361769 8_4:-11224077 Msa1313330:CDS
GGTTTATTGGCAAAGACATT+AGG 0.365137 8_4:+11224361 None:intergenic
ATCACCTTGTTACTCAATTC+AGG 0.370018 8_4:-11222590 Msa1313330:intron
CAGCTTCCACTAGGCACTCT+TGG 0.371339 8_4:-11225885 Msa1313330:CDS
TGCATGCAGTTAGCCACGTT+TGG 0.372924 8_4:-11222908 Msa1313330:intron
AGCACAAGAAACAAAATCTA+TGG 0.379663 8_4:+11225842 None:intergenic
TCCACTCTCCTTACTAAGAT+AGG 0.390448 8_4:+11221904 None:intergenic
AGAAACTCAAAGATCAGCTT+GGG 0.397691 8_4:-11223330 Msa1313330:CDS
TTTGGAACCAGGTGAAGAAA+TGG 0.404338 8_4:-11224421 Msa1313330:CDS
GTAGCTAGAGTCATAAGAAC+TGG 0.424472 8_4:+11224041 None:intergenic
AATCACTGAAACTTTGAGAA+TGG 0.438534 8_4:-11223172 Msa1313330:CDS
CTGCTATGCTAGGGAAGAAA+AGG 0.439549 8_4:-11221618 Msa1313330:three_prime_UTR
GATTGATAGAGTTTGGTTCC+TGG 0.441738 8_4:+11224336 None:intergenic
AACTTACATGGCGCATCGCT+TGG 0.445087 8_4:+11225791 None:intergenic
AGCACATCCACTACATCTCT+TGG 0.448392 8_4:+11224149 None:intergenic
AAATCATTGATGCAGTTAAT+GGG 0.450113 8_4:-11225402 Msa1313330:CDS
TCTTGCTTTACAACAATTGA+CGG 0.452785 8_4:-11223997 Msa1313330:intron
TGGTCTTGACTTGGCAAGGT+TGG 0.454804 8_4:-11222631 Msa1313330:CDS
ATCACTGAAACTTTGAGAAT+GGG 0.459694 8_4:-11223171 Msa1313330:CDS
CATCTTGTATGTATATAGGT+TGG 0.463350 8_4:+11225229 None:intergenic
TAAAAGATGTTGAAATAAAA+GGG 0.464767 8_4:-11223116 Msa1313330:CDS
AAAAGGATAAATGGAGGGCC+AGG 0.474075 8_4:-11221801 Msa1313330:three_prime_UTR
GAAGTATGTACAAGAATCAA+TGG 0.481343 8_4:-11225268 Msa1313330:CDS
TATAAATGGTGTTATGAGAA+AGG 0.482339 8_4:-11223142 Msa1313330:CDS
TCTCTTACTTGCCACCTCCA+TGG 0.484674 8_4:+11223003 None:intergenic
ACTGTATGAGTATGTAGAAC+TGG 0.484729 8_4:+11221859 None:intergenic
AGAAGTTCCATTTCTTCACC+TGG 0.485238 8_4:+11224414 None:intergenic
ATCAATGATTTGGGATAAGA+AGG 0.487028 8_4:+11225414 None:intergenic
ACTGGAACTGAGTCCTCTCC+AGG 0.491202 8_4:+11224059 None:intergenic
AAGCAAGAGGACATTCTGAT+AGG 0.492799 8_4:+11224012 None:intergenic
AAAGTAAATACCTAATTCAC+GGG 0.496900 8_4:+11221666 None:intergenic
AAGAAACTCAAAGATCAGCT+TGG 0.502068 8_4:-11223331 Msa1313330:CDS
CCACAGTAAGAATGAAAAGA+AGG 0.505274 8_4:-11221930 Msa1313330:CDS
GCAAATCTCGATTTCAAGCT+CGG 0.507917 8_4:-11222867 Msa1313330:intron
GAAGGATGCCTATCTTAGTA+AGG 0.508620 8_4:-11221912 Msa1313330:CDS
TTCCACTAGGCACTCTTGGA+TGG 0.509240 8_4:-11225881 Msa1313330:CDS
AAAAGTAAATACCTAATTCA+CGG 0.515492 8_4:+11221665 None:intergenic
TCCATGTATTCTTCTTTGCA+AGG 0.516199 8_4:+11225350 None:intergenic
TCCATGGATTGAATTGATAT+GGG 0.517615 8_4:+11223019 None:intergenic
GTCCTGGTCTTGACTTGGCA+AGG 0.519158 8_4:-11222635 Msa1313330:CDS
AGCCTTTGTCCTCCTCCAAA+AGG 0.520707 8_4:+11222660 None:intergenic
AACAAGGTGATGCAGAAAGA+TGG 0.521247 8_4:+11222602 None:intergenic
GGAGGACAAAGGCTGTGTCC+TGG 0.527656 8_4:-11222651 Msa1313330:CDS
GCATCTGTTGAAACTATGGT+AGG 0.528354 8_4:+11225483 None:intergenic
GCCCATATCAATTCAATCCA+TGG 0.528496 8_4:-11223020 Msa1313330:CDS
TATACTACAAAGTGATGCAA+AGG 0.530469 8_4:-11225445 Msa1313330:CDS
ATCAATGGCAAATTGGAAAG+AGG 0.541562 8_4:-11225253 Msa1313330:CDS
GATAGAGTTTGGTTCCTGGT+AGG 0.545482 8_4:+11224340 None:intergenic
CATGAAGCTCTCAGGGCGGT+CGG 0.547597 8_4:+11225815 None:intergenic
CAAAGAAATCAGCTTCCACT+AGG 0.548481 8_4:-11225894 Msa1313330:CDS
TGAAGTTCCAAGAGATGTAG+TGG 0.566054 8_4:-11224156 Msa1313330:CDS
AACTCAAAGATCAGCTTGGG+GGG 0.566190 8_4:-11223327 Msa1313330:CDS
ACCTTGCAAAGAAGAATACA+TGG 0.567029 8_4:-11225351 Msa1313330:CDS
GCTTGGTCATGAAGCTCTCA+GGG 0.568089 8_4:+11225808 None:intergenic
TGCCTTAACCAATACATGAA+AGG 0.571314 8_4:+11224452 None:intergenic
ATCAATTCAATCCATGGAGG+TGG 0.577242 8_4:-11223014 Msa1313330:CDS
GTCAATTGTTGTAAAGCAAG+AGG 0.589441 8_4:+11223999 None:intergenic
GCATTGATTAGTTTGGAACC+AGG 0.594460 8_4:-11224432 Msa1313330:CDS
TGATATGATGATTCCTGGAG+AGG 0.598999 8_4:-11224072 Msa1313330:CDS
GGTATTTAATACCACAAGGA+TGG 0.600127 8_4:-11223095 Msa1313330:CDS
GCCTATCTTAGTAAGGAGAG+TGG 0.601179 8_4:-11221905 Msa1313330:CDS
CATCTGTTGAAACTATGGTA+GGG 0.601336 8_4:+11225484 None:intergenic
GCTGTGTCCTGGTCTTGACT+TGG 0.602444 8_4:-11222640 Msa1313330:CDS
AACCTTGCCAAGTCAAGACC+AGG 0.613082 8_4:+11222633 None:intergenic
TACATACTTCTGCATATCTG+AGG 0.627594 8_4:+11225281 None:intergenic
GCAAACACACACCATCCTTG+TGG 0.629982 8_4:+11223084 None:intergenic
TTGATCAGACGGTCCAAACG+TGG 0.632627 8_4:+11222895 None:intergenic
GGCCATCCAAGAGTGCCTAG+TGG 0.645890 8_4:+11225879 None:intergenic
AAACTCAAAGATCAGCTTGG+GGG 0.657592 8_4:-11223328 Msa1313330:CDS
AAGTAATCATTCCAACACAA+AGG 0.660680 8_4:+11223304 None:intergenic
TCTTTGCCAATAAACCTACC+AGG 0.667808 8_4:-11224354 Msa1313330:CDS
ATTACCTGAATTGAGTAACA+AGG 0.672107 8_4:+11222586 None:intergenic
GAAACTCAAAGATCAGCTTG+GGG 0.674346 8_4:-11223329 Msa1313330:CDS
GGCTAATGTAGACACACGTG+TGG 0.683236 8_4:-11221771 Msa1313330:three_prime_UTR
AAAGGGTATTTAATACCACA+AGG 0.700611 8_4:-11223099 Msa1313330:CDS
CATATCAATTCAATCCATGG+AGG 0.719309 8_4:-11223017 Msa1313330:CDS
TGGTCATGAAGCTCTCAGGG+CGG 0.723334 8_4:+11225811 None:intergenic
AAGTAAATACCTAATTCACG+GGG 0.751726 8_4:+11221667 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATATATATTTTAGAGA+AGG + chr8_4:11222630-11222649 None:intergenic 10.0%
!!! TTCTCTAAAATATATATATT+TGG - chr8_4:11222629-11222648 Msa1313330:CDS 10.0%
!! AAATATATATATTTGGCAAT+TGG - chr8_4:11222636-11222655 Msa1313330:CDS 15.0%
!! TATATCTTAGTTATCTTTAT+AGG - chr8_4:11222998-11223017 Msa1313330:intron 15.0%
!! ATATCTTAGTTATCTTTATA+GGG - chr8_4:11222999-11223018 Msa1313330:intron 15.0%
!! ATATGTATATTTGAAAATCA+TGG - chr8_4:11223695-11223714 Msa1313330:intron 15.0%
!! AATAAGTCAGTATAAAATTA+TGG + chr8_4:11224408-11224427 None:intergenic 15.0%
!!! TTTTATTTCAACATCTTTTA+AGG + chr8_4:11224505-11224524 None:intergenic 15.0%
!! TTAAAAGATGTTGAAATAAA+AGG - chr8_4:11224504-11224523 Msa1313330:intron 15.0%
!! TAAAAGATGTTGAAATAAAA+GGG - chr8_4:11224505-11224524 Msa1313330:intron 15.0%
!! AAAATTAACTATAAAGAAAC+TGG + chr8_4:11224864-11224883 None:intergenic 15.0%
!! AATAGGTTAATTAATGTAAT+GGG - chr8_4:11224898-11224917 Msa1313330:intron 15.0%
!! AAATATTAGAGTTCAAACTT+TGG + chr8_4:11222532-11222551 None:intergenic 20.0%
!! TGAGTTGTAAAAGTAATAAT+TGG - chr8_4:11222755-11222774 Msa1313330:intron 20.0%
!! TGTTTGTAGAAATTAATTGT+TGG + chr8_4:11223104-11223123 None:intergenic 20.0%
!!! ACTTCTAAAAAAACATTTTC+AGG - chr8_4:11223224-11223243 Msa1313330:intron 20.0%
!! TAATTTGACTACAATATAGA+AGG + chr8_4:11223818-11223837 None:intergenic 20.0%
!!! TGTTATTTTAACTTTAGACT+AGG + chr8_4:11223886-11223905 None:intergenic 20.0%
!!! AATTTTTCCTTAGACAAAAT+TGG - chr8_4:11223986-11224005 Msa1313330:intron 20.0%
!! ATAGTCATATATGTATAGAA+AGG + chr8_4:11224032-11224051 None:intergenic 20.0%
!! TATGACTATAAACATTCAAA+AGG - chr8_4:11224043-11224062 Msa1313330:CDS 20.0%
!! ATGACTATAAACATTCAAAA+GGG - chr8_4:11224044-11224063 Msa1313330:CDS 20.0%
!!! TAAATAATTGAAAGTTCTAG+TGG - chr8_4:11224100-11224119 Msa1313330:CDS 20.0%
!! TTGAGATTATTCAAAAACTT+TGG + chr8_4:11224157-11224176 None:intergenic 20.0%
!!! AAGTTTTTGAATAATCTCAA+TGG - chr8_4:11224157-11224176 Msa1313330:CDS 20.0%
!! CCAAAAGCTAATTAAAAAAT+CGG + chr8_4:11224228-11224247 None:intergenic 20.0%
!! AGAATGGGAAATATTATAAA+TGG - chr8_4:11224465-11224484 Msa1313330:intron 20.0%
!! GAATAGGTTAATTAATGTAA+TGG - chr8_4:11224897-11224916 Msa1313330:intron 20.0%
!! ATAGGTTAATTAATGTAATG+GGG - chr8_4:11224899-11224918 Msa1313330:intron 20.0%
!! CAAAATTATTACATAAGAGA+AGG - chr8_4:11225109-11225128 Msa1313330:intron 20.0%
!! ATACACAAGCAAAATAAAAA+AGG - chr8_4:11225803-11225822 Msa1313330:CDS 20.0%
!! GCAAAATAAAAAAGGATAAA+TGG - chr8_4:11225811-11225830 Msa1313330:CDS 20.0%
!! AAATAAAAAAGGATAAATGG+AGG - chr8_4:11225814-11225833 Msa1313330:CDS 20.0%
!! AATAAAAAAGGATAAATGGA+GGG - chr8_4:11225815-11225834 Msa1313330:CDS 20.0%
!! AAAAGTAAATACCTAATTCA+CGG + chr8_4:11225959-11225978 None:intergenic 20.0%
! TTTAACTCACTTTCATTCAT+AGG - chr8_4:11221879-11221898 Msa1313330:exon 25.0%
!!! AAGATTGTTTGTTTTTGACA+AGG - chr8_4:11222047-11222066 Msa1313330:intron 25.0%
! ATTAACTGCATCAATGATTT+GGG + chr8_4:11222219-11222238 None:intergenic 25.0%
! AAATCATTGATGCAGTTAAT+GGG - chr8_4:11222219-11222238 Msa1313330:intron 25.0%
! GTTTCATCTTGTATGTATAT+AGG + chr8_4:11222399-11222418 None:intergenic 25.0%
! CATACAAGATGAAACAAAAA+AGG - chr8_4:11222404-11222423 Msa1313330:intron 25.0%
!! ATATTTTACCTTCAATCTCA+TGG - chr8_4:11222546-11222565 Msa1313330:intron 25.0%
! AACAACTTGAACATAGAAAA+AGG + chr8_4:11222667-11222686 None:intergenic 25.0%
!! TTTGTCACATGATTTTTGAA+TGG + chr8_4:11222703-11222722 None:intergenic 25.0%
! TGATCAAATTATCTATCTAG+CGG - chr8_4:11222778-11222797 Msa1313330:intron 25.0%
! GTTTAGATTAGGGATAAATT+TGG - chr8_4:11222806-11222825 Msa1313330:intron 25.0%
! ATATCATGTTGAAACAAAGT+TGG + chr8_4:11222954-11222973 None:intergenic 25.0%
! AAGAAGAAGTGATTAATTGT+TGG + chr8_4:11223133-11223152 None:intergenic 25.0%
! ATTATTGATATGATGATTCC+TGG - chr8_4:11223544-11223563 Msa1313330:intron 25.0%
! GATGGTTAATAAAAATGACT+AGG + chr8_4:11223758-11223777 None:intergenic 25.0%
! GATTAATTATGTTCAGAAGA+TGG + chr8_4:11223776-11223795 None:intergenic 25.0%
! ACAGATGAAAAGAAACATAA+TGG + chr8_4:11223953-11223972 None:intergenic 25.0%
! ATTCAAAAACTTTGGTGAAT+GGG + chr8_4:11224149-11224168 None:intergenic 25.0%
! TATTCAAAAACTTTGGTGAA+TGG + chr8_4:11224150-11224169 None:intergenic 25.0%
! TTGAATAATCTCAATGGTTA+TGG - chr8_4:11224163-11224182 Msa1313330:CDS 25.0%
!! CTAATTAAAAAATCGGTTCA+AGG + chr8_4:11224221-11224240 None:intergenic 25.0%
!!! CCGATTTTTTAATTAGCTTT+TGG - chr8_4:11224225-11224244 Msa1313330:intron 25.0%
!!! ACTTTTGTTTGTGTTTGATA+AGG + chr8_4:11224382-11224401 None:intergenic 25.0%
! ATTATATGCCTAACTTATAC+AGG - chr8_4:11224425-11224444 Msa1313330:CDS 25.0%
!!! TATAAATGGTGTTATGAGAA+AGG - chr8_4:11224479-11224498 Msa1313330:intron 25.0%
! AGATCTTGGTATAGTTTATA+TGG - chr8_4:11224658-11224677 Msa1313330:intron 25.0%
!!! ATTTGCTTATTTTGATCAGA+CGG + chr8_4:11224740-11224759 None:intergenic 25.0%
! TTTCATGTTACTACATGAAT+AGG - chr8_4:11224881-11224900 Msa1313330:intron 25.0%
! TAGGTTAATTAATGTAATGG+GGG - chr8_4:11224900-11224919 Msa1313330:intron 25.0%
! ATGTTATATTGCTCAAACTT+AGG - chr8_4:11225078-11225097 Msa1313330:intron 25.0%
! TGAAAATAGAAAATCATGAG+TGG + chr8_4:11225202-11225221 None:intergenic 25.0%
! TTCAAACTAAATTGAGTAGA+AGG - chr8_4:11225218-11225237 Msa1313330:CDS 25.0%
! TAATTGCATATGGACAAATA+TGG - chr8_4:11225299-11225318 Msa1313330:CDS 25.0%
! ACTGTTTACACTATACAATA+AGG - chr8_4:11225461-11225480 Msa1313330:CDS 25.0%
! AAAGTAAATACCTAATTCAC+GGG + chr8_4:11225958-11225977 None:intergenic 25.0%
! GAAAGTGTGAGAAAAAACAA+TGG - chr8_4:11221612-11221631 Msa1313330:three_prime_UTR 30.0%
AAAAAACAATGGACACTACT+TGG - chr8_4:11221623-11221642 Msa1313330:three_prime_UTR 30.0%
AAAAACAATGGACACTACTT+GGG - chr8_4:11221624-11221643 Msa1313330:three_prime_UTR 30.0%
ATCAAAGTGCACAAGAAAAT+TGG + chr8_4:11221664-11221683 None:intergenic 30.0%
AGCACAAGAAACAAAATCTA+TGG + chr8_4:11221782-11221801 None:intergenic 30.0%
! TGTATGATGATGAACTTACA+TGG + chr8_4:11221845-11221864 None:intergenic 30.0%
CAAAAACAAACAATCTTGCA+CGG + chr8_4:11222044-11222063 None:intergenic 30.0%
!!! TTGTTTTTGACAAGGATTTG+TGG - chr8_4:11222055-11222074 Msa1313330:intron 30.0%
TATACTACAAAGTGATGCAA+AGG - chr8_4:11222176-11222195 Msa1313330:intron 30.0%
! ATCAATGATTTGGGATAAGA+AGG + chr8_4:11222210-11222229 None:intergenic 30.0%
CATTAACTGCATCAATGATT+TGG + chr8_4:11222220-11222239 None:intergenic 30.0%
CAAATCATTGATGCAGTTAA+TGG - chr8_4:11222218-11222237 Msa1313330:intron 30.0%
! TCTTCTATTTTGCTCATCAA+TGG - chr8_4:11222246-11222265 Msa1313330:intron 30.0%
AGAAGAATACATGGACTTAT+TGG - chr8_4:11222279-11222298 Msa1313330:intron 30.0%
GAAGTATGTACAAGAATCAA+TGG - chr8_4:11222353-11222372 Msa1313330:intron 30.0%
TACAAGAATCAATGGCAAAT+TGG - chr8_4:11222361-11222380 Msa1313330:intron 30.0%
CATCTTGTATGTATATAGGT+TGG + chr8_4:11222395-11222414 None:intergenic 30.0%
TTTATCTTGTGTCAGTTGAA+TGG + chr8_4:11222591-11222610 None:intergenic 30.0%
CTCATGCAAAAACTTAAGTA+GGG + chr8_4:11222739-11222758 None:intergenic 30.0%
ACTCATGCAAAAACTTAAGT+AGG + chr8_4:11222740-11222759 None:intergenic 30.0%
AGTCTTTGTCAAAATCACAA+CGG + chr8_4:11222847-11222866 None:intergenic 30.0%
TAGGGTTCATAATCATTTAC+AGG - chr8_4:11223017-11223036 Msa1313330:CDS 30.0%
AACCATGCTGCATTAAAAAA+AGG - chr8_4:11223040-11223059 Msa1313330:CDS 30.0%
AATTGTTGGAGTTAGTATCT+TGG + chr8_4:11223090-11223109 None:intergenic 30.0%
!! CATTTTCAGGAATTTATCTC+TGG - chr8_4:11223237-11223256 Msa1313330:intron 30.0%
CTGTAAAGATTGATAGAGTT+TGG + chr8_4:11223295-11223314 None:intergenic 30.0%
CAAACTCTATCAATCTTTAC+AGG - chr8_4:11223293-11223312 Msa1313330:CDS 30.0%
AGTAATGATGACTTCACATT+TGG - chr8_4:11223371-11223390 Msa1313330:intron 30.0%
GTTTCAGGCAAAAAAGAAAA+TGG - chr8_4:11223393-11223412 Msa1313330:intron 30.0%
GTCCAAGCTAAAAGAAATAA+AGG - chr8_4:11223436-11223455 Msa1313330:intron 30.0%
!! TGCCTTTATTTCTTTTAGCT+TGG + chr8_4:11223441-11223460 None:intergenic 30.0%
TCTTGCTTTACAACAATTGA+CGG - chr8_4:11223624-11223643 Msa1313330:intron 30.0%
TCATGGTTAATAGTGTTTAG+CGG - chr8_4:11223712-11223731 Msa1313330:intron 30.0%
!!! CGGTTCAAGGAATTTTTTAA+GGG + chr8_4:11224208-11224227 None:intergenic 30.0%
!!! TCGGTTCAAGGAATTTTTTA+AGG + chr8_4:11224209-11224228 None:intergenic 30.0%
AAGTAATCATTCCAACACAA+AGG + chr8_4:11224320-11224339 None:intergenic 30.0%
!!! TGGCTTACTTTTTGAGTAAA+TGG + chr8_4:11224350-11224369 None:intergenic 30.0%
AGTGATTACCTGTATAAGTT+AGG + chr8_4:11224436-11224455 None:intergenic 30.0%
! AATCACTGAAACTTTGAGAA+TGG - chr8_4:11224449-11224468 Msa1313330:CDS 30.0%
! ATCACTGAAACTTTGAGAAT+GGG - chr8_4:11224450-11224469 Msa1313330:CDS 30.0%
!! AAAGGGTATTTAATACCACA+AGG - chr8_4:11224522-11224541 Msa1313330:intron 30.0%
! TCCATGGATTGAATTGATAT+GGG + chr8_4:11224605-11224624 None:intergenic 30.0%
GGTATAGTTTATATGGATCT+AGG - chr8_4:11224665-11224684 Msa1313330:intron 30.0%
! AGGTTAATTAATGTAATGGG+GGG - chr8_4:11224901-11224920 Msa1313330:intron 30.0%
! AGTTACAATTTCACTCCTTT+TGG - chr8_4:11224946-11224965 Msa1313330:intron 30.0%
ATTACCTGAATTGAGTAACA+AGG + chr8_4:11225038-11225057 None:intergenic 30.0%
TTGCTCTTATTCTATCTACT+TGG + chr8_4:11225266-11225285 None:intergenic 30.0%
TGTCTCTTTCTAATTGCATA+TGG - chr8_4:11225289-11225308 Msa1313330:CDS 30.0%
AATCCAACTAGTAAAGTTTG+TGG - chr8_4:11225322-11225341 Msa1313330:CDS 30.0%
ATCCAACTAGTAAAGTTTGT+GGG - chr8_4:11225323-11225342 Msa1313330:CDS 30.0%
! TGCAGCATTTAAAGTCTTTA+TGG + chr8_4:11225351-11225370 None:intergenic 30.0%
CAAATCTTACAACAAAGGTT+AGG + chr8_4:11225399-11225418 None:intergenic 30.0%
ACACACAAATCTTACAACAA+AGG + chr8_4:11225404-11225423 None:intergenic 30.0%
GTAAGATTTGTGTGTTTCAT+TGG - chr8_4:11225409-11225428 Msa1313330:CDS 30.0%
! TATTCAAGTTCAGAGATGTT+AGG + chr8_4:11225542-11225561 None:intergenic 30.0%
TTTAATGTTTCACATGCAGA+TGG - chr8_4:11225637-11225656 Msa1313330:intron 30.0%
! TTCTTTTCATTCTTACTGTG+GGG + chr8_4:11225692-11225711 None:intergenic 30.0%
! CTTCTTTTCATTCTTACTGT+GGG + chr8_4:11225693-11225712 None:intergenic 30.0%
! GAAAAAGTTGTGTCTTTTGA+AGG - chr8_4:11225930-11225949 Msa1313330:CDS 30.0%
AAGTAAATACCTAATTCACG+GGG + chr8_4:11225957-11225976 None:intergenic 30.0%
!! GGAAGCTGATTTCTTTGTTT+TGG + chr8_4:11221724-11221743 None:intergenic 35.0%
TCTATGGTTTCGCCAATAAA+AGG + chr8_4:11221766-11221785 None:intergenic 35.0%
! ATTTTACAACTCTCTCTGAG+GGG + chr8_4:11221985-11222004 None:intergenic 35.0%
! CATTTTACAACTCTCTCTGA+GGG + chr8_4:11221986-11222005 None:intergenic 35.0%
GTGTTCAAGTCACACATATT+TGG - chr8_4:11222111-11222130 Msa1313330:intron 35.0%
CATCTGTTGAAACTATGGTA+GGG + chr8_4:11222140-11222159 None:intergenic 35.0%
ATCTGCATCTGTTGAAACTA+TGG + chr8_4:11222145-11222164 None:intergenic 35.0%
ACCTTGCAAAGAAGAATACA+TGG - chr8_4:11222270-11222289 Msa1313330:intron 35.0%
TCCATGTATTCTTCTTTGCA+AGG + chr8_4:11222274-11222293 None:intergenic 35.0%
CTTCAAGTCTCAACAGTTAA+AGG - chr8_4:11222308-11222327 Msa1313330:intron 35.0%
TACATACTTCTGCATATCTG+AGG + chr8_4:11222343-11222362 None:intergenic 35.0%
ATCAATGGCAAATTGGAAAG+AGG - chr8_4:11222368-11222387 Msa1313330:intron 35.0%
AGAGAGAAGCAAACAAAGAT+AGG + chr8_4:11222480-11222499 None:intergenic 35.0%
AAACTTAAGTAGGGAAAGGA+AGG + chr8_4:11222730-11222749 None:intergenic 35.0%
GCAAAAACTTAAGTAGGGAA+AGG + chr8_4:11222734-11222753 None:intergenic 35.0%
TAGCGGTGAATGTTTAGATT+AGG - chr8_4:11222795-11222814 Msa1313330:intron 35.0%
AGCGGTGAATGTTTAGATTA+GGG - chr8_4:11222796-11222815 Msa1313330:intron 35.0%
GGATAAATTTGGCACAATCA+CGG - chr8_4:11222817-11222836 Msa1313330:intron 35.0%
!!! CTCCTTTTTTTAATGCAGCA+TGG + chr8_4:11223045-11223064 None:intergenic 35.0%
GGAGTTAGTATCTTGGAAAA+TGG + chr8_4:11223083-11223102 None:intergenic 35.0%
AATACATGAAAGGCAATCTG+GGG + chr8_4:11223162-11223181 None:intergenic 35.0%
CAATACATGAAAGGCAATCT+GGG + chr8_4:11223163-11223182 None:intergenic 35.0%
!! TGCCTTTCATGTATTGGTTA+AGG - chr8_4:11223167-11223186 Msa1313330:CDS 35.0%
TGCCTTAACCAATACATGAA+AGG + chr8_4:11223172-11223191 None:intergenic 35.0%
!! GGTTAAGGCATTGATTAGTT+TGG - chr8_4:11223182-11223201 Msa1313330:intron 35.0%
GGTTTATTGGCAAAGACATT+AGG + chr8_4:11223263-11223282 None:intergenic 35.0%
! ATGACTTCACATTTGGTTTC+AGG - chr8_4:11223378-11223397 Msa1313330:intron 35.0%
GTCAATTGTTGTAAAGCAAG+AGG + chr8_4:11223625-11223644 None:intergenic 35.0%
TAACTTTAGACTAGGCCATT+AGG + chr8_4:11223878-11223897 None:intergenic 35.0%
!! AGCTTTTGGTAACTGAACTT+TGG - chr8_4:11224239-11224258 Msa1313330:intron 35.0%
AAGAAACTCAAAGATCAGCT+TGG - chr8_4:11224290-11224309 Msa1313330:intron 35.0%
AGAAACTCAAAGATCAGCTT+GGG - chr8_4:11224291-11224310 Msa1313330:intron 35.0%
GGTATTTAATACCACAAGGA+TGG - chr8_4:11224526-11224545 Msa1313330:intron 35.0%
! CTCCATGGATTGAATTGATA+TGG + chr8_4:11224606-11224625 None:intergenic 35.0%
CATATCAATTCAATCCATGG+AGG - chr8_4:11224604-11224623 Msa1313330:intron 35.0%
! TACCAAGATCTAAAGTGTAG+CGG + chr8_4:11224649-11224668 None:intergenic 35.0%
ATCGTCTAATCAAGATCGAA+CGG + chr8_4:11224825-11224844 None:intergenic 35.0%
! TACAATTTCACTCCTTTTGG+AGG - chr8_4:11224949-11224968 Msa1313330:intron 35.0%
ATCACCTTGTTACTCAATTC+AGG - chr8_4:11225031-11225050 Msa1313330:intron 35.0%
TCTATCTACTTGGACACATA+TGG + chr8_4:11225256-11225275 None:intergenic 35.0%
TCCAACTAGTAAAGTTTGTG+GGG - chr8_4:11225324-11225343 Msa1313330:CDS 35.0%
CAACAAAGGTTAGGATCAAA+TGG + chr8_4:11225390-11225409 None:intergenic 35.0%
! CCTTCTTTTCATTCTTACTG+TGG + chr8_4:11225694-11225713 None:intergenic 35.0%
CCACAGTAAGAATGAAAAGA+AGG - chr8_4:11225691-11225710 Msa1313330:intron 35.0%
! AGAACTGGCTTCATACTTTA+TGG + chr8_4:11225750-11225769 None:intergenic 35.0%
ACTGTATGAGTATGTAGAAC+TGG + chr8_4:11225765-11225784 None:intergenic 35.0%
! CTACATTAGCCAATTTTTCC+TGG + chr8_4:11225841-11225860 None:intergenic 35.0%
! CACACTTTCTATGCTAGCTT+TGG + chr8_4:11221601-11221620 None:intergenic 40.0%
CAAAGAAATCAGCTTCCACT+AGG - chr8_4:11221727-11221746 Msa1313330:three_prime_UTR 40.0%
! ACTCTTGGATGGCCTTTTAT+TGG - chr8_4:11221751-11221770 Msa1313330:three_prime_UTR 40.0%
GTCTCTTGAGCTTCATAGAA+AGG + chr8_4:11221913-11221932 None:intergenic 40.0%
! CCATTTTACAACTCTCTCTG+AGG + chr8_4:11221987-11222006 None:intergenic 40.0%
CCTCAGAGAGAGTTGTAAAA+TGG - chr8_4:11221984-11222003 Msa1313330:intron 40.0%
! GTGTTGTTGCAAACTGTTGT+AGG - chr8_4:11222079-11222098 Msa1313330:intron 40.0%
GTTGCAAACTGTTGTAGGTA+TGG - chr8_4:11222084-11222103 Msa1313330:intron 40.0%
GCATCTGTTGAAACTATGGT+AGG + chr8_4:11222141-11222160 None:intergenic 40.0%
AGAAGTCACCATGAGATTGA+AGG + chr8_4:11222557-11222576 None:intergenic 40.0%
CTAGAGCTTCAACAAACTCA+CGG - chr8_4:11222872-11222891 Msa1313330:CDS 40.0%
CCAATACATGAAAGGCAATC+TGG + chr8_4:11223164-11223183 None:intergenic 40.0%
CCAGATTGCCTTTCATGTAT+TGG - chr8_4:11223161-11223180 Msa1313330:CDS 40.0%
!! GCATTGATTAGTTTGGAACC+AGG - chr8_4:11223189-11223208 Msa1313330:intron 40.0%
! TTTGGAACCAGGTGAAGAAA+TGG - chr8_4:11223200-11223219 Msa1313330:intron 40.0%
AGAAGTTCCATTTCTTCACC+TGG + chr8_4:11223210-11223229 None:intergenic 40.0%
TCTTTGCCAATAAACCTACC+AGG - chr8_4:11223267-11223286 Msa1313330:intron 40.0%
TTGGTTCCTGGTAGGTTTAT+TGG + chr8_4:11223276-11223295 None:intergenic 40.0%
! GATTGATAGAGTTTGGTTCC+TGG + chr8_4:11223288-11223307 None:intergenic 40.0%
CAGGCAAAGCATGCTATATA+TGG + chr8_4:11223349-11223368 None:intergenic 40.0%
GTGAAGTCATCATTACTTGC+AGG + chr8_4:11223368-11223387 None:intergenic 40.0%
TGAAGTTCCAAGAGATGTAG+TGG - chr8_4:11223465-11223484 Msa1313330:intron 40.0%
TGATATGATGATTCCTGGAG+AGG - chr8_4:11223549-11223568 Msa1313330:intron 40.0%
GTAGCTAGAGTCATAAGAAC+TGG + chr8_4:11223583-11223602 None:intergenic 40.0%
AAGCAAGAGGACATTCTGAT+AGG + chr8_4:11223612-11223631 None:intergenic 40.0%
AGCGGATAATTAACGAGTAG+CGG - chr8_4:11223730-11223749 Msa1313330:intron 40.0%
CGAGTCAAAAGTTATGCAGA+GGG - chr8_4:11223850-11223869 Msa1313330:intron 40.0%
! CTAGCAGCCAATTTTGTCTA+AGG + chr8_4:11223996-11224015 None:intergenic 40.0%
TAGACAAAATTGGCTGCTAG+TGG - chr8_4:11223996-11224015 Msa1313330:intron 40.0%
CAAAAACTTTGGTGAATGGG+AGG + chr8_4:11224146-11224165 None:intergenic 40.0%
! ACTGAACTTTGGTGATTCAC+AGG - chr8_4:11224250-11224269 Msa1313330:intron 40.0%
GAAACTCAAAGATCAGCTTG+GGG - chr8_4:11224292-11224311 Msa1313330:intron 40.0%
AAACTCAAAGATCAGCTTGG+GGG - chr8_4:11224293-11224312 Msa1313330:intron 40.0%
GTTTGATAAGGAACTGTGCT+TGG + chr8_4:11224370-11224389 None:intergenic 40.0%
GCCCATATCAATTCAATCCA+TGG - chr8_4:11224601-11224620 Msa1313330:intron 40.0%
ATCAATTCAATCCATGGAGG+TGG - chr8_4:11224607-11224626 Msa1313330:intron 40.0%
TTCCGCTACACTTTAGATCT+TGG - chr8_4:11224644-11224663 Msa1313330:intron 40.0%
GCAAATCTCGATTTCAAGCT+CGG - chr8_4:11224754-11224773 Msa1313330:intron 40.0%
! CGATTTCAAGCTCGGTATTT+TGG - chr8_4:11224762-11224781 Msa1313330:intron 40.0%
!! TAATGTAATGGGGGGTTTTC+AGG - chr8_4:11224909-11224928 Msa1313330:intron 40.0%
!! AATTTCACTCCTTTTGGAGG+AGG - chr8_4:11224952-11224971 Msa1313330:intron 40.0%
AACAAGGTGATGCAGAAAGA+TGG + chr8_4:11225022-11225041 None:intergenic 40.0%
AACTCCACGTAGTTACAGAA+TGG + chr8_4:11225149-11225168 None:intergenic 40.0%
TAACTACGTGGAGTTCATGT+AGG - chr8_4:11225154-11225173 Msa1313330:intron 40.0%
CCAACTAGTAAAGTTTGTGG+GGG - chr8_4:11225325-11225344 Msa1313330:CDS 40.0%
GAAGGATGCCTATCTTAGTA+AGG - chr8_4:11225709-11225728 Msa1313330:intron 40.0%
TCCACTCTCCTTACTAAGAT+AGG + chr8_4:11225720-11225739 None:intergenic 40.0%
! TCCATTTTACCTGCTATGCT+AGG - chr8_4:11225993-11226012 Msa1313330:CDS 40.0%
! CCATTTTACCTGCTATGCTA+GGG - chr8_4:11225994-11226013 Msa1313330:exon 40.0%
ATTCTGACACCAACACACGT+GGG + chr8_4:11222503-11222522 None:intergenic 45.0%
! GATAGAGTTTGGTTCCTGGT+AGG + chr8_4:11223284-11223303 None:intergenic 45.0%
AGCACATCCACTACATCTCT+TGG + chr8_4:11223475-11223494 None:intergenic 45.0%
GCGAGTCAAAAGTTATGCAG+AGG - chr8_4:11223849-11223868 Msa1313330:intron 45.0%
CAAAATTGGCTGCTAGTGGT+AGG - chr8_4:11224000-11224019 Msa1313330:CDS 45.0%
! GAACTTTGGTGATTCACAGG+TGG - chr8_4:11224253-11224272 Msa1313330:intron 45.0%
AACTCAAAGATCAGCTTGGG+GGG - chr8_4:11224294-11224313 Msa1313330:intron 45.0%
GCTAACTGCATGCAATCACA+GGG + chr8_4:11224707-11224726 None:intergenic 45.0%
AACGGCTCAGAATTCAGTGT+CGG + chr8_4:11224807-11224826 None:intergenic 45.0%
!! AATGGGGGGTTTTCAGGATA+AGG - chr8_4:11224915-11224934 Msa1313330:intron 45.0%
TTGCTCAAACTTAGGAGCAG+AGG - chr8_4:11225086-11225105 Msa1313330:intron 45.0%
TCTGCCATTCTGTAACTACG+TGG - chr8_4:11225142-11225161 Msa1313330:intron 45.0%
CCCCCACAAACTTTACTAGT+TGG + chr8_4:11225328-11225347 None:intergenic 45.0%
TACACTTGACCACTGTCACT+TGG - chr8_4:11225437-11225456 Msa1313330:CDS 45.0%
! ACACTTGACCACTGTCACTT+GGG - chr8_4:11225438-11225457 Msa1313330:CDS 45.0%
TAAACAGTCCCAAGTGACAG+TGG + chr8_4:11225449-11225468 None:intergenic 45.0%
GCCTATCTTAGTAAGGAGAG+TGG - chr8_4:11225716-11225735 Msa1313330:intron 45.0%
AAAAGGATAAATGGAGGGCC+AGG - chr8_4:11225820-11225839 Msa1313330:CDS 45.0%
AATGGAGGGCCAGGAAAAAT+TGG - chr8_4:11225829-11225848 Msa1313330:CDS 45.0%
TTTGAAGGACCCCGTGAATT+AGG - chr8_4:11225945-11225964 Msa1313330:CDS 45.0%
CCCTAGCATAGCAGGTAAAA+TGG + chr8_4:11225997-11226016 None:intergenic 45.0%
! CTTTTCTTCCCTAGCATAGC+AGG + chr8_4:11226005-11226024 None:intergenic 45.0%
CTGCTATGCTAGGGAAGAAA+AGG - chr8_4:11226003-11226022 Msa1313330:exon 45.0%
TTCCACTAGGCACTCTTGGA+TGG - chr8_4:11221740-11221759 Msa1313330:three_prime_UTR 50.0%
GCTTGGTCATGAAGCTCTCA+GGG + chr8_4:11221816-11221835 None:intergenic 50.0%
AACTTACATGGCGCATCGCT+TGG + chr8_4:11221833-11221852 None:intergenic 50.0%
ACACACTCAGAGACTGAGAG+GGG + chr8_4:11222446-11222465 None:intergenic 50.0%
CACACACTCAGAGACTGAGA+GGG + chr8_4:11222447-11222466 None:intergenic 50.0%
ACACACACTCAGAGACTGAG+AGG + chr8_4:11222448-11222467 None:intergenic 50.0%
GATTCTGACACCAACACACG+TGG + chr8_4:11222504-11222523 None:intergenic 50.0%
GTTATGCAGAGGGCTCCTAA+TGG - chr8_4:11223860-11223879 Msa1313330:intron 50.0%
GCAAACACACACCATCCTTG+TGG + chr8_4:11224540-11224559 None:intergenic 50.0%
TCTCTTACTTGCCACCTCCA+TGG + chr8_4:11224621-11224640 None:intergenic 50.0%
GGCTAACTGCATGCAATCAC+AGG + chr8_4:11224708-11224727 None:intergenic 50.0%
TGCATGCAGTTAGCCACGTT+TGG - chr8_4:11224713-11224732 Msa1313330:intron 50.0%
TTGATCAGACGGTCCAAACG+TGG + chr8_4:11224729-11224748 None:intergenic 50.0%
!! CTCCTTTTGGAGGAGGACAA+AGG - chr8_4:11224959-11224978 Msa1313330:intron 50.0%
AGCCTTTGTCCTCCTCCAAA+AGG + chr8_4:11224964-11224983 None:intergenic 50.0%
AACCTTGCCAAGTCAAGACC+AGG + chr8_4:11224991-11225010 None:intergenic 50.0%
!! TGGTCTTGACTTGGCAAGGT+TGG - chr8_4:11224990-11225009 Msa1313330:intron 50.0%
GGCTAATGTAGACACACGTG+TGG - chr8_4:11225850-11225869 Msa1313330:CDS 50.0%
CAGCTTCCACTAGGCACTCT+TGG - chr8_4:11221736-11221755 Msa1313330:three_prime_UTR 55.0%
TGGTCATGAAGCTCTCAGGG+CGG + chr8_4:11221813-11221832 None:intergenic 55.0%
CGCTTGGTCATGAAGCTCTC+AGG + chr8_4:11221817-11221836 None:intergenic 55.0%
CTGAGAGGGGAAGGAAACAG+AGG + chr8_4:11222433-11222452 None:intergenic 55.0%
ACTCAGAGACTGAGAGGGGA+AGG + chr8_4:11222442-11222461 None:intergenic 55.0%
CTTCTCTCTCCCACGTGTGT+TGG - chr8_4:11222491-11222510 Msa1313330:intron 55.0%
ACTGGAACTGAGTCCTCTCC+AGG + chr8_4:11223565-11223584 None:intergenic 55.0%
!! GCTGTGTCCTGGTCTTGACT+TGG - chr8_4:11224981-11225000 Msa1313330:intron 55.0%
!! GTCCTGGTCTTGACTTGGCA+AGG - chr8_4:11224986-11225005 Msa1313330:intron 55.0%
!! GGCCATCCAAGAGTGCCTAG+TGG + chr8_4:11221745-11221764 None:intergenic 60.0%
CATGAAGCTCTCAGGGCGGT+CGG + chr8_4:11221809-11221828 None:intergenic 60.0%
AGCTTGGGGGGCCTTTGTGT+TGG - chr8_4:11224306-11224325 Msa1313330:intron 60.0%
GGAGGACAAAGGCTGTGTCC+TGG - chr8_4:11224970-11224989 Msa1313330:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 11221572 11226071 11221572 ID=Msa1313330;Name=Msa1313330
chr8_4 mRNA 11221572 11226071 11221572 ID=Msa1313330-mRNA-1;Parent=Msa1313330;Name=Msa1313330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=59|0.62|0.77|0.88|1|1|9|325|495
chr8_4 exon 11221572 11221987 11221572 ID=Msa1313330-mRNA-1:exon:4237;Parent=Msa1313330-mRNA-1
chr8_4 exon 11222591 11222712 11222591 ID=Msa1313330-mRNA-1:exon:4236;Parent=Msa1313330-mRNA-1
chr8_4 exon 11222868 11222921 11222868 ID=Msa1313330-mRNA-1:exon:4235;Parent=Msa1313330-mRNA-1
chr8_4 exon 11223011 11223196 11223011 ID=Msa1313330-mRNA-1:exon:4234;Parent=Msa1313330-mRNA-1
chr8_4 exon 11223282 11223371 11223282 ID=Msa1313330-mRNA-1:exon:4233;Parent=Msa1313330-mRNA-1
chr8_4 exon 11223998 11224243 11223998 ID=Msa1313330-mRNA-1:exon:4232;Parent=Msa1313330-mRNA-1
chr8_4 exon 11224320 11224478 11224320 ID=Msa1313330-mRNA-1:exon:4231;Parent=Msa1313330-mRNA-1
chr8_4 exon 11225218 11225542 11225218 ID=Msa1313330-mRNA-1:exon:4230;Parent=Msa1313330-mRNA-1
chr8_4 exon 11225798 11226071 11225798 ID=Msa1313330-mRNA-1:exon:4229;Parent=Msa1313330-mRNA-1
chr8_4 five_prime_UTR 11226013 11226071 11226013 ID=Msa1313330-mRNA-1:five_prime_utr;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11225798 11226012 11225798 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11225218 11225542 11225218 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11224320 11224478 11224320 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11223998 11224243 11223998 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11223282 11223371 11223282 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11223011 11223196 11223011 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11222868 11222921 11222868 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11222591 11222712 11222591 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 CDS 11221897 11221987 11221897 ID=Msa1313330-mRNA-1:cds;Parent=Msa1313330-mRNA-1
chr8_4 three_prime_UTR 11221572 11221896 11221572 ID=Msa1313330-mRNA-1:three_prime_utr;Parent=Msa1313330-mRNA-1
Gene Sequence

>Msa1313330

ATGGACACTACTTGGGTTCTATTTGTGACACCAATTTTCTTGTGCACTTTGATCTTCTACTACAGAAACAGTCTTAGTCTTAAGCTCAAACCAAAACAAAGAAATCAGCTTCCACTAGGCACTCTTGGATGGCCTTTTATTGGCGAAACCATAGATTTTGTTTCTTGTGCTTACACCGACCGCCCTGAGAGCTTCATGACCAAGCGATGCGCCATGTATGGTAAAGTGTTCAAGTCACACATATTTGGAAGCCCTACCATAGTTTCAACAGATGCAGATGTGAACAAGTTTATACTACAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAATCATTGATGCAGTTAATGGGAGAGTCTTCTATTTTGCTCATCAATGGAACCTTGCAAAGAAGAATACATGGACTTATTGGTGCTTTCTTCAAGTCTCAACAGTTAAAGGTTCAGATTACCTCAGATATGCAGAAGTATGTACAAGAATCAATGGCAAATTGGAAAGAGGACCAACCTATATACATACAAGATGAAACAAAAAAGATTGCCTTTCATGTATTGGTTAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTTCTAAAAAAACATTTTCAGGAATTTATCTCTGGCCTAATGTCTTTGCCAATAAACCTACCAGGAACCAAACTCTATCAATCTTTACAGGCAAGTCAAGCAAAAAAGAAAATGGTGAAATTAGTGAGAAAAACTGTCCAAGCTAAAAGAAATAAAGGCATCTTTGAAGTTCCAAGAGATGTAGTGGATGTGCTTCTTAATGATGCAAGTGAGAAATTGACAGATGACTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGACTCAGTTCCAGTTCTTATGACTCTAGCTACAAAATACCTATCAGAATGTCCTCTTGCTTTACAACAATTGACGGTGGAGAATATAAAGCTCAAGAAACTCAAAGATCAGCTTGGGGGGCCTTTGTGTTGGAATGATTACTTATCATTGCCATTTACTCAAAAAGTAATCACTGAAACTTTGAGAATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGAGTGCCCATATCAATTCAATCCATGGAGGTGGCAATTAGCCACGTTTGGACCGTCTGATCAAAATAAGCAAATCTCGATTTCAAGCTCGGATAAGGACATGAACAGTTACAATTTCACTCCTTTTGGAGGAGGACAAAGGCTGTGTCCTGGTCTTGACTTGGCAAGGTTGGAAGCTTCCATCTTTCTGCATCACCTTGTTACTCAATTCAGATGGTATGCAGAAGAAGATACAATAGTGAACTTCCCCACAGTAAGAATGAAAAGAAGGATGCCTATCTTAGTAAGGAGAGTGGAAACTTAG
Protein sequence

>Msa1313330

MDTTWVLFVTPIFLCTLIFYYRNSLSLKLKPKQRNQLPLGTLGWPFIGETIDFVSCAYTDRPESFMTKRCAMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLMQLMGESSILLINGTLQRRIHGLIGAFFKSQQLKVQITSDMQKYVQESMANWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQASQAKKKMVKLVRKTVQAKRNKGIFEVPRDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPLALQQLTVENIKLKKLKDQLGGPLCWNDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQLATFGPSDQNKQISISSSDKDMNSYNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVRRVET*