AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1275090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275090 MtrunA17_Chr8g0341951 94.141 495 8 2 1 495 1 474 0.0 953
Msa1275090 MtrunA17_Chr8g0372411 52.711 461 191 6 38 493 40 478 2.60e-174 499
Msa1275090 MtrunA17_Chr3g0113321 38.745 462 264 7 34 494 26 469 1.41e-114 347
Msa1275090 MtrunA17_Chr5g0403931 34.400 500 292 9 2 491 5 478 2.11e-99 307
Msa1275090 MtrunA17_Chr6g0478161 32.091 483 309 7 1 482 15 479 6.79e-96 299
Msa1275090 MtrunA17_Chr8g0373441 37.831 415 238 8 8 414 10 412 9.26e-93 288
Msa1275090 MtrunA17_Chr7g0226771 32.371 485 294 9 3 483 6 460 6.46e-92 288
Msa1275090 MtrunA17_Chr6g0455461 34.649 456 259 11 33 481 29 452 1.28e-90 284
Msa1275090 MtrunA17_Chr3g0078411 34.430 456 260 11 33 481 29 452 5.33e-90 282
Msa1275090 MtrunA17_Chr7g0219961 34.286 455 259 11 33 480 29 450 1.83e-88 278
Msa1275090 MtrunA17_Chr5g0397971 30.802 474 285 9 5 467 2 443 1.38e-79 256
Msa1275090 MtrunA17_Chr4g0044851 32.110 436 263 8 36 467 36 442 6.87e-74 241
Msa1275090 MtrunA17_Chr8g0369791 30.584 497 299 14 1 488 1 460 2.49e-72 236
Msa1275090 MtrunA17_Chr1g0153371 30.608 477 283 12 1 466 1 440 1.53e-70 232
Msa1275090 MtrunA17_Chr5g0408181 30.087 462 287 10 13 470 9 438 2.33e-70 231
Msa1275090 MtrunA17_Chr5g0404881 47.137 227 113 3 12 236 13 234 7.01e-69 220
Msa1275090 MtrunA17_Chr4g0044841 30.155 451 268 8 28 467 29 443 9.96e-67 222
Msa1275090 MtrunA17_Chr3g0089361 30.926 443 271 9 32 467 35 449 9.58e-66 219
Msa1275090 MtrunA17_Chr5g0443731 29.754 447 283 7 28 467 22 444 1.14e-65 219
Msa1275090 MtrunA17_Chr5g0404861 57.062 177 57 2 319 495 1 158 1.45e-65 209
Msa1275090 MtrunA17_Chr8g0381571 29.243 489 294 11 1 466 1 460 5.11e-64 215
Msa1275090 MtrunA17_Chr2g0293421 30.425 447 279 7 28 466 37 459 5.59e-64 215
Msa1275090 MtrunA17_Chr8g0381541 29.243 489 294 11 1 466 1 460 8.43e-64 215
Msa1275090 MtrunA17_Chr2g0293411 29.375 480 301 9 1 465 1 457 2.13e-63 214
Msa1275090 MtrunA17_Chr5g0443401 29.060 468 293 12 32 486 33 474 1.01e-61 209
Msa1275090 MtrunA17_Chr3g0089351 30.653 398 239 8 76 467 1 367 2.60e-61 206
Msa1275090 MtrunA17_Chr8g0388921 28.051 467 303 9 6 467 11 449 1.09e-60 206
Msa1275090 MtrunA17_Chr1g0164371 30.093 432 276 6 36 467 43 448 3.62e-59 202
Msa1275090 MtrunA17_Chr3g0141801 29.810 473 287 11 6 467 17 455 4.97e-58 199
Msa1275090 MtrunA17_Chr3g0107511 26.025 488 333 6 12 491 8 475 3.26e-54 189
Msa1275090 MtrunA17_Chr8g0380471 26.160 474 317 11 1 467 1 448 4.05e-54 189
Msa1275090 MtrunA17_Chr3g0107501 26.652 469 317 7 30 491 27 475 1.06e-52 185
Msa1275090 MtrunA17_Chr5g0400421 28.636 440 283 8 36 466 44 461 2.92e-50 179
Msa1275090 MtrunA17_Chr8g0372711 28.294 463 287 11 21 471 31 460 3.01e-49 176
Msa1275090 MtrunA17_Chr8g0339861 28.795 448 279 12 32 466 37 457 6.13e-49 175
Msa1275090 MtrunA17_Chr5g0400411 28.018 439 286 9 36 466 44 460 2.89e-48 173
Msa1275090 MtrunA17_Chr5g0437001 45.882 170 62 3 340 494 1 155 2.33e-42 148
Msa1275090 MtrunA17_Chr8g0380931 22.958 453 310 11 27 467 52 477 4.80e-37 142
Msa1275090 MtrunA17_Chr5g0436981 36.774 155 96 1 32 186 23 175 4.18e-36 132
Msa1275090 MtrunA17_Chr8g0381551 25.731 342 220 10 1 319 1 331 1.40e-28 115
Msa1275090 MtrunA17_Chr8g0381561 41.860 129 57 1 338 466 1 111 3.45e-28 108
Msa1275090 MtrunA17_Chr1g0161671 26.582 316 216 8 12 318 7 315 7.81e-26 107
Msa1275090 MtrunA17_Chr3g0089291 26.556 241 167 5 76 313 1 234 8.10e-25 102
Msa1275090 MtrunA17_Chr5g0395321 23.819 487 320 14 4 470 11 466 7.26e-24 104
Msa1275090 MtrunA17_Chr4g0000151 37.500 144 69 3 337 478 3 127 2.99e-23 95.5
Msa1275090 MtrunA17_Chr6g0463551 31.443 194 116 6 190 372 2 189 1.32e-22 95.5
Msa1275090 MtrunA17_Chr5g0395381 31.532 222 128 5 255 472 242 443 8.71e-22 98.2
Msa1275090 MtrunA17_Chr5g0395331 29.832 238 140 6 241 472 259 475 9.07e-21 95.1
Msa1275090 MtrunA17_Chr4g0000171 24.926 337 227 12 1 320 1 328 1.45e-20 92.8
Msa1275090 MtrunA17_Chr4g0013471 25.298 336 229 14 1 321 1 329 5.26e-20 92.0
Msa1275090 MtrunA17_Chr3g0089381 26.364 220 152 4 180 394 2 216 3.87e-19 86.3
Msa1275090 MtrunA17_Chr4g0000161 25.526 333 222 13 1 316 1 324 3.88e-19 88.6
Msa1275090 MtrunA17_Chr1g0205361 29.583 240 133 8 241 470 253 466 4.19e-19 90.1
Msa1275090 MtrunA17_Chr1g0160851 24.048 499 302 15 13 470 4 466 1.18e-18 88.6
Msa1275090 MtrunA17_Chr1g0160861 27.734 256 151 8 227 470 74 307 1.56e-18 87.0
Msa1275090 MtrunA17_Chr1g0176831 29.719 249 148 7 250 493 290 516 2.39e-18 87.8
Msa1275090 MtrunA17_Chr2g0314731 29.707 239 141 7 260 493 270 486 3.54e-18 87.0
Msa1275090 MtrunA17_Chr1g0174481 26.357 258 166 5 240 489 252 493 5.93e-18 86.7
Msa1275090 MtrunA17_Chr6g0463541 34.400 125 61 3 368 490 2 107 6.98e-18 79.3
Msa1275090 MtrunA17_Chr7g0265611 29.200 250 145 7 256 495 282 509 1.35e-17 85.5
Msa1275090 MtrunA17_Chr4g0046321 25.359 418 273 15 73 465 67 470 1.53e-17 85.5
Msa1275090 MtrunA17_Chr1g0174441 27.386 241 149 7 259 489 296 520 1.64e-17 85.5
Msa1275090 MtrunA17_Chr1g0174451 26.506 249 155 7 238 476 253 483 1.78e-17 85.1
Msa1275090 MtrunA17_Chr1g0207841 28.704 216 128 5 259 467 284 480 2.26e-17 84.7
Msa1275090 MtrunA17_Chr4g0046331 28.033 239 152 6 236 465 245 472 3.87e-17 84.0
Msa1275090 MtrunA17_Chr7g0224551 24.350 423 271 15 73 465 63 466 5.06e-17 83.6
Msa1275090 MtrunA17_Chr5g0405001 21.837 490 323 14 6 467 22 479 6.48e-17 83.6
Msa1275090 MtrunA17_Chr4g0030701 28.972 214 133 6 259 467 279 478 7.48e-17 83.2
Msa1275090 MtrunA17_Chr2g0314781 32.044 181 97 5 321 493 11 173 7.57e-17 78.2
Msa1275090 MtrunA17_Chr4g0030711 28.505 214 134 5 259 467 282 481 1.06e-16 82.8
Msa1275090 MtrunA17_Chr1g0164211 30.233 215 121 7 260 467 268 460 1.71e-16 82.0
Msa1275090 MtrunA17_Chr4g0046351 27.197 239 152 7 236 465 245 470 1.77e-16 82.0
Msa1275090 MtrunA17_Chr3g0101631 22.626 495 322 15 1 467 1 462 1.89e-16 82.0
Msa1275090 MtrunA17_Chr8g0362701 26.562 256 154 9 247 489 264 498 2.66e-16 81.6
Msa1275090 MtrunA17_Chr3g0101621 24.074 486 312 15 6 467 5 457 2.68e-16 81.3
Msa1275090 MtrunA17_Chr8g0356001 23.340 467 299 15 35 471 39 476 2.69e-16 81.6
Msa1275090 MtrunA17_Chr1g0205371 23.506 502 321 16 1 472 1 469 3.77e-16 80.9
Msa1275090 MtrunA17_Chr2g0314721 28.571 238 143 8 260 492 281 496 4.05e-16 80.9
Msa1275090 MtrunA17_Chr1g0162811 23.108 489 315 16 6 467 12 466 4.15e-16 80.9
Msa1275090 MtrunA17_Chr7g0224561 23.877 423 273 15 73 465 63 466 5.90e-16 80.5
Msa1275090 MtrunA17_Chr1g0174431 27.962 211 138 5 285 495 1 197 6.42e-16 76.6
Msa1275090 MtrunA17_Chr5g0431511 28.054 221 131 6 259 471 272 472 6.49e-16 80.1
Msa1275090 MtrunA17_Chr4g0057001 21.457 494 329 14 29 490 42 508 6.53e-16 80.5
Msa1275090 MtrunA17_Chr8g0362481 25.681 257 159 8 247 495 195 427 7.38e-16 79.7
Msa1275090 MtrunA17_Chr3g0101601 23.203 487 321 14 6 467 5 463 7.46e-16 80.1
Msa1275090 MtrunA17_Chr1g0161651 24.756 307 177 8 13 271 17 317 7.85e-16 78.6
Msa1275090 MtrunA17_Chr1g0174471 26.531 245 144 7 259 489 292 514 8.23e-16 80.1
Msa1275090 MtrunA17_Chr7g0254641 22.689 476 299 15 33 467 33 480 9.74e-16 79.7
Msa1275090 MtrunA17_Chr8g0364651 23.387 496 321 17 1 467 1 466 4.50e-15 77.8
Msa1275090 MtrunA17_Chr4g0058201 24.065 428 264 13 73 467 59 458 4.53e-15 77.4
Msa1275090 MtrunA17_Chr4g0035921 26.471 204 129 3 266 467 295 479 7.57e-15 77.0
Msa1275090 MtrunA17_Chr5g0436991 30.769 143 94 4 175 316 18 156 9.53e-15 72.0
Msa1275090 MtrunA17_Chr5g0404871 40.000 110 47 3 233 324 7 115 1.04e-14 70.9
Msa1275090 MtrunA17_Chr5g0431501 28.182 220 130 6 260 471 273 472 1.10e-14 76.3
Msa1275090 MtrunA17_Chr5g0431461 28.182 220 130 6 260 471 273 472 1.10e-14 76.3
Msa1275090 MtrunA17_Chr8g0351801 27.350 234 133 5 256 472 276 489 3.33e-14 75.1
Msa1275090 MtrunA17_Chr8g0355961 22.899 476 304 15 28 471 32 476 3.81e-14 74.7
Msa1275090 MtrunA17_Chr4g0039901 21.893 507 300 18 36 495 34 491 5.32e-14 74.3
Msa1275090 MtrunA17_Chr3g0101611 22.555 501 306 16 9 467 9 469 7.14e-14 73.9
Msa1275090 MtrunA17_Chr1g0174461 26.009 223 138 6 236 450 253 456 8.73e-14 73.6
Msa1275090 MtrunA17_Chr1g0197871 28.311 219 130 7 260 472 269 466 1.28e-13 73.2
Msa1275090 MtrunA17_Chr4g0011961 25.455 220 140 4 261 474 267 468 1.62e-13 72.8
Msa1275090 MtrunA17_Chr8g0373431 42.188 64 36 1 429 491 1 64 2.71e-13 65.1
Msa1275090 MtrunA17_Chr5g0445451 26.977 215 132 6 260 467 270 466 3.07e-13 72.0
Msa1275090 MtrunA17_Chr4g0011981 26.636 214 133 5 260 467 267 462 3.32e-13 71.6
Msa1275090 MtrunA17_Chr4g0076161 26.459 257 167 7 217 467 229 469 4.88e-13 71.2
Msa1275090 MtrunA17_Chr7g0258221 25.893 224 142 6 272 489 293 498 6.24e-13 70.9
Msa1275090 MtrunA17_Chr8g0372251 26.906 223 130 5 240 447 247 451 1.00e-12 70.5
Msa1275090 MtrunA17_Chr4g0058211 26.943 193 122 4 276 467 10 184 1.04e-12 67.4
Msa1275090 MtrunA17_Chr7g0246151 23.396 265 166 7 241 494 255 493 1.16e-12 70.1
Msa1275090 MtrunA17_Chr3g0101571 20.325 492 340 13 1 467 1 465 1.36e-12 69.7
Msa1275090 MtrunA17_Chr4g0058231 26.636 214 133 5 260 467 272 467 1.42e-12 69.7
Msa1275090 MtrunA17_Chr8g0361471 23.887 247 163 5 228 467 239 467 1.63e-12 69.7
Msa1275090 MtrunA17_Chr1g0200951 25.439 228 146 8 260 480 300 510 1.68e-12 69.7
Msa1275090 MtrunA17_Chr3g0101581 21.475 461 305 14 36 467 36 468 1.96e-12 69.3
Msa1275090 MtrunA17_Chr4g0053621 23.779 307 175 9 174 467 203 463 2.01e-12 69.3
Msa1275090 MtrunA17_Chr1g0197851 27.397 219 132 7 260 472 269 466 2.08e-12 69.3
Msa1275090 MtrunA17_Chr4g0011921 21.807 509 309 16 1 467 1 462 2.51e-12 68.9
Msa1275090 MtrunA17_Chr7g0246221 22.244 499 319 18 4 467 5 469 2.80e-12 68.9
Msa1275090 MtrunA17_Chr7g0218611 26.201 229 140 6 251 471 263 470 2.83e-12 68.9
Msa1275090 MtrunA17_Chr4g0058261 23.556 225 153 4 272 495 319 525 3.19e-12 68.9
Msa1275090 MtrunA17_Chr1g0161641 32.979 94 45 2 373 466 13 88 3.31e-12 62.4
Msa1275090 MtrunA17_Chr8g0346261 25.822 213 138 6 259 467 317 513 3.71e-12 68.6
Msa1275090 MtrunA17_Chr7g0246121 26.104 249 151 9 256 495 268 492 3.84e-12 68.6
Msa1275090 MtrunA17_Chr7g0246181 24.088 274 168 8 236 495 247 494 4.23e-12 68.2
Msa1275090 MtrunA17_Chr6g0451811 28.042 189 103 7 282 459 2 168 5.71e-12 65.1
Msa1275090 MtrunA17_Chr1g0197891 27.397 219 132 7 260 472 269 466 5.79e-12 67.8
Msa1275090 MtrunA17_Chr1g0197881 27.397 219 132 7 260 472 268 465 6.27e-12 67.8
Msa1275090 MtrunA17_Chr4g0011851 24.468 188 119 5 283 467 14 181 7.72e-12 64.7
Msa1275090 MtrunA17_Chr1g0200961 26.070 257 163 7 219 467 226 463 1.11e-11 67.0
Msa1275090 MtrunA17_Chr4g0020041 25.532 235 144 8 243 467 255 468 1.36e-11 66.6
Msa1275090 MtrunA17_Chr1g0156081 26.389 216 131 6 260 467 306 501 1.43e-11 66.6
Msa1275090 MtrunA17_Chr1g0156061 24.766 214 137 4 260 467 238 433 1.68e-11 66.2
Msa1275090 MtrunA17_Chr6g0451781 25.000 348 201 16 152 459 193 520 2.32e-11 66.2
Msa1275090 MtrunA17_Chr3g0084921 23.140 242 155 4 242 472 261 482 2.34e-11 65.9
Msa1275090 MtrunA17_Chr8g0339331 27.111 225 138 7 260 476 285 491 3.03e-11 65.5
Msa1275090 MtrunA17_Chr6g0457421 21.145 454 297 15 71 495 88 509 3.27e-11 65.5
Msa1275090 MtrunA17_Chr4g0046631 23.307 502 316 21 1 459 7 482 3.49e-11 65.5
Msa1275090 MtrunA17_Chr6g0463561 30.769 143 88 4 1 139 6 141 5.03e-11 62.0
Msa1275090 MtrunA17_Chr5g0445531 23.093 472 280 18 36 467 37 465 5.55e-11 64.7
Msa1275090 MtrunA17_Chr5g0406651 23.767 223 146 5 251 467 259 463 8.27e-11 64.3
Msa1275090 MtrunA17_Chr3g0086691 23.506 251 161 8 256 495 268 498 8.47e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275090 AT3G13730.1 64.363 463 139 4 36 493 50 491 0.0 618
Msa1275090 AT3G13730.2 64.450 436 129 4 36 466 50 464 0.0 578
Msa1275090 AT4G36380.1 54.212 463 189 6 37 494 69 513 1.55e-180 516
Msa1275090 AT4G36380.2 50.549 364 164 5 37 395 69 421 5.69e-123 366
Msa1275090 AT5G05690.1 42.048 459 241 7 37 492 31 467 3.55e-121 363
Msa1275090 AT3G50660.1 35.451 488 280 7 32 493 34 512 8.16e-103 317
Msa1275090 AT1G73340.1 33.540 483 295 9 13 492 20 479 8.65e-98 304
Msa1275090 AT5G05690.2 40.970 371 214 4 37 407 31 396 3.51e-95 294
Msa1275090 AT5G38970.1 34.658 453 259 9 34 480 31 452 1.25e-88 279
Msa1275090 AT5G05690.3 40.541 370 195 7 126 492 1 348 4.84e-87 271
Msa1275090 AT3G30180.1 33.124 477 282 12 7 480 10 452 1.98e-83 266
Msa1275090 AT3G50660.2 34.663 401 234 5 32 407 34 431 2.01e-83 265
Msa1275090 AT3G19270.2 31.702 470 286 7 1 467 1 438 3.99e-79 254
Msa1275090 AT4G19230.1 31.325 498 299 14 1 492 1 461 7.12e-79 254
Msa1275090 AT1G12740.1 30.065 459 290 6 12 467 13 443 2.54e-78 253
Msa1275090 AT3G19270.1 31.489 470 287 7 1 467 1 438 2.90e-78 252
Msa1275090 AT4G19230.2 31.847 471 280 13 1 467 1 434 4.10e-77 250
Msa1275090 AT5G38970.3 34.127 378 236 5 34 409 31 397 1.29e-76 247
Msa1275090 AT1G12740.2 29.677 465 290 7 12 467 13 449 7.53e-76 246
Msa1275090 AT1G12740.4 29.677 465 290 7 12 467 13 449 8.83e-76 246
Msa1275090 AT5G45340.1 31.250 496 289 13 6 492 9 461 5.60e-75 244
Msa1275090 AT2G29090.2 30.670 463 290 7 32 490 44 479 4.95e-74 242
Msa1275090 AT2G29090.1 30.670 463 290 7 32 490 44 479 4.95e-74 242
Msa1275090 AT5G45340.2 31.624 468 270 12 6 466 9 433 6.43e-73 238
Msa1275090 AT5G14400.2 31.333 450 263 9 42 486 1 409 1.09e-71 234
Msa1275090 AT5G38970.2 33.586 396 231 8 91 480 2 371 5.12e-71 231
Msa1275090 AT5G38970.4 33.586 396 231 8 91 480 2 371 5.12e-71 231
Msa1275090 AT5G14400.3 31.163 430 251 8 42 467 1 389 1.78e-68 224
Msa1275090 AT4G15300.3 29.053 475 294 12 7 475 4 441 9.00e-68 225
Msa1275090 AT4G15300.2 29.053 475 294 12 7 475 14 451 9.73e-68 225
Msa1275090 AT3G44970.1 31.799 478 279 13 31 492 29 475 8.91e-67 223
Msa1275090 AT4G15300.1 28.138 494 296 13 7 475 4 463 1.96e-64 217
Msa1275090 AT5G36110.1 29.892 465 292 11 36 490 33 473 2.27e-63 214
Msa1275090 AT1G05160.2 29.759 457 287 8 18 466 31 461 6.73e-63 213
Msa1275090 AT1G05160.1 29.759 457 287 8 18 466 31 461 6.73e-63 213
Msa1275090 AT4G15396.1 28.721 477 298 14 5 473 8 450 1.86e-61 209
Msa1275090 AT4G15393.2 27.848 474 304 12 5 473 8 448 1.31e-60 206
Msa1275090 AT5G48000.2 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.4 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.7 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.6 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.5 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.3 29.122 467 302 9 31 490 29 473 1.88e-60 206
Msa1275090 AT5G48000.1 29.122 467 302 9 31 490 70 514 7.54e-60 205
Msa1275090 AT2G32440.2 30.493 446 273 9 32 466 39 458 8.54e-60 204
Msa1275090 AT2G32440.1 30.493 446 273 9 32 466 39 458 8.54e-60 204
Msa1275090 AT4G15396.3 28.817 465 290 13 5 461 8 439 9.66e-60 204
Msa1275090 AT1G65670.1 27.803 446 294 9 31 475 29 447 4.72e-59 202
Msa1275090 AT1G55940.1 28.315 445 289 10 31 465 39 463 6.87e-58 199
Msa1275090 AT1G55940.2 27.389 471 311 11 31 490 39 489 7.19e-58 200
Msa1275090 AT2G29090.3 28.889 405 261 6 90 490 3 384 4.60e-56 192
Msa1275090 AT1G12740.3 28.818 347 239 4 31 374 25 366 4.25e-55 189
Msa1275090 AT1G19630.1 26.069 491 329 10 12 492 8 474 1.48e-54 190
Msa1275090 AT1G78490.1 29.295 454 283 10 31 473 29 455 2.12e-53 187
Msa1275090 AT1G19630.3 25.486 463 314 8 12 467 8 446 7.06e-52 182
Msa1275090 AT5G14400.1 29.798 396 230 9 97 486 2 355 2.32e-51 179
Msa1275090 AT4G15396.2 27.463 477 283 15 5 473 8 429 2.34e-51 181
Msa1275090 AT5G14400.4 31.395 344 209 6 42 372 1 330 3.83e-51 177
Msa1275090 AT3G30290.1 28.571 406 258 10 75 475 3 381 4.02e-51 179
Msa1275090 AT4G15396.4 28.398 412 269 11 5 408 8 401 7.95e-51 178
Msa1275090 AT2G42850.1 27.071 495 317 12 4 482 10 476 1.07e-50 180
Msa1275090 AT4G15393.1 27.451 408 274 9 5 407 8 398 5.91e-50 176
Msa1275090 AT4G15310.1 26.626 492 306 13 1 475 1 454 4.21e-49 176
Msa1275090 AT1G19630.2 25.495 404 289 7 12 408 8 406 1.09e-44 162
Msa1275090 AT5G36110.2 29.345 351 239 6 36 381 33 379 2.03e-44 160
Msa1275090 AT1G78490.2 28.941 387 257 8 31 408 29 406 8.57e-44 160
Msa1275090 AT4G15393.3 25.000 408 251 9 5 407 8 365 1.41e-38 144
Msa1275090 AT2G29090.4 28.966 290 196 5 32 319 44 325 4.17e-37 140
Msa1275090 AT2G42850.2 27.062 388 264 9 4 381 10 388 6.41e-35 135
Msa1275090 AT5G36140.1 29.801 302 199 8 17 314 17 309 3.12e-33 129
Msa1275090 AT3G44970.2 28.446 341 214 10 31 356 29 354 5.68e-30 120
Msa1275090 AT5G36130.1 29.605 152 86 3 342 490 3 136 8.06e-19 83.6
Msa1275090 AT2G45550.1 30.556 216 122 7 259 467 279 473 1.31e-17 85.9
Msa1275090 AT2G45570.1 24.571 350 212 11 144 467 151 474 8.84e-17 83.6
Msa1275090 AT5G67310.1 23.142 471 312 15 29 476 34 477 1.19e-16 82.8
Msa1275090 AT5G04330.1 22.222 468 296 15 38 467 33 470 2.58e-16 82.0
Msa1275090 AT4G13770.1 22.996 474 299 16 30 467 22 465 3.57e-16 81.6
Msa1275090 AT1G50520.1 26.236 263 165 8 222 474 244 487 9.45e-16 80.1
Msa1275090 AT4G37430.1 27.660 282 169 8 197 467 204 461 1.08e-15 80.1
Msa1275090 AT1G33730.1 24.928 345 216 11 144 467 15 337 1.27e-15 79.0
Msa1275090 AT1G33730.2 24.928 345 216 11 144 467 15 337 1.27e-15 79.0
Msa1275090 AT1G01190.1 22.917 480 303 17 19 467 56 499 2.56e-15 79.0
Msa1275090 AT1G01190.2 22.917 480 303 17 19 467 61 504 2.69e-15 79.0
Msa1275090 AT2G45580.2 25.592 211 136 5 260 467 128 320 4.75e-15 77.0
Msa1275090 AT2G45580.1 25.592 211 136 5 260 467 282 474 6.65e-15 77.4
Msa1275090 AT2G14100.1 21.136 440 304 11 60 474 62 483 9.47e-15 77.0
Msa1275090 AT2G45560.1 28.512 242 144 9 236 467 251 473 9.93e-15 77.0
Msa1275090 AT4G37400.1 25.108 231 146 5 265 488 272 482 1.14e-14 76.6
Msa1275090 AT3G61880.1 27.600 250 155 9 230 472 272 502 5.81e-14 74.7
Msa1275090 AT1G50560.1 24.615 325 202 10 187 495 217 514 6.20e-14 74.7
Msa1275090 AT3G61880.2 27.984 243 149 9 237 472 279 502 7.89e-14 74.3
Msa1275090 AT1G33720.4 27.273 220 124 7 259 467 147 341 1.32e-13 72.8
Msa1275090 AT1G33720.3 27.273 220 124 7 259 467 147 341 1.32e-13 72.8
Msa1275090 AT1G33720.5 27.273 220 124 7 259 467 147 341 1.32e-13 72.8
Msa1275090 AT4G15360.1 24.583 240 149 5 243 474 266 481 1.45e-13 73.6
Msa1275090 AT3G26150.1 24.797 246 154 6 237 471 246 471 1.72e-13 73.2
Msa1275090 AT3G20940.1 21.245 466 317 12 37 474 42 485 2.48e-13 72.8
Msa1275090 AT1G33720.1 27.273 220 124 7 259 467 279 473 2.71e-13 72.4
Msa1275090 AT1G74540.1 22.458 236 160 4 235 467 239 454 2.84e-13 72.4
Msa1275090 AT3G28740.1 27.228 202 119 4 274 472 294 470 3.64e-13 72.0
Msa1275090 AT5G25120.1 21.298 493 325 18 3 467 2 459 4.41e-13 71.6
Msa1275090 AT3G26180.2 23.529 255 164 5 224 467 99 333 6.06e-13 70.9
Msa1275090 AT1G13080.2 24.242 231 151 4 247 473 145 355 6.65e-13 70.9
Msa1275090 AT3G26330.1 25.000 236 143 6 252 475 258 471 7.30e-13 71.2
Msa1275090 AT1G74550.1 25.000 204 122 5 271 467 269 448 7.59e-13 70.9
Msa1275090 AT1G13080.1 24.242 231 151 4 247 473 263 473 8.91e-13 70.9
Msa1275090 AT4G37410.1 26.502 283 171 9 197 467 201 458 1.48e-12 70.1
Msa1275090 AT3G26230.1 27.027 222 137 5 260 472 266 471 1.53e-12 70.1
Msa1275090 AT4G37370.1 24.775 222 135 5 273 488 284 479 1.97e-12 69.7
Msa1275090 AT3G26180.1 23.554 242 154 5 237 467 246 467 1.99e-12 69.7
Msa1275090 AT5G25130.1 27.094 203 125 4 272 471 281 463 2.00e-12 69.7
Msa1275090 AT3G26170.1 23.140 242 155 5 237 467 246 467 2.76e-12 69.3
Msa1275090 AT4G37320.1 23.860 285 178 9 194 467 201 457 3.02e-12 69.3
Msa1275090 AT3G26160.1 25.333 225 137 6 237 450 246 450 3.32e-12 68.9
Msa1275090 AT1G33720.2 27.225 191 108 5 284 467 200 366 5.48e-12 68.2
Msa1275090 AT3G26280.2 25.822 213 141 3 260 471 294 490 6.49e-12 68.2
Msa1275090 AT3G26280.1 25.822 213 141 3 260 471 277 473 6.98e-12 68.2
Msa1275090 AT5G42580.1 24.771 218 138 5 259 467 262 462 7.41e-12 67.8
Msa1275090 AT5G57220.1 25.446 224 134 6 268 484 275 472 7.55e-12 67.8
Msa1275090 AT2G30770.1 25.207 242 147 6 238 470 249 465 9.36e-12 67.8
Msa1275090 AT2G30750.1 26.950 282 175 10 202 470 202 465 1.21e-11 67.4
Msa1275090 AT4G37330.1 27.273 198 114 4 274 467 283 454 1.26e-11 67.4
Msa1275090 AT3G26310.1 25.652 230 141 6 252 471 257 466 1.66e-11 67.0
Msa1275090 AT3G20950.1 20.706 425 286 13 73 467 78 481 1.91e-11 66.6
Msa1275090 AT1G64940.1 21.713 502 326 14 5 467 4 477 2.65e-11 66.2
Msa1275090 AT5G06905.1 22.308 390 261 10 103 479 132 492 3.27e-11 65.9
Msa1275090 AT4G37340.1 24.561 228 135 6 249 467 258 457 3.50e-11 65.9
Msa1275090 AT1G64930.1 23.394 218 152 4 261 477 284 487 6.78e-11 65.1
Msa1275090 AT4G37310.1 25.368 272 173 9 230 490 243 495 9.42e-11 64.7

Find 106 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAGTCTCAACAGTTAA+AGG 0.116557 8_3:+8942612 Msa1275090:CDS
TTAAAAGATGTTGAAATAAA+AGG 0.209663 8_3:+8944807 Msa1275090:CDS
AGAACTGGCTTCATACTTTA+TGG 0.213426 8_3:-8946049 None:intergenic
CTCCATGGATTGAATTGATA+TGG 0.216450 8_3:-8944906 None:intergenic
GGAAGCTGATTTCTTTGTTT+TGG 0.231103 8_3:-8942025 None:intergenic
AGAATGGGAAATATTATAAA+TGG 0.257989 8_3:+8944768 Msa1275090:CDS
GTGTTCAAGTCACACATATT+TGG 0.262281 8_3:+8942415 Msa1275090:CDS
AGTTACAATTTCACTCCTTT+TGG 0.263418 8_3:+8945249 Msa1275090:CDS
TTGGTTCCTGGTAGGTTTAT+TGG 0.281130 8_3:-8943578 None:intergenic
TACAAGAATCAATGGCAAAT+TGG 0.299562 8_3:+8942665 Msa1275090:CDS
TCTATGGTTTCGCCAATAAA+AGG 0.301450 8_3:-8942067 None:intergenic
CAAGTCATTGATGCAGTTAA+TGG 0.306667 8_3:+8942522 Msa1275090:CDS
ATCAAAGTGCACAAGAAAAT+TGG 0.311890 8_3:-8941965 None:intergenic
CAAACTCTATCAATCTTTAC+AGG 0.316083 8_3:+8943598 Msa1275090:CDS
GGTTAAGGCATTGATTAGTT+TGG 0.319612 8_3:+8943487 Msa1275090:CDS
CACACTTTCTATGCTAGCTT+TGG 0.329630 8_3:-8941902 None:intergenic
AGAAGAATACATGGACTTAT+TGG 0.330766 8_3:+8942583 Msa1275090:CDS
GTTTCATCTTGTATGTATAT+AGG 0.334907 8_3:-8942700 None:intergenic
CGCTTGGTCATGAAGCTCTC+AGG 0.340723 8_3:-8942118 None:intergenic
CCAGATTGCCTTTCATGTAT+TGG 0.344235 8_3:+8943466 Msa1275090:intron
CTGTAAAGATTGATAGAGTT+TGG 0.351134 8_3:-8943597 None:intergenic
GTCCAAGCTAAAAGAAATAA+AGG 0.355190 8_3:+8943741 Msa1275090:CDS
ATCTGCATCTGTTGAAACTA+TGG 0.355994 8_3:-8942446 None:intergenic
TGCCTTTCATGTATTGGTTA+AGG 0.360416 8_3:+8943472 Msa1275090:CDS
ATTATTGATATGATGATTCC+TGG 0.361769 8_3:+8943849 Msa1275090:CDS
TTTGAAGGACCCCGTCAATT+AGG 0.364892 8_3:+8946245 Msa1275090:three_prime_UTR
GGTTTATTGGCAAAGACATT+AGG 0.365137 8_3:-8943565 None:intergenic
ATCACCTTGTTACTCAATTC+AGG 0.370018 8_3:+8945334 Msa1275090:CDS
CAGCTTCCACTAGGCACTCT+TGG 0.371339 8_3:+8942040 Msa1275090:CDS
TGCATGCAGTTAGCCACGTT+TGG 0.372924 8_3:+8945016 Msa1275090:intron
AGCACAAGAAACAAAATCTA+TGG 0.379663 8_3:-8942083 None:intergenic
AGAAACTCAAAGATCAGCTT+GGG 0.397691 8_3:+8944594 Msa1275090:CDS
TTTGGAACCAGGTGAAGAAA+TGG 0.404338 8_3:+8943505 Msa1275090:CDS
GTAGCTAGAGTCATAAGAAC+TGG 0.424472 8_3:-8943885 None:intergenic
AATCACTGAAACTTTGAGAA+TGG 0.438534 8_3:+8944752 Msa1275090:CDS
CTGCTATGCTAGGGAAGAAA+AGG 0.439549 8_3:+8946303 Msa1275090:three_prime_UTR
GATTGATAGAGTTTGGTTCC+TGG 0.441738 8_3:-8943590 None:intergenic
AACTTACATGGCGCATCGCT+TGG 0.445087 8_3:-8942134 None:intergenic
GGCTTCATACTTTATGGCTA+AGG 0.447525 8_3:-8946043 None:intergenic
AGCACATCCACTACATCTCT+TGG 0.448392 8_3:-8943777 None:intergenic
TCCACTCTCCTTACTAAGAT+AGG 0.450094 8_3:-8946019 None:intergenic
TCTTGCTTTACAACAATTGA+CGG 0.452785 8_3:+8943929 Msa1275090:CDS
TGGTCTTGACTTGGCAAGGT+TGG 0.454804 8_3:+8945293 Msa1275090:CDS
AAGTCATTGATGCAGTTAAT+GGG 0.454826 8_3:+8942523 Msa1275090:CDS
ATCACTGAAACTTTGAGAAT+GGG 0.459694 8_3:+8944753 Msa1275090:CDS
CATCTTGTATGTATATAGGT+TGG 0.463350 8_3:-8942696 None:intergenic
TAAAAGATGTTGAAATAAAA+GGG 0.464767 8_3:+8944808 Msa1275090:CDS
CATTAACTGCATCAATGACT+TGG 0.471779 8_3:-8942521 None:intergenic
AAAAGGATAAATGGAGGGCC+AGG 0.474075 8_3:+8946122 Msa1275090:three_prime_UTR
AAAGTAAATACCTAATTGAC+GGG 0.480645 8_3:-8946255 None:intergenic
GAAGTATGTACAAGAATCAA+TGG 0.481343 8_3:+8942657 Msa1275090:CDS
TATAAATGGTGTTATGAGAA+AGG 0.482339 8_3:+8944782 Msa1275090:CDS
TCTCTTACTTGCCACCTCCA+TGG 0.484674 8_3:-8944921 None:intergenic
ACTGTATGAGTATGTAGAAC+TGG 0.484729 8_3:-8946064 None:intergenic
AGAAGTTCCATTTCTTCACC+TGG 0.485238 8_3:-8943512 None:intergenic
ACTGGAACTGAGTCCTCTCC+AGG 0.491202 8_3:-8943867 None:intergenic
AAGCAAGAGGACATTCTGAT+AGG 0.492799 8_3:-8943914 None:intergenic
AAGAAACTCAAAGATCAGCT+TGG 0.502068 8_3:+8944593 Msa1275090:CDS
CCACAGTAAGAATGAAAAGA+AGG 0.505274 8_3:+8945993 Msa1275090:CDS
ATCAATGACTTGGGATAAGA+AGG 0.505590 8_3:-8942511 None:intergenic
GCAAATCTCGATTTCAAGCT+CGG 0.507917 8_3:+8945057 Msa1275090:CDS
GAAGGATGCCTATCTTAGTA+AGG 0.508620 8_3:+8946011 Msa1275090:CDS
TTCCACTAGGCACTCTTGGA+TGG 0.509240 8_3:+8942044 Msa1275090:CDS
AAAAGTAAATACCTAATTGA+CGG 0.515279 8_3:-8946256 None:intergenic
TCCATGTATTCTTCTTTGCA+AGG 0.516199 8_3:-8942575 None:intergenic
TCCATGGATTGAATTGATAT+GGG 0.517615 8_3:-8944905 None:intergenic
GTCCTGGTCTTGACTTGGCA+AGG 0.519158 8_3:+8945289 Msa1275090:CDS
AGCCTTTGTCCTCCTCCAAA+AGG 0.520707 8_3:-8945264 None:intergenic
AACAAGGTGATGCAGAAAGA+TGG 0.521247 8_3:-8945322 None:intergenic
GGAGGACAAAGGCTGTGTCC+TGG 0.527656 8_3:+8945273 Msa1275090:CDS
GCATCTGTTGAAACTATGGT+AGG 0.528354 8_3:-8942442 None:intergenic
GCCCATATCAATTCAATCCA+TGG 0.528496 8_3:+8944904 Msa1275090:CDS
TATACTACAAAGTGATGCAA+AGG 0.530469 8_3:+8942480 Msa1275090:CDS
ATCAATGGCAAATTGGAAAG+AGG 0.541562 8_3:+8942672 Msa1275090:CDS
GATAGAGTTTGGTTCCTGGT+AGG 0.545482 8_3:-8943586 None:intergenic
CATGAAGCTCTCAGGGCGGT+CGG 0.547597 8_3:-8942110 None:intergenic
CAAAGAAATCAGCTTCCACT+AGG 0.548481 8_3:+8942031 Msa1275090:CDS
TGAAGTTCCAAGAGATGTAG+TGG 0.566054 8_3:+8943770 Msa1275090:CDS
AACTCAAAGATCAGCTTGGG+GGG 0.566190 8_3:+8944597 Msa1275090:CDS
ACCTTGCAAAGAAGAATACA+TGG 0.567029 8_3:+8942574 Msa1275090:CDS
GCTTGGTCATGAAGCTCTCA+GGG 0.568089 8_3:-8942117 None:intergenic
TGCCTTAACCAATACATGAA+AGG 0.571314 8_3:-8943474 None:intergenic
ATCAATTCAATCCATGGAGG+TGG 0.577242 8_3:+8944910 Msa1275090:CDS
ATTAACTGCATCAATGACTT+GGG 0.584123 8_3:-8942520 None:intergenic
GTCAATTGTTGTAAAGCAAG+AGG 0.589441 8_3:-8943927 None:intergenic
GCATTGATTAGTTTGGAACC+AGG 0.594460 8_3:+8943494 Msa1275090:CDS
TGATATGATGATTCCTGGAG+AGG 0.598999 8_3:+8943854 Msa1275090:CDS
GGTATTTAATACCACAAGGA+TGG 0.600127 8_3:+8944829 Msa1275090:CDS
GCCTATCTTAGTAAGGAGAG+TGG 0.601179 8_3:+8946018 Msa1275090:CDS
CATCTGTTGAAACTATGGTA+GGG 0.601336 8_3:-8942441 None:intergenic
GCTGTGTCCTGGTCTTGACT+TGG 0.602444 8_3:+8945284 Msa1275090:CDS
AACCTTGCCAAGTCAAGACC+AGG 0.613082 8_3:-8945291 None:intergenic
TACATACTTCTGCATATCTG+AGG 0.627594 8_3:-8942644 None:intergenic
GCAAACACACACCATCCTTG+TGG 0.629982 8_3:-8944840 None:intergenic
TTGATCAGACGGTCCAAACG+TGG 0.632627 8_3:-8945029 None:intergenic
GGCCATCCAAGAGTGCCTAG+TGG 0.645890 8_3:-8942046 None:intergenic
AAACTCAAAGATCAGCTTGG+GGG 0.657592 8_3:+8944596 Msa1275090:CDS
AAGTAATCATTCCAACACAA+AGG 0.660680 8_3:-8944620 None:intergenic
TCTTTGCCAATAAACCTACC+AGG 0.667808 8_3:+8943572 Msa1275090:CDS
ATTACCTGAATTGAGTAACA+AGG 0.672107 8_3:-8945338 None:intergenic
GAAACTCAAAGATCAGCTTG+GGG 0.674346 8_3:+8944595 Msa1275090:CDS
GGCTAATGTAGACACACGTG+TGG 0.683236 8_3:+8946152 Msa1275090:three_prime_UTR
AAAGGGTATTTAATACCACA+AGG 0.700611 8_3:+8944825 Msa1275090:CDS
CATATCAATTCAATCCATGG+AGG 0.719309 8_3:+8944907 Msa1275090:CDS
TGGTCATGAAGCTCTCAGGG+CGG 0.723334 8_3:-8942114 None:intergenic
AAGTAAATACCTAATTGACG+GGG 0.738330 8_3:-8946254 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATATATTTGGCAAT+TGG + chr8_3:8942938-8942957 Msa1275090:intron 15.0%
!! TATATCTTAGTTATCTTTAT+AGG + chr8_3:8943303-8943322 Msa1275090:intron 15.0%
!! ATATCTTAGTTATCTTTATA+GGG + chr8_3:8943304-8943323 Msa1275090:intron 15.0%
!! ATATGTATATTTGAAAATCA+TGG + chr8_3:8943998-8944017 Msa1275090:intron 15.0%
!! AATAAGTCAGTATAAAATTA+TGG - chr8_3:8944711-8944730 None:intergenic 15.0%
!!! TTTTATTTCAACATCTTTTA+AGG - chr8_3:8944808-8944827 None:intergenic 15.0%
!! TTAAAAGATGTTGAAATAAA+AGG + chr8_3:8944807-8944826 Msa1275090:CDS 15.0%
!! TAAAAGATGTTGAAATAAAA+GGG + chr8_3:8944808-8944827 Msa1275090:CDS 15.0%
!! AAAATTAACTATAAAGAAAC+TGG - chr8_3:8945167-8945186 None:intergenic 15.0%
!! AATAGGTTAATTAATGTAAT+GGG + chr8_3:8945201-8945220 Msa1275090:intron 15.0%
!! AAATATTAGAGTTCAAACTT+TGG - chr8_3:8942836-8942855 None:intergenic 20.0%
!!! CCAAATATATATTTTAGAGA+AGG - chr8_3:8942934-8942953 None:intergenic 20.0%
!!! CCTTCTCTAAAATATATATT+TGG + chr8_3:8942931-8942950 Msa1275090:intron 20.0%
!! TGAGTTGTAAAAGTAATAAT+TGG + chr8_3:8943057-8943076 Msa1275090:intron 20.0%
!! TGTTTGTAGAAATTAATTGT+TGG - chr8_3:8943409-8943428 None:intergenic 20.0%
!!! ACTTCTAAAAAAACATTTTC+AGG + chr8_3:8943529-8943548 Msa1275090:CDS 20.0%
!! TAATTTGACTACAATATAGA+AGG - chr8_3:8944121-8944140 None:intergenic 20.0%
!!! TGTTATTTTAACTTTAGACT+AGG - chr8_3:8944189-8944208 None:intergenic 20.0%
!!! AATTTTTCCTTAGACAAAAT+TGG + chr8_3:8944289-8944308 Msa1275090:intron 20.0%
!! ATAGTCATATATGTATAGAA+AGG - chr8_3:8944335-8944354 None:intergenic 20.0%
!! TATGACTATAAACATTCAAA+AGG + chr8_3:8944346-8944365 Msa1275090:intron 20.0%
!! ATGACTATAAACATTCAAAA+GGG + chr8_3:8944347-8944366 Msa1275090:intron 20.0%
!!! TAAATAATTGAAAGTTCTAG+TGG + chr8_3:8944403-8944422 Msa1275090:intron 20.0%
!! TTGAGATTATTCAAAAACTT+TGG - chr8_3:8944460-8944479 None:intergenic 20.0%
!!! AAGTTTTTGAATAATCTCAA+TGG + chr8_3:8944460-8944479 Msa1275090:intron 20.0%
!! CCAAAAGCTAATTAAAAAAT+CGG - chr8_3:8944531-8944550 None:intergenic 20.0%
!! AGAATGGGAAATATTATAAA+TGG + chr8_3:8944768-8944787 Msa1275090:CDS 20.0%
!! GAATAGGTTAATTAATGTAA+TGG + chr8_3:8945200-8945219 Msa1275090:intron 20.0%
!! ATAGGTTAATTAATGTAATG+GGG + chr8_3:8945202-8945221 Msa1275090:intron 20.0%
!! CAAAATTATTACATAAGAGA+AGG + chr8_3:8945412-8945431 Msa1275090:intron 20.0%
!! ATACACAAGCAAAATAAAAA+AGG + chr8_3:8946105-8946124 Msa1275090:three_prime_UTR 20.0%
!! GCAAAATAAAAAAGGATAAA+TGG + chr8_3:8946113-8946132 Msa1275090:three_prime_UTR 20.0%
!! AAATAAAAAAGGATAAATGG+AGG + chr8_3:8946116-8946135 Msa1275090:three_prime_UTR 20.0%
!! AATAAAAAAGGATAAATGGA+GGG + chr8_3:8946117-8946136 Msa1275090:three_prime_UTR 20.0%
!! AAAAGTAAATACCTAATTGA+CGG - chr8_3:8946259-8946278 None:intergenic 20.0%
! TTTAACTCACTTTCATTCAT+AGG + chr8_3:8942183-8942202 Msa1275090:intron 25.0%
!!! AAGATTGTTTGTTTTTGACA+AGG + chr8_3:8942351-8942370 Msa1275090:intron 25.0%
! GTTTCATCTTGTATGTATAT+AGG - chr8_3:8942703-8942722 None:intergenic 25.0%
! CATACAAGATGAAACAAAAA+AGG + chr8_3:8942708-8942727 Msa1275090:CDS 25.0%
!! ATATTTTACCTTCAATCTCA+TGG + chr8_3:8942850-8942869 Msa1275090:intron 25.0%
! AACAACTTGAACATAGAAAA+AGG - chr8_3:8942969-8942988 None:intergenic 25.0%
!! TTTGTCACATGATTTTTGAA+TGG - chr8_3:8943005-8943024 None:intergenic 25.0%
! TGATCAAATTATCTATCTAG+CGG + chr8_3:8943080-8943099 Msa1275090:intron 25.0%
! GTTTAGATTAGGGATAAATT+TGG + chr8_3:8943108-8943127 Msa1275090:intron 25.0%
! ATATCATGTTGAAACAAAGT+TGG - chr8_3:8943256-8943275 None:intergenic 25.0%
! AAGAAGAAGTGATTAATTGT+TGG - chr8_3:8943438-8943457 None:intergenic 25.0%
! ATTATTGATATGATGATTCC+TGG + chr8_3:8943849-8943868 Msa1275090:CDS 25.0%
! GATGGTTAATAAAAATGACT+AGG - chr8_3:8944061-8944080 None:intergenic 25.0%
! GATTAATTATGTTCAGAAGA+TGG - chr8_3:8944079-8944098 None:intergenic 25.0%
! ACAGATGAAAAGAAACATAA+TGG - chr8_3:8944256-8944275 None:intergenic 25.0%
! ATTCAAAAACTTTGGTGAAT+GGG - chr8_3:8944452-8944471 None:intergenic 25.0%
! TATTCAAAAACTTTGGTGAA+TGG - chr8_3:8944453-8944472 None:intergenic 25.0%
! TTGAATAATCTCAATGGTTA+TGG + chr8_3:8944466-8944485 Msa1275090:intron 25.0%
!! CTAATTAAAAAATCGGTTCA+AGG - chr8_3:8944524-8944543 None:intergenic 25.0%
!!! CCGATTTTTTAATTAGCTTT+TGG + chr8_3:8944528-8944547 Msa1275090:intron 25.0%
!!! ACTTTTGTTTGTGTTTGATA+AGG - chr8_3:8944685-8944704 None:intergenic 25.0%
! ATTATATGCCTAACTTATAC+AGG + chr8_3:8944728-8944747 Msa1275090:intron 25.0%
!!! TATAAATGGTGTTATGAGAA+AGG + chr8_3:8944782-8944801 Msa1275090:CDS 25.0%
! AGATCTTGGTATAGTTTATA+TGG + chr8_3:8944961-8944980 Msa1275090:intron 25.0%
!!! ATTTGCTTATTTTGATCAGA+CGG - chr8_3:8945043-8945062 None:intergenic 25.0%
! TTTCATGTTACTACATGAAT+AGG + chr8_3:8945184-8945203 Msa1275090:intron 25.0%
! TAGGTTAATTAATGTAATGG+GGG + chr8_3:8945203-8945222 Msa1275090:intron 25.0%
! ATGTTATATTGCTCAAACTT+AGG + chr8_3:8945381-8945400 Msa1275090:intron 25.0%
! TGAAAATAGAAAATCATGAG+TGG - chr8_3:8945505-8945524 None:intergenic 25.0%
! TTCAAACTAAATTGAGTAGA+AGG + chr8_3:8945521-8945540 Msa1275090:intron 25.0%
! TAATTGCATATGGACAAATA+TGG + chr8_3:8945602-8945621 Msa1275090:intron 25.0%
! ACTGTTTACACTATACAATA+AGG + chr8_3:8945763-8945782 Msa1275090:intron 25.0%
!! TAGAAAAAGTTGTCTTTTGA+AGG + chr8_3:8946230-8946249 Msa1275090:three_prime_UTR 25.0%
! AAAGTAAATACCTAATTGAC+GGG - chr8_3:8946258-8946277 None:intergenic 25.0%
! GAAAGTGTGAGAAAAAACAA+TGG + chr8_3:8941916-8941935 Msa1275090:exon 30.0%
AAAAAACAATGGACACTACT+TGG + chr8_3:8941927-8941946 Msa1275090:exon 30.0%
AAAAACAATGGACACTACTT+GGG + chr8_3:8941928-8941947 Msa1275090:exon 30.0%
ATCAAAGTGCACAAGAAAAT+TGG - chr8_3:8941968-8941987 None:intergenic 30.0%
AGCACAAGAAACAAAATCTA+TGG - chr8_3:8942086-8942105 None:intergenic 30.0%
! TGTATGATGATGAACTTACA+TGG - chr8_3:8942149-8942168 None:intergenic 30.0%
CAAAAACAAACAATCTTGCA+CGG - chr8_3:8942348-8942367 None:intergenic 30.0%
!!! TTGTTTTTGACAAGGATTTG+TGG + chr8_3:8942359-8942378 Msa1275090:intron 30.0%
TATACTACAAAGTGATGCAA+AGG + chr8_3:8942480-8942499 Msa1275090:CDS 30.0%
ATTAACTGCATCAATGACTT+GGG - chr8_3:8942523-8942542 None:intergenic 30.0%
AAGTCATTGATGCAGTTAAT+GGG + chr8_3:8942523-8942542 Msa1275090:CDS 30.0%
! TCTTCTATTTTGCTCATCAA+TGG + chr8_3:8942550-8942569 Msa1275090:CDS 30.0%
AGAAGAATACATGGACTTAT+TGG + chr8_3:8942583-8942602 Msa1275090:CDS 30.0%
GAAGTATGTACAAGAATCAA+TGG + chr8_3:8942657-8942676 Msa1275090:CDS 30.0%
TACAAGAATCAATGGCAAAT+TGG + chr8_3:8942665-8942684 Msa1275090:CDS 30.0%
CATCTTGTATGTATATAGGT+TGG - chr8_3:8942699-8942718 None:intergenic 30.0%
TTTATCTTGTGTCAGTTGAA+TGG - chr8_3:8942895-8942914 None:intergenic 30.0%
CTCATGCAAAAACTTAAGTA+GGG - chr8_3:8943041-8943060 None:intergenic 30.0%
ACTCATGCAAAAACTTAAGT+AGG - chr8_3:8943042-8943061 None:intergenic 30.0%
TAGGGTTCATAATCATTTAC+AGG + chr8_3:8943322-8943341 Msa1275090:intron 30.0%
AACCATGCTGCATTAAAAAA+AGG + chr8_3:8943345-8943364 Msa1275090:intron 30.0%
AATTGTTGGAGTTAGTATCT+TGG - chr8_3:8943395-8943414 None:intergenic 30.0%
!! CATTTTCAGGAATTTATCTC+TGG + chr8_3:8943542-8943561 Msa1275090:CDS 30.0%
CTGTAAAGATTGATAGAGTT+TGG - chr8_3:8943600-8943619 None:intergenic 30.0%
CAAACTCTATCAATCTTTAC+AGG + chr8_3:8943598-8943617 Msa1275090:CDS 30.0%
AGTAATGATGACTTCACATT+TGG + chr8_3:8943676-8943695 Msa1275090:intron 30.0%
GTTTCAGGCAAAAAAGAAAA+TGG + chr8_3:8943698-8943717 Msa1275090:intron 30.0%
GTCCAAGCTAAAAGAAATAA+AGG + chr8_3:8943741-8943760 Msa1275090:CDS 30.0%
!! TGCCTTTATTTCTTTTAGCT+TGG - chr8_3:8943746-8943765 None:intergenic 30.0%
TCTTGCTTTACAACAATTGA+CGG + chr8_3:8943929-8943948 Msa1275090:CDS 30.0%
TCATGGTTAATAGTGTTTAG+CGG + chr8_3:8944015-8944034 Msa1275090:intron 30.0%
!!! CGGTTCAAGGAATTTTTTAA+GGG - chr8_3:8944511-8944530 None:intergenic 30.0%
!!! TCGGTTCAAGGAATTTTTTA+AGG - chr8_3:8944512-8944531 None:intergenic 30.0%
AAGTAATCATTCCAACACAA+AGG - chr8_3:8944623-8944642 None:intergenic 30.0%
!!! TGGCTTACTTTTTGAGTAAA+TGG - chr8_3:8944653-8944672 None:intergenic 30.0%
AGTGATTACCTGTATAAGTT+AGG - chr8_3:8944739-8944758 None:intergenic 30.0%
! AATCACTGAAACTTTGAGAA+TGG + chr8_3:8944752-8944771 Msa1275090:CDS 30.0%
! ATCACTGAAACTTTGAGAAT+GGG + chr8_3:8944753-8944772 Msa1275090:CDS 30.0%
!! AAAGGGTATTTAATACCACA+AGG + chr8_3:8944825-8944844 Msa1275090:CDS 30.0%
! TCCATGGATTGAATTGATAT+GGG - chr8_3:8944908-8944927 None:intergenic 30.0%
GGTATAGTTTATATGGATCT+AGG + chr8_3:8944968-8944987 Msa1275090:intron 30.0%
! AGGTTAATTAATGTAATGGG+GGG + chr8_3:8945204-8945223 Msa1275090:intron 30.0%
! AGTTACAATTTCACTCCTTT+TGG + chr8_3:8945249-8945268 Msa1275090:CDS 30.0%
ATTACCTGAATTGAGTAACA+AGG - chr8_3:8945341-8945360 None:intergenic 30.0%
TTGCTCTTATTCTATCTACT+TGG - chr8_3:8945569-8945588 None:intergenic 30.0%
TGTCTCTTTCTAATTGCATA+TGG + chr8_3:8945592-8945611 Msa1275090:intron 30.0%
! TGCAGCATTTAAAGTCTTTA+TGG - chr8_3:8945654-8945673 None:intergenic 30.0%
ACAATCTTACAACAAAGGTT+AGG - chr8_3:8945702-8945721 None:intergenic 30.0%
AACACACAATCTTACAACAA+AGG - chr8_3:8945707-8945726 None:intergenic 30.0%
TGTAAGATTGTGTGTTTCAT+TGG + chr8_3:8945711-8945730 Msa1275090:intron 30.0%
! TATTCAAGTTCAGAGATGTT+AGG - chr8_3:8945844-8945863 None:intergenic 30.0%
TTTAATGTTTCACATGCAGA+TGG + chr8_3:8945939-8945958 Msa1275090:intron 30.0%
! TTCTTTTCATTCTTACTGTG+GGG - chr8_3:8945994-8946013 None:intergenic 30.0%
! CTTCTTTTCATTCTTACTGT+GGG - chr8_3:8945995-8946014 None:intergenic 30.0%
AAGTAAATACCTAATTGACG+GGG - chr8_3:8946257-8946276 None:intergenic 30.0%
!! GGAAGCTGATTTCTTTGTTT+TGG - chr8_3:8942028-8942047 None:intergenic 35.0%
TCTATGGTTTCGCCAATAAA+AGG - chr8_3:8942070-8942089 None:intergenic 35.0%
! ATTTTACAACTCTCTCTGAG+GGG - chr8_3:8942289-8942308 None:intergenic 35.0%
! CATTTTACAACTCTCTCTGA+GGG - chr8_3:8942290-8942309 None:intergenic 35.0%
GTGTTCAAGTCACACATATT+TGG + chr8_3:8942415-8942434 Msa1275090:CDS 35.0%
CATCTGTTGAAACTATGGTA+GGG - chr8_3:8942444-8942463 None:intergenic 35.0%
ATCTGCATCTGTTGAAACTA+TGG - chr8_3:8942449-8942468 None:intergenic 35.0%
! ATCAATGACTTGGGATAAGA+AGG - chr8_3:8942514-8942533 None:intergenic 35.0%
CATTAACTGCATCAATGACT+TGG - chr8_3:8942524-8942543 None:intergenic 35.0%
CAAGTCATTGATGCAGTTAA+TGG + chr8_3:8942522-8942541 Msa1275090:CDS 35.0%
ACCTTGCAAAGAAGAATACA+TGG + chr8_3:8942574-8942593 Msa1275090:CDS 35.0%
TCCATGTATTCTTCTTTGCA+AGG - chr8_3:8942578-8942597 None:intergenic 35.0%
CTTCAAGTCTCAACAGTTAA+AGG + chr8_3:8942612-8942631 Msa1275090:CDS 35.0%
TACATACTTCTGCATATCTG+AGG - chr8_3:8942647-8942666 None:intergenic 35.0%
ATCAATGGCAAATTGGAAAG+AGG + chr8_3:8942672-8942691 Msa1275090:CDS 35.0%
AGAGAGAAGCAAACAAAGAT+AGG - chr8_3:8942784-8942803 None:intergenic 35.0%
AAACTTAAGTAGGGAAAGGA+AGG - chr8_3:8943032-8943051 None:intergenic 35.0%
GCAAAAACTTAAGTAGGGAA+AGG - chr8_3:8943036-8943055 None:intergenic 35.0%
TAGCGGTGAATGTTTAGATT+AGG + chr8_3:8943097-8943116 Msa1275090:intron 35.0%
AGCGGTGAATGTTTAGATTA+GGG + chr8_3:8943098-8943117 Msa1275090:intron 35.0%
GGATAAATTTGGCACAATCA+CGG + chr8_3:8943119-8943138 Msa1275090:intron 35.0%
!!! CTCCTTTTTTTAATGCAGCA+TGG - chr8_3:8943350-8943369 None:intergenic 35.0%
GGAGTTAGTATCTTGGAAAA+TGG - chr8_3:8943388-8943407 None:intergenic 35.0%
AATACATGAAAGGCAATCTG+GGG - chr8_3:8943467-8943486 None:intergenic 35.0%
CAATACATGAAAGGCAATCT+GGG - chr8_3:8943468-8943487 None:intergenic 35.0%
!! TGCCTTTCATGTATTGGTTA+AGG + chr8_3:8943472-8943491 Msa1275090:CDS 35.0%
TGCCTTAACCAATACATGAA+AGG - chr8_3:8943477-8943496 None:intergenic 35.0%
!! GGTTAAGGCATTGATTAGTT+TGG + chr8_3:8943487-8943506 Msa1275090:CDS 35.0%
GGTTTATTGGCAAAGACATT+AGG - chr8_3:8943568-8943587 None:intergenic 35.0%
! ATGACTTCACATTTGGTTTC+AGG + chr8_3:8943683-8943702 Msa1275090:intron 35.0%
GTCAATTGTTGTAAAGCAAG+AGG - chr8_3:8943930-8943949 None:intergenic 35.0%
TAACTTTAGACTAGGCCATT+AGG - chr8_3:8944181-8944200 None:intergenic 35.0%
!! AGCTTTTGGTAACTGAACTT+TGG + chr8_3:8944542-8944561 Msa1275090:intron 35.0%
AAGAAACTCAAAGATCAGCT+TGG + chr8_3:8944593-8944612 Msa1275090:CDS 35.0%
AGAAACTCAAAGATCAGCTT+GGG + chr8_3:8944594-8944613 Msa1275090:CDS 35.0%
GGTATTTAATACCACAAGGA+TGG + chr8_3:8944829-8944848 Msa1275090:CDS 35.0%
! CTCCATGGATTGAATTGATA+TGG - chr8_3:8944909-8944928 None:intergenic 35.0%
CATATCAATTCAATCCATGG+AGG + chr8_3:8944907-8944926 Msa1275090:CDS 35.0%
! TACCAAGATCTAAAGTGTAG+CGG - chr8_3:8944952-8944971 None:intergenic 35.0%
ATCGTCTAATCAAGATCGAA+CGG - chr8_3:8945128-8945147 None:intergenic 35.0%
! TACAATTTCACTCCTTTTGG+AGG + chr8_3:8945252-8945271 Msa1275090:CDS 35.0%
ATCACCTTGTTACTCAATTC+AGG + chr8_3:8945334-8945353 Msa1275090:CDS 35.0%
TCTATCTACTTGGACACATA+TGG - chr8_3:8945559-8945578 None:intergenic 35.0%
AATCCAACTAGTAAAGCTTG+TGG + chr8_3:8945625-8945644 Msa1275090:intron 35.0%
ATCCAACTAGTAAAGCTTGT+GGG + chr8_3:8945626-8945645 Msa1275090:intron 35.0%
CAACAAAGGTTAGGATCAAA+TGG - chr8_3:8945693-8945712 None:intergenic 35.0%
! CCTTCTTTTCATTCTTACTG+TGG - chr8_3:8945996-8946015 None:intergenic 35.0%
CCACAGTAAGAATGAAAAGA+AGG + chr8_3:8945993-8946012 Msa1275090:CDS 35.0%
! AGAACTGGCTTCATACTTTA+TGG - chr8_3:8946052-8946071 None:intergenic 35.0%
ACTGTATGAGTATGTAGAAC+TGG - chr8_3:8946067-8946086 None:intergenic 35.0%
! CTACATTAGCCAATTTTTCC+TGG - chr8_3:8946143-8946162 None:intergenic 35.0%
! TACATTTTACCTGCTATGCT+AGG + chr8_3:8946293-8946312 Msa1275090:three_prime_UTR 35.0%
! ACATTTTACCTGCTATGCTA+GGG + chr8_3:8946294-8946313 Msa1275090:three_prime_UTR 35.0%
! CACACTTTCTATGCTAGCTT+TGG - chr8_3:8941905-8941924 None:intergenic 40.0%
CAAAGAAATCAGCTTCCACT+AGG + chr8_3:8942031-8942050 Msa1275090:CDS 40.0%
! ACTCTTGGATGGCCTTTTAT+TGG + chr8_3:8942055-8942074 Msa1275090:CDS 40.0%
GTCTCTTGAGCTTCATAGAA+AGG - chr8_3:8942217-8942236 None:intergenic 40.0%
! CCATTTTACAACTCTCTCTG+AGG - chr8_3:8942291-8942310 None:intergenic 40.0%
CCTCAGAGAGAGTTGTAAAA+TGG + chr8_3:8942288-8942307 Msa1275090:intron 40.0%
! GTGTTGTTGCAAACTGTTGT+AGG + chr8_3:8942383-8942402 Msa1275090:intron 40.0%
GTTGCAAACTGTTGTAGGTA+TGG + chr8_3:8942388-8942407 Msa1275090:intron 40.0%
GCATCTGTTGAAACTATGGT+AGG - chr8_3:8942445-8942464 None:intergenic 40.0%
AGAAGTCACCATGAGATTGA+AGG - chr8_3:8942861-8942880 None:intergenic 40.0%
CCAATACATGAAAGGCAATC+TGG - chr8_3:8943469-8943488 None:intergenic 40.0%
CCAGATTGCCTTTCATGTAT+TGG + chr8_3:8943466-8943485 Msa1275090:intron 40.0%
!! GCATTGATTAGTTTGGAACC+AGG + chr8_3:8943494-8943513 Msa1275090:CDS 40.0%
! TTTGGAACCAGGTGAAGAAA+TGG + chr8_3:8943505-8943524 Msa1275090:CDS 40.0%
AGAAGTTCCATTTCTTCACC+TGG - chr8_3:8943515-8943534 None:intergenic 40.0%
TCTTTGCCAATAAACCTACC+AGG + chr8_3:8943572-8943591 Msa1275090:CDS 40.0%
TTGGTTCCTGGTAGGTTTAT+TGG - chr8_3:8943581-8943600 None:intergenic 40.0%
! GATTGATAGAGTTTGGTTCC+TGG - chr8_3:8943593-8943612 None:intergenic 40.0%
CAGGCAAAGCATGCTATATA+TGG - chr8_3:8943654-8943673 None:intergenic 40.0%
GTGAAGTCATCATTACTTGC+AGG - chr8_3:8943673-8943692 None:intergenic 40.0%
TGAAGTTCCAAGAGATGTAG+TGG + chr8_3:8943770-8943789 Msa1275090:CDS 40.0%
TGATATGATGATTCCTGGAG+AGG + chr8_3:8943854-8943873 Msa1275090:CDS 40.0%
GTAGCTAGAGTCATAAGAAC+TGG - chr8_3:8943888-8943907 None:intergenic 40.0%
AAGCAAGAGGACATTCTGAT+AGG - chr8_3:8943917-8943936 None:intergenic 40.0%
AGCGGATAATTAACGAGTAG+CGG + chr8_3:8944033-8944052 Msa1275090:intron 40.0%
CGAGTCAAAAGTTATGCAGA+GGG + chr8_3:8944153-8944172 Msa1275090:intron 40.0%
! CTAGCAGCCAATTTTGTCTA+AGG - chr8_3:8944299-8944318 None:intergenic 40.0%
TAGACAAAATTGGCTGCTAG+TGG + chr8_3:8944299-8944318 Msa1275090:intron 40.0%
CAAAAACTTTGGTGAATGGG+AGG - chr8_3:8944449-8944468 None:intergenic 40.0%
! ACTGAACTTTGGTGATTCAC+AGG + chr8_3:8944553-8944572 Msa1275090:intron 40.0%
GAAACTCAAAGATCAGCTTG+GGG + chr8_3:8944595-8944614 Msa1275090:CDS 40.0%
AAACTCAAAGATCAGCTTGG+GGG + chr8_3:8944596-8944615 Msa1275090:CDS 40.0%
GTTTGATAAGGAACTGTGCT+TGG - chr8_3:8944673-8944692 None:intergenic 40.0%
GCCCATATCAATTCAATCCA+TGG + chr8_3:8944904-8944923 Msa1275090:CDS 40.0%
ATCAATTCAATCCATGGAGG+TGG + chr8_3:8944910-8944929 Msa1275090:CDS 40.0%
TTCCGCTACACTTTAGATCT+TGG + chr8_3:8944947-8944966 Msa1275090:intron 40.0%
GCAAATCTCGATTTCAAGCT+CGG + chr8_3:8945057-8945076 Msa1275090:CDS 40.0%
! CGATTTCAAGCTCGGTATTT+TGG + chr8_3:8945065-8945084 Msa1275090:intron 40.0%
!! TAATGTAATGGGGGGTTTTC+AGG + chr8_3:8945212-8945231 Msa1275090:intron 40.0%
!! AATTTCACTCCTTTTGGAGG+AGG + chr8_3:8945255-8945274 Msa1275090:CDS 40.0%
AACAAGGTGATGCAGAAAGA+TGG - chr8_3:8945325-8945344 None:intergenic 40.0%
AACTCCACGTAGTTACAGAA+TGG - chr8_3:8945452-8945471 None:intergenic 40.0%
TAACTACGTGGAGTTCATGT+AGG + chr8_3:8945457-8945476 Msa1275090:intron 40.0%
TCCAACTAGTAAAGCTTGTG+GGG + chr8_3:8945627-8945646 Msa1275090:intron 40.0%
GAAGGATGCCTATCTTAGTA+AGG + chr8_3:8946011-8946030 Msa1275090:CDS 40.0%
TCCACTCTCCTTACTAAGAT+AGG - chr8_3:8946022-8946041 None:intergenic 40.0%
GGCTTCATACTTTATGGCTA+AGG - chr8_3:8946046-8946065 None:intergenic 40.0%
ATTCTGACACCAACACACGT+GGG - chr8_3:8942807-8942826 None:intergenic 45.0%
! GATAGAGTTTGGTTCCTGGT+AGG - chr8_3:8943589-8943608 None:intergenic 45.0%
AGCACATCCACTACATCTCT+TGG - chr8_3:8943780-8943799 None:intergenic 45.0%
GCGAGTCAAAAGTTATGCAG+AGG + chr8_3:8944152-8944171 Msa1275090:intron 45.0%
CAAAATTGGCTGCTAGTGGT+AGG + chr8_3:8944303-8944322 Msa1275090:intron 45.0%
! GAACTTTGGTGATTCACAGG+TGG + chr8_3:8944556-8944575 Msa1275090:intron 45.0%
AACTCAAAGATCAGCTTGGG+GGG + chr8_3:8944597-8944616 Msa1275090:CDS 45.0%
GCTAACTGCATGCAATCACA+GGG - chr8_3:8945010-8945029 None:intergenic 45.0%
AACGGCTCAGAATTCAGTGT+CGG - chr8_3:8945110-8945129 None:intergenic 45.0%
!! AATGGGGGGTTTTCAGGATA+AGG + chr8_3:8945218-8945237 Msa1275090:intron 45.0%
TTGCTCAAACTTAGGAGCAG+AGG + chr8_3:8945389-8945408 Msa1275090:intron 45.0%
TCTGCCATTCTGTAACTACG+TGG + chr8_3:8945445-8945464 Msa1275090:intron 45.0%
CCAACTAGTAAAGCTTGTGG+GGG + chr8_3:8945628-8945647 Msa1275090:intron 45.0%
TACACTTGACCACTGTCACT+TGG + chr8_3:8945739-8945758 Msa1275090:intron 45.0%
! ACACTTGACCACTGTCACTT+GGG + chr8_3:8945740-8945759 Msa1275090:intron 45.0%
TAAACAGTCCCAAGTGACAG+TGG - chr8_3:8945751-8945770 None:intergenic 45.0%
GCCTATCTTAGTAAGGAGAG+TGG + chr8_3:8946018-8946037 Msa1275090:CDS 45.0%
AAAAGGATAAATGGAGGGCC+AGG + chr8_3:8946122-8946141 Msa1275090:three_prime_UTR 45.0%
AATGGAGGGCCAGGAAAAAT+TGG + chr8_3:8946131-8946150 Msa1275090:three_prime_UTR 45.0%
TTTGAAGGACCCCGTCAATT+AGG + chr8_3:8946245-8946264 Msa1275090:three_prime_UTR 45.0%
! CTTTTCTTCCCTAGCATAGC+AGG - chr8_3:8946305-8946324 None:intergenic 45.0%
CTGCTATGCTAGGGAAGAAA+AGG + chr8_3:8946303-8946322 Msa1275090:three_prime_UTR 45.0%
TTCCACTAGGCACTCTTGGA+TGG + chr8_3:8942044-8942063 Msa1275090:CDS 50.0%
GCTTGGTCATGAAGCTCTCA+GGG - chr8_3:8942120-8942139 None:intergenic 50.0%
AACTTACATGGCGCATCGCT+TGG - chr8_3:8942137-8942156 None:intergenic 50.0%
ACACACTCAGAGACTGAGAG+GGG - chr8_3:8942750-8942769 None:intergenic 50.0%
CACACACTCAGAGACTGAGA+GGG - chr8_3:8942751-8942770 None:intergenic 50.0%
ACACACACTCAGAGACTGAG+AGG - chr8_3:8942752-8942771 None:intergenic 50.0%
GATTCTGACACCAACACACG+TGG - chr8_3:8942808-8942827 None:intergenic 50.0%
GTTATGCAGAGGGCTCCTAA+TGG + chr8_3:8944163-8944182 Msa1275090:intron 50.0%
GCAAACACACACCATCCTTG+TGG - chr8_3:8944843-8944862 None:intergenic 50.0%
TCTCTTACTTGCCACCTCCA+TGG - chr8_3:8944924-8944943 None:intergenic 50.0%
GGCTAACTGCATGCAATCAC+AGG - chr8_3:8945011-8945030 None:intergenic 50.0%
TGCATGCAGTTAGCCACGTT+TGG + chr8_3:8945016-8945035 Msa1275090:intron 50.0%
TTGATCAGACGGTCCAAACG+TGG - chr8_3:8945032-8945051 None:intergenic 50.0%
!! CTCCTTTTGGAGGAGGACAA+AGG + chr8_3:8945262-8945281 Msa1275090:CDS 50.0%
AGCCTTTGTCCTCCTCCAAA+AGG - chr8_3:8945267-8945286 None:intergenic 50.0%
AACCTTGCCAAGTCAAGACC+AGG - chr8_3:8945294-8945313 None:intergenic 50.0%
!! TGGTCTTGACTTGGCAAGGT+TGG + chr8_3:8945293-8945312 Msa1275090:CDS 50.0%
CCCCCACAAGCTTTACTAGT+TGG - chr8_3:8945631-8945650 None:intergenic 50.0%
GGCTAATGTAGACACACGTG+TGG + chr8_3:8946152-8946171 Msa1275090:three_prime_UTR 50.0%
CAGCTTCCACTAGGCACTCT+TGG + chr8_3:8942040-8942059 Msa1275090:CDS 55.0%
TGGTCATGAAGCTCTCAGGG+CGG - chr8_3:8942117-8942136 None:intergenic 55.0%
CGCTTGGTCATGAAGCTCTC+AGG - chr8_3:8942121-8942140 None:intergenic 55.0%
CTGAGAGGGGAAGGAAACAG+AGG - chr8_3:8942737-8942756 None:intergenic 55.0%
ACTCAGAGACTGAGAGGGGA+AGG - chr8_3:8942746-8942765 None:intergenic 55.0%
CTTCTCTCTCCCACGTGTGT+TGG + chr8_3:8942795-8942814 Msa1275090:intron 55.0%
ACTGGAACTGAGTCCTCTCC+AGG - chr8_3:8943870-8943889 None:intergenic 55.0%
!! GCTGTGTCCTGGTCTTGACT+TGG + chr8_3:8945284-8945303 Msa1275090:CDS 55.0%
!! GTCCTGGTCTTGACTTGGCA+AGG + chr8_3:8945289-8945308 Msa1275090:CDS 55.0%
!! GGCCATCCAAGAGTGCCTAG+TGG - chr8_3:8942049-8942068 None:intergenic 60.0%
CATGAAGCTCTCAGGGCGGT+CGG - chr8_3:8942113-8942132 None:intergenic 60.0%
AGCTTGGGGGGCCTTTGTGT+TGG + chr8_3:8944609-8944628 Msa1275090:CDS 60.0%
GGAGGACAAAGGCTGTGTCC+TGG + chr8_3:8945273-8945292 Msa1275090:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 8941876 8946371 8941876 ID=Msa1275090;Name=Msa1275090
chr8_3 mRNA 8941876 8946371 8941876 ID=Msa1275090-mRNA-1;Parent=Msa1275090;Name=Msa1275090-mRNA-1;_AED=0.07;_eAED=0.07;_QI=59|0.62|0.77|0.88|1|1|9|323|495
chr8_3 exon 8941876 8942149 8941876 ID=Msa1275090-mRNA-1:exon:3734;Parent=Msa1275090-mRNA-1
chr8_3 exon 8942405 8942729 8942405 ID=Msa1275090-mRNA-1:exon:3735;Parent=Msa1275090-mRNA-1
chr8_3 exon 8943470 8943628 8943470 ID=Msa1275090-mRNA-1:exon:3736;Parent=Msa1275090-mRNA-1
chr8_3 exon 8943705 8943950 8943705 ID=Msa1275090-mRNA-1:exon:3737;Parent=Msa1275090-mRNA-1
chr8_3 exon 8944575 8944664 8944575 ID=Msa1275090-mRNA-1:exon:3738;Parent=Msa1275090-mRNA-1
chr8_3 exon 8944750 8944935 8944750 ID=Msa1275090-mRNA-1:exon:3739;Parent=Msa1275090-mRNA-1
chr8_3 exon 8945025 8945078 8945025 ID=Msa1275090-mRNA-1:exon:3740;Parent=Msa1275090-mRNA-1
chr8_3 exon 8945234 8945355 8945234 ID=Msa1275090-mRNA-1:exon:3741;Parent=Msa1275090-mRNA-1
chr8_3 exon 8945958 8946371 8945958 ID=Msa1275090-mRNA-1:exon:3742;Parent=Msa1275090-mRNA-1
chr8_3 five_prime_UTR 8941876 8941934 8941876 ID=Msa1275090-mRNA-1:five_prime_utr;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8941935 8942149 8941935 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8942405 8942729 8942405 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8943470 8943628 8943470 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8943705 8943950 8943705 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8944575 8944664 8944575 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8944750 8944935 8944750 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8945025 8945078 8945025 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8945234 8945355 8945234 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 CDS 8945958 8946048 8945958 ID=Msa1275090-mRNA-1:cds;Parent=Msa1275090-mRNA-1
chr8_3 three_prime_UTR 8946049 8946371 8946049 ID=Msa1275090-mRNA-1:three_prime_utr;Parent=Msa1275090-mRNA-1
Gene Sequence

>Msa1275090

ATGGACACTACTTGGGTTCTATTTGTGACACCAATTTTCTTGTGCACTTTGATCTTCTACTACAGAAACAGTCTTAGTCTTAAGCTCAAACCAAAACAAAGAAATCAGCTTCCACTAGGCACTCTTGGATGGCCTTTTATTGGCGAAACCATAGATTTTGTTTCTTGTGCTTACACCGACCGCCCTGAGAGCTTCATGACCAAGCGATGCGCCATGTATGGTAAAGTGTTCAAGTCACACATATTTGGAAGCCCTACCATAGTTTCAACAGATGCAGATGTGAACAAGTTTATACTACAAAGTGATGCAAAGGTTTTTGTTCCTTCTTATCCCAAGTCATTGATGCAGTTAATGGGAGAGTCTTCTATTTTGCTCATCAATGGAACCTTGCAAAGAAGAATACATGGACTTATTGGTGCTTTCTTCAAGTCTCAACAGTTAAAGGTTCAGATTACCTCAGATATGCAGAAGTATGTACAAGAATCAATGGCAAATTGGAAAGAGGACCAACCTATATACATACAAGATGAAACAAAAAAGATTGCCTTTCATGTATTGGTTAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTTCTAAAAAAACATTTTCAGGAATTTATCTCTGGCCTAATGTCTTTGCCAATAAACCTACCAGGAACCAAACTCTATCAATCTTTACAGGCAAGTCAAGCAAAAAAGAAAATGGTGAAATTAGTGAGAAAAACTGTCCAAGCTAAAAGAAATAAAGGCATCTTTGAAGTTCCAAGAGATGTAGTGGATGTGCTTCTTAATGATGCAAGTGAGAAATTGACAGATGACTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGACTCAGTTCCAGTTCTTATGACTCTAGCTACAAAATACCTATCAGAATGTCCTCTTGCTTTACAACAATTGACGGTGGAGAATATAAAGCTCAAGAAACTCAAAGATCAGCTTGGGGGGCCTTTGTGTTGGAATGATTACTTATCATTGCCATTTACTCAAAAAGTAATCACTGAAACTTTGAGAATGGGAAATATTATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTATTTAATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGAGTGCCCATATCAATTCAATCCATGGAGGTGGCAATTAGCCACGTTTGGACCGTCTGATCAAAATAAGCAAATCTCGATTTCAAGCTCGGATAAGGACATGAACAGTTACAATTTCACTCCTTTTGGAGGAGGACAAAGGCTGTGTCCTGGTCTTGACTTGGCAAGGTTGGAAGCTTCCATCTTTCTGCATCACCTTGTTACTCAATTCAGATGGTATGCAGAAGAAGATACAATAGTGAACTTCCCCACAGTAAGAATGAAAAGAAGGATGCCTATCTTAGTAAGGAGAGTGGAACCTTAG
Protein sequence

>Msa1275090

MDTTWVLFVTPIFLCTLIFYYRNSLSLKLKPKQRNQLPLGTLGWPFIGETIDFVSCAYTDRPESFMTKRCAMYGKVFKSHIFGSPTIVSTDADVNKFILQSDAKVFVPSYPKSLMQLMGESSILLINGTLQRRIHGLIGAFFKSQQLKVQITSDMQKYVQESMANWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQASQAKKKMVKLVRKTVQAKRNKGIFEVPRDVVDVLLNDASEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPLALQQLTVENIKLKKLKDQLGGPLCWNDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQLATFGPSDQNKQISISSSDKDMNSYNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAEEDTIVNFPTVRMKRRMPILVRRVEP*