Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314660 | XP_003627292.1 | 100.000 | 101 | 0 | 0 | 8 | 108 | 50 | 150 | 5.73e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314660 | sp|Q8GYJ4|MIA40_ARATH | 63.000 | 100 | 33 | 1 | 9 | 104 | 58 | 157 | 5.11e-40 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314660 | Q4VYC7 | 100.000 | 101 | 0 | 0 | 8 | 108 | 50 | 150 | 2.74e-68 | 211 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0383800 | Msa1314660 | 0.801493 | 8.775326e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314660 | MtrunA17_Chr8g0344081 | 100.000 | 101 | 0 | 0 | 8 | 108 | 50 | 150 | 5.27e-72 | 211 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314660 | AT5G23395.1 | 63.000 | 100 | 33 | 1 | 9 | 104 | 58 | 157 | 5.20e-41 | 133 |
Find 32 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGACATGTCATATTTC+AGG | 0.244457 | 8_4:-13679755 | None:intergenic |
| AATCGAAGTCAAGGCTTTAA+AGG | 0.258964 | 8_4:+13679631 | Msa1314660:CDS |
| GAAAGTGTGAAAACAGAAAA+TGG | 0.279642 | 8_4:+13679841 | Msa1314660:three_prime_UTR |
| TGCATTATTGAAAATGTTAC+TGG | 0.295121 | 8_4:+13679721 | Msa1314660:three_prime_UTR |
| CAACTCTGCAGAGCAATAAA+TGG | 0.298810 | 8_4:-13679489 | None:intergenic |
| CCTATATGATCTCAGAAAAC+AGG | 0.328800 | 8_4:-13679819 | None:intergenic |
| GCATTCTCTAAGGACATTCT+TGG | 0.331679 | 8_4:+13679531 | Msa1314660:CDS |
| TCTTCAGAATGTTGAGGAAA+TGG | 0.350766 | 8_4:+13678049 | Msa1314660:intron |
| AAAATGTTACTGGTTGGATA+AGG | 0.360911 | 8_4:+13679731 | Msa1314660:three_prime_UTR |
| ACTTCCTCCAGACTGGTCTA+AGG | 0.391610 | 8_4:+13679599 | Msa1314660:CDS |
| TGCTCTGCAGAGTTGCATAA+AGG | 0.396409 | 8_4:+13679497 | Msa1314660:CDS |
| ATGTCCTTAGAGAATGCATT+TGG | 0.408018 | 8_4:-13679525 | None:intergenic |
| CAAGAGTACTTCTGAAGAAA+AGG | 0.427204 | 8_4:+13678160 | Msa1314660:CDS |
| AAATGTTACTGGTTGGATAA+GGG | 0.427456 | 8_4:+13679732 | Msa1314660:three_prime_UTR |
| CAATCCAAATGCATTCTCTA+AGG | 0.430773 | 8_4:+13679521 | Msa1314660:CDS |
| ACTTAAGAAGTGGTCCTTGT+GGG | 0.431726 | 8_4:+13678105 | Msa1314660:CDS |
| TGAGATTCCTTAGACCAGTC+TGG | 0.446549 | 8_4:-13679606 | None:intergenic |
| CTTAGAGAATGCATTTGGAT+TGG | 0.462746 | 8_4:-13679520 | None:intergenic |
| ACAAAATACTTCCTCCAGAC+TGG | 0.533440 | 8_4:+13679592 | Msa1314660:CDS |
| TGTATTGCTGACTTAAGAAG+TGG | 0.560764 | 8_4:+13678095 | Msa1314660:CDS |
| GACTTAAGAAGTGGTCCTTG+TGG | 0.561507 | 8_4:+13678104 | Msa1314660:CDS |
| CTTCTTAAGTCAGCAATACA+AGG | 0.562798 | 8_4:-13678092 | None:intergenic |
| ACAGAAAATGGATGCAAACA+AGG | 0.570579 | 8_4:+13679853 | Msa1314660:three_prime_UTR |
| CTATATGATCTCAGAAAACA+GGG | 0.574652 | 8_4:-13679818 | None:intergenic |
| TTATTGAAAATGTTACTGGT+TGG | 0.576739 | 8_4:+13679725 | Msa1314660:three_prime_UTR |
| CGAAGATGAAAGCAAGGAGT+CGG | 0.586038 | 8_4:+13679554 | Msa1314660:CDS |
| TTGTGGGTTTCAATTCTCAG+AGG | 0.592348 | 8_4:+13678121 | Msa1314660:CDS |
| TCTTGGCGAAGATGAAAGCA+AGG | 0.641075 | 8_4:+13679548 | Msa1314660:CDS |
| GATTCCTTAGACCAGTCTGG+AGG | 0.679007 | 8_4:-13679603 | None:intergenic |
| AAGTACTCTTGAGAAAACAA+AGG | 0.679570 | 8_4:-13678148 | None:intergenic |
| TCTGAGAATTGAAACCCACA+AGG | 0.739647 | 8_4:-13678119 | None:intergenic |
| GAAAATGGATGCAAACAAGG+CGG | 0.741135 | 8_4:+13679856 | Msa1314660:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTTATAATAATTATACA+TGG | + | chr8_4:13674593-13674612 | Msa1314660:intron | 10.0% |
| !! | AAAAGAAAAAAAAACTTAAA+AGG | - | chr8_4:13675162-13675181 | None:intergenic | 10.0% |
| !!! | ATGAATTTTCATATTTTTTA+CGG | + | chr8_4:13675740-13675759 | Msa1314660:intron | 10.0% |
| !! | AAATTATGATTATTTCAAAA+AGG | + | chr8_4:13677722-13677741 | Msa1314660:intron | 10.0% |
| !!! | TTATTTCTATTTTTTGAAAA+TGG | + | chr8_4:13678547-13678566 | Msa1314660:intron | 10.0% |
| !! | AATTTGAAAAATGATTTAAA+AGG | + | chr8_4:13678630-13678649 | Msa1314660:intron | 10.0% |
| !!! | AAAACAAGTTTTAATTTTAA+TGG | + | chr8_4:13678899-13678918 | Msa1314660:intron | 10.0% |
| !! | TTTCACTTTAATTAGAAATA+TGG | + | chr8_4:13673229-13673248 | Msa1314660:intron | 15.0% |
| !! | TTTAAACTTTGAACTTTATA+AGG | - | chr8_4:13673320-13673339 | None:intergenic | 15.0% |
| !!! | ATTTTATGAACAAAATATGT+TGG | - | chr8_4:13673473-13673492 | None:intergenic | 15.0% |
| !!! | ACATGTTGTTAATAAAATTT+TGG | - | chr8_4:13673850-13673869 | None:intergenic | 15.0% |
| !! | TTATAATAATTATACATGGA+TGG | + | chr8_4:13674597-13674616 | Msa1314660:intron | 15.0% |
| !! | TAATATTTCTCACATAAATT+TGG | - | chr8_4:13675068-13675087 | None:intergenic | 15.0% |
| !! | ATTACATAAAGTCAAATAAA+TGG | + | chr8_4:13675084-13675103 | Msa1314660:intron | 15.0% |
| !!! | AAATTGTATCATTTACTTTT+TGG | + | chr8_4:13675136-13675155 | Msa1314660:intron | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | - | chr8_4:13675587-13675606 | None:intergenic | 15.0% |
| !! | AGATTATGAATATTTCAAAA+AGG | - | chr8_4:13677885-13677904 | None:intergenic | 15.0% |
| !! | TGAATAAATCAATGAAAAAT+TGG | + | chr8_4:13678012-13678031 | Msa1314660:intron | 15.0% |
| !! | ACTAATGAATTGAAAAAAAT+CGG | + | chr8_4:13678381-13678400 | Msa1314660:intron | 15.0% |
| !!! | AATTTTGTTTAGAAAAAGAA+GGG | + | chr8_4:13678694-13678713 | Msa1314660:intron | 15.0% |
| !!! | TTTTGTTTACACATTTTATT+TGG | - | chr8_4:13678825-13678844 | None:intergenic | 15.0% |
| !!! | TTTAAAACTGCAATTAAAAA+AGG | + | chr8_4:13678932-13678951 | Msa1314660:intron | 15.0% |
| !! | AAAATTGAATACATAATCTA+CGG | - | chr8_4:13679144-13679163 | None:intergenic | 15.0% |
| !!! | ACACTTTTAATTTTATTTTC+TGG | + | chr8_4:13679392-13679411 | Msa1314660:intron | 15.0% |
| !! | AAAAAAATGAAATAATAAGG+TGG | - | chr8_4:13679797-13679816 | None:intergenic | 15.0% |
| !! | GGAAAAAAAATGAAATAATA+AGG | - | chr8_4:13679800-13679819 | None:intergenic | 15.0% |
| !! | AAAGTTCAAAGTTTAAAGAT+AGG | + | chr8_4:13673323-13673342 | Msa1314660:intron | 20.0% |
| !! | CTAAATAAAATCTTAAGCTA+AGG | + | chr8_4:13673393-13673412 | Msa1314660:intron | 20.0% |
| !! | TAACATCACAAATCAATATT+GGG | - | chr8_4:13673440-13673459 | None:intergenic | 20.0% |
| !! | TTAACATCACAAATCAATAT+TGG | - | chr8_4:13673441-13673460 | None:intergenic | 20.0% |
| !! | AGAAATTAAGTGATTATGAT+TGG | - | chr8_4:13673962-13673981 | None:intergenic | 20.0% |
| !! | AAACAATTCCAAAAAATAAC+CGG | - | chr8_4:13674761-13674780 | None:intergenic | 20.0% |
| !!! | TTTTTGGAATTGTTTTCTTA+TGG | + | chr8_4:13674766-13674785 | Msa1314660:intron | 20.0% |
| !!! | TACAAAACTTTTGTCATTAA+GGG | - | chr8_4:13675275-13675294 | None:intergenic | 20.0% |
| !!! | TTACAAAACTTTTGTCATTA+AGG | - | chr8_4:13675276-13675295 | None:intergenic | 20.0% |
| !!! | TTCAGACTCTTTAATTTTTT+TGG | - | chr8_4:13675402-13675421 | None:intergenic | 20.0% |
| !!! | AACATATTTAACCCTATTTT+TGG | - | chr8_4:13675498-13675517 | None:intergenic | 20.0% |
| !!! | AATAGGGTTAAATATGTTTT+TGG | + | chr8_4:13675500-13675519 | Msa1314660:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+GGG | - | chr8_4:13675527-13675546 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | - | chr8_4:13675588-13675607 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | + | chr8_4:13675591-13675610 | Msa1314660:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr8_4:13675618-13675637 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr8_4:13675619-13675638 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATTGCTACTTT+CGG | - | chr8_4:13675895-13675914 | None:intergenic | 20.0% |
| !!! | TAGCAATTGAAAATTTTACA+GGG | + | chr8_4:13675899-13675918 | Msa1314660:intron | 20.0% |
| !! | GAAAAGTAGACATATTTATA+GGG | + | chr8_4:13675959-13675978 | Msa1314660:intron | 20.0% |
| !!! | ATGACTAAATGATATTTTTG+GGG | - | chr8_4:13676003-13676022 | None:intergenic | 20.0% |
| !!! | CATGACTAAATGATATTTTT+GGG | - | chr8_4:13676004-13676023 | None:intergenic | 20.0% |
| !!! | TCATGACTAAATGATATTTT+TGG | - | chr8_4:13676005-13676024 | None:intergenic | 20.0% |
| !! | ATCACTATTCTTTAAACATA+TGG | + | chr8_4:13676168-13676187 | Msa1314660:intron | 20.0% |
| !! | AATCAATTTCTTACTAGAAA+TGG | - | chr8_4:13676400-13676419 | None:intergenic | 20.0% |
| !!! | TGTTGATTAGTCAAAAAATA+AGG | + | chr8_4:13677383-13677402 | Msa1314660:intron | 20.0% |
| !! | TCTAAATTGAAAGGATATAA+AGG | + | chr8_4:13677486-13677505 | Msa1314660:intron | 20.0% |
| !! | ACTCTGTTAAATTGTTAATT+AGG | + | chr8_4:13677751-13677770 | Msa1314660:intron | 20.0% |
| !! | CAAATATGATTGTTAAGTTA+AGG | - | chr8_4:13677810-13677829 | None:intergenic | 20.0% |
| !! | CTTAACTTAACAATCATATT+TGG | + | chr8_4:13677808-13677827 | Msa1314660:intron | 20.0% |
| !!! | TTTGAAATATTCATAATCTC+AGG | + | chr8_4:13677886-13677905 | Msa1314660:intron | 20.0% |
| !! | TTGAAATATTCATAATCTCA+GGG | + | chr8_4:13677887-13677906 | Msa1314660:intron | 20.0% |
| !! | TTTAACATCAAATTCAACTT+TGG | + | chr8_4:13677976-13677995 | Msa1314660:intron | 20.0% |
| !! | AAAAATAGAAATAAGAACTC+AGG | - | chr8_4:13678541-13678560 | None:intergenic | 20.0% |
| !!! | AATTTTGAGAAACTTCTTTT+TGG | + | chr8_4:13678580-13678599 | Msa1314660:intron | 20.0% |
| !!! | CAATTTTGTTTAGAAAAAGA+AGG | + | chr8_4:13678693-13678712 | Msa1314660:intron | 20.0% |
| !!! | ATCTACGGTTATTTTTTAAT+GGG | - | chr8_4:13679129-13679148 | None:intergenic | 20.0% |
| !!! | AATCTACGGTTATTTTTTAA+TGG | - | chr8_4:13679130-13679149 | None:intergenic | 20.0% |
| ! | TTAGAAATATGGCCTAAATA+TGG | + | chr8_4:13673240-13673259 | Msa1314660:intron | 25.0% |
| ! | TAGACTTATGAACCATATTT+AGG | - | chr8_4:13673255-13673274 | None:intergenic | 25.0% |
| !!! | AGTTCTTACTTTTTCTTTTC+AGG | + | chr8_4:13673278-13673297 | Msa1314660:intron | 25.0% |
| ! | AAATCATACGTAATCTACAT+TGG | + | chr8_4:13673489-13673508 | Msa1314660:intron | 25.0% |
| ! | ATGTTTACTATTTGAGTCAA+TGG | - | chr8_4:13673648-13673667 | None:intergenic | 25.0% |
| ! | AATATCAAACCTTTCTATCA+AGG | + | chr8_4:13673715-13673734 | Msa1314660:intron | 25.0% |
| !!! | GAAGCTTTATAAGGATTTTA+AGG | - | chr8_4:13673940-13673959 | None:intergenic | 25.0% |
| !! | TTATGATTGGAAGCTTTATA+AGG | - | chr8_4:13673949-13673968 | None:intergenic | 25.0% |
| ! | AAATTTAGGGAAAGCTAATT+TGG | - | chr8_4:13673985-13674004 | None:intergenic | 25.0% |
| ! | TTTCCCTAAATTTGATCTAA+TGG | + | chr8_4:13673992-13674011 | Msa1314660:intron | 25.0% |
| ! | GATCCATTAGATCAAATTTA+GGG | - | chr8_4:13673998-13674017 | None:intergenic | 25.0% |
| ! | ATGCAATATCAAATAGTTTG+CGG | - | chr8_4:13674067-13674086 | None:intergenic | 25.0% |
| ! | GACACTATTATATCAAAACA+CGG | - | chr8_4:13674332-13674351 | None:intergenic | 25.0% |
| !! | TTTTGATATAATAGTGTCCA+CGG | + | chr8_4:13674334-13674353 | Msa1314660:intron | 25.0% |
| ! | AACATATGCTTCTTTGATAT+TGG | + | chr8_4:13674722-13674741 | Msa1314660:intron | 25.0% |
| ! | TTAAAAATATGTTGAGCACA+AGG | - | chr8_4:13675003-13675022 | None:intergenic | 25.0% |
| ! | TCTCACATAAATTTGGAAAA+AGG | - | chr8_4:13675061-13675080 | None:intergenic | 25.0% |
| !!! | TTAGTCCTTCAAGTATTTTT+TGG | + | chr8_4:13675217-13675236 | Msa1314660:intron | 25.0% |
| ! | ATGAACCAAAAAATACTTGA+AGG | - | chr8_4:13675225-13675244 | None:intergenic | 25.0% |
| ! | AACATTAGACATTAACATGA+CGG | - | chr8_4:13675319-13675338 | None:intergenic | 25.0% |
| ! | TGTCTAATGTTTGTAACTTA+AGG | + | chr8_4:13675328-13675347 | Msa1314660:intron | 25.0% |
| ! | GTCTAATGTTTGTAACTTAA+GGG | + | chr8_4:13675329-13675348 | Msa1314660:intron | 25.0% |
| ! | CGAAAAGTTGACATATTTAT+AGG | - | chr8_4:13675528-13675547 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr8_4:13675558-13675577 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr8_4:13675559-13675578 | None:intergenic | 25.0% |
| !! | GTAGCAATTGAAAATTTTAC+AGG | + | chr8_4:13675898-13675917 | Msa1314660:intron | 25.0% |
| ! | CGAAAAGTAGACATATTTAT+AGG | + | chr8_4:13675958-13675977 | Msa1314660:intron | 25.0% |
| !!! | TGACTAAATGATATTTTTGG+GGG | - | chr8_4:13676002-13676021 | None:intergenic | 25.0% |
| ! | ACTATTAGGCTATAATAATG+TGG | + | chr8_4:13676134-13676153 | Msa1314660:intron | 25.0% |
| ! | CTATTAGGCTATAATAATGT+GGG | + | chr8_4:13676135-13676154 | Msa1314660:intron | 25.0% |
| ! | CAAATGATCAATGATATAGT+TGG | - | chr8_4:13676235-13676254 | None:intergenic | 25.0% |
| ! | TTCTGTTCACATTATTAATG+TGG | - | chr8_4:13676584-13676603 | None:intergenic | 25.0% |
| !! | TTTTCATTTCATTTTCCCAT+GGG | - | chr8_4:13676659-13676678 | None:intergenic | 25.0% |
| ! | TCAACAGAAAAAAGTGAAAT+TGG | + | chr8_4:13676720-13676739 | Msa1314660:intron | 25.0% |
| ! | TTAATATTACAGTGTATGCA+TGG | + | chr8_4:13676775-13676794 | Msa1314660:intron | 25.0% |
| ! | TAATATTACAGTGTATGCAT+GGG | + | chr8_4:13676776-13676795 | Msa1314660:intron | 25.0% |
| ! | GTGATATTTAGTTGGATATT+TGG | - | chr8_4:13677054-13677073 | None:intergenic | 25.0% |
| ! | ATAGTAGTGTGATATTTAGT+TGG | - | chr8_4:13677062-13677081 | None:intergenic | 25.0% |
| !! | TGCTATCTTAGATGATTTTT+AGG | + | chr8_4:13677228-13677247 | Msa1314660:intron | 25.0% |
| !! | GCTATCTTAGATGATTTTTA+GGG | + | chr8_4:13677229-13677248 | Msa1314660:intron | 25.0% |
| ! | GGTGGAGAATTATATTTATA+TGG | + | chr8_4:13677250-13677269 | Msa1314660:intron | 25.0% |
| ! | CTCAAAATCTAAGTAATGTT+GGG | + | chr8_4:13677423-13677442 | Msa1314660:intron | 25.0% |
| ! | AATTTAGAAAACGACTTGAT+CGG | - | chr8_4:13677474-13677493 | None:intergenic | 25.0% |
| !!! | AAGTCGTTTTCTAAATTGAA+AGG | + | chr8_4:13677477-13677496 | Msa1314660:intron | 25.0% |
| ! | GAAAGATAAACACAAAATCT+TGG | + | chr8_4:13677510-13677529 | Msa1314660:intron | 25.0% |
| ! | TTAACAATTTAACAGAGTCA+GGG | - | chr8_4:13677749-13677768 | None:intergenic | 25.0% |
| ! | ATTAACAATTTAACAGAGTC+AGG | - | chr8_4:13677750-13677769 | None:intergenic | 25.0% |
| ! | ATACCAAGTGGTTAAATATA+GGG | - | chr8_4:13677778-13677797 | None:intergenic | 25.0% |
| ! | TTAACAATCATATTTGGTCA+AGG | + | chr8_4:13677814-13677833 | Msa1314660:intron | 25.0% |
| ! | TAACAATCATATTTGGTCAA+GGG | + | chr8_4:13677815-13677834 | Msa1314660:intron | 25.0% |
| ! | GGTAAAATTTAATAGAGTTG+AGG | + | chr8_4:13677858-13677877 | Msa1314660:intron | 25.0% |
| ! | CAAATTGATTATGTAGATTG+TGG | - | chr8_4:13678354-13678373 | None:intergenic | 25.0% |
| ! | CAAAAAGAAAAAAACATGTC+TGG | + | chr8_4:13678657-13678676 | Msa1314660:intron | 25.0% |
| ! | TGTGTAAACAAAACAATTCT+AGG | + | chr8_4:13678832-13678851 | Msa1314660:intron | 25.0% |
| !!! | TCTAGGTTGTTTTTGTTTTT+TGG | + | chr8_4:13678849-13678868 | Msa1314660:intron | 25.0% |
| ! | CCATTTGATTAAAAATTGAC+AGG | - | chr8_4:13679241-13679260 | None:intergenic | 25.0% |
| !! | CCTGTCAATTTTTAATCAAA+TGG | + | chr8_4:13679238-13679257 | Msa1314660:intron | 25.0% |
| !! | CAATTTTTAATCAAATGGCT+TGG | + | chr8_4:13679243-13679262 | Msa1314660:intron | 25.0% |
| ! | TGCATTATTGAAAATGTTAC+TGG | + | chr8_4:13679721-13679740 | Msa1314660:three_prime_UTR | 25.0% |
| ! | TTATTGAAAATGTTACTGGT+TGG | + | chr8_4:13679725-13679744 | Msa1314660:three_prime_UTR | 25.0% |
| ! | TTATAAGGTAAGACCTCTTT+TGG | - | chr8_4:13673305-13673324 | None:intergenic | 30.0% |
| ATCACAAATCAATATTGGGA+AGG | - | chr8_4:13673436-13673455 | None:intergenic | 30.0% | |
| TAGTGTTAGTACAAGAAATG+AGG | - | chr8_4:13673561-13673580 | None:intergenic | 30.0% | |
| ! | AAGTTTTTCTCATCACGTTT+TGG | - | chr8_4:13673741-13673760 | None:intergenic | 30.0% |
| ! | TGACCAAAAACAATTTGCTT+AGG | + | chr8_4:13673813-13673832 | Msa1314660:intron | 30.0% |
| !! | GGATTTTAAGGAAGCTATAT+CGG | - | chr8_4:13673928-13673947 | None:intergenic | 30.0% |
| GGATCCATTAGATCAAATTT+AGG | - | chr8_4:13673999-13674018 | None:intergenic | 30.0% | |
| ! | AAATTTGATCTAATGGATCC+AGG | + | chr8_4:13673999-13674018 | Msa1314660:intron | 30.0% |
| !! | ATTTGGGATCAATGTTGTTT+TGG | - | chr8_4:13674030-13674049 | None:intergenic | 30.0% |
| AAAACAACATTGATCCCAAA+TGG | + | chr8_4:13674029-13674048 | Msa1314660:intron | 30.0% | |
| TACACTTCCAACATTAACTA+TGG | + | chr8_4:13674145-13674164 | Msa1314660:intron | 30.0% | |
| GGACACTATTAGAAAAACAT+GGG | - | chr8_4:13674243-13674262 | None:intergenic | 30.0% | |
| TGGACACTATTAGAAAAACA+TGG | - | chr8_4:13674244-13674263 | None:intergenic | 30.0% | |
| ! | GTTTTTCTAATAGTGTCCAA+TGG | + | chr8_4:13674245-13674264 | Msa1314660:intron | 30.0% |
| AATAGTGTCCAATGGTAATT+CGG | + | chr8_4:13674253-13674272 | Msa1314660:intron | 30.0% | |
| ! | GATATTCTAGTTAATAACGC+CGG | - | chr8_4:13674302-13674321 | None:intergenic | 30.0% |
| CAAAAAATTGTTCTAGTGAC+CGG | - | chr8_4:13674533-13674552 | None:intergenic | 30.0% | |
| !!! | GTGTTTTTTGTCACATTAGA+AGG | + | chr8_4:13674679-13674698 | Msa1314660:intron | 30.0% |
| ATGCTTCTTTGATATTGGAT+TGG | + | chr8_4:13674727-13674746 | Msa1314660:intron | 30.0% | |
| ! | GACAATTTTGCAACAAAACA+TGG | + | chr8_4:13674830-13674849 | Msa1314660:intron | 30.0% |
| ACTTCTACAAATTTCTTGAG+AGG | + | chr8_4:13675022-13675041 | Msa1314660:intron | 30.0% | |
| !! | AACCTTTAAGTTGCAAATGT+TGG | + | chr8_4:13675189-13675208 | Msa1314660:intron | 30.0% |
| ATGTTTGTAACTTAAGGGTT+TGG | + | chr8_4:13675334-13675353 | Msa1314660:intron | 30.0% | |
| AACTAAAGCAAAACCCAAAA+AGG | + | chr8_4:13675471-13675490 | Msa1314660:intron | 30.0% | |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr8_4:13675572-13675591 | None:intergenic | 30.0% | |
| ! | AAGTCGAAGGAAAATTTTAG+AGG | + | chr8_4:13675927-13675946 | Msa1314660:intron | 30.0% |
| ! | AGTCGAAGGAAAATTTTAGA+GGG | + | chr8_4:13675928-13675947 | Msa1314660:intron | 30.0% |
| TAATAATGTGAACAGAAGAC+AGG | + | chr8_4:13676587-13676606 | Msa1314660:intron | 30.0% | |
| ! | CTTTTCATTTCATTTTCCCA+TGG | - | chr8_4:13676660-13676679 | None:intergenic | 30.0% |
| GTAATATTAACAGGTTTGGA+TGG | - | chr8_4:13676765-13676784 | None:intergenic | 30.0% | |
| CACTGTAATATTAACAGGTT+TGG | - | chr8_4:13676769-13676788 | None:intergenic | 30.0% | |
| GCATACACTGTAATATTAAC+AGG | - | chr8_4:13676774-13676793 | None:intergenic | 30.0% | |
| GTAAAATTAATGCTAGAGAG+AGG | - | chr8_4:13676934-13676953 | None:intergenic | 30.0% | |
| ! | AATTTTACATGTCGTACTCT+TGG | + | chr8_4:13676946-13676965 | Msa1314660:intron | 30.0% |
| AAAGAGAATACTGAATGTTG+TGG | - | chr8_4:13677003-13677022 | None:intergenic | 30.0% | |
| !! | ATCTTAGATGATTTTTAGGG+TGG | + | chr8_4:13677232-13677251 | Msa1314660:intron | 30.0% |
| !! | ATGTTGTTTCTCGTAAATAG+AGG | + | chr8_4:13677314-13677333 | Msa1314660:intron | 30.0% |
| ! | CCAACATTACTTAGATTTTG+AGG | - | chr8_4:13677425-13677444 | None:intergenic | 30.0% |
| CCTCAAAATCTAAGTAATGT+TGG | + | chr8_4:13677422-13677441 | Msa1314660:intron | 30.0% | |
| ! | AAAGTTTGGGACTAATTTGA+TGG | - | chr8_4:13677676-13677695 | None:intergenic | 30.0% |
| AATTAGTCCCAAACTTTGTA+AGG | + | chr8_4:13677679-13677698 | Msa1314660:intron | 30.0% | |
| AATTTCCGAGACTTATTTGA+CGG | - | chr8_4:13677707-13677726 | None:intergenic | 30.0% | |
| GATACCAAGTGGTTAAATAT+AGG | - | chr8_4:13677779-13677798 | None:intergenic | 30.0% | |
| AACGAGTAAACTACCAAATT+CGG | - | chr8_4:13677943-13677962 | None:intergenic | 30.0% | |
| ! | TGATTTTCTTCAGAATGTTG+AGG | + | chr8_4:13678043-13678062 | Msa1314660:intron | 30.0% |
| AAGTACTCTTGAGAAAACAA+AGG | - | chr8_4:13678151-13678170 | None:intergenic | 30.0% | |
| AACTCAAACTCTAACACAAT+CGG | - | chr8_4:13678242-13678261 | None:intergenic | 30.0% | |
| !! | TTTTTGATTCCTGAAAGAAG+AGG | + | chr8_4:13678260-13678279 | Msa1314660:intron | 30.0% |
| TATAATTACGGTTGCAATTG+TGG | - | chr8_4:13678419-13678438 | None:intergenic | 30.0% | |
| ! | CTAAAGTGGAAATTTTGTCT+TGG | - | chr8_4:13679067-13679086 | None:intergenic | 30.0% |
| CAAGACAAAATTTCCACTTT+AGG | + | chr8_4:13679065-13679084 | Msa1314660:intron | 30.0% | |
| AATCTCAAAAATCGAAGTCA+AGG | + | chr8_4:13679622-13679641 | Msa1314660:CDS | 30.0% | |
| ! | AAAATGTTACTGGTTGGATA+AGG | + | chr8_4:13679731-13679750 | Msa1314660:three_prime_UTR | 30.0% |
| ! | AAATGTTACTGGTTGGATAA+GGG | + | chr8_4:13679732-13679751 | Msa1314660:three_prime_UTR | 30.0% |
| CTATATGATCTCAGAAAACA+GGG | - | chr8_4:13679821-13679840 | None:intergenic | 30.0% | |
| ! | GAAAGTGTGAAAACAGAAAA+TGG | + | chr8_4:13679841-13679860 | Msa1314660:three_prime_UTR | 30.0% |
| !! | TTTCTTTTCAGGACCAAAAG+AGG | + | chr8_4:13673289-13673308 | Msa1314660:intron | 35.0% |
| CATACGTAATCTACATTGGT+AGG | + | chr8_4:13673493-13673512 | Msa1314660:intron | 35.0% | |
| GTTTATTTGCCTTGCTTTCT+TGG | - | chr8_4:13673785-13673804 | None:intergenic | 35.0% | |
| ! | CCACCTAAGCAAATTGTTTT+TGG | - | chr8_4:13673819-13673838 | None:intergenic | 35.0% |
| ! | CCAAAAACAATTTGCTTAGG+TGG | + | chr8_4:13673816-13673835 | Msa1314660:intron | 35.0% |
| !!! | AATGTTGTTTTGGTTATGCC+TGG | - | chr8_4:13674020-13674039 | None:intergenic | 35.0% |
| GGTTAGAATTGAAGCCATTT+GGG | - | chr8_4:13674046-13674065 | None:intergenic | 35.0% | |
| TGGCAATATTTCAACACCAT+GGG | - | chr8_4:13674123-13674142 | None:intergenic | 35.0% | |
| TTGGCAATATTTCAACACCA+TGG | - | chr8_4:13674124-13674143 | None:intergenic | 35.0% | |
| ! | GTTAATGTTGGAAGTGTAGT+TGG | - | chr8_4:13674143-13674162 | None:intergenic | 35.0% |
| AGTGGAACCATAGTTAATGT+TGG | - | chr8_4:13674155-13674174 | None:intergenic | 35.0% | |
| ACATGGGAAATTAACACCTT+GGG | - | chr8_4:13674227-13674246 | None:intergenic | 35.0% | |
| AACATGGGAAATTAACACCT+TGG | - | chr8_4:13674228-13674247 | None:intergenic | 35.0% | |
| ! | TTTTCTTATGGTTGCAGTGA+TGG | + | chr8_4:13674778-13674797 | Msa1314660:intron | 35.0% |
| TTTCTTATGGTTGCAGTGAT+GGG | + | chr8_4:13674779-13674798 | Msa1314660:intron | 35.0% | |
| CTGAAAATGTCTTGTACCTA+TGG | - | chr8_4:13674864-13674883 | None:intergenic | 35.0% | |
| GTCCAACATTTGCAACTTAA+AGG | - | chr8_4:13675194-13675213 | None:intergenic | 35.0% | |
| ACATGACGGTTGTATCTTAA+GGG | - | chr8_4:13675305-13675324 | None:intergenic | 35.0% | |
| AACATGACGGTTGTATCTTA+AGG | - | chr8_4:13675306-13675325 | None:intergenic | 35.0% | |
| ACCCAAAAAGGACCAAAAAT+AGG | + | chr8_4:13675483-13675502 | Msa1314660:intron | 35.0% | |
| !!! | CCCTATTTTTGGTCCTTTTT+GGG | - | chr8_4:13675487-13675506 | None:intergenic | 35.0% |
| CCCAAAAAGGACCAAAAATA+GGG | + | chr8_4:13675484-13675503 | Msa1314660:intron | 35.0% | |
| !!! | ACCCTATTTTTGGTCCTTTT+TGG | - | chr8_4:13675488-13675507 | None:intergenic | 35.0% |
| TAGCCTAATAGTTGATTGTG+AGG | - | chr8_4:13676126-13676145 | None:intergenic | 35.0% | |
| CACAAAGTCAAATACATTGG+TGG | - | chr8_4:13676306-13676325 | None:intergenic | 35.0% | |
| CAGCACAAAGTCAAATACAT+TGG | - | chr8_4:13676309-13676328 | None:intergenic | 35.0% | |
| TTGACTCTGTATGCTTGTTT+GGG | - | chr8_4:13676704-13676723 | None:intergenic | 35.0% | |
| AAAGCTTTCATTCAACCCAA+TGG | + | chr8_4:13676844-13676863 | Msa1314660:intron | 35.0% | |
| TTAATGCTAGAGAGAGGAAA+TGG | - | chr8_4:13676928-13676947 | None:intergenic | 35.0% | |
| AAGATGAGATGAGGGTAAAA+AGG | - | chr8_4:13677027-13677046 | None:intergenic | 35.0% | |
| TTGGAAGTAAGATGAGATGA+GGG | - | chr8_4:13677035-13677054 | None:intergenic | 35.0% | |
| TTTGGAAGTAAGATGAGATG+AGG | - | chr8_4:13677036-13677055 | None:intergenic | 35.0% | |
| CATAGTACTATGTATCCTCA+CGG | + | chr8_4:13677339-13677358 | Msa1314660:intron | 35.0% | |
| GCTTTCAGAAGGTCTAATAT+GGG | + | chr8_4:13677837-13677856 | Msa1314660:intron | 35.0% | |
| AAATTCGGCCCGAATTTATA+GGG | - | chr8_4:13677928-13677947 | None:intergenic | 35.0% | |
| CAAATTCAACTTTGGCAAGT+TGG | + | chr8_4:13677984-13678003 | Msa1314660:intron | 35.0% | |
| TCTTCAGAATGTTGAGGAAA+TGG | + | chr8_4:13678049-13678068 | Msa1314660:intron | 35.0% | |
| CTTCTTAAGTCAGCAATACA+AGG | - | chr8_4:13678095-13678114 | None:intergenic | 35.0% | |
| !! | TGTATTGCTGACTTAAGAAG+TGG | + | chr8_4:13678095-13678114 | Msa1314660:CDS | 35.0% |
| !! | CAAGAGTACTTCTGAAGAAA+AGG | + | chr8_4:13678160-13678179 | Msa1314660:CDS | 35.0% |
| ACTCAAACTCTAACACAATC+GGG | - | chr8_4:13678241-13678260 | None:intergenic | 35.0% | |
| AAATAAGAACTCAGGCAAAC+AGG | - | chr8_4:13678533-13678552 | None:intergenic | 35.0% | |
| ! | TTTAGAAAAAGAAGGGTGCA+GGG | + | chr8_4:13678701-13678720 | Msa1314660:intron | 35.0% |
| AACCTTAACATGTGCCTTAA+GGG | - | chr8_4:13678973-13678992 | None:intergenic | 35.0% | |
| ACATGTTAAGCAACCTAAAG+TGG | - | chr8_4:13679081-13679100 | None:intergenic | 35.0% | |
| ! | ACTGATTCTTTCAGCATCTT+TGG | + | chr8_4:13679190-13679209 | Msa1314660:intron | 35.0% |
| AAACAACGCAACAATTGGAA+GGG | - | chr8_4:13679304-13679323 | None:intergenic | 35.0% | |
| CTTAGAGAATGCATTTGGAT+TGG | - | chr8_4:13679523-13679542 | None:intergenic | 35.0% | |
| CAATCCAAATGCATTCTCTA+AGG | + | chr8_4:13679521-13679540 | Msa1314660:CDS | 35.0% | |
| ATGTCCTTAGAGAATGCATT+TGG | - | chr8_4:13679528-13679547 | None:intergenic | 35.0% | |
| !!! | GAGGAAGTATTTTGTACTCT+TGG | - | chr8_4:13679587-13679606 | None:intergenic | 35.0% |
| ! | AATCGAAGTCAAGGCTTTAA+AGG | + | chr8_4:13679631-13679650 | Msa1314660:CDS | 35.0% |
| CTGAAGACATGTCATATTTC+AGG | - | chr8_4:13679758-13679777 | None:intergenic | 35.0% | |
| CCTATATGATCTCAGAAAAC+AGG | - | chr8_4:13679822-13679841 | None:intergenic | 35.0% | |
| !!! | CCTGTTTTCTGAGATCATAT+AGG | + | chr8_4:13679819-13679838 | Msa1314660:three_prime_UTR | 35.0% |
| ACAGAAAATGGATGCAAACA+AGG | + | chr8_4:13679853-13679872 | Msa1314660:three_prime_UTR | 35.0% | |
| !!! | ACGTTTTGGCCTTGATAGAA+AGG | - | chr8_4:13673727-13673746 | None:intergenic | 40.0% |
| AACTTGTCTCTAACCCAAAG+AGG | + | chr8_4:13673756-13673775 | Msa1314660:intron | 40.0% | |
| TTCTCAAGGTGGAAAAGCAA+CGG | - | chr8_4:13673892-13673911 | None:intergenic | 40.0% | |
| CGGTTAGAATTGAAGCCATT+TGG | - | chr8_4:13674047-13674066 | None:intergenic | 40.0% | |
| ATATTTCAACACCATGGGCA+GGG | - | chr8_4:13674118-13674137 | None:intergenic | 40.0% | |
| AATATTTCAACACCATGGGC+AGG | - | chr8_4:13674119-13674138 | None:intergenic | 40.0% | |
| !! | CACATGGCTCTGAAAAAAAG+TGG | - | chr8_4:13674173-13674192 | None:intergenic | 40.0% |
| !!! | CTTTTTTTCAGAGCCATGTG+AGG | + | chr8_4:13674173-13674192 | Msa1314660:intron | 40.0% |
| TCCAATGGTAATTCGGCTAA+TGG | + | chr8_4:13674260-13674279 | Msa1314660:intron | 40.0% | |
| TCCATTAGCCGAATTACCAT+TGG | - | chr8_4:13674264-13674283 | None:intergenic | 40.0% | |
| CTAGTTAATAACGCCGGAAT+AGG | - | chr8_4:13674296-13674315 | None:intergenic | 40.0% | |
| ! | TATGACGCGGCAATTTTTCT+CGG | + | chr8_4:13674463-13674482 | Msa1314660:intron | 40.0% |
| TTCATAACCAATGCCACCTT+TGG | + | chr8_4:13674502-13674521 | Msa1314660:intron | 40.0% | |
| TTCTTATGGTTGCAGTGATG+GGG | + | chr8_4:13674780-13674799 | Msa1314660:intron | 40.0% | |
| ATATTCCTGTCACTATCTGC+TGG | + | chr8_4:13674808-13674827 | Msa1314660:intron | 40.0% | |
| ATGTCTTGTACCTATGGTCA+TGG | - | chr8_4:13674858-13674877 | None:intergenic | 40.0% | |
| ! | AGCTTTTAATGACAGCCACT+GGG | + | chr8_4:13674882-13674901 | Msa1314660:intron | 40.0% |
| TTACAGGGACTAAAAGTCGA+AGG | + | chr8_4:13675914-13675933 | Msa1314660:intron | 40.0% | |
| CGTCCTCACAATCAACTATT+AGG | + | chr8_4:13676120-13676139 | Msa1314660:intron | 40.0% | |
| TTTCCCATGGGATATTAGCA+GGG | - | chr8_4:13676647-13676666 | None:intergenic | 40.0% | |
| ! | TTTTCCCATGGGATATTAGC+AGG | - | chr8_4:13676648-13676667 | None:intergenic | 40.0% |
| ! | GTTGACTCTGTATGCTTGTT+TGG | - | chr8_4:13676705-13676724 | None:intergenic | 40.0% |
| GAGGAAAATGGCATTCCATT+GGG | - | chr8_4:13676862-13676881 | None:intergenic | 40.0% | |
| AGAGGAAAATGGCATTCCAT+TGG | - | chr8_4:13676863-13676882 | None:intergenic | 40.0% | |
| ! | CTAAGAGGTACAGAGGAAAA+TGG | - | chr8_4:13676874-13676893 | None:intergenic | 40.0% |
| TGGGGTAAAGTCAAGTAATG+GGG | - | chr8_4:13676897-13676916 | None:intergenic | 40.0% | |
| GTGGGGTAAAGTCAAGTAAT+GGG | - | chr8_4:13676898-13676917 | None:intergenic | 40.0% | |
| GTTTACTCGCAAACAAACCT+CGG | - | chr8_4:13677654-13677673 | None:intergenic | 40.0% | |
| GGTCCCTATATTTAACCACT+TGG | + | chr8_4:13677772-13677791 | Msa1314660:intron | 40.0% | |
| GGCTTTCAGAAGGTCTAATA+TGG | + | chr8_4:13677836-13677855 | Msa1314660:intron | 40.0% | |
| !! | TTGAGAGCGCCCTATAAATT+CGG | + | chr8_4:13677916-13677935 | Msa1314660:intron | 40.0% |
| CAAATTCGGCCCGAATTTAT+AGG | - | chr8_4:13677929-13677948 | None:intergenic | 40.0% | |
| CTATAAATTCGGGCCGAATT+TGG | + | chr8_4:13677927-13677946 | Msa1314660:intron | 40.0% | |
| ACTTAAGAAGTGGTCCTTGT+GGG | + | chr8_4:13678105-13678124 | Msa1314660:CDS | 40.0% | |
| TCTGAGAATTGAAACCCACA+AGG | - | chr8_4:13678122-13678141 | None:intergenic | 40.0% | |
| TTGTGGGTTTCAATTCTCAG+AGG | + | chr8_4:13678121-13678140 | Msa1314660:CDS | 40.0% | |
| CTGTATCTACCTCTTCTTTC+AGG | - | chr8_4:13678272-13678291 | None:intergenic | 40.0% | |
| TGATTTCGCAGTCTCAATCA+CGG | + | chr8_4:13678450-13678469 | Msa1314660:intron | 40.0% | |
| TCTTTGTTGCAAGGCTCTTA+GGG | - | chr8_4:13678508-13678527 | None:intergenic | 40.0% | |
| ! | GTTTAGAAAAAGAAGGGTGC+AGG | + | chr8_4:13678700-13678719 | Msa1314660:intron | 40.0% |
| ! | TTAGAAAAAGAAGGGTGCAG+GGG | + | chr8_4:13678702-13678721 | Msa1314660:intron | 40.0% |
| GAACCTTAACATGTGCCTTA+AGG | - | chr8_4:13678974-13678993 | None:intergenic | 40.0% | |
| TTGCTTAACATGTGCCCTAA+GGG | + | chr8_4:13679088-13679107 | Msa1314660:intron | 40.0% | |
| ! | AATGCTAACTTGTGCCCTTA+GGG | - | chr8_4:13679105-13679124 | None:intergenic | 40.0% |
| ! | AAATGCTAACTTGTGCCCTT+AGG | - | chr8_4:13679106-13679125 | None:intergenic | 40.0% |
| AACAACGCAACAATTGGAAG+GGG | - | chr8_4:13679303-13679322 | None:intergenic | 40.0% | |
| CAAACAACGCAACAATTGGA+AGG | - | chr8_4:13679305-13679324 | None:intergenic | 40.0% | |
| CTTCCAATTGTTGCGTTGTT+TGG | + | chr8_4:13679303-13679322 | Msa1314660:intron | 40.0% | |
| ! | TGCTATTGCTCCAATTTTGC+AGG | + | chr8_4:13679449-13679468 | Msa1314660:intron | 40.0% |
| ! | GCTATTGCTCCAATTTTGCA+GGG | + | chr8_4:13679450-13679469 | Msa1314660:intron | 40.0% |
| CAACTCTGCAGAGCAATAAA+TGG | - | chr8_4:13679492-13679511 | None:intergenic | 40.0% | |
| ! | GCATTCTCTAAGGACATTCT+TGG | + | chr8_4:13679531-13679550 | Msa1314660:CDS | 40.0% |
| ACAAAATACTTCCTCCAGAC+TGG | + | chr8_4:13679592-13679611 | Msa1314660:CDS | 40.0% | |
| GCTTTCTTGGTCTCCTCTTT+GGG | - | chr8_4:13673772-13673791 | None:intergenic | 45.0% | |
| TGCTTTCTTGGTCTCCTCTT+TGG | - | chr8_4:13673773-13673792 | None:intergenic | 45.0% | |
| AAGAGGAGACCAAGAAAGCA+AGG | + | chr8_4:13673773-13673792 | Msa1314660:intron | 45.0% | |
| CACCATTCTTAGTTGTCCCA+AGG | + | chr8_4:13674208-13674227 | Msa1314660:intron | 45.0% | |
| CACCTTGGGACAACTAAGAA+TGG | - | chr8_4:13674213-13674232 | None:intergenic | 45.0% | |
| ! | TATCCGACTTGAGATGTCAG+AGG | + | chr8_4:13674439-13674458 | Msa1314660:intron | 45.0% |
| TAGCCTCTGACATCTCAAGT+CGG | - | chr8_4:13674445-13674464 | None:intergenic | 45.0% | |
| !! | TTGATATTGGATTGGCCGTC+TGG | + | chr8_4:13674735-13674754 | Msa1314660:intron | 45.0% |
| CCAAAAAATAACCGGCCAGA+CGG | - | chr8_4:13674753-13674772 | None:intergenic | 45.0% | |
| ATTGTCCAGCAGATAGTGAC+AGG | - | chr8_4:13674816-13674835 | None:intergenic | 45.0% | |
| AAACATGGCTCCATGACCAT+AGG | + | chr8_4:13674845-13674864 | Msa1314660:intron | 45.0% | |
| ! | CAGCTTTTAATGACAGCCAC+TGG | + | chr8_4:13674881-13674900 | Msa1314660:intron | 45.0% |
| ! | TTTTAATGACAGCCACTGGG+AGG | + | chr8_4:13674885-13674904 | Msa1314660:intron | 45.0% |
| TCTGTAGATGAGTGACCTAG+TGG | + | chr8_4:13676033-13676052 | Msa1314660:intron | 45.0% | |
| ACTCACAAATGGAGGGAGAA+GGG | + | chr8_4:13676060-13676079 | Msa1314660:intron | 45.0% | |
| GAACCCTGCTAATATCCCAT+GGG | + | chr8_4:13676641-13676660 | Msa1314660:intron | 45.0% | |
| ! | AGTCAAGTAATGGGGCTAAG+AGG | - | chr8_4:13676889-13676908 | None:intergenic | 45.0% |
| CGTGGGGTAAAGTCAAGTAA+TGG | - | chr8_4:13676899-13676918 | None:intergenic | 45.0% | |
| ! | CTAGAGAGAGGAAATGGACT+GGG | - | chr8_4:13676922-13676941 | None:intergenic | 45.0% |
| !!! | GCAAACAAACCTCGGTGTTT+TGG | - | chr8_4:13677646-13677665 | None:intergenic | 45.0% |
| GACGGAGCCTTACAAAGTTT+GGG | - | chr8_4:13677689-13677708 | None:intergenic | 45.0% | |
| TGACGGAGCCTTACAAAGTT+TGG | - | chr8_4:13677690-13677709 | None:intergenic | 45.0% | |
| AGGCTCCGTCAAATAAGTCT+CGG | + | chr8_4:13677699-13677718 | Msa1314660:intron | 45.0% | |
| AGGACTAACGTGATACCAAG+TGG | - | chr8_4:13677790-13677809 | None:intergenic | 45.0% | |
| TTTGGTCAAGGGCTTTCAGA+AGG | + | chr8_4:13677826-13677845 | Msa1314660:intron | 45.0% | |
| ! | TTTATAGGGCGCTCTCAAAC+AGG | - | chr8_4:13677914-13677933 | None:intergenic | 45.0% |
| !! | TGAGAGCGCCCTATAAATTC+GGG | + | chr8_4:13677917-13677936 | Msa1314660:intron | 45.0% |
| GACTTAAGAAGTGGTCCTTG+TGG | + | chr8_4:13678104-13678123 | Msa1314660:CDS | 45.0% | |
| TAGGGTGCAAACAAAGCGAA+CGG | - | chr8_4:13678490-13678509 | None:intergenic | 45.0% | |
| CTCTTTGTTGCAAGGCTCTT+AGG | - | chr8_4:13678509-13678528 | None:intergenic | 45.0% | |
| CTAAGAGCCTTGCAACAAAG+AGG | + | chr8_4:13678507-13678526 | Msa1314660:intron | 45.0% | |
| AAACAGGCCTCTTTGTTGCA+AGG | - | chr8_4:13678517-13678536 | None:intergenic | 45.0% | |
| AATGGCAGTGGTAGACTAGA+GGG | + | chr8_4:13678727-13678746 | Msa1314660:intron | 45.0% | |
| ! | CATGCTAACTTGTGCCCTTA+AGG | + | chr8_4:13678956-13678975 | Msa1314660:intron | 45.0% |
| TGCCCTTAAGGCACATGTTA+AGG | + | chr8_4:13678968-13678987 | Msa1314660:intron | 45.0% | |
| GTTGCTTAACATGTGCCCTA+AGG | + | chr8_4:13679087-13679106 | Msa1314660:intron | 45.0% | |
| ! | TGGCTTGGAACCTAACAACT+CGG | + | chr8_4:13679258-13679277 | Msa1314660:intron | 45.0% |
| ACCTAACAACTCGGAAGTTG+TGG | + | chr8_4:13679267-13679286 | Msa1314660:intron | 45.0% | |
| ACCACAACTTCCGAGTTGTT+AGG | - | chr8_4:13679271-13679290 | None:intergenic | 45.0% | |
| TGTTTGGCGCTTCTACAGAA+TGG | + | chr8_4:13679319-13679338 | Msa1314660:intron | 45.0% | |
| TGCTCTGCAGAGTTGCATAA+AGG | + | chr8_4:13679497-13679516 | Msa1314660:CDS | 45.0% | |
| TCTTGGCGAAGATGAAAGCA+AGG | + | chr8_4:13679548-13679567 | Msa1314660:CDS | 45.0% | |
| CGAAGATGAAAGCAAGGAGT+CGG | + | chr8_4:13679554-13679573 | Msa1314660:CDS | 45.0% | |
| TGAGATTCCTTAGACCAGTC+TGG | - | chr8_4:13679609-13679628 | None:intergenic | 45.0% | |
| !!! | AAAAAATTCTAATTTTTTTT+AGG | + | chr8_4:13675794-13675813 | Msa1314660:intron | 5.0% |
| !! | ACAAAAATTAAATTAAAAAT+AGG | + | chr8_4:13675867-13675886 | Msa1314660:intron | 5.0% |
| !! | CAAAAATTAAATTAAAAATA+GGG | + | chr8_4:13675868-13675887 | Msa1314660:intron | 5.0% |
| !!! | AAGATTTTTTTATATAATTA+CGG | - | chr8_4:13678431-13678450 | None:intergenic | 5.0% |
| !!! | ATAAATATTTTTACTATATA+TGG | - | chr8_4:13678996-13679015 | None:intergenic | 5.0% |
| CAAGGTGGAAAAGCAACGGA+TGG | - | chr8_4:13673888-13673907 | None:intergenic | 50.0% | |
| AGAGCAAGAGCTTCTCAAGG+TGG | - | chr8_4:13673903-13673922 | None:intergenic | 50.0% | |
| GAGAGAGCAAGAGCTTCTCA+AGG | - | chr8_4:13673906-13673925 | None:intergenic | 50.0% | |
| GCAACAAGTTGTGCCTCACA+TGG | - | chr8_4:13674189-13674208 | None:intergenic | 50.0% | |
| TAACGCCGGAATAGGTAGCA+CGG | - | chr8_4:13674288-13674307 | None:intergenic | 50.0% | |
| ! | TCAAAGCGCTATTTCAGCCG+TGG | - | chr8_4:13674354-13674373 | None:intergenic | 50.0% |
| AGATGTCAGAGGCTATGACG+CGG | + | chr8_4:13674450-13674469 | Msa1314660:intron | 50.0% | |
| AATGCCACCTTTGGCACAAC+CGG | + | chr8_4:13674511-13674530 | Msa1314660:intron | 50.0% | |
| !!! | CCGTCTGGCCGGTTATTTTT+TGG | + | chr8_4:13674750-13674769 | Msa1314660:intron | 50.0% |
| CATTGCCAAATTCCTCCCAG+TGG | - | chr8_4:13674900-13674919 | None:intergenic | 50.0% | |
| CATTTGTGAGTGTGGCCACT+AGG | - | chr8_4:13676051-13676070 | None:intergenic | 50.0% | |
| CTAGTGGCCACACTCACAAA+TGG | + | chr8_4:13676049-13676068 | Msa1314660:intron | 50.0% | |
| TGGCCACACTCACAAATGGA+GGG | + | chr8_4:13676053-13676072 | Msa1314660:intron | 50.0% | |
| TCTCCCTCCATTTGTGAGTG+TGG | - | chr8_4:13676059-13676078 | None:intergenic | 50.0% | |
| CACTCACAAATGGAGGGAGA+AGG | + | chr8_4:13676059-13676078 | Msa1314660:intron | 50.0% | |
| CGAACCCTGCTAATATCCCA+TGG | + | chr8_4:13676640-13676659 | Msa1314660:intron | 50.0% | |
| ! | AATGGGGCTAAGAGGTACAG+AGG | - | chr8_4:13676881-13676900 | None:intergenic | 50.0% |
| GCTAGAGAGAGGAAATGGAC+TGG | - | chr8_4:13676923-13676942 | None:intergenic | 50.0% | |
| GGTTGAGACGATGACACACT+TGG | + | chr8_4:13677360-13677379 | Msa1314660:intron | 50.0% | |
| AGTGTGACGTGCGACTGATT+TGG | + | chr8_4:13678309-13678328 | Msa1314660:intron | 50.0% | |
| CAATGGCAGTGGTAGACTAG+AGG | + | chr8_4:13678726-13678745 | Msa1314660:intron | 50.0% | |
| !! | GTGGTAGACTAGAGGGCATT+TGG | + | chr8_4:13678734-13678753 | Msa1314660:intron | 50.0% |
| CAGCAGATGCTGAGTGGTAA+TGG | + | chr8_4:13678760-13678779 | Msa1314660:intron | 50.0% | |
| !! | CAGATGCTGAGTGGTAATGG+TGG | + | chr8_4:13678763-13678782 | Msa1314660:intron | 50.0% |
| !! | ATGCTGAGTGGTAATGGTGG+AGG | + | chr8_4:13678766-13678785 | Msa1314660:intron | 50.0% |
| GCGCCAAACAACGCAACAAT+TGG | - | chr8_4:13679309-13679328 | None:intergenic | 50.0% | |
| CAGTCTGAGCCCTGCAAAAT+TGG | - | chr8_4:13679462-13679481 | None:intergenic | 50.0% | |
| !! | ACTTCCTCCAGACTGGTCTA+AGG | + | chr8_4:13679599-13679618 | Msa1314660:CDS | 50.0% |
| GATTCCTTAGACCAGTCTGG+AGG | - | chr8_4:13679606-13679625 | None:intergenic | 50.0% | |
| GCACAATATGACCCTGCCCA+TGG | + | chr8_4:13674104-13674123 | Msa1314660:intron | 55.0% | |
| TGGACCCGTGCTACCTATTC+CGG | + | chr8_4:13674280-13674299 | Msa1314660:intron | 55.0% | |
| AACGCCGGAATAGGTAGCAC+GGG | - | chr8_4:13674287-13674306 | None:intergenic | 55.0% | |
| GGTTGTGCCAAAGGTGGCAT+TGG | - | chr8_4:13674512-13674531 | None:intergenic | 55.0% | |
| CTAGTGACCGGTTGTGCCAA+AGG | - | chr8_4:13674521-13674540 | None:intergenic | 55.0% | |
| !! | TATTGGATTGGCCGTCTGGC+CGG | + | chr8_4:13674739-13674758 | Msa1314660:intron | 55.0% |
| GACAGCCACTGGGAGGAATT+TGG | + | chr8_4:13674892-13674911 | Msa1314660:intron | 55.0% | |
| GTGGCCACACTCACAAATGG+AGG | + | chr8_4:13676052-13676071 | Msa1314660:intron | 55.0% | |
| CACAAATGGAGGGAGAAGGG+TGG | + | chr8_4:13676063-13676082 | Msa1314660:intron | 55.0% | |
| !! | AGAGGAAATGGACTGGGCGT+GGG | - | chr8_4:13676916-13676935 | None:intergenic | 55.0% |
| GTGTCATCGTCTCAACCGTG+AGG | - | chr8_4:13677357-13677376 | None:intergenic | 55.0% | |
| !! | CGTGCGACTGATTTGGCTGT+TGG | + | chr8_4:13678316-13678335 | Msa1314660:intron | 55.0% |
| ! | AAGAAGGGTGCAGGGGTCAA+TGG | + | chr8_4:13678709-13678728 | Msa1314660:intron | 55.0% |
| TGGTGGAGGTTATCTGCTGC+TGG | + | chr8_4:13678780-13678799 | Msa1314660:intron | 55.0% | |
| GTGACCGGTTGTGCCAAAGG+TGG | - | chr8_4:13674518-13674537 | None:intergenic | 60.0% | |
| !! | GAGGAAATGGACTGGGCGTG+GGG | - | chr8_4:13676915-13676934 | None:intergenic | 60.0% |
| !! | GAGAGGAAATGGACTGGGCG+TGG | - | chr8_4:13676917-13676936 | None:intergenic | 60.0% |
| CGCAGTCTCAATCACGGCTG+CGG | + | chr8_4:13678456-13678475 | Msa1314660:intron | 60.0% | |
| GCAGTCTCAATCACGGCTGC+GGG | + | chr8_4:13678457-13678476 | Msa1314660:intron | 60.0% | |
| TGGCAGCAGCAGATGCTGAG+TGG | + | chr8_4:13678754-13678773 | Msa1314660:intron | 60.0% | |
| TCTCAATCACGGCTGCGGGC+TGG | + | chr8_4:13678461-13678480 | Msa1314660:intron | 65.0% | |
| GGTGCAGGGGTCAATGGCAG+TGG | + | chr8_4:13678715-13678734 | Msa1314660:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 13673222 | 13679877 | 13673222 | ID=Msa1314660;Name=Msa1314660 |
| chr8_4 | mRNA | 13673222 | 13679877 | 13673222 | ID=Msa1314660-mRNA-1;Parent=Msa1314660;Name=Msa1314660-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.25|0.2|0.4|1|1|5|227|108 |
| chr8_4 | exon | 13673222 | 13673227 | 13673222 | ID=Msa1314660-mRNA-1:exon:5074;Parent=Msa1314660-mRNA-1 |
| chr8_4 | exon | 13674184 | 13674189 | 13674184 | ID=Msa1314660-mRNA-1:exon:5075;Parent=Msa1314660-mRNA-1 |
| chr8_4 | exon | 13674258 | 13674266 | 13674258 | ID=Msa1314660-mRNA-1:exon:5076;Parent=Msa1314660-mRNA-1 |
| chr8_4 | exon | 13678056 | 13678181 | 13678056 | ID=Msa1314660-mRNA-1:exon:5077;Parent=Msa1314660-mRNA-1 |
| chr8_4 | exon | 13679471 | 13679877 | 13679471 | ID=Msa1314660-mRNA-1:exon:5078;Parent=Msa1314660-mRNA-1 |
| chr8_4 | CDS | 13673222 | 13673227 | 13673222 | ID=Msa1314660-mRNA-1:cds;Parent=Msa1314660-mRNA-1 |
| chr8_4 | CDS | 13674184 | 13674189 | 13674184 | ID=Msa1314660-mRNA-1:cds;Parent=Msa1314660-mRNA-1 |
| chr8_4 | CDS | 13674258 | 13674266 | 13674258 | ID=Msa1314660-mRNA-1:cds;Parent=Msa1314660-mRNA-1 |
| chr8_4 | CDS | 13678056 | 13678181 | 13678056 | ID=Msa1314660-mRNA-1:cds;Parent=Msa1314660-mRNA-1 |
| chr8_4 | CDS | 13679471 | 13679650 | 13679471 | ID=Msa1314660-mRNA-1:cds;Parent=Msa1314660-mRNA-1 |
| chr8_4 | three_prime_UTR | 13679651 | 13679877 | 13679651 | ID=Msa1314660-mRNA-1:three_prime_utr;Parent=Msa1314660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
