Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315190 | XP_003627367.2 | 96.186 | 472 | 18 | 0 | 1 | 472 | 1 | 472 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315190 | sp|Q338N2|C3H62_ORYSJ | 56.398 | 211 | 90 | 2 | 85 | 295 | 118 | 326 | 1.56e-69 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315190 | A0A396GLI1 | 96.186 | 472 | 18 | 0 | 1 | 472 | 1 | 472 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1315190 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1315190 | Msa1315220 | 0.984772 | 1.530328e-161 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315190 | MtrunA17_Chr8g0344621 | 96.186 | 472 | 18 | 0 | 1 | 472 | 1 | 472 | 0.0 | 938 |
| Msa1315190 | MtrunA17_Chr5g0402541 | 56.633 | 196 | 81 | 3 | 82 | 275 | 67 | 260 | 3.22e-68 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315190 | AT5G66840.2 | 47.177 | 248 | 117 | 6 | 89 | 334 | 79 | 314 | 2.89e-64 | 217 |
| Msa1315190 | AT5G66840.1 | 47.177 | 248 | 117 | 6 | 89 | 334 | 79 | 314 | 2.89e-64 | 217 |
Find 126 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCTGGATAGATATTT+TGG | 0.122994 | 8_4:-14459710 | Msa1315190:three_prime_UTR |
| CCTTCACCCCTTACTGATTA+AGG | 0.202973 | 8_4:-14460771 | Msa1315190:CDS |
| AAAAGTTCAGAAAATAATTA+AGG | 0.207744 | 8_4:-14463207 | Msa1315190:CDS |
| TGTTGATAGCTTTCTCTGTT+TGG | 0.240306 | 8_4:+14459912 | None:intergenic |
| GAATCGTCGCATTCTGAATA+TGG | 0.258910 | 8_4:+14463484 | None:intergenic |
| CACATTCAGGATCTCCAAAA+AGG | 0.266194 | 8_4:-14460390 | Msa1315190:intron |
| CTCCATTGGTGAATCTTGTT+TGG | 0.266402 | 8_4:+14463543 | None:intergenic |
| GTTGATAGCTTTCTCTGTTT+GGG | 0.266738 | 8_4:+14459913 | None:intergenic |
| TTTCGACCGTTGTAGAATTA+AGG | 0.267573 | 8_4:+14463601 | None:intergenic |
| GAAAATCAATGAAGGAAAAT+AGG | 0.288860 | 8_4:-14460520 | Msa1315190:intron |
| TCAGACCAGCTCAGAAATTC+TGG | 0.290575 | 8_4:-14460158 | Msa1315190:CDS |
| GCCCGTGGAAGGTGCCATTT+TGG | 0.299361 | 8_4:-14459867 | Msa1315190:CDS |
| ATTTGCAGTTATCTCCAAAA+TGG | 0.321401 | 8_4:+14459853 | None:intergenic |
| AAGAATGGTCTGAGGCTAAC+TGG | 0.324632 | 8_4:-14462205 | Msa1315190:CDS |
| TCAAAGTCTTCAACCGATAT+AGG | 0.329078 | 8_4:+14460741 | None:intergenic |
| TTCTTCAAGCATGTCGAAAT+CGG | 0.336462 | 8_4:+14463450 | None:intergenic |
| CTTGTTCTTGATTGAGAGAT+TGG | 0.343536 | 8_4:+14463411 | None:intergenic |
| AGATTCTCGAACTGTCATAA+TGG | 0.357899 | 8_4:-14460183 | Msa1315190:CDS |
| GCTGGTTTATTTACAATTGC+CGG | 0.361821 | 8_4:+14460236 | None:intergenic |
| CGCTGTTCAGTTACAGCTGC+TGG | 0.367136 | 8_4:+14460218 | None:intergenic |
| CACACTTATCCAGCGTATAA+AGG | 0.370761 | 8_4:-14462173 | Msa1315190:CDS |
| AAACCACTTTGTTCCGCGTT+CGG | 0.372875 | 8_4:-14459964 | Msa1315190:CDS |
| TGGCTGCCATTGAATTGATT+TGG | 0.377572 | 8_4:+14463563 | None:intergenic |
| CAAGCAACAGCATACATTTA+CGG | 0.378848 | 8_4:-14461280 | Msa1315190:intron |
| GTGTAAAATTATCCTTTCTC+TGG | 0.379908 | 8_4:-14459723 | Msa1315190:three_prime_UTR |
| CACTTGTCAAAGGCTTCCTT+TGG | 0.379911 | 8_4:+14460018 | None:intergenic |
| TCTGAGGCTAACTGGGAATA+AGG | 0.384184 | 8_4:-14462197 | Msa1315190:CDS |
| AAGGGGTGAAGGGGAGGGAG+AGG | 0.392273 | 8_4:+14460782 | None:intergenic |
| TGAATGTTGGGATGGAAATT+CGG | 0.395984 | 8_4:+14460271 | None:intergenic |
| CTTTCATTGCTGAGACAAAC+AGG | 0.396565 | 8_4:-14460052 | Msa1315190:CDS |
| TTTCAGCATAGTTGATGATA+AGG | 0.399534 | 8_4:-14463303 | Msa1315190:intron |
| AAATCACTTTGTTCCGCGTT+CGG | 0.400132 | 8_4:-14459994 | Msa1315190:CDS |
| ATCTCTCAGCAGTACTAGTT+GGG | 0.403360 | 8_4:+14460081 | None:intergenic |
| CTTCACCCCTTACTGATTAA+GGG | 0.415771 | 8_4:-14460770 | Msa1315190:CDS |
| CGGTGGACCACCGCCACTCC+TGG | 0.419904 | 8_4:+14461356 | None:intergenic |
| TGTGGCAAAAGGATTGTTGC+AGG | 0.420400 | 8_4:-14461333 | Msa1315190:CDS |
| AAAGTTCAGAAAATAATTAA+GGG | 0.424535 | 8_4:-14463206 | Msa1315190:intron |
| GATTCTCGAACTGTCATAAT+GGG | 0.429886 | 8_4:-14460182 | Msa1315190:CDS |
| CTTACACGGTTGAGAGACTA+AGG | 0.432484 | 8_4:-14459829 | Msa1315190:exon |
| TATCTCTCAGCAGTACTAGT+TGG | 0.435640 | 8_4:+14460080 | None:intergenic |
| TTCAGCATAGTTGATGATAA+GGG | 0.447797 | 8_4:-14463302 | Msa1315190:intron |
| GTTTCGACCCTTAATCAGTA+AGG | 0.452446 | 8_4:+14460763 | None:intergenic |
| GATCCCTTGCTAGGGCAGAC+AGG | 0.454561 | 8_4:-14460571 | Msa1315190:CDS |
| TCTTCAAGCATGTCGAAATC+GGG | 0.462655 | 8_4:+14463451 | None:intergenic |
| CAAAATATCTATCCAGAGAA+AGG | 0.468151 | 8_4:+14459711 | None:intergenic |
| TCCAAAATGGCACCTTCCAC+GGG | 0.469114 | 8_4:+14459866 | None:intergenic |
| GTGGTCCACCGTGTGGCAAA+AGG | 0.472781 | 8_4:-14461344 | Msa1315190:CDS |
| CTCCAAAATGGCACCTTCCA+CGG | 0.473630 | 8_4:+14459865 | None:intergenic |
| TTTAGAAATGGGAGGATGAA+GGG | 0.475468 | 8_4:-14460631 | Msa1315190:intron |
| AGACAGGGAAGCAAGGATAC+AGG | 0.477397 | 8_4:-14460555 | Msa1315190:CDS |
| CTTCCCTGTCTGCCCTAGCA+AGG | 0.477748 | 8_4:+14460567 | None:intergenic |
| TCAGTAAGGGGTGAAGGGGA+GGG | 0.489102 | 8_4:+14460777 | None:intergenic |
| TTAAGGGTCGAAACCTATAT+CGG | 0.489344 | 8_4:-14460754 | Msa1315190:CDS |
| TTCAGGATTATAAATGGTGG+AGG | 0.493103 | 8_4:-14462068 | Msa1315190:intron |
| TCGGTTGAAGACTTTGAGAC+AGG | 0.497659 | 8_4:-14460735 | Msa1315190:intron |
| TGGATGAATGTGATTGGAAC+TGG | 0.500067 | 8_4:+14460354 | None:intergenic |
| TCTGAACCAAATCAATTCAA+TGG | 0.502311 | 8_4:-14463569 | Msa1315190:exon |
| CATAGTTGATGATAAGGGTC+TGG | 0.506481 | 8_4:-14463297 | Msa1315190:CDS |
| TTGCAATGGATGAATGTGAT+TGG | 0.508041 | 8_4:+14460348 | None:intergenic |
| ATCAGTAAGGGGTGAAGGGG+AGG | 0.518183 | 8_4:+14460776 | None:intergenic |
| CGCATAGTGAAAGAAAGTTA+TGG | 0.518912 | 8_4:-14461309 | Msa1315190:CDS |
| AAGTGATTTGCACTTGTCAA+AGG | 0.519989 | 8_4:+14460008 | None:intergenic |
| AAGATGTATTTGAAGAAGAA+TGG | 0.520707 | 8_4:-14462220 | Msa1315190:CDS |
| ATGCAGGTGATGCATGCACC+GGG | 0.522264 | 8_4:-14461620 | Msa1315190:intron |
| ATGATTTCGTGAAGCTCCAT+TGG | 0.522647 | 8_4:+14463529 | None:intergenic |
| TAGTTGGGTTGTCTCTGTAA+TGG | 0.523341 | 8_4:+14460096 | None:intergenic |
| AATGGGAGGATGAAGGGAAA+AGG | 0.523988 | 8_4:-14460625 | Msa1315190:CDS |
| GATTGAAGTGCTGTGGAGCA+AGG | 0.525744 | 8_4:-14460813 | Msa1315190:CDS |
| ATAGCGTCCAGGAGTGGCGG+TGG | 0.529524 | 8_4:-14461363 | Msa1315190:CDS |
| CTTGATGCTCCTTTATACGC+TGG | 0.532687 | 8_4:+14462164 | None:intergenic |
| GGAAGCAAGGATACAGGAAA+AGG | 0.534990 | 8_4:-14460549 | Msa1315190:CDS |
| TTAGGTTCAACATAGCGTCC+AGG | 0.535937 | 8_4:-14461374 | Msa1315190:intron |
| TTCCCTGTCTGCCCTAGCAA+GGG | 0.536827 | 8_4:+14460568 | None:intergenic |
| AGCTTTGTGTTGAATTGTAA+AGG | 0.539427 | 8_4:-14462023 | Msa1315190:intron |
| CAATTCAACACAAAGCTATG+AGG | 0.540203 | 8_4:+14462029 | None:intergenic |
| CCTTAATCAGTAAGGGGTGA+AGG | 0.540298 | 8_4:+14460771 | None:intergenic |
| TGGATCGGATCCTTCAGATT+CGG | 0.541533 | 8_4:+14463504 | None:intergenic |
| TAAAGATAGCTCGCTAATTG+TGG | 0.542123 | 8_4:-14463663 | Msa1315190:five_prime_UTR |
| GGAGATAAGAAAATCAATGA+AGG | 0.544402 | 8_4:-14460528 | Msa1315190:CDS |
| ATCCCTTGCTAGGGCAGACA+GGG | 0.545866 | 8_4:-14460570 | Msa1315190:CDS |
| AGAATGGTCTGAGGCTAACT+GGG | 0.547559 | 8_4:-14462204 | Msa1315190:CDS |
| CAATCTCTCAATCAAGAACA+AGG | 0.549028 | 8_4:-14463410 | Msa1315190:CDS |
| TCAGGATTATAAATGGTGGA+GGG | 0.552104 | 8_4:-14462067 | Msa1315190:intron |
| TGTTGACAAAGCTGAATGTT+GGG | 0.553775 | 8_4:+14460259 | None:intergenic |
| CTTAATCAGTAAGGGGTGAA+GGG | 0.556388 | 8_4:+14460772 | None:intergenic |
| AATACAGTTGTTGTTTCTTG+AGG | 0.558283 | 8_4:+14460311 | None:intergenic |
| AATCACATTCATCCATTGCA+AGG | 0.561327 | 8_4:-14460346 | Msa1315190:CDS |
| TGAGATGAATGCACAAGTGT+TGG | 0.565055 | 8_4:-14463267 | Msa1315190:CDS |
| TATGCAGGTGATGCATGCAC+CGG | 0.565952 | 8_4:-14461621 | Msa1315190:intron |
| TTTCGACCCTTAATCAGTAA+GGG | 0.568427 | 8_4:+14460764 | None:intergenic |
| CAGGATTATAAATGGTGGAG+GGG | 0.571443 | 8_4:-14462066 | Msa1315190:CDS |
| TCAAGAACAAGGCAAAGAAA+CGG | 0.572702 | 8_4:-14463399 | Msa1315190:intron |
| CTCTCGGGGATCCCTTGCTA+GGG | 0.575799 | 8_4:-14460579 | Msa1315190:CDS |
| GTGTTGACAAAGCTGAATGT+TGG | 0.578190 | 8_4:+14460258 | None:intergenic |
| ATTGAAGTGCTGTGGAGCAA+GGG | 0.578962 | 8_4:-14460812 | Msa1315190:CDS |
| CTCAAACAAAACAACATCCC+CGG | 0.591505 | 8_4:+14461602 | None:intergenic |
| TTAATCAGTAAGGGGTGAAG+GGG | 0.595390 | 8_4:+14460773 | None:intergenic |
| CGTAAATGTATGCTGTTGCT+TGG | 0.595593 | 8_4:+14461281 | None:intergenic |
| GAGATTGGAGAAACTACGAT+GGG | 0.596765 | 8_4:+14463426 | None:intergenic |
| ACTGTTAGAGAAATTGAAAG+TGG | 0.598309 | 8_4:-14462251 | Msa1315190:CDS |
| CTAGGGCAGACAGGGAAGCA+AGG | 0.600937 | 8_4:-14460562 | Msa1315190:CDS |
| ATGACAGTTCGAGAATCTGT+AGG | 0.601874 | 8_4:+14460188 | None:intergenic |
| TGGTTTGCATTTGCCGAACG+CGG | 0.602529 | 8_4:+14459981 | None:intergenic |
| TTCAACACAAAGCTATGAGG+CGG | 0.603722 | 8_4:+14462032 | None:intergenic |
| GAAATCATCACCGAATCTGA+AGG | 0.611750 | 8_4:-14463514 | Msa1315190:CDS |
| AACATAGCGTCCAGGAGTGG+CGG | 0.611856 | 8_4:-14461366 | Msa1315190:CDS |
| TTCAACATAGCGTCCAGGAG+TGG | 0.613492 | 8_4:-14461369 | Msa1315190:CDS |
| TCAACACAAAGCTATGAGGC+GGG | 0.614292 | 8_4:+14462033 | None:intergenic |
| AAATCATCATCATCAAGAGA+AGG | 0.614555 | 8_4:+14463233 | None:intergenic |
| TTCGACCCTTAATCAGTAAG+GGG | 0.614930 | 8_4:+14460765 | None:intergenic |
| TTCAAACCTTAATTCTACAA+CGG | 0.615565 | 8_4:-14463607 | Msa1315190:five_prime_UTR |
| GTCGCATTCTGAATATGGAT+CGG | 0.616154 | 8_4:+14463489 | None:intergenic |
| TGATACAGATTGAAGTGCTG+TGG | 0.616244 | 8_4:-14460820 | Msa1315190:intron |
| TTTCCGAACGCGGAACAAAG+TGG | 0.622185 | 8_4:+14459961 | None:intergenic |
| GACAAAGCTGAATGTTGGGA+TGG | 0.627606 | 8_4:+14460263 | None:intergenic |
| ACATTCAGCTTTGTCAACAC+CGG | 0.627641 | 8_4:-14460255 | Msa1315190:CDS |
| GATAACTGCAAATTCTTACA+CGG | 0.628626 | 8_4:-14459843 | Msa1315190:CDS |
| CATAACTTTCTTTCACTATG+CGG | 0.640723 | 8_4:+14461310 | None:intergenic |
| GATGCATGAAAGCTTTGTAG+TGG | 0.643733 | 8_4:-14459806 | Msa1315190:three_prime_UTR |
| ACAGGAGAGCTTCTTACCAA+AGG | 0.644981 | 8_4:-14460034 | Msa1315190:CDS |
| AGAGATTGGAGAAACTACGA+TGG | 0.646170 | 8_4:+14463425 | None:intergenic |
| TTACACGGTTGAGAGACTAA+GGG | 0.671696 | 8_4:-14459828 | Msa1315190:exon |
| AGTGGCGGTGGTCCACCGTG+TGG | 0.672232 | 8_4:-14461351 | Msa1315190:CDS |
| AGCCAAACAAGATTCACCAA+TGG | 0.688618 | 8_4:-14463545 | Msa1315190:CDS |
| ATTTGAAGAAGAATGGTCTG+AGG | 0.702992 | 8_4:-14462213 | Msa1315190:CDS |
| TGCAGGTGATGCATGCACCG+GGG | 0.775103 | 8_4:-14461619 | Msa1315190:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCAAATTTTGATAAAT+GGG | + | chr8_4:14460023-14460042 | None:intergenic | 10.0% |
| !!! | AAAAATCAAATTTTGATAAA+TGG | + | chr8_4:14460024-14460043 | None:intergenic | 10.0% |
| !!! | TTTTAGTATTTGAAATTTTT+AGG | + | chr8_4:14461034-14461053 | None:intergenic | 10.0% |
| !!! | TATAATTTTCTATAATATGT+TGG | - | chr8_4:14461384-14461403 | Msa1315190:intron | 10.0% |
| !! | AAAGATAAAACTAAAAAATA+AGG | + | chr8_4:14461711-14461730 | None:intergenic | 10.0% |
| !! | AATAAGAATATAATCTATTT+AGG | + | chr8_4:14462144-14462163 | None:intergenic | 10.0% |
| !! | AAAAGTTCAGAAAATAATTA+AGG | - | chr8_4:14460167-14460186 | Msa1315190:CDS | 15.0% |
| !! | AAAGTTCAGAAAATAATTAA+GGG | - | chr8_4:14460168-14460187 | Msa1315190:CDS | 15.0% |
| !!! | AGTCAAATTGATTTTATATA+AGG | - | chr8_4:14460668-14460687 | Msa1315190:intron | 15.0% |
| !!! | TTTGTTTATCATTTTCATAT+TGG | - | chr8_4:14461575-14461594 | Msa1315190:intron | 15.0% |
| !!! | GTTTTTTATTTTTGTCTTAA+TGG | - | chr8_4:14461828-14461847 | Msa1315190:intron | 15.0% |
| !!! | TTTTTATAATCCGTAACAAA+CGG | + | chr8_4:14460318-14460337 | None:intergenic | 20.0% |
| !! | TAAAAAAGTGATTTACATTC+CGG | + | chr8_4:14460412-14460431 | None:intergenic | 20.0% |
| !!! | AAATGATTTTGTCATGAAAA+AGG | - | chr8_4:14460591-14460610 | Msa1315190:CDS | 20.0% |
| !!! | TCTTTTAAACATATATCAGA+AGG | + | chr8_4:14461476-14461495 | None:intergenic | 20.0% |
| !! | TAAGAAAACCAATTATGAAA+AGG | + | chr8_4:14461983-14462002 | None:intergenic | 20.0% |
| !!! | TTTTCATAATTGGTTTTCTT+AGG | - | chr8_4:14461982-14462001 | Msa1315190:intron | 20.0% |
| !! | TAGATTATATTCTTATTCTG+TGG | - | chr8_4:14462147-14462166 | Msa1315190:intron | 20.0% |
| !!! | AGAAATGTGTTACTATTATA+CGG | - | chr8_4:14462215-14462234 | Msa1315190:CDS | 20.0% |
| !!! | TCATTTTCTAAAATTAGTAC+TGG | + | chr8_4:14462405-14462424 | None:intergenic | 20.0% |
| !! | ACTCAATAAAAATTATACTG+CGG | + | chr8_4:14462488-14462507 | None:intergenic | 20.0% |
| !!! | TTGGCTTTAATTTTAGAAAT+GGG | - | chr8_4:14462732-14462751 | Msa1315190:intron | 20.0% |
| ! | TTCAAACCTTAATTCTACAA+CGG | - | chr8_4:14459767-14459786 | Msa1315190:three_prime_UTR | 25.0% |
| ! | TTCAGAAAATAATTAAGGGT+TGG | - | chr8_4:14460172-14460191 | Msa1315190:CDS | 25.0% |
| !!! | TCTCTCTTTTTTGTATTGTA+AGG | - | chr8_4:14460216-14460235 | Msa1315190:CDS | 25.0% |
| ! | AAGGTGGAAGATTTATTAAT+AGG | - | chr8_4:14460235-14460254 | Msa1315190:CDS | 25.0% |
| ! | AGGTGGAAGATTTATTAATA+GGG | - | chr8_4:14460236-14460255 | Msa1315190:CDS | 25.0% |
| ! | TGCTTATCATATAAGTGATT+AGG | - | chr8_4:14460290-14460309 | Msa1315190:CDS | 25.0% |
| ! | GCTTATCATATAAGTGATTA+GGG | - | chr8_4:14460291-14460310 | Msa1315190:CDS | 25.0% |
| !!! | ACAATACAACTTCTGTTTTT+CGG | + | chr8_4:14460380-14460399 | None:intergenic | 25.0% |
| !!! | TCTCAGAAAATCATTTTTCA+TGG | + | chr8_4:14460445-14460464 | None:intergenic | 25.0% |
| !!! | TTTTGAAAATCTGTAACAGA+TGG | - | chr8_4:14460532-14460551 | Msa1315190:CDS | 25.0% |
| ! | AAGGATATACATAGATATCT+AGG | + | chr8_4:14460829-14460848 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGTTTATCCCAAT+GGG | + | chr8_4:14460885-14460904 | None:intergenic | 25.0% |
| !!! | TTTTAAGTTGTTTATCCCAA+TGG | + | chr8_4:14460886-14460905 | None:intergenic | 25.0% |
| ! | TCTTAAAGTAAAGATGTTCA+AGG | - | chr8_4:14461063-14461082 | Msa1315190:intron | 25.0% |
| ! | AAGATGTATTTGAAGAAGAA+TGG | - | chr8_4:14461154-14461173 | Msa1315190:intron | 25.0% |
| !!! | GAGTTTTTCAGGATTATAAA+TGG | - | chr8_4:14461300-14461319 | Msa1315190:CDS | 25.0% |
| !!! | TTTTTCAGGATTATAAATGG+TGG | - | chr8_4:14461303-14461322 | Msa1315190:CDS | 25.0% |
| !! | CTGAAAGCAATAATTTTCTT+TGG | + | chr8_4:14461425-14461444 | None:intergenic | 25.0% |
| ! | CTTTCACTATCTGAAAAATT+TGG | - | chr8_4:14461727-14461746 | Msa1315190:intron | 25.0% |
| !! | TCAAGTTTCCTTTTCATAAT+TGG | - | chr8_4:14461972-14461991 | Msa1315190:intron | 25.0% |
| ! | AAAAAGACCCTTCTATAAAT+TGG | + | chr8_4:14462282-14462301 | None:intergenic | 25.0% |
| !!! | ATTTATAGAAGGGTCTTTTT+TGG | - | chr8_4:14462282-14462301 | Msa1315190:intron | 25.0% |
| ! | ATTATTTGTATCACATAGCA+TGG | - | chr8_4:14462320-14462339 | Msa1315190:intron | 25.0% |
| !!! | CATTTCTAAAATTAAAGCCA+AGG | + | chr8_4:14462733-14462752 | None:intergenic | 25.0% |
| !!! | CTTGGCTTTAATTTTAGAAA+TGG | - | chr8_4:14462731-14462750 | Msa1315190:intron | 25.0% |
| ! | GAAAATCAATGAAGGAAAAT+AGG | - | chr8_4:14462854-14462873 | Msa1315190:intron | 25.0% |
| TCTGAACCAAATCAATTCAA+TGG | - | chr8_4:14459805-14459824 | Msa1315190:three_prime_UTR | 30.0% | |
| !! | AGTCTTATTTGCTGTTGATT+TGG | - | chr8_4:14460045-14460064 | Msa1315190:CDS | 30.0% |
| !! | TTTCAGCATAGTTGATGATA+AGG | - | chr8_4:14460071-14460090 | Msa1315190:CDS | 30.0% |
| !! | TTCAGCATAGTTGATGATAA+GGG | - | chr8_4:14460072-14460091 | Msa1315190:CDS | 30.0% |
| AAATCATCATCATCAAGAGA+AGG | + | chr8_4:14460144-14460163 | None:intergenic | 30.0% | |
| !!! | CTCTTTTTTGTATTGTAAGG+TGG | - | chr8_4:14460219-14460238 | Msa1315190:CDS | 30.0% |
| !! | TTTATTAATAGGGTGCTGTT+TGG | - | chr8_4:14460246-14460265 | Msa1315190:CDS | 30.0% |
| GTTGTATTGTGTTTGTTTAC+CGG | - | chr8_4:14460390-14460409 | Msa1315190:intron | 30.0% | |
| ! | CATGAAAAAGGTGTAACAAA+CGG | - | chr8_4:14460603-14460622 | Msa1315190:CDS | 30.0% |
| ! | ATGAAAAAGGTGTAACAAAC+GGG | - | chr8_4:14460604-14460623 | Msa1315190:CDS | 30.0% |
| !!! | ACTTATTTTACCTTTTCCAC+TGG | + | chr8_4:14460788-14460807 | None:intergenic | 30.0% |
| ! | CATTTTTGCATAAGTTATCG+TGG | - | chr8_4:14460914-14460933 | Msa1315190:intron | 30.0% |
| ACTGTTAGAGAAATTGAAAG+TGG | - | chr8_4:14461123-14461142 | Msa1315190:intron | 30.0% | |
| ! | TCTGATTATGTGAGTTTTTC+AGG | - | chr8_4:14461289-14461308 | Msa1315190:CDS | 30.0% |
| ! | AGCTTTGTGTTGAATTGTAA+AGG | - | chr8_4:14461351-14461370 | Msa1315190:CDS | 30.0% |
| ! | TTAGTAAAACAAAGTACCAG+GGG | + | chr8_4:14461553-14461572 | None:intergenic | 30.0% |
| ! | GTTAGTAAAACAAAGTACCA+GGG | + | chr8_4:14461554-14461573 | None:intergenic | 30.0% |
| ! | AGTTAGTAAAACAAAGTACC+AGG | + | chr8_4:14461555-14461574 | None:intergenic | 30.0% |
| !! | TGAAAAATTTGGCTTTATGC+AGG | - | chr8_4:14461738-14461757 | Msa1315190:intron | 30.0% |
| CATAACTTTCTTTCACTATG+CGG | + | chr8_4:14462067-14462086 | None:intergenic | 30.0% | |
| ATAAGCCTCCAATTTATAGA+AGG | - | chr8_4:14462271-14462290 | Msa1315190:intron | 30.0% | |
| TAAGCCTCCAATTTATAGAA+GGG | - | chr8_4:14462272-14462291 | Msa1315190:intron | 30.0% | |
| !! | TTCTAAAATTAGTACTGGTG+TGG | + | chr8_4:14462400-14462419 | None:intergenic | 30.0% |
| ACTTCAATCTGTATCAGAAA+AGG | + | chr8_4:14462550-14462569 | None:intergenic | 30.0% | |
| ! | TTCGATATTGATTATGTCCT+TGG | - | chr8_4:14462713-14462732 | Msa1315190:intron | 30.0% |
| !! | GCTTTAATTTTAGAAATGGG+AGG | - | chr8_4:14462735-14462754 | Msa1315190:intron | 30.0% |
| GAAAAGGCAAAAACTGTTAA+TGG | - | chr8_4:14462765-14462784 | Msa1315190:intron | 30.0% | |
| TGTTAATGGAAAAACACTCT+CGG | - | chr8_4:14462779-14462798 | Msa1315190:intron | 30.0% | |
| GGAGATAAGAAAATCAATGA+AGG | - | chr8_4:14462846-14462865 | Msa1315190:intron | 30.0% | |
| !! | AATACAGTTGTTGTTTCTTG+AGG | + | chr8_4:14463066-14463085 | None:intergenic | 30.0% |
| ATTTGCAGTTATCTCCAAAA+TGG | + | chr8_4:14463524-14463543 | None:intergenic | 30.0% | |
| GATAACTGCAAATTCTTACA+CGG | - | chr8_4:14463531-14463550 | Msa1315190:CDS | 30.0% | |
| GTGTAAAATTATCCTTTCTC+TGG | - | chr8_4:14463651-14463670 | Msa1315190:five_prime_UTR | 30.0% | |
| CAAAATATCTATCCAGAGAA+AGG | + | chr8_4:14463666-14463685 | None:intergenic | 30.0% | |
| ! | CTTTCTCTGGATAGATATTT+TGG | - | chr8_4:14463664-14463683 | Msa1315190:five_prime_UTR | 30.0% |
| TAAAGATAGCTCGCTAATTG+TGG | - | chr8_4:14459711-14459730 | Msa1315190:three_prime_UTR | 35.0% | |
| TTTCGACCGTTGTAGAATTA+AGG | + | chr8_4:14459776-14459795 | None:intergenic | 35.0% | |
| TTCTTCAAGCATGTCGAAAT+CGG | + | chr8_4:14459927-14459946 | None:intergenic | 35.0% | |
| CTTGTTCTTGATTGAGAGAT+TGG | + | chr8_4:14459966-14459985 | None:intergenic | 35.0% | |
| CAATCTCTCAATCAAGAACA+AGG | - | chr8_4:14459964-14459983 | Msa1315190:CDS | 35.0% | |
| TCAAGAACAAGGCAAAGAAA+CGG | - | chr8_4:14459975-14459994 | Msa1315190:CDS | 35.0% | |
| ! | GTTGGTCTCATTTCATTTGA+TGG | - | chr8_4:14460190-14460209 | Msa1315190:CDS | 35.0% |
| AAGCACTAGTGAGACTATTT+GGG | + | chr8_4:14460762-14460781 | None:intergenic | 35.0% | |
| TAAGCACTAGTGAGACTATT+TGG | + | chr8_4:14460763-14460782 | None:intergenic | 35.0% | |
| GTTCTAACTAGTACTACTCA+AGG | + | chr8_4:14460863-14460882 | None:intergenic | 35.0% | |
| TAGTACTAGTTAGAACCCAT+TGG | - | chr8_4:14460867-14460886 | Msa1315190:intron | 35.0% | |
| AGTACTAGTTAGAACCCATT+GGG | - | chr8_4:14460868-14460887 | Msa1315190:intron | 35.0% | |
| AATAAGCTATAAACCGCTCA+TGG | - | chr8_4:14460949-14460968 | Msa1315190:intron | 35.0% | |
| TGGAAACAAATTTCCATGAG+CGG | + | chr8_4:14460965-14460984 | None:intergenic | 35.0% | |
| TTTCCATAAGCTTTCTCAAG+CGG | - | chr8_4:14460979-14460998 | Msa1315190:intron | 35.0% | |
| !! | TATGTTTTGAACTTTGCAGC+TGG | - | chr8_4:14461100-14461119 | Msa1315190:intron | 35.0% |
| ATTTGAAGAAGAATGGTCTG+AGG | - | chr8_4:14461161-14461180 | Msa1315190:intron | 35.0% | |
| TTCAGGATTATAAATGGTGG+AGG | - | chr8_4:14461306-14461325 | Msa1315190:CDS | 35.0% | |
| ! | TCAGGATTATAAATGGTGGA+GGG | - | chr8_4:14461307-14461326 | Msa1315190:CDS | 35.0% |
| CAATTCAACACAAAGCTATG+AGG | + | chr8_4:14461348-14461367 | None:intergenic | 35.0% | |
| GTGCTCTCTTAAAACACTTT+AGG | - | chr8_4:14461685-14461704 | Msa1315190:intron | 35.0% | |
| CAACATTCACATGTGCATTT+AGG | + | chr8_4:14461939-14461958 | None:intergenic | 35.0% | |
| CGCATAGTGAAAGAAAGTTA+TGG | - | chr8_4:14462065-14462084 | Msa1315190:CDS | 35.0% | |
| CAAGCAACAGCATACATTTA+CGG | - | chr8_4:14462094-14462113 | Msa1315190:intron | 35.0% | |
| CGGATATTAATATCAGCCAT+TGG | - | chr8_4:14462235-14462254 | Msa1315190:CDS | 35.0% | |
| AAGACCCTTCTATAAATTGG+AGG | + | chr8_4:14462279-14462298 | None:intergenic | 35.0% | |
| ACATCGATATATGTGGTTAC+AGG | + | chr8_4:14462433-14462452 | None:intergenic | 35.0% | |
| GTAACCACATATATCGATGT+TGG | - | chr8_4:14462433-14462452 | Msa1315190:intron | 35.0% | |
| TTTCGACCCTTAATCAGTAA+GGG | + | chr8_4:14462613-14462632 | None:intergenic | 35.0% | |
| TTAAGGGTCGAAACCTATAT+CGG | - | chr8_4:14462620-14462639 | Msa1315190:intron | 35.0% | |
| TCAAAGTCTTCAACCGATAT+AGG | + | chr8_4:14462636-14462655 | None:intergenic | 35.0% | |
| !! | TTTTAGAAATGGGAGGATGA+AGG | - | chr8_4:14462742-14462761 | Msa1315190:intron | 35.0% |
| TTTAGAAATGGGAGGATGAA+GGG | - | chr8_4:14462743-14462762 | Msa1315190:intron | 35.0% | |
| GTTAATGGAAAAACACTCTC+GGG | - | chr8_4:14462780-14462799 | Msa1315190:intron | 35.0% | |
| TTAATGGAAAAACACTCTCG+GGG | - | chr8_4:14462781-14462800 | Msa1315190:intron | 35.0% | |
| !! | TACTTGCTATTTGCACATTC+AGG | - | chr8_4:14462971-14462990 | Msa1315190:intron | 35.0% |
| ! | GTTCTTTGCTGAATCCTTTT+TGG | + | chr8_4:14463001-14463020 | None:intergenic | 35.0% |
| TTGCAATGGATGAATGTGAT+TGG | + | chr8_4:14463029-14463048 | None:intergenic | 35.0% | |
| AATCACATTCATCCATTGCA+AGG | - | chr8_4:14463028-14463047 | Msa1315190:intron | 35.0% | |
| ! | TTGATTTTGTGACCTTGCAA+TGG | + | chr8_4:14463043-14463062 | None:intergenic | 35.0% |
| ! | GATGGAAATTCGGTTTTTCT+TGG | + | chr8_4:14463096-14463115 | None:intergenic | 35.0% |
| TGAATGTTGGGATGGAAATT+CGG | + | chr8_4:14463106-14463125 | None:intergenic | 35.0% | |
| TGTTGACAAAGCTGAATGTT+GGG | + | chr8_4:14463118-14463137 | None:intergenic | 35.0% | |
| ! | GCTGGTTTATTTACAATTGC+CGG | + | chr8_4:14463141-14463160 | None:intergenic | 35.0% |
| AGATTCTCGAACTGTCATAA+TGG | - | chr8_4:14463191-14463210 | Msa1315190:intron | 35.0% | |
| GATTCTCGAACTGTCATAAT+GGG | - | chr8_4:14463192-14463211 | Msa1315190:intron | 35.0% | |
| ! | ATTTTCCAGAATTTCTGAGC+TGG | + | chr8_4:14463224-14463243 | None:intergenic | 35.0% |
| ! | AAGTGATTTGCACTTGTCAA+AGG | + | chr8_4:14463369-14463388 | None:intergenic | 35.0% |
| !! | GTTGATAGCTTTCTCTGTTT+GGG | + | chr8_4:14463464-14463483 | None:intergenic | 35.0% |
| !! | TGTTGATAGCTTTCTCTGTT+TGG | + | chr8_4:14463465-14463484 | None:intergenic | 35.0% |
| TGGCTGCCATTGAATTGATT+TGG | + | chr8_4:14459814-14459833 | None:intergenic | 40.0% | |
| AGCCAAACAAGATTCACCAA+TGG | - | chr8_4:14459829-14459848 | Msa1315190:exon | 40.0% | |
| CTCCATTGGTGAATCTTGTT+TGG | + | chr8_4:14459834-14459853 | None:intergenic | 40.0% | |
| ATGATTTCGTGAAGCTCCAT+TGG | + | chr8_4:14459848-14459867 | None:intergenic | 40.0% | |
| GAAATCATCACCGAATCTGA+AGG | - | chr8_4:14459860-14459879 | Msa1315190:CDS | 40.0% | |
| GTCGCATTCTGAATATGGAT+CGG | + | chr8_4:14459888-14459907 | None:intergenic | 40.0% | |
| GAATCGTCGCATTCTGAATA+TGG | + | chr8_4:14459893-14459912 | None:intergenic | 40.0% | |
| TCTTCAAGCATGTCGAAATC+GGG | + | chr8_4:14459926-14459945 | None:intergenic | 40.0% | |
| GAGATTGGAGAAACTACGAT+GGG | + | chr8_4:14459951-14459970 | None:intergenic | 40.0% | |
| AGAGATTGGAGAAACTACGA+TGG | + | chr8_4:14459952-14459971 | None:intergenic | 40.0% | |
| !! | CATAGTTGATGATAAGGGTC+TGG | - | chr8_4:14460077-14460096 | Msa1315190:CDS | 40.0% |
| TGAGATGAATGCACAAGTGT+TGG | - | chr8_4:14460107-14460126 | Msa1315190:CDS | 40.0% | |
| ! | TGATTAGGGTCCGTTTGTTA+CGG | - | chr8_4:14460305-14460324 | Msa1315190:CDS | 40.0% |
| AAGTGAGAAGTCGATCTTAG+TGG | + | chr8_4:14460470-14460489 | None:intergenic | 40.0% | |
| ! | ACTCAAGGCTTGTTCACATA+AGG | + | chr8_4:14460848-14460867 | None:intergenic | 40.0% |
| CACACTTATCCAGCGTATAA+AGG | - | chr8_4:14461201-14461220 | Msa1315190:intron | 40.0% | |
| ! | CAGGATTATAAATGGTGGAG+GGG | - | chr8_4:14461308-14461327 | Msa1315190:CDS | 40.0% |
| TTCAACACAAAGCTATGAGG+CGG | + | chr8_4:14461345-14461364 | None:intergenic | 40.0% | |
| !!! | AGGTACTGGATTTTGAGTAC+TGG | + | chr8_4:14461526-14461545 | None:intergenic | 40.0% |
| ! | TAAAACAAAGTACCAGGGGA+TGG | + | chr8_4:14461549-14461568 | None:intergenic | 40.0% |
| GACTGTGATTACATGTCTAG+AGG | + | chr8_4:14461651-14461670 | None:intergenic | 40.0% | |
| TCACAGTCTCTTGTGTTTGT+CGG | - | chr8_4:14461663-14461682 | Msa1315190:intron | 40.0% | |
| CTCAAACAAAACAACATCCC+CGG | + | chr8_4:14461775-14461794 | None:intergenic | 40.0% | |
| AATGCACATGTGAATGTTGC+TGG | - | chr8_4:14461940-14461959 | Msa1315190:intron | 40.0% | |
| CGTAAATGTATGCTGTTGCT+TGG | + | chr8_4:14462096-14462115 | None:intergenic | 40.0% | |
| !! | TTTGGTGTTCGTGTCTATGT+CGG | + | chr8_4:14462353-14462372 | None:intergenic | 40.0% |
| ! | CGTGTTAGTGTCATTGTGTT+TGG | + | chr8_4:14462371-14462390 | None:intergenic | 40.0% |
| GTGTCCAACATCGATATATG+TGG | + | chr8_4:14462440-14462459 | None:intergenic | 40.0% | |
| !! | TGATACAGATTGAAGTGCTG+TGG | - | chr8_4:14462554-14462573 | Msa1315190:intron | 40.0% |
| TTAATCAGTAAGGGGTGAAG+GGG | + | chr8_4:14462604-14462623 | None:intergenic | 40.0% | |
| CTTAATCAGTAAGGGGTGAA+GGG | + | chr8_4:14462605-14462624 | None:intergenic | 40.0% | |
| ! | CTTCACCCCTTACTGATTAA+GGG | - | chr8_4:14462604-14462623 | Msa1315190:intron | 40.0% |
| TTCGACCCTTAATCAGTAAG+GGG | + | chr8_4:14462612-14462631 | None:intergenic | 40.0% | |
| GTTTCGACCCTTAATCAGTA+AGG | + | chr8_4:14462614-14462633 | None:intergenic | 40.0% | |
| CACATTCAGGATCTCCAAAA+AGG | - | chr8_4:14462984-14463003 | Msa1315190:intron | 40.0% | |
| TGGATGAATGTGATTGGAAC+TGG | + | chr8_4:14463023-14463042 | None:intergenic | 40.0% | |
| ! | GTGTTGACAAAGCTGAATGT+TGG | + | chr8_4:14463119-14463138 | None:intergenic | 40.0% |
| ! | ACATTCAGCTTTGTCAACAC+CGG | - | chr8_4:14463119-14463138 | Msa1315190:intron | 40.0% |
| ATGACAGTTCGAGAATCTGT+AGG | + | chr8_4:14463189-14463208 | None:intergenic | 40.0% | |
| ! | TAGTTGGGTTGTCTCTGTAA+TGG | + | chr8_4:14463281-14463300 | None:intergenic | 40.0% |
| ATCTCTCAGCAGTACTAGTT+GGG | + | chr8_4:14463296-14463315 | None:intergenic | 40.0% | |
| TATCTCTCAGCAGTACTAGT+TGG | + | chr8_4:14463297-14463316 | None:intergenic | 40.0% | |
| CTTTCATTGCTGAGACAAAC+AGG | - | chr8_4:14463322-14463341 | Msa1315190:intron | 40.0% | |
| AAATCACTTTGTTCCGCGTT+CGG | - | chr8_4:14463380-14463399 | Msa1315190:intron | 40.0% | |
| !! | TGATTTGCATTTTCCGAACG+CGG | + | chr8_4:14463426-14463445 | None:intergenic | 40.0% |
| ! | TTTTGTAGACATTTTGCCCG+TGG | - | chr8_4:14463492-14463511 | Msa1315190:CDS | 40.0% |
| TTACACGGTTGAGAGACTAA+GGG | - | chr8_4:14463546-14463565 | Msa1315190:CDS | 40.0% | |
| ! | GATGCATGAAAGCTTTGTAG+TGG | - | chr8_4:14463568-14463587 | Msa1315190:exon | 40.0% |
| TGGATCGGATCCTTCAGATT+CGG | + | chr8_4:14459873-14459892 | None:intergenic | 45.0% | |
| AAGCAATCCTCGAGAGCTTA+TGG | - | chr8_4:14460707-14460726 | Msa1315190:intron | 45.0% | |
| GACATATCCATAAGCTCTCG+AGG | + | chr8_4:14460717-14460736 | None:intergenic | 45.0% | |
| AGTGCTTATGCCAGTGGAAA+AGG | - | chr8_4:14460775-14460794 | Msa1315190:CDS | 45.0% | |
| AAGTTATCGTGGAGAGCTAG+TGG | - | chr8_4:14460925-14460944 | Msa1315190:intron | 45.0% | |
| AGACCGCTTGAGAAAGCTTA+TGG | + | chr8_4:14460985-14461004 | None:intergenic | 45.0% | |
| ! | AAGAATGGTCTGAGGCTAAC+TGG | - | chr8_4:14461169-14461188 | Msa1315190:intron | 45.0% |
| ! | AGAATGGTCTGAGGCTAACT+GGG | - | chr8_4:14461170-14461189 | Msa1315190:intron | 45.0% |
| ! | TCTGAGGCTAACTGGGAATA+AGG | - | chr8_4:14461177-14461196 | Msa1315190:intron | 45.0% |
| CTTGATGCTCCTTTATACGC+TGG | + | chr8_4:14461213-14461232 | None:intergenic | 45.0% | |
| TCAACACAAAGCTATGAGGC+GGG | + | chr8_4:14461344-14461363 | None:intergenic | 45.0% | |
| TTAGGTTCAACATAGCGTCC+AGG | - | chr8_4:14462000-14462019 | Msa1315190:intron | 45.0% | |
| ! | GCAACAATCCTTTTGCCACA+CGG | + | chr8_4:14462041-14462060 | None:intergenic | 45.0% |
| TGTGGCAAAAGGATTGTTGC+AGG | - | chr8_4:14462041-14462060 | Msa1315190:CDS | 45.0% | |
| ! | ATATCAGCCATTGGAGTACC+AGG | - | chr8_4:14462244-14462263 | Msa1315190:CDS | 45.0% |
| TATGAAGCCTGGTACTCCAA+TGG | + | chr8_4:14462254-14462273 | None:intergenic | 45.0% | |
| AATTGGAGGCTTATGAAGCC+TGG | + | chr8_4:14462265-14462284 | None:intergenic | 45.0% | |
| !! | ATTGAAGTGCTGTGGAGCAA+GGG | - | chr8_4:14462562-14462581 | Msa1315190:intron | 45.0% |
| CCTTAATCAGTAAGGGGTGA+AGG | + | chr8_4:14462606-14462625 | None:intergenic | 45.0% | |
| ! | CCTTCACCCCTTACTGATTA+AGG | - | chr8_4:14462603-14462622 | Msa1315190:intron | 45.0% |
| !! | TCGGTTGAAGACTTTGAGAC+AGG | - | chr8_4:14462639-14462658 | Msa1315190:intron | 45.0% |
| AATGGGAGGATGAAGGGAAA+AGG | - | chr8_4:14462749-14462768 | Msa1315190:intron | 45.0% | |
| GGAAGCAAGGATACAGGAAA+AGG | - | chr8_4:14462825-14462844 | Msa1315190:intron | 45.0% | |
| GACAAAGCTGAATGTTGGGA+TGG | + | chr8_4:14463114-14463133 | None:intergenic | 45.0% | |
| TCAGACCAGCTCAGAAATTC+TGG | - | chr8_4:14463216-14463235 | Msa1315190:CDS | 45.0% | |
| ACAGGAGAGCTTCTTACCAA+AGG | - | chr8_4:14463340-14463359 | Msa1315190:intron | 45.0% | |
| CACTTGTCAAAGGCTTCCTT+TGG | + | chr8_4:14463359-14463378 | None:intergenic | 45.0% | |
| AAACCACTTTGTTCCGCGTT+CGG | - | chr8_4:14463410-14463429 | Msa1315190:CDS | 45.0% | |
| CTTACACGGTTGAGAGACTA+AGG | - | chr8_4:14463545-14463564 | Msa1315190:CDS | 45.0% | |
| CTCACTAGTGCTTATGCCAG+TGG | - | chr8_4:14460769-14460788 | Msa1315190:CDS | 50.0% | |
| ! | AACAAAGTACCAGGGGATGG+AGG | + | chr8_4:14461546-14461565 | None:intergenic | 50.0% |
| TATGCAGGTGATGCATGCAC+CGG | - | chr8_4:14461753-14461772 | Msa1315190:intron | 50.0% | |
| TTCAACATAGCGTCCAGGAG+TGG | - | chr8_4:14462005-14462024 | Msa1315190:intron | 50.0% | |
| ! | ACAATCCTTTTGCCACACGG+TGG | + | chr8_4:14462038-14462057 | None:intergenic | 50.0% |
| !! | GATTGAAGTGCTGTGGAGCA+AGG | - | chr8_4:14462561-14462580 | Msa1315190:intron | 50.0% |
| GAAGCGATGCTGCACAAATG+AGG | + | chr8_4:14462667-14462686 | None:intergenic | 50.0% | |
| AGACAGGGAAGCAAGGATAC+AGG | - | chr8_4:14462819-14462838 | Msa1315190:intron | 50.0% | |
| ! | TGGTTTGCATTTGCCGAACG+CGG | + | chr8_4:14463396-14463415 | None:intergenic | 50.0% |
| TTTCCGAACGCGGAACAAAG+TGG | + | chr8_4:14463416-14463435 | None:intergenic | 50.0% | |
| ! | GTAGACATTTTGCCCGTGGA+AGG | - | chr8_4:14463496-14463515 | Msa1315190:CDS | 50.0% |
| TCCAAAATGGCACCTTCCAC+GGG | + | chr8_4:14463511-14463530 | None:intergenic | 50.0% | |
| CTCCAAAATGGCACCTTCCA+CGG | + | chr8_4:14463512-14463531 | None:intergenic | 50.0% | |
| AATCCAGTACCTCCATCCCC+TGG | - | chr8_4:14461534-14461553 | Msa1315190:intron | 55.0% | |
| ATGCAGGTGATGCATGCACC+GGG | - | chr8_4:14461754-14461773 | Msa1315190:intron | 55.0% | |
| AACATAGCGTCCAGGAGTGG+CGG | - | chr8_4:14462008-14462027 | Msa1315190:intron | 55.0% | |
| GGTGTTCGTGTCTATGTCGG+CGG | + | chr8_4:14462350-14462369 | None:intergenic | 55.0% | |
| TCAGTAAGGGGTGAAGGGGA+GGG | + | chr8_4:14462600-14462619 | None:intergenic | 55.0% | |
| ATCAGTAAGGGGTGAAGGGG+AGG | + | chr8_4:14462601-14462620 | None:intergenic | 55.0% | |
| ATCCCTTGCTAGGGCAGACA+GGG | - | chr8_4:14462804-14462823 | Msa1315190:intron | 55.0% | |
| TTCCCTGTCTGCCCTAGCAA+GGG | + | chr8_4:14462809-14462828 | None:intergenic | 55.0% | |
| CGCTGTTCAGTTACAGCTGC+TGG | + | chr8_4:14463159-14463178 | None:intergenic | 55.0% | |
| ! | GTACCAGGGGATGGAGGTAC+TGG | + | chr8_4:14461540-14461559 | None:intergenic | 60.0% |
| TGCAGGTGATGCATGCACCG+GGG | - | chr8_4:14461755-14461774 | Msa1315190:intron | 60.0% | |
| GTGGTCCACCGTGTGGCAAA+AGG | - | chr8_4:14462030-14462049 | Msa1315190:CDS | 60.0% | |
| ACTCTCGGGGATCCCTTGCT+AGG | - | chr8_4:14462794-14462813 | Msa1315190:intron | 60.0% | |
| CTCTCGGGGATCCCTTGCTA+GGG | - | chr8_4:14462795-14462814 | Msa1315190:intron | 60.0% | |
| GATCCCTTGCTAGGGCAGAC+AGG | - | chr8_4:14462803-14462822 | Msa1315190:intron | 60.0% | |
| CTTCCCTGTCTGCCCTAGCA+AGG | + | chr8_4:14462810-14462829 | None:intergenic | 60.0% | |
| CTAGGGCAGACAGGGAAGCA+AGG | - | chr8_4:14462812-14462831 | Msa1315190:intron | 60.0% | |
| !!! | GCCCGTGGAAGGTGCCATTT+TGG | - | chr8_4:14463507-14463526 | Msa1315190:CDS | 60.0% |
| ATAGCGTCCAGGAGTGGCGG+TGG | - | chr8_4:14462011-14462030 | Msa1315190:intron | 65.0% | |
| AAGGGGTGAAGGGGAGGGAG+AGG | + | chr8_4:14462595-14462614 | None:intergenic | 65.0% | |
| AGTGGCGGTGGTCCACCGTG+TGG | - | chr8_4:14462023-14462042 | Msa1315190:intron | 70.0% | |
| CGGTGGACCACCGCCACTCC+TGG | + | chr8_4:14462021-14462040 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14459709 | 14463687 | 14459709 | ID=Msa1315190;Name=Msa1315190 |
| chr8_4 | mRNA | 14459709 | 14463687 | 14459709 | ID=Msa1315190-mRNA-1;Parent=Msa1315190;Name=Msa1315190-mRNA-1;_AED=0.07;_eAED=0.07;_QI=115|1|1|1|1|1|9|130|472 |
| chr8_4 | exon | 14459709 | 14460403 | 14459709 | ID=Msa1315190-mRNA-1:exon:5483;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14460521 | 14460648 | 14460521 | ID=Msa1315190-mRNA-1:exon:5482;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14460736 | 14460834 | 14460736 | ID=Msa1315190-mRNA-1:exon:5481;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14461281 | 14461392 | 14461281 | ID=Msa1315190-mRNA-1:exon:5480;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14461585 | 14461636 | 14461585 | ID=Msa1315190-mRNA-1:exon:5479;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14462024 | 14462085 | 14462024 | ID=Msa1315190-mRNA-1:exon:5478;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14462163 | 14462277 | 14462163 | ID=Msa1315190-mRNA-1:exon:5477;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14463207 | 14463319 | 14463207 | ID=Msa1315190-mRNA-1:exon:5476;Parent=Msa1315190-mRNA-1 |
| chr8_4 | exon | 14463400 | 14463687 | 14463400 | ID=Msa1315190-mRNA-1:exon:5475;Parent=Msa1315190-mRNA-1 |
| chr8_4 | five_prime_UTR | 14463573 | 14463687 | 14463573 | ID=Msa1315190-mRNA-1:five_prime_utr;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14463400 | 14463572 | 14463400 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14463207 | 14463319 | 14463207 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14462163 | 14462277 | 14462163 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14462024 | 14462085 | 14462024 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14461585 | 14461636 | 14461585 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14461281 | 14461392 | 14461281 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14460736 | 14460834 | 14460736 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14460521 | 14460648 | 14460521 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | CDS | 14459839 | 14460403 | 14459839 | ID=Msa1315190-mRNA-1:cds;Parent=Msa1315190-mRNA-1 |
| chr8_4 | three_prime_UTR | 14459709 | 14459838 | 14459709 | ID=Msa1315190-mRNA-1:three_prime_utr;Parent=Msa1315190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
