Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315220 | sp|Q338N2|C3H62_ORYSJ | 56.398 | 211 | 90 | 2 | 85 | 295 | 118 | 326 | 1.56e-69 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315220 | A0A396GLI1 | 96.186 | 472 | 18 | 0 | 1 | 472 | 1 | 472 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1315220 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0754430 | Msa1315220 | 0.802032 | 6.799533e-49 | -8.615850e-47 |
| Msa1315190 | Msa1315220 | 0.984772 | 1.530328e-161 | -8.615850e-47 |
| Msa1315220 | Msa1429070 | 0.801631 | 8.220395e-49 | -8.615850e-47 |
| Msa0266460 | Msa1315220 | 0.815021 | 1.144386e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315220 | MtrunA17_Chr8g0344621 | 96.186 | 472 | 18 | 0 | 1 | 472 | 1 | 472 | 0.0 | 938 |
| Msa1315220 | MtrunA17_Chr5g0402541 | 56.633 | 196 | 81 | 3 | 82 | 275 | 67 | 260 | 3.22e-68 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315220 | AT5G66840.2 | 47.177 | 248 | 117 | 6 | 89 | 334 | 79 | 314 | 2.89e-64 | 217 |
| Msa1315220 | AT5G66840.1 | 47.177 | 248 | 117 | 6 | 89 | 334 | 79 | 314 | 2.89e-64 | 217 |
Find 126 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTCTGGATAGATATTT+TGG | 0.122994 | 8_4:+14498825 | Msa1315220:three_prime_UTR |
| CCTTCACCCCTTACTGATTA+AGG | 0.202973 | 8_4:+14497764 | Msa1315220:CDS |
| AAAAGTTCAGAAAATAATTA+AGG | 0.207744 | 8_4:+14495328 | Msa1315220:CDS |
| TGTTGATAGCTTTCTCTGTT+TGG | 0.240306 | 8_4:-14498623 | None:intergenic |
| GAATCGTCGCATTCTGAATA+TGG | 0.258910 | 8_4:-14495051 | None:intergenic |
| CACATTCAGGATCTCCAAAA+AGG | 0.266194 | 8_4:+14498145 | Msa1315220:intron |
| CTCCATTGGTGAATCTTGTT+TGG | 0.266402 | 8_4:-14494992 | None:intergenic |
| GTTGATAGCTTTCTCTGTTT+GGG | 0.266738 | 8_4:-14498622 | None:intergenic |
| TTTCGACCGTTGTAGAATTA+AGG | 0.267573 | 8_4:-14494934 | None:intergenic |
| GAAAATCAATGAAGGAAAAT+AGG | 0.288860 | 8_4:+14498015 | Msa1315220:CDS |
| TCAGACCAGCTCAGAAATTC+TGG | 0.290575 | 8_4:+14498377 | Msa1315220:CDS |
| GCCCGTGGAAGGTGCCATTT+TGG | 0.299361 | 8_4:+14498668 | Msa1315220:CDS |
| ATTTGCAGTTATCTCCAAAA+TGG | 0.321401 | 8_4:-14498682 | None:intergenic |
| AAGAATGGTCTGAGGCTAAC+TGG | 0.324632 | 8_4:+14496330 | Msa1315220:CDS |
| TCAAAGTCTTCAACCGATAT+AGG | 0.329078 | 8_4:-14497794 | None:intergenic |
| TTCTTCAAGCATGTCGAAAT+CGG | 0.336462 | 8_4:-14495085 | None:intergenic |
| CTTGTTCTTGATTGAGAGAT+TGG | 0.343536 | 8_4:-14495124 | None:intergenic |
| AGATTCTCGAACTGTCATAA+TGG | 0.357899 | 8_4:+14498352 | Msa1315220:CDS |
| GCTGGTTTATTTACAATTGC+CGG | 0.361821 | 8_4:-14498299 | None:intergenic |
| CGCTGTTCAGTTACAGCTGC+TGG | 0.367136 | 8_4:-14498317 | None:intergenic |
| CACACTTATCCAGCGTATAA+AGG | 0.370761 | 8_4:+14496362 | Msa1315220:CDS |
| AAACCACTTTGTTCCGCGTT+CGG | 0.372875 | 8_4:+14498571 | Msa1315220:CDS |
| TGGCTGCCATTGAATTGATT+TGG | 0.377572 | 8_4:-14494972 | None:intergenic |
| CAAGCAACAGCATACATTTA+CGG | 0.378848 | 8_4:+14497255 | Msa1315220:CDS |
| GTGTAAAATTATCCTTTCTC+TGG | 0.379908 | 8_4:+14498812 | Msa1315220:three_prime_UTR |
| CACTTGTCAAAGGCTTCCTT+TGG | 0.379911 | 8_4:-14498517 | None:intergenic |
| TCTGAGGCTAACTGGGAATA+AGG | 0.384184 | 8_4:+14496338 | Msa1315220:CDS |
| AAGGGGTGAAGGGGAGGGAG+AGG | 0.392273 | 8_4:-14497753 | None:intergenic |
| TGAATGTTGGGATGGAAATT+CGG | 0.395984 | 8_4:-14498264 | None:intergenic |
| CTTTCATTGCTGAGACAAAC+AGG | 0.396565 | 8_4:+14498483 | Msa1315220:CDS |
| TTTCAGCATAGTTGATGATA+AGG | 0.399534 | 8_4:+14495232 | Msa1315220:intron |
| AAATCACTTTGTTCCGCGTT+CGG | 0.400132 | 8_4:+14498541 | Msa1315220:CDS |
| ATCTCTCAGCAGTACTAGTT+GGG | 0.403360 | 8_4:-14498454 | None:intergenic |
| CTTCACCCCTTACTGATTAA+GGG | 0.415771 | 8_4:+14497765 | Msa1315220:CDS |
| CGGTGGACCACCGCCACTCC+TGG | 0.419904 | 8_4:-14497179 | None:intergenic |
| TGTGGCAAAAGGATTGTTGC+AGG | 0.420400 | 8_4:+14497202 | Msa1315220:CDS |
| AAAGTTCAGAAAATAATTAA+GGG | 0.424535 | 8_4:+14495329 | Msa1315220:CDS |
| GATTCTCGAACTGTCATAAT+GGG | 0.429886 | 8_4:+14498353 | Msa1315220:CDS |
| CTTACACGGTTGAGAGACTA+AGG | 0.432484 | 8_4:+14498706 | Msa1315220:exon |
| TATCTCTCAGCAGTACTAGT+TGG | 0.435640 | 8_4:-14498455 | None:intergenic |
| TTCAGCATAGTTGATGATAA+GGG | 0.447797 | 8_4:+14495233 | Msa1315220:intron |
| GTTTCGACCCTTAATCAGTA+AGG | 0.452446 | 8_4:-14497772 | None:intergenic |
| GATCCCTTGCTAGGGCAGAC+AGG | 0.454561 | 8_4:+14497964 | Msa1315220:CDS |
| TCTTCAAGCATGTCGAAATC+GGG | 0.462655 | 8_4:-14495084 | None:intergenic |
| CAAAATATCTATCCAGAGAA+AGG | 0.468151 | 8_4:-14498824 | None:intergenic |
| TCCAAAATGGCACCTTCCAC+GGG | 0.469114 | 8_4:-14498669 | None:intergenic |
| GTGGTCCACCGTGTGGCAAA+AGG | 0.472781 | 8_4:+14497191 | Msa1315220:CDS |
| CTCCAAAATGGCACCTTCCA+CGG | 0.473630 | 8_4:-14498670 | None:intergenic |
| TTTAGAAATGGGAGGATGAA+GGG | 0.475468 | 8_4:+14497904 | Msa1315220:intron |
| AGACAGGGAAGCAAGGATAC+AGG | 0.477397 | 8_4:+14497980 | Msa1315220:CDS |
| CTTCCCTGTCTGCCCTAGCA+AGG | 0.477748 | 8_4:-14497968 | None:intergenic |
| TCAGTAAGGGGTGAAGGGGA+GGG | 0.489102 | 8_4:-14497758 | None:intergenic |
| TTAAGGGTCGAAACCTATAT+CGG | 0.489344 | 8_4:+14497781 | Msa1315220:CDS |
| TTCAGGATTATAAATGGTGG+AGG | 0.493103 | 8_4:+14496467 | Msa1315220:intron |
| TCGGTTGAAGACTTTGAGAC+AGG | 0.497659 | 8_4:+14497800 | Msa1315220:CDS |
| TGGATGAATGTGATTGGAAC+TGG | 0.500067 | 8_4:-14498181 | None:intergenic |
| TCTGAACCAAATCAATTCAA+TGG | 0.502311 | 8_4:+14494966 | Msa1315220:exon |
| CATAGTTGATGATAAGGGTC+TGG | 0.506481 | 8_4:+14495238 | Msa1315220:CDS |
| TTGCAATGGATGAATGTGAT+TGG | 0.508041 | 8_4:-14498187 | None:intergenic |
| ATCAGTAAGGGGTGAAGGGG+AGG | 0.518183 | 8_4:-14497759 | None:intergenic |
| CGCATAGTGAAAGAAAGTTA+TGG | 0.518912 | 8_4:+14497226 | Msa1315220:CDS |
| AAGTGATTTGCACTTGTCAA+AGG | 0.519989 | 8_4:-14498527 | None:intergenic |
| AAGATGTATTTGAAGAAGAA+TGG | 0.520707 | 8_4:+14496315 | Msa1315220:CDS |
| ATGCAGGTGATGCATGCACC+GGG | 0.522264 | 8_4:+14496915 | Msa1315220:intron |
| ATGATTTCGTGAAGCTCCAT+TGG | 0.522647 | 8_4:-14495006 | None:intergenic |
| TAGTTGGGTTGTCTCTGTAA+TGG | 0.523341 | 8_4:-14498439 | None:intergenic |
| AATGGGAGGATGAAGGGAAA+AGG | 0.523988 | 8_4:+14497910 | Msa1315220:CDS |
| GATTGAAGTGCTGTGGAGCA+AGG | 0.525744 | 8_4:+14497722 | Msa1315220:intron |
| ATAGCGTCCAGGAGTGGCGG+TGG | 0.529524 | 8_4:+14497172 | Msa1315220:CDS |
| CTTGATGCTCCTTTATACGC+TGG | 0.532687 | 8_4:-14496371 | None:intergenic |
| GGAAGCAAGGATACAGGAAA+AGG | 0.534990 | 8_4:+14497986 | Msa1315220:CDS |
| TTAGGTTCAACATAGCGTCC+AGG | 0.535937 | 8_4:+14497161 | Msa1315220:intron |
| TTCCCTGTCTGCCCTAGCAA+GGG | 0.536827 | 8_4:-14497967 | None:intergenic |
| AGCTTTGTGTTGAATTGTAA+AGG | 0.539427 | 8_4:+14496512 | Msa1315220:CDS |
| CAATTCAACACAAAGCTATG+AGG | 0.540203 | 8_4:-14496506 | None:intergenic |
| CCTTAATCAGTAAGGGGTGA+AGG | 0.540298 | 8_4:-14497764 | None:intergenic |
| TGGATCGGATCCTTCAGATT+CGG | 0.541533 | 8_4:-14495031 | None:intergenic |
| TAAAGATAGCTCGCTAATTG+TGG | 0.542123 | 8_4:+14494872 | Msa1315220:five_prime_UTR |
| GGAGATAAGAAAATCAATGA+AGG | 0.544402 | 8_4:+14498007 | Msa1315220:CDS |
| ATCCCTTGCTAGGGCAGACA+GGG | 0.545866 | 8_4:+14497965 | Msa1315220:CDS |
| AGAATGGTCTGAGGCTAACT+GGG | 0.547559 | 8_4:+14496331 | Msa1315220:CDS |
| CAATCTCTCAATCAAGAACA+AGG | 0.549028 | 8_4:+14495125 | Msa1315220:CDS |
| TCAGGATTATAAATGGTGGA+GGG | 0.552104 | 8_4:+14496468 | Msa1315220:intron |
| TGTTGACAAAGCTGAATGTT+GGG | 0.553775 | 8_4:-14498276 | None:intergenic |
| CTTAATCAGTAAGGGGTGAA+GGG | 0.556388 | 8_4:-14497763 | None:intergenic |
| AATACAGTTGTTGTTTCTTG+AGG | 0.558283 | 8_4:-14498224 | None:intergenic |
| AATCACATTCATCCATTGCA+AGG | 0.561327 | 8_4:+14498189 | Msa1315220:CDS |
| TGAGATGAATGCACAAGTGT+TGG | 0.565055 | 8_4:+14495268 | Msa1315220:CDS |
| TATGCAGGTGATGCATGCAC+CGG | 0.565952 | 8_4:+14496914 | Msa1315220:intron |
| TTTCGACCCTTAATCAGTAA+GGG | 0.568427 | 8_4:-14497771 | None:intergenic |
| CAGGATTATAAATGGTGGAG+GGG | 0.571443 | 8_4:+14496469 | Msa1315220:intron |
| TCAAGAACAAGGCAAAGAAA+CGG | 0.572702 | 8_4:+14495136 | Msa1315220:CDS |
| CTCTCGGGGATCCCTTGCTA+GGG | 0.575799 | 8_4:+14497956 | Msa1315220:CDS |
| GTGTTGACAAAGCTGAATGT+TGG | 0.578190 | 8_4:-14498277 | None:intergenic |
| ATTGAAGTGCTGTGGAGCAA+GGG | 0.578962 | 8_4:+14497723 | Msa1315220:CDS |
| CTCAAACAAAACAACATCCC+CGG | 0.591505 | 8_4:-14496933 | None:intergenic |
| TTAATCAGTAAGGGGTGAAG+GGG | 0.595390 | 8_4:-14497762 | None:intergenic |
| CGTAAATGTATGCTGTTGCT+TGG | 0.595593 | 8_4:-14497254 | None:intergenic |
| GAGATTGGAGAAACTACGAT+GGG | 0.596765 | 8_4:-14495109 | None:intergenic |
| ACTGTTAGAGAAATTGAAAG+TGG | 0.598309 | 8_4:+14496284 | Msa1315220:CDS |
| CTAGGGCAGACAGGGAAGCA+AGG | 0.600937 | 8_4:+14497973 | Msa1315220:CDS |
| ATGACAGTTCGAGAATCTGT+AGG | 0.601874 | 8_4:-14498347 | None:intergenic |
| TGGTTTGCATTTGCCGAACG+CGG | 0.602529 | 8_4:-14498554 | None:intergenic |
| TTCAACACAAAGCTATGAGG+CGG | 0.603722 | 8_4:-14496503 | None:intergenic |
| GAAATCATCACCGAATCTGA+AGG | 0.611750 | 8_4:+14495021 | Msa1315220:CDS |
| AACATAGCGTCCAGGAGTGG+CGG | 0.611856 | 8_4:+14497169 | Msa1315220:CDS |
| TTCAACATAGCGTCCAGGAG+TGG | 0.613492 | 8_4:+14497166 | Msa1315220:CDS |
| TCAACACAAAGCTATGAGGC+GGG | 0.614292 | 8_4:-14496502 | None:intergenic |
| AAATCATCATCATCAAGAGA+AGG | 0.614555 | 8_4:-14495302 | None:intergenic |
| TTCGACCCTTAATCAGTAAG+GGG | 0.614930 | 8_4:-14497770 | None:intergenic |
| TTCAAACCTTAATTCTACAA+CGG | 0.615565 | 8_4:+14494928 | Msa1315220:five_prime_UTR |
| GTCGCATTCTGAATATGGAT+CGG | 0.616154 | 8_4:-14495046 | None:intergenic |
| TGATACAGATTGAAGTGCTG+TGG | 0.616244 | 8_4:+14497715 | Msa1315220:intron |
| TTTCCGAACGCGGAACAAAG+TGG | 0.622185 | 8_4:-14498574 | None:intergenic |
| GACAAAGCTGAATGTTGGGA+TGG | 0.627606 | 8_4:-14498272 | None:intergenic |
| ACATTCAGCTTTGTCAACAC+CGG | 0.627641 | 8_4:+14498280 | Msa1315220:CDS |
| GATAACTGCAAATTCTTACA+CGG | 0.628626 | 8_4:+14498692 | Msa1315220:CDS |
| CATAACTTTCTTTCACTATG+CGG | 0.640723 | 8_4:-14497225 | None:intergenic |
| GATGCATGAAAGCTTTGTAG+TGG | 0.643733 | 8_4:+14498729 | Msa1315220:three_prime_UTR |
| ACAGGAGAGCTTCTTACCAA+AGG | 0.644981 | 8_4:+14498501 | Msa1315220:CDS |
| AGAGATTGGAGAAACTACGA+TGG | 0.646170 | 8_4:-14495110 | None:intergenic |
| TTACACGGTTGAGAGACTAA+GGG | 0.671696 | 8_4:+14498707 | Msa1315220:exon |
| AGTGGCGGTGGTCCACCGTG+TGG | 0.672232 | 8_4:+14497184 | Msa1315220:CDS |
| AGCCAAACAAGATTCACCAA+TGG | 0.688618 | 8_4:+14494990 | Msa1315220:CDS |
| ATTTGAAGAAGAATGGTCTG+AGG | 0.702992 | 8_4:+14496322 | Msa1315220:CDS |
| TGCAGGTGATGCATGCACCG+GGG | 0.775103 | 8_4:+14496916 | Msa1315220:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCAAATTTTGATAAAT+GGG | - | chr8_4:14495184-14495203 | None:intergenic | 10.0% |
| !!! | AAAAATCAAATTTTGATAAA+TGG | - | chr8_4:14495185-14495204 | None:intergenic | 10.0% |
| !!! | TTTTAGTATTTGAAATTTTT+AGG | - | chr8_4:14496195-14496214 | None:intergenic | 10.0% |
| !!! | TATAATTTTCTATAATATGT+TGG | + | chr8_4:14496545-14496564 | Msa1315220:intron | 10.0% |
| !! | AAAGATAAAACTAAAAAATA+AGG | - | chr8_4:14496872-14496891 | None:intergenic | 10.0% |
| !! | AATAAGAATATAATCTATTT+AGG | - | chr8_4:14497305-14497324 | None:intergenic | 10.0% |
| !! | AAAAGTTCAGAAAATAATTA+AGG | + | chr8_4:14495328-14495347 | Msa1315220:CDS | 15.0% |
| !! | AAAGTTCAGAAAATAATTAA+GGG | + | chr8_4:14495329-14495348 | Msa1315220:CDS | 15.0% |
| !!! | AGTCAAATTGATTTTATATA+AGG | + | chr8_4:14495829-14495848 | Msa1315220:intron | 15.0% |
| !!! | TTTGTTTATCATTTTCATAT+TGG | + | chr8_4:14496736-14496755 | Msa1315220:intron | 15.0% |
| !!! | GTTTTTTATTTTTGTCTTAA+TGG | + | chr8_4:14496989-14497008 | Msa1315220:intron | 15.0% |
| !!! | TTTTTATAATCCGTAACAAA+CGG | - | chr8_4:14495479-14495498 | None:intergenic | 20.0% |
| !! | TAAAAAAGTGATTTACATTC+CGG | - | chr8_4:14495573-14495592 | None:intergenic | 20.0% |
| !!! | AAATGATTTTGTCATGAAAA+AGG | + | chr8_4:14495752-14495771 | Msa1315220:intron | 20.0% |
| !!! | TCTTTTAAACATATATCAGA+AGG | - | chr8_4:14496637-14496656 | None:intergenic | 20.0% |
| !! | TAAGAAAACCAATTATGAAA+AGG | - | chr8_4:14497144-14497163 | None:intergenic | 20.0% |
| !!! | TTTTCATAATTGGTTTTCTT+AGG | + | chr8_4:14497143-14497162 | Msa1315220:intron | 20.0% |
| !! | TAGATTATATTCTTATTCTG+TGG | + | chr8_4:14497308-14497327 | Msa1315220:intron | 20.0% |
| !!! | AGAAATGTGTTACTATTATA+CGG | + | chr8_4:14497376-14497395 | Msa1315220:intron | 20.0% |
| !!! | TCATTTTCTAAAATTAGTAC+TGG | - | chr8_4:14497566-14497585 | None:intergenic | 20.0% |
| !! | ACTCAATAAAAATTATACTG+CGG | - | chr8_4:14497649-14497668 | None:intergenic | 20.0% |
| !!! | TTGGCTTTAATTTTAGAAAT+GGG | + | chr8_4:14497893-14497912 | Msa1315220:intron | 20.0% |
| ! | TTCAAACCTTAATTCTACAA+CGG | + | chr8_4:14494928-14494947 | Msa1315220:five_prime_UTR | 25.0% |
| ! | TTCAGAAAATAATTAAGGGT+TGG | + | chr8_4:14495333-14495352 | Msa1315220:intron | 25.0% |
| !!! | TCTCTCTTTTTTGTATTGTA+AGG | + | chr8_4:14495377-14495396 | Msa1315220:intron | 25.0% |
| ! | AAGGTGGAAGATTTATTAAT+AGG | + | chr8_4:14495396-14495415 | Msa1315220:intron | 25.0% |
| ! | AGGTGGAAGATTTATTAATA+GGG | + | chr8_4:14495397-14495416 | Msa1315220:intron | 25.0% |
| ! | TGCTTATCATATAAGTGATT+AGG | + | chr8_4:14495451-14495470 | Msa1315220:intron | 25.0% |
| ! | GCTTATCATATAAGTGATTA+GGG | + | chr8_4:14495452-14495471 | Msa1315220:intron | 25.0% |
| !!! | ACAATACAACTTCTGTTTTT+CGG | - | chr8_4:14495541-14495560 | None:intergenic | 25.0% |
| !!! | TCTCAGAAAATCATTTTTCA+TGG | - | chr8_4:14495606-14495625 | None:intergenic | 25.0% |
| !!! | TTTTGAAAATCTGTAACAGA+TGG | + | chr8_4:14495693-14495712 | Msa1315220:intron | 25.0% |
| ! | AAGGATATACATAGATATCT+AGG | - | chr8_4:14495990-14496009 | None:intergenic | 25.0% |
| !!! | TTTAAGTTGTTTATCCCAAT+GGG | - | chr8_4:14496046-14496065 | None:intergenic | 25.0% |
| !!! | TTTTAAGTTGTTTATCCCAA+TGG | - | chr8_4:14496047-14496066 | None:intergenic | 25.0% |
| ! | TCTTAAAGTAAAGATGTTCA+AGG | + | chr8_4:14496224-14496243 | Msa1315220:intron | 25.0% |
| ! | AAGATGTATTTGAAGAAGAA+TGG | + | chr8_4:14496315-14496334 | Msa1315220:CDS | 25.0% |
| !!! | GAGTTTTTCAGGATTATAAA+TGG | + | chr8_4:14496461-14496480 | Msa1315220:intron | 25.0% |
| !!! | TTTTTCAGGATTATAAATGG+TGG | + | chr8_4:14496464-14496483 | Msa1315220:intron | 25.0% |
| !! | CTGAAAGCAATAATTTTCTT+TGG | - | chr8_4:14496586-14496605 | None:intergenic | 25.0% |
| ! | CTTTCACTATCTGAAAAATT+TGG | + | chr8_4:14496888-14496907 | Msa1315220:intron | 25.0% |
| !! | TCAAGTTTCCTTTTCATAAT+TGG | + | chr8_4:14497133-14497152 | Msa1315220:intron | 25.0% |
| ! | AAAAAGACCCTTCTATAAAT+TGG | - | chr8_4:14497443-14497462 | None:intergenic | 25.0% |
| !!! | ATTTATAGAAGGGTCTTTTT+TGG | + | chr8_4:14497443-14497462 | Msa1315220:intron | 25.0% |
| ! | ATTATTTGTATCACATAGCA+TGG | + | chr8_4:14497481-14497500 | Msa1315220:intron | 25.0% |
| !!! | CATTTCTAAAATTAAAGCCA+AGG | - | chr8_4:14497894-14497913 | None:intergenic | 25.0% |
| !!! | CTTGGCTTTAATTTTAGAAA+TGG | + | chr8_4:14497892-14497911 | Msa1315220:intron | 25.0% |
| ! | GAAAATCAATGAAGGAAAAT+AGG | + | chr8_4:14498015-14498034 | Msa1315220:CDS | 25.0% |
| TCTGAACCAAATCAATTCAA+TGG | + | chr8_4:14494966-14494985 | Msa1315220:exon | 30.0% | |
| !! | AGTCTTATTTGCTGTTGATT+TGG | + | chr8_4:14495206-14495225 | Msa1315220:intron | 30.0% |
| !! | TTTCAGCATAGTTGATGATA+AGG | + | chr8_4:14495232-14495251 | Msa1315220:intron | 30.0% |
| !! | TTCAGCATAGTTGATGATAA+GGG | + | chr8_4:14495233-14495252 | Msa1315220:intron | 30.0% |
| AAATCATCATCATCAAGAGA+AGG | - | chr8_4:14495305-14495324 | None:intergenic | 30.0% | |
| !!! | CTCTTTTTTGTATTGTAAGG+TGG | + | chr8_4:14495380-14495399 | Msa1315220:intron | 30.0% |
| !! | TTTATTAATAGGGTGCTGTT+TGG | + | chr8_4:14495407-14495426 | Msa1315220:intron | 30.0% |
| GTTGTATTGTGTTTGTTTAC+CGG | + | chr8_4:14495551-14495570 | Msa1315220:intron | 30.0% | |
| ! | CATGAAAAAGGTGTAACAAA+CGG | + | chr8_4:14495764-14495783 | Msa1315220:intron | 30.0% |
| ! | ATGAAAAAGGTGTAACAAAC+GGG | + | chr8_4:14495765-14495784 | Msa1315220:intron | 30.0% |
| !!! | ACTTATTTTACCTTTTCCAC+TGG | - | chr8_4:14495949-14495968 | None:intergenic | 30.0% |
| ! | CATTTTTGCATAAGTTATCG+TGG | + | chr8_4:14496075-14496094 | Msa1315220:intron | 30.0% |
| ACTGTTAGAGAAATTGAAAG+TGG | + | chr8_4:14496284-14496303 | Msa1315220:CDS | 30.0% | |
| ! | TCTGATTATGTGAGTTTTTC+AGG | + | chr8_4:14496450-14496469 | Msa1315220:intron | 30.0% |
| ! | AGCTTTGTGTTGAATTGTAA+AGG | + | chr8_4:14496512-14496531 | Msa1315220:CDS | 30.0% |
| ! | TTAGTAAAACAAAGTACCAG+GGG | - | chr8_4:14496714-14496733 | None:intergenic | 30.0% |
| ! | GTTAGTAAAACAAAGTACCA+GGG | - | chr8_4:14496715-14496734 | None:intergenic | 30.0% |
| ! | AGTTAGTAAAACAAAGTACC+AGG | - | chr8_4:14496716-14496735 | None:intergenic | 30.0% |
| !! | TGAAAAATTTGGCTTTATGC+AGG | + | chr8_4:14496899-14496918 | Msa1315220:intron | 30.0% |
| CATAACTTTCTTTCACTATG+CGG | - | chr8_4:14497228-14497247 | None:intergenic | 30.0% | |
| ATAAGCCTCCAATTTATAGA+AGG | + | chr8_4:14497432-14497451 | Msa1315220:intron | 30.0% | |
| TAAGCCTCCAATTTATAGAA+GGG | + | chr8_4:14497433-14497452 | Msa1315220:intron | 30.0% | |
| !! | TTCTAAAATTAGTACTGGTG+TGG | - | chr8_4:14497561-14497580 | None:intergenic | 30.0% |
| ACTTCAATCTGTATCAGAAA+AGG | - | chr8_4:14497711-14497730 | None:intergenic | 30.0% | |
| ! | TTCGATATTGATTATGTCCT+TGG | + | chr8_4:14497874-14497893 | Msa1315220:intron | 30.0% |
| !! | GCTTTAATTTTAGAAATGGG+AGG | + | chr8_4:14497896-14497915 | Msa1315220:intron | 30.0% |
| GAAAAGGCAAAAACTGTTAA+TGG | + | chr8_4:14497926-14497945 | Msa1315220:CDS | 30.0% | |
| TGTTAATGGAAAAACACTCT+CGG | + | chr8_4:14497940-14497959 | Msa1315220:CDS | 30.0% | |
| GGAGATAAGAAAATCAATGA+AGG | + | chr8_4:14498007-14498026 | Msa1315220:CDS | 30.0% | |
| !! | AATACAGTTGTTGTTTCTTG+AGG | - | chr8_4:14498227-14498246 | None:intergenic | 30.0% |
| ATTTGCAGTTATCTCCAAAA+TGG | - | chr8_4:14498685-14498704 | None:intergenic | 30.0% | |
| GATAACTGCAAATTCTTACA+CGG | + | chr8_4:14498692-14498711 | Msa1315220:CDS | 30.0% | |
| GTGTAAAATTATCCTTTCTC+TGG | + | chr8_4:14498812-14498831 | Msa1315220:three_prime_UTR | 30.0% | |
| CAAAATATCTATCCAGAGAA+AGG | - | chr8_4:14498827-14498846 | None:intergenic | 30.0% | |
| ! | CTTTCTCTGGATAGATATTT+TGG | + | chr8_4:14498825-14498844 | Msa1315220:three_prime_UTR | 30.0% |
| TAAAGATAGCTCGCTAATTG+TGG | + | chr8_4:14494872-14494891 | Msa1315220:five_prime_UTR | 35.0% | |
| TTTCGACCGTTGTAGAATTA+AGG | - | chr8_4:14494937-14494956 | None:intergenic | 35.0% | |
| TTCTTCAAGCATGTCGAAAT+CGG | - | chr8_4:14495088-14495107 | None:intergenic | 35.0% | |
| CTTGTTCTTGATTGAGAGAT+TGG | - | chr8_4:14495127-14495146 | None:intergenic | 35.0% | |
| CAATCTCTCAATCAAGAACA+AGG | + | chr8_4:14495125-14495144 | Msa1315220:CDS | 35.0% | |
| TCAAGAACAAGGCAAAGAAA+CGG | + | chr8_4:14495136-14495155 | Msa1315220:CDS | 35.0% | |
| ! | GTTGGTCTCATTTCATTTGA+TGG | + | chr8_4:14495351-14495370 | Msa1315220:intron | 35.0% |
| AAGCACTAGTGAGACTATTT+GGG | - | chr8_4:14495923-14495942 | None:intergenic | 35.0% | |
| TAAGCACTAGTGAGACTATT+TGG | - | chr8_4:14495924-14495943 | None:intergenic | 35.0% | |
| GTTCTAACTAGTACTACTCA+AGG | - | chr8_4:14496024-14496043 | None:intergenic | 35.0% | |
| TAGTACTAGTTAGAACCCAT+TGG | + | chr8_4:14496028-14496047 | Msa1315220:intron | 35.0% | |
| AGTACTAGTTAGAACCCATT+GGG | + | chr8_4:14496029-14496048 | Msa1315220:intron | 35.0% | |
| AATAAGCTATAAACCGCTCA+TGG | + | chr8_4:14496110-14496129 | Msa1315220:intron | 35.0% | |
| TGGAAACAAATTTCCATGAG+CGG | - | chr8_4:14496126-14496145 | None:intergenic | 35.0% | |
| TTTCCATAAGCTTTCTCAAG+CGG | + | chr8_4:14496140-14496159 | Msa1315220:intron | 35.0% | |
| !! | TATGTTTTGAACTTTGCAGC+TGG | + | chr8_4:14496261-14496280 | Msa1315220:intron | 35.0% |
| ATTTGAAGAAGAATGGTCTG+AGG | + | chr8_4:14496322-14496341 | Msa1315220:CDS | 35.0% | |
| TTCAGGATTATAAATGGTGG+AGG | + | chr8_4:14496467-14496486 | Msa1315220:intron | 35.0% | |
| ! | TCAGGATTATAAATGGTGGA+GGG | + | chr8_4:14496468-14496487 | Msa1315220:intron | 35.0% |
| CAATTCAACACAAAGCTATG+AGG | - | chr8_4:14496509-14496528 | None:intergenic | 35.0% | |
| GTGCTCTCTTAAAACACTTT+AGG | + | chr8_4:14496846-14496865 | Msa1315220:intron | 35.0% | |
| CAACATTCACATGTGCATTT+AGG | - | chr8_4:14497100-14497119 | None:intergenic | 35.0% | |
| CGCATAGTGAAAGAAAGTTA+TGG | + | chr8_4:14497226-14497245 | Msa1315220:CDS | 35.0% | |
| CAAGCAACAGCATACATTTA+CGG | + | chr8_4:14497255-14497274 | Msa1315220:CDS | 35.0% | |
| CGGATATTAATATCAGCCAT+TGG | + | chr8_4:14497396-14497415 | Msa1315220:intron | 35.0% | |
| AAGACCCTTCTATAAATTGG+AGG | - | chr8_4:14497440-14497459 | None:intergenic | 35.0% | |
| ACATCGATATATGTGGTTAC+AGG | - | chr8_4:14497594-14497613 | None:intergenic | 35.0% | |
| GTAACCACATATATCGATGT+TGG | + | chr8_4:14497594-14497613 | Msa1315220:intron | 35.0% | |
| TTTCGACCCTTAATCAGTAA+GGG | - | chr8_4:14497774-14497793 | None:intergenic | 35.0% | |
| TTAAGGGTCGAAACCTATAT+CGG | + | chr8_4:14497781-14497800 | Msa1315220:CDS | 35.0% | |
| TCAAAGTCTTCAACCGATAT+AGG | - | chr8_4:14497797-14497816 | None:intergenic | 35.0% | |
| !! | TTTTAGAAATGGGAGGATGA+AGG | + | chr8_4:14497903-14497922 | Msa1315220:intron | 35.0% |
| TTTAGAAATGGGAGGATGAA+GGG | + | chr8_4:14497904-14497923 | Msa1315220:intron | 35.0% | |
| GTTAATGGAAAAACACTCTC+GGG | + | chr8_4:14497941-14497960 | Msa1315220:CDS | 35.0% | |
| TTAATGGAAAAACACTCTCG+GGG | + | chr8_4:14497942-14497961 | Msa1315220:CDS | 35.0% | |
| !! | TACTTGCTATTTGCACATTC+AGG | + | chr8_4:14498132-14498151 | Msa1315220:intron | 35.0% |
| ! | GTTCTTTGCTGAATCCTTTT+TGG | - | chr8_4:14498162-14498181 | None:intergenic | 35.0% |
| TTGCAATGGATGAATGTGAT+TGG | - | chr8_4:14498190-14498209 | None:intergenic | 35.0% | |
| AATCACATTCATCCATTGCA+AGG | + | chr8_4:14498189-14498208 | Msa1315220:CDS | 35.0% | |
| ! | TTGATTTTGTGACCTTGCAA+TGG | - | chr8_4:14498204-14498223 | None:intergenic | 35.0% |
| ! | GATGGAAATTCGGTTTTTCT+TGG | - | chr8_4:14498257-14498276 | None:intergenic | 35.0% |
| TGAATGTTGGGATGGAAATT+CGG | - | chr8_4:14498267-14498286 | None:intergenic | 35.0% | |
| TGTTGACAAAGCTGAATGTT+GGG | - | chr8_4:14498279-14498298 | None:intergenic | 35.0% | |
| ! | GCTGGTTTATTTACAATTGC+CGG | - | chr8_4:14498302-14498321 | None:intergenic | 35.0% |
| AGATTCTCGAACTGTCATAA+TGG | + | chr8_4:14498352-14498371 | Msa1315220:CDS | 35.0% | |
| GATTCTCGAACTGTCATAAT+GGG | + | chr8_4:14498353-14498372 | Msa1315220:CDS | 35.0% | |
| ! | ATTTTCCAGAATTTCTGAGC+TGG | - | chr8_4:14498385-14498404 | None:intergenic | 35.0% |
| ! | AAGTGATTTGCACTTGTCAA+AGG | - | chr8_4:14498530-14498549 | None:intergenic | 35.0% |
| !! | GTTGATAGCTTTCTCTGTTT+GGG | - | chr8_4:14498625-14498644 | None:intergenic | 35.0% |
| !! | TGTTGATAGCTTTCTCTGTT+TGG | - | chr8_4:14498626-14498645 | None:intergenic | 35.0% |
| TGGCTGCCATTGAATTGATT+TGG | - | chr8_4:14494975-14494994 | None:intergenic | 40.0% | |
| AGCCAAACAAGATTCACCAA+TGG | + | chr8_4:14494990-14495009 | Msa1315220:CDS | 40.0% | |
| CTCCATTGGTGAATCTTGTT+TGG | - | chr8_4:14494995-14495014 | None:intergenic | 40.0% | |
| ATGATTTCGTGAAGCTCCAT+TGG | - | chr8_4:14495009-14495028 | None:intergenic | 40.0% | |
| GAAATCATCACCGAATCTGA+AGG | + | chr8_4:14495021-14495040 | Msa1315220:CDS | 40.0% | |
| GTCGCATTCTGAATATGGAT+CGG | - | chr8_4:14495049-14495068 | None:intergenic | 40.0% | |
| GAATCGTCGCATTCTGAATA+TGG | - | chr8_4:14495054-14495073 | None:intergenic | 40.0% | |
| TCTTCAAGCATGTCGAAATC+GGG | - | chr8_4:14495087-14495106 | None:intergenic | 40.0% | |
| GAGATTGGAGAAACTACGAT+GGG | - | chr8_4:14495112-14495131 | None:intergenic | 40.0% | |
| AGAGATTGGAGAAACTACGA+TGG | - | chr8_4:14495113-14495132 | None:intergenic | 40.0% | |
| !! | CATAGTTGATGATAAGGGTC+TGG | + | chr8_4:14495238-14495257 | Msa1315220:CDS | 40.0% |
| TGAGATGAATGCACAAGTGT+TGG | + | chr8_4:14495268-14495287 | Msa1315220:CDS | 40.0% | |
| ! | TGATTAGGGTCCGTTTGTTA+CGG | + | chr8_4:14495466-14495485 | Msa1315220:intron | 40.0% |
| AAGTGAGAAGTCGATCTTAG+TGG | - | chr8_4:14495631-14495650 | None:intergenic | 40.0% | |
| ! | ACTCAAGGCTTGTTCACATA+AGG | - | chr8_4:14496009-14496028 | None:intergenic | 40.0% |
| CACACTTATCCAGCGTATAA+AGG | + | chr8_4:14496362-14496381 | Msa1315220:CDS | 40.0% | |
| ! | CAGGATTATAAATGGTGGAG+GGG | + | chr8_4:14496469-14496488 | Msa1315220:intron | 40.0% |
| TTCAACACAAAGCTATGAGG+CGG | - | chr8_4:14496506-14496525 | None:intergenic | 40.0% | |
| !!! | AGGTACTGGATTTTGAGTAC+TGG | - | chr8_4:14496687-14496706 | None:intergenic | 40.0% |
| ! | TAAAACAAAGTACCAGGGGA+TGG | - | chr8_4:14496710-14496729 | None:intergenic | 40.0% |
| GACTGTGATTACATGTCTAG+AGG | - | chr8_4:14496812-14496831 | None:intergenic | 40.0% | |
| TCACAGTCTCTTGTGTTTGT+CGG | + | chr8_4:14496824-14496843 | Msa1315220:intron | 40.0% | |
| CTCAAACAAAACAACATCCC+CGG | - | chr8_4:14496936-14496955 | None:intergenic | 40.0% | |
| AATGCACATGTGAATGTTGC+TGG | + | chr8_4:14497101-14497120 | Msa1315220:intron | 40.0% | |
| CGTAAATGTATGCTGTTGCT+TGG | - | chr8_4:14497257-14497276 | None:intergenic | 40.0% | |
| !! | TTTGGTGTTCGTGTCTATGT+CGG | - | chr8_4:14497514-14497533 | None:intergenic | 40.0% |
| ! | CGTGTTAGTGTCATTGTGTT+TGG | - | chr8_4:14497532-14497551 | None:intergenic | 40.0% |
| GTGTCCAACATCGATATATG+TGG | - | chr8_4:14497601-14497620 | None:intergenic | 40.0% | |
| !! | TGATACAGATTGAAGTGCTG+TGG | + | chr8_4:14497715-14497734 | Msa1315220:intron | 40.0% |
| TTAATCAGTAAGGGGTGAAG+GGG | - | chr8_4:14497765-14497784 | None:intergenic | 40.0% | |
| CTTAATCAGTAAGGGGTGAA+GGG | - | chr8_4:14497766-14497785 | None:intergenic | 40.0% | |
| ! | CTTCACCCCTTACTGATTAA+GGG | + | chr8_4:14497765-14497784 | Msa1315220:CDS | 40.0% |
| TTCGACCCTTAATCAGTAAG+GGG | - | chr8_4:14497773-14497792 | None:intergenic | 40.0% | |
| GTTTCGACCCTTAATCAGTA+AGG | - | chr8_4:14497775-14497794 | None:intergenic | 40.0% | |
| CACATTCAGGATCTCCAAAA+AGG | + | chr8_4:14498145-14498164 | Msa1315220:intron | 40.0% | |
| TGGATGAATGTGATTGGAAC+TGG | - | chr8_4:14498184-14498203 | None:intergenic | 40.0% | |
| ! | GTGTTGACAAAGCTGAATGT+TGG | - | chr8_4:14498280-14498299 | None:intergenic | 40.0% |
| ! | ACATTCAGCTTTGTCAACAC+CGG | + | chr8_4:14498280-14498299 | Msa1315220:CDS | 40.0% |
| ATGACAGTTCGAGAATCTGT+AGG | - | chr8_4:14498350-14498369 | None:intergenic | 40.0% | |
| ! | TAGTTGGGTTGTCTCTGTAA+TGG | - | chr8_4:14498442-14498461 | None:intergenic | 40.0% |
| ATCTCTCAGCAGTACTAGTT+GGG | - | chr8_4:14498457-14498476 | None:intergenic | 40.0% | |
| TATCTCTCAGCAGTACTAGT+TGG | - | chr8_4:14498458-14498477 | None:intergenic | 40.0% | |
| CTTTCATTGCTGAGACAAAC+AGG | + | chr8_4:14498483-14498502 | Msa1315220:CDS | 40.0% | |
| AAATCACTTTGTTCCGCGTT+CGG | + | chr8_4:14498541-14498560 | Msa1315220:CDS | 40.0% | |
| !! | TGATTTGCATTTTCCGAACG+CGG | - | chr8_4:14498587-14498606 | None:intergenic | 40.0% |
| ! | TTTTGTAGACATTTTGCCCG+TGG | + | chr8_4:14498653-14498672 | Msa1315220:CDS | 40.0% |
| TTACACGGTTGAGAGACTAA+GGG | + | chr8_4:14498707-14498726 | Msa1315220:exon | 40.0% | |
| ! | GATGCATGAAAGCTTTGTAG+TGG | + | chr8_4:14498729-14498748 | Msa1315220:three_prime_UTR | 40.0% |
| TGGATCGGATCCTTCAGATT+CGG | - | chr8_4:14495034-14495053 | None:intergenic | 45.0% | |
| AAGCAATCCTCGAGAGCTTA+TGG | + | chr8_4:14495868-14495887 | Msa1315220:intron | 45.0% | |
| GACATATCCATAAGCTCTCG+AGG | - | chr8_4:14495878-14495897 | None:intergenic | 45.0% | |
| AGTGCTTATGCCAGTGGAAA+AGG | + | chr8_4:14495936-14495955 | Msa1315220:intron | 45.0% | |
| AAGTTATCGTGGAGAGCTAG+TGG | + | chr8_4:14496086-14496105 | Msa1315220:intron | 45.0% | |
| AGACCGCTTGAGAAAGCTTA+TGG | - | chr8_4:14496146-14496165 | None:intergenic | 45.0% | |
| ! | AAGAATGGTCTGAGGCTAAC+TGG | + | chr8_4:14496330-14496349 | Msa1315220:CDS | 45.0% |
| ! | AGAATGGTCTGAGGCTAACT+GGG | + | chr8_4:14496331-14496350 | Msa1315220:CDS | 45.0% |
| ! | TCTGAGGCTAACTGGGAATA+AGG | + | chr8_4:14496338-14496357 | Msa1315220:CDS | 45.0% |
| CTTGATGCTCCTTTATACGC+TGG | - | chr8_4:14496374-14496393 | None:intergenic | 45.0% | |
| TCAACACAAAGCTATGAGGC+GGG | - | chr8_4:14496505-14496524 | None:intergenic | 45.0% | |
| TTAGGTTCAACATAGCGTCC+AGG | + | chr8_4:14497161-14497180 | Msa1315220:intron | 45.0% | |
| ! | GCAACAATCCTTTTGCCACA+CGG | - | chr8_4:14497202-14497221 | None:intergenic | 45.0% |
| TGTGGCAAAAGGATTGTTGC+AGG | + | chr8_4:14497202-14497221 | Msa1315220:CDS | 45.0% | |
| ! | ATATCAGCCATTGGAGTACC+AGG | + | chr8_4:14497405-14497424 | Msa1315220:intron | 45.0% |
| TATGAAGCCTGGTACTCCAA+TGG | - | chr8_4:14497415-14497434 | None:intergenic | 45.0% | |
| AATTGGAGGCTTATGAAGCC+TGG | - | chr8_4:14497426-14497445 | None:intergenic | 45.0% | |
| !! | ATTGAAGTGCTGTGGAGCAA+GGG | + | chr8_4:14497723-14497742 | Msa1315220:CDS | 45.0% |
| CCTTAATCAGTAAGGGGTGA+AGG | - | chr8_4:14497767-14497786 | None:intergenic | 45.0% | |
| ! | CCTTCACCCCTTACTGATTA+AGG | + | chr8_4:14497764-14497783 | Msa1315220:CDS | 45.0% |
| !! | TCGGTTGAAGACTTTGAGAC+AGG | + | chr8_4:14497800-14497819 | Msa1315220:CDS | 45.0% |
| AATGGGAGGATGAAGGGAAA+AGG | + | chr8_4:14497910-14497929 | Msa1315220:CDS | 45.0% | |
| GGAAGCAAGGATACAGGAAA+AGG | + | chr8_4:14497986-14498005 | Msa1315220:CDS | 45.0% | |
| GACAAAGCTGAATGTTGGGA+TGG | - | chr8_4:14498275-14498294 | None:intergenic | 45.0% | |
| TCAGACCAGCTCAGAAATTC+TGG | + | chr8_4:14498377-14498396 | Msa1315220:CDS | 45.0% | |
| ACAGGAGAGCTTCTTACCAA+AGG | + | chr8_4:14498501-14498520 | Msa1315220:CDS | 45.0% | |
| CACTTGTCAAAGGCTTCCTT+TGG | - | chr8_4:14498520-14498539 | None:intergenic | 45.0% | |
| AAACCACTTTGTTCCGCGTT+CGG | + | chr8_4:14498571-14498590 | Msa1315220:CDS | 45.0% | |
| CTTACACGGTTGAGAGACTA+AGG | + | chr8_4:14498706-14498725 | Msa1315220:exon | 45.0% | |
| CTCACTAGTGCTTATGCCAG+TGG | + | chr8_4:14495930-14495949 | Msa1315220:intron | 50.0% | |
| ! | AACAAAGTACCAGGGGATGG+AGG | - | chr8_4:14496707-14496726 | None:intergenic | 50.0% |
| TATGCAGGTGATGCATGCAC+CGG | + | chr8_4:14496914-14496933 | Msa1315220:intron | 50.0% | |
| TTCAACATAGCGTCCAGGAG+TGG | + | chr8_4:14497166-14497185 | Msa1315220:CDS | 50.0% | |
| ! | ACAATCCTTTTGCCACACGG+TGG | - | chr8_4:14497199-14497218 | None:intergenic | 50.0% |
| !! | GATTGAAGTGCTGTGGAGCA+AGG | + | chr8_4:14497722-14497741 | Msa1315220:intron | 50.0% |
| GAAGCGATGCTGCACAAATG+AGG | - | chr8_4:14497828-14497847 | None:intergenic | 50.0% | |
| AGACAGGGAAGCAAGGATAC+AGG | + | chr8_4:14497980-14497999 | Msa1315220:CDS | 50.0% | |
| ! | TGGTTTGCATTTGCCGAACG+CGG | - | chr8_4:14498557-14498576 | None:intergenic | 50.0% |
| TTTCCGAACGCGGAACAAAG+TGG | - | chr8_4:14498577-14498596 | None:intergenic | 50.0% | |
| ! | GTAGACATTTTGCCCGTGGA+AGG | + | chr8_4:14498657-14498676 | Msa1315220:CDS | 50.0% |
| TCCAAAATGGCACCTTCCAC+GGG | - | chr8_4:14498672-14498691 | None:intergenic | 50.0% | |
| CTCCAAAATGGCACCTTCCA+CGG | - | chr8_4:14498673-14498692 | None:intergenic | 50.0% | |
| AATCCAGTACCTCCATCCCC+TGG | + | chr8_4:14496695-14496714 | Msa1315220:intron | 55.0% | |
| ATGCAGGTGATGCATGCACC+GGG | + | chr8_4:14496915-14496934 | Msa1315220:intron | 55.0% | |
| AACATAGCGTCCAGGAGTGG+CGG | + | chr8_4:14497169-14497188 | Msa1315220:CDS | 55.0% | |
| GGTGTTCGTGTCTATGTCGG+CGG | - | chr8_4:14497511-14497530 | None:intergenic | 55.0% | |
| TCAGTAAGGGGTGAAGGGGA+GGG | - | chr8_4:14497761-14497780 | None:intergenic | 55.0% | |
| ATCAGTAAGGGGTGAAGGGG+AGG | - | chr8_4:14497762-14497781 | None:intergenic | 55.0% | |
| ATCCCTTGCTAGGGCAGACA+GGG | + | chr8_4:14497965-14497984 | Msa1315220:CDS | 55.0% | |
| TTCCCTGTCTGCCCTAGCAA+GGG | - | chr8_4:14497970-14497989 | None:intergenic | 55.0% | |
| CGCTGTTCAGTTACAGCTGC+TGG | - | chr8_4:14498320-14498339 | None:intergenic | 55.0% | |
| ! | GTACCAGGGGATGGAGGTAC+TGG | - | chr8_4:14496701-14496720 | None:intergenic | 60.0% |
| TGCAGGTGATGCATGCACCG+GGG | + | chr8_4:14496916-14496935 | Msa1315220:intron | 60.0% | |
| GTGGTCCACCGTGTGGCAAA+AGG | + | chr8_4:14497191-14497210 | Msa1315220:CDS | 60.0% | |
| ACTCTCGGGGATCCCTTGCT+AGG | + | chr8_4:14497955-14497974 | Msa1315220:CDS | 60.0% | |
| CTCTCGGGGATCCCTTGCTA+GGG | + | chr8_4:14497956-14497975 | Msa1315220:CDS | 60.0% | |
| GATCCCTTGCTAGGGCAGAC+AGG | + | chr8_4:14497964-14497983 | Msa1315220:CDS | 60.0% | |
| CTTCCCTGTCTGCCCTAGCA+AGG | - | chr8_4:14497971-14497990 | None:intergenic | 60.0% | |
| CTAGGGCAGACAGGGAAGCA+AGG | + | chr8_4:14497973-14497992 | Msa1315220:CDS | 60.0% | |
| !!! | GCCCGTGGAAGGTGCCATTT+TGG | + | chr8_4:14498668-14498687 | Msa1315220:CDS | 60.0% |
| ATAGCGTCCAGGAGTGGCGG+TGG | + | chr8_4:14497172-14497191 | Msa1315220:CDS | 65.0% | |
| AAGGGGTGAAGGGGAGGGAG+AGG | - | chr8_4:14497756-14497775 | None:intergenic | 65.0% | |
| AGTGGCGGTGGTCCACCGTG+TGG | + | chr8_4:14497184-14497203 | Msa1315220:CDS | 70.0% | |
| CGGTGGACCACCGCCACTCC+TGG | - | chr8_4:14497182-14497201 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14494870 | 14498848 | 14494870 | ID=Msa1315220;Name=Msa1315220 |
| chr8_4 | mRNA | 14494870 | 14498848 | 14494870 | ID=Msa1315220-mRNA-1;Parent=Msa1315220;Name=Msa1315220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=115|1|1|1|1|1|9|130|472 |
| chr8_4 | exon | 14494870 | 14495157 | 14494870 | ID=Msa1315220-mRNA-1:exon:5497;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14495238 | 14495350 | 14495238 | ID=Msa1315220-mRNA-1:exon:5498;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14496280 | 14496394 | 14496280 | ID=Msa1315220-mRNA-1:exon:5499;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14496472 | 14496533 | 14496472 | ID=Msa1315220-mRNA-1:exon:5500;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14496921 | 14496972 | 14496921 | ID=Msa1315220-mRNA-1:exon:5501;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14497165 | 14497276 | 14497165 | ID=Msa1315220-mRNA-1:exon:5502;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14497723 | 14497821 | 14497723 | ID=Msa1315220-mRNA-1:exon:5503;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14497909 | 14498036 | 14497909 | ID=Msa1315220-mRNA-1:exon:5504;Parent=Msa1315220-mRNA-1 |
| chr8_4 | exon | 14498154 | 14498848 | 14498154 | ID=Msa1315220-mRNA-1:exon:5505;Parent=Msa1315220-mRNA-1 |
| chr8_4 | five_prime_UTR | 14494870 | 14494984 | 14494870 | ID=Msa1315220-mRNA-1:five_prime_utr;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14494985 | 14495157 | 14494985 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14495238 | 14495350 | 14495238 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14496280 | 14496394 | 14496280 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14496472 | 14496533 | 14496472 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14496921 | 14496972 | 14496921 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14497165 | 14497276 | 14497165 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14497723 | 14497821 | 14497723 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14497909 | 14498036 | 14497909 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | CDS | 14498154 | 14498718 | 14498154 | ID=Msa1315220-mRNA-1:cds;Parent=Msa1315220-mRNA-1 |
| chr8_4 | three_prime_UTR | 14498719 | 14498848 | 14498719 | ID=Msa1315220-mRNA-1:three_prime_utr;Parent=Msa1315220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
