Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316340 | sp|Q10FT0|PUB24_ORYSJ | 26.582 | 632 | 338 | 22 | 260 | 770 | 15 | 641 | 1.33e-29 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316340 | G7LAU3 | 89.133 | 865 | 19 | 2 | 1 | 790 | 1 | 865 | 0.0 | 1536 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1176270 | Msa1316340 | 0.817291 | 3.559193e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316340 | MtrunA17_Chr8g0346441 | 89.133 | 865 | 19 | 2 | 1 | 790 | 1 | 865 | 0.0 | 1536 |
| Msa1316340 | MtrunA17_Chr7g0275961 | 64.236 | 864 | 230 | 4 | 2 | 790 | 1 | 860 | 0.0 | 1072 |
| Msa1316340 | MtrunA17_Chr1g0188041 | 30.396 | 556 | 355 | 8 | 11 | 543 | 8 | 554 | 9.98e-67 | 239 |
| Msa1316340 | MtrunA17_Chr3g0084371 | 29.091 | 495 | 281 | 9 | 345 | 771 | 184 | 676 | 1.32e-38 | 154 |
| Msa1316340 | MtrunA17_Chr3g0144071 | 25.581 | 645 | 359 | 20 | 257 | 789 | 27 | 662 | 4.33e-36 | 146 |
| Msa1316340 | MtrunA17_Chr4g0031431 | 29.818 | 275 | 159 | 7 | 263 | 510 | 259 | 526 | 1.90e-18 | 90.1 |
| Msa1316340 | MtrunA17_Chr7g0248251 | 28.464 | 267 | 170 | 5 | 261 | 509 | 276 | 539 | 3.27e-18 | 89.4 |
| Msa1316340 | MtrunA17_Chr7g0234671 | 25.862 | 290 | 177 | 9 | 263 | 540 | 82 | 345 | 2.38e-15 | 79.3 |
| Msa1316340 | MtrunA17_Chr7g0237931 | 28.475 | 295 | 172 | 9 | 261 | 543 | 239 | 506 | 2.84e-15 | 79.7 |
| Msa1316340 | MtrunA17_Chr8g0373031 | 23.229 | 353 | 217 | 9 | 23 | 329 | 1 | 345 | 3.99e-15 | 79.7 |
| Msa1316340 | MtrunA17_Chr4g0044411 | 25.816 | 337 | 210 | 8 | 261 | 564 | 275 | 604 | 7.80e-15 | 78.6 |
| Msa1316340 | MtrunA17_Chr2g0284461 | 22.735 | 563 | 354 | 17 | 89 | 612 | 112 | 632 | 9.28e-15 | 78.6 |
| Msa1316340 | MtrunA17_Chr4g0048811 | 29.500 | 200 | 110 | 7 | 261 | 440 | 7 | 195 | 6.06e-14 | 73.9 |
| Msa1316340 | MtrunA17_Chr3g0106931 | 25.959 | 339 | 200 | 13 | 19 | 338 | 6 | 312 | 8.44e-14 | 75.5 |
| Msa1316340 | MtrunA17_Chr5g0434171 | 25.078 | 319 | 193 | 13 | 263 | 540 | 39 | 352 | 1.24e-13 | 73.9 |
| Msa1316340 | MtrunA17_Chr7g0275081 | 24.161 | 298 | 187 | 6 | 257 | 541 | 76 | 347 | 2.95e-13 | 72.8 |
| Msa1316340 | MtrunA17_Chr4g0013091 | 22.676 | 441 | 272 | 16 | 88 | 478 | 145 | 566 | 8.61e-13 | 72.0 |
| Msa1316340 | MtrunA17_Chr3g0079051 | 32.335 | 167 | 89 | 5 | 174 | 328 | 653 | 807 | 1.84e-12 | 71.2 |
| Msa1316340 | MtrunA17_Chr3g0117851 | 24.742 | 291 | 188 | 7 | 263 | 553 | 279 | 538 | 1.86e-12 | 70.9 |
| Msa1316340 | MtrunA17_Chr4g0059201 | 23.894 | 339 | 218 | 9 | 239 | 540 | 300 | 635 | 4.46e-12 | 69.7 |
| Msa1316340 | MtrunA17_Chr8g0384041 | 43.077 | 65 | 37 | 0 | 263 | 327 | 14 | 78 | 7.14e-12 | 68.2 |
| Msa1316340 | MtrunA17_Chr3g0129811 | 43.077 | 65 | 37 | 0 | 263 | 327 | 87 | 151 | 1.73e-11 | 67.4 |
| Msa1316340 | MtrunA17_Chr3g0110121 | 39.726 | 73 | 44 | 0 | 262 | 334 | 39 | 111 | 1.89e-11 | 67.0 |
| Msa1316340 | MtrunA17_Chr1g0152291 | 32.857 | 140 | 84 | 3 | 263 | 402 | 49 | 178 | 2.04e-11 | 67.0 |
| Msa1316340 | MtrunA17_Chr1g0199321 | 26.923 | 338 | 193 | 11 | 263 | 579 | 251 | 555 | 2.50e-11 | 67.4 |
| Msa1316340 | MtrunA17_Chr5g0413681 | 24.111 | 253 | 169 | 9 | 93 | 331 | 109 | 352 | 2.89e-11 | 67.0 |
| Msa1316340 | MtrunA17_Chr7g0214471 | 46.269 | 67 | 35 | 1 | 261 | 326 | 597 | 663 | 3.05e-11 | 67.4 |
| Msa1316340 | MtrunA17_Chr8g0390311 | 28.467 | 137 | 94 | 3 | 194 | 329 | 333 | 466 | 3.09e-11 | 67.4 |
| Msa1316340 | MtrunA17_Chr4g0044631 | 39.474 | 76 | 39 | 1 | 257 | 325 | 5 | 80 | 3.76e-11 | 65.9 |
| Msa1316340 | MtrunA17_Chr7g0261371 | 28.824 | 170 | 111 | 3 | 162 | 331 | 154 | 313 | 8.80e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316340 | AT1G76390.1 | 32.296 | 257 | 165 | 5 | 261 | 509 | 27 | 282 | 2.65e-30 | 128 |
| Msa1316340 | AT1G76390.2 | 32.296 | 257 | 165 | 5 | 261 | 509 | 27 | 282 | 2.65e-30 | 128 |
| Msa1316340 | AT1G20780.1 | 25.637 | 628 | 359 | 19 | 261 | 786 | 25 | 646 | 1.35e-28 | 123 |
| Msa1316340 | AT1G20780.2 | 25.637 | 628 | 359 | 19 | 261 | 786 | 25 | 646 | 1.35e-28 | 123 |
| Msa1316340 | AT1G20780.3 | 25.637 | 628 | 359 | 19 | 261 | 786 | 25 | 646 | 1.35e-28 | 123 |
| Msa1316340 | AT1G68940.2 | 28.895 | 353 | 227 | 10 | 170 | 510 | 216 | 556 | 4.04e-27 | 119 |
| Msa1316340 | AT1G68940.3 | 28.895 | 353 | 227 | 10 | 170 | 510 | 163 | 503 | 5.59e-27 | 118 |
| Msa1316340 | AT1G68940.1 | 28.895 | 353 | 227 | 10 | 170 | 510 | 216 | 556 | 6.43e-27 | 118 |
| Msa1316340 | AT5G42340.1 | 25.725 | 517 | 303 | 17 | 20 | 492 | 57 | 536 | 7.14e-21 | 98.2 |
| Msa1316340 | AT1G29340.1 | 24.197 | 467 | 301 | 11 | 89 | 509 | 124 | 583 | 4.97e-18 | 89.4 |
| Msa1316340 | AT1G24330.1 | 22.853 | 652 | 365 | 20 | 20 | 543 | 3 | 644 | 2.44e-17 | 87.4 |
| Msa1316340 | AT1G24330.2 | 22.853 | 652 | 365 | 20 | 20 | 543 | 3 | 644 | 2.44e-17 | 87.4 |
| Msa1316340 | AT3G46510.1 | 22.394 | 518 | 338 | 13 | 13 | 486 | 6 | 503 | 3.07e-17 | 86.7 |
| Msa1316340 | AT1G60190.1 | 23.425 | 508 | 338 | 15 | 13 | 479 | 27 | 524 | 4.94e-17 | 86.3 |
| Msa1316340 | AT1G71020.2 | 27.300 | 337 | 207 | 9 | 261 | 564 | 97 | 428 | 7.15e-17 | 84.7 |
| Msa1316340 | AT1G71020.1 | 27.300 | 337 | 207 | 9 | 261 | 564 | 245 | 576 | 1.96e-16 | 84.0 |
| Msa1316340 | AT2G28830.1 | 29.078 | 282 | 171 | 7 | 256 | 510 | 181 | 460 | 6.21e-16 | 82.4 |
| Msa1316340 | AT5G01830.1 | 23.195 | 457 | 294 | 17 | 88 | 505 | 109 | 547 | 5.33e-15 | 79.7 |
| Msa1316340 | AT1G23030.1 | 26.316 | 266 | 174 | 5 | 263 | 510 | 245 | 506 | 1.45e-14 | 78.2 |
| Msa1316340 | AT1G67530.3 | 24.419 | 344 | 212 | 10 | 25 | 329 | 8 | 342 | 2.33e-14 | 77.0 |
| Msa1316340 | AT1G67530.2 | 24.198 | 343 | 214 | 9 | 25 | 329 | 8 | 342 | 4.42e-14 | 76.6 |
| Msa1316340 | AT1G67530.1 | 24.198 | 343 | 214 | 9 | 25 | 329 | 8 | 342 | 4.42e-14 | 76.6 |
| Msa1316340 | AT1G67530.4 | 24.198 | 343 | 214 | 9 | 25 | 329 | 8 | 342 | 4.42e-14 | 76.6 |
| Msa1316340 | AT1G49780.1 | 42.105 | 76 | 37 | 1 | 257 | 325 | 5 | 80 | 5.95e-13 | 72.0 |
| Msa1316340 | AT3G54790.3 | 25.279 | 269 | 160 | 10 | 91 | 348 | 86 | 324 | 6.60e-13 | 72.8 |
| Msa1316340 | AT3G54790.1 | 25.279 | 269 | 160 | 10 | 91 | 348 | 86 | 324 | 6.60e-13 | 72.8 |
| Msa1316340 | AT3G54790.2 | 25.279 | 269 | 160 | 10 | 91 | 348 | 50 | 288 | 8.42e-13 | 72.4 |
| Msa1316340 | AT4G36550.1 | 45.070 | 71 | 39 | 0 | 261 | 331 | 221 | 291 | 1.74e-12 | 71.6 |
| Msa1316340 | AT3G07360.1 | 23.529 | 374 | 233 | 13 | 187 | 539 | 4 | 345 | 4.03e-12 | 69.7 |
| Msa1316340 | AT5G51270.2 | 36.937 | 111 | 52 | 3 | 223 | 329 | 708 | 804 | 1.28e-11 | 68.9 |
| Msa1316340 | AT5G51270.1 | 36.937 | 111 | 52 | 3 | 223 | 329 | 708 | 804 | 1.28e-11 | 68.9 |
| Msa1316340 | AT1G10560.1 | 24.784 | 347 | 220 | 11 | 14 | 332 | 28 | 361 | 1.92e-11 | 68.2 |
| Msa1316340 | AT3G61390.4 | 42.647 | 68 | 39 | 0 | 258 | 325 | 277 | 344 | 2.10e-11 | 67.0 |
| Msa1316340 | AT3G61390.2 | 42.647 | 68 | 39 | 0 | 258 | 325 | 352 | 419 | 3.03e-11 | 67.0 |
| Msa1316340 | AT5G67340.1 | 21.676 | 549 | 344 | 15 | 50 | 548 | 48 | 560 | 3.06e-11 | 67.4 |
| Msa1316340 | AT5G67340.2 | 21.676 | 549 | 344 | 15 | 50 | 548 | 48 | 560 | 3.06e-11 | 67.4 |
| Msa1316340 | AT2G23140.2 | 29.143 | 175 | 111 | 4 | 156 | 329 | 138 | 300 | 3.25e-11 | 67.4 |
| Msa1316340 | AT2G23140.4 | 29.143 | 175 | 111 | 4 | 156 | 329 | 138 | 300 | 3.25e-11 | 67.4 |
| Msa1316340 | AT2G23140.1 | 29.143 | 175 | 111 | 4 | 156 | 329 | 141 | 303 | 3.40e-11 | 67.4 |
| Msa1316340 | AT5G64660.1 | 41.538 | 65 | 38 | 0 | 263 | 327 | 14 | 78 | 4.82e-11 | 66.2 |
| Msa1316340 | AT5G09800.1 | 41.538 | 65 | 38 | 0 | 263 | 327 | 15 | 79 | 6.61e-11 | 65.9 |
Find 171 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATTCACTTCTTCAAAA+TGG | 0.172179 | 8_4:+16606457 | Msa1316340:five_prime_UTR |
| TTCTCGCGCCAAATCATATT+TGG | 0.186259 | 8_4:-16608523 | None:intergenic |
| TGAGTTATCTGATCAATTTC+TGG | 0.187668 | 8_4:-16610290 | None:intergenic |
| TAAGGAACTTAGCTCTTATT+TGG | 0.210368 | 8_4:+16607230 | Msa1316340:CDS |
| TATGGAGAAAGCTGGATTTA+AGG | 0.218387 | 8_4:+16607539 | Msa1316340:CDS |
| GCATACACACATCAAGTTTA+TGG | 0.223246 | 8_4:+16609286 | Msa1316340:CDS |
| TATCAGATTTAGACCTTGTT+TGG | 0.255235 | 8_4:+16606872 | Msa1316340:five_prime_UTR |
| ATTGATTCATGGGAAGAAAA+AGG | 0.260650 | 8_4:+16607053 | Msa1316340:five_prime_UTR |
| CAAGTTCTTATACAAATTCT+TGG | 0.261077 | 8_4:+16608242 | Msa1316340:CDS |
| TTCTCAGCTCCAAGCGAAAT+TGG | 0.265955 | 8_4:+16610620 | Msa1316340:CDS |
| ACAGCTTATTTAAGTTCTTA+TGG | 0.270154 | 8_4:+16606899 | Msa1316340:five_prime_UTR |
| TCTATCTTTCCATTCTTCTA+TGG | 0.273578 | 8_4:-16608072 | None:intergenic |
| TTTAATTTCTCCCAATATTC+CGG | 0.290109 | 8_4:-16607502 | None:intergenic |
| AAGCAAAGAAGAGTTCAATT+TGG | 0.293163 | 8_4:-16606437 | None:intergenic |
| ACTTTATAGCACTTGCTCTT+AGG | 0.295870 | 8_4:-16610121 | None:intergenic |
| AAGTCCATTTCTCTTTAAAC+TGG | 0.307135 | 8_4:-16609208 | None:intergenic |
| GTTCTATGTAGAAAACAATT+TGG | 0.307397 | 8_4:+16606800 | Msa1316340:intron |
| TGAATTATCCAAATATGATT+TGG | 0.309894 | 8_4:+16608515 | Msa1316340:CDS |
| GGTTGTGTCACACTGATTAA+AGG | 0.311802 | 8_4:-16609417 | None:intergenic |
| TTCCTCAATTCTTTCAAAAT+CGG | 0.318543 | 8_4:-16607264 | None:intergenic |
| TCAAGGTTGCATACTTCTAT+TGG | 0.318559 | 8_4:+16608560 | Msa1316340:CDS |
| GGTCTTTCAGCCGGAATATT+GGG | 0.325125 | 8_4:+16607492 | Msa1316340:CDS |
| TTTGCGAAACGGCAATCTTT+AGG | 0.329672 | 8_4:+16607846 | Msa1316340:CDS |
| GGATCAAATCATTGCTTTGT+TGG | 0.331319 | 8_4:+16607776 | Msa1316340:CDS |
| TGCTCGTGTTGATAAGAAAA+AGG | 0.337238 | 8_4:+16607737 | Msa1316340:CDS |
| AATATTGGGAGAAATTAAAA+AGG | 0.337633 | 8_4:+16607506 | Msa1316340:CDS |
| TCACACAACCTAACCAATTC+TGG | 0.340227 | 8_4:-16610083 | None:intergenic |
| AGGTCTTTCAGCCGGAATAT+TGG | 0.342044 | 8_4:+16607491 | Msa1316340:CDS |
| TATGCAAATTGCAACCCTTT+TGG | 0.346687 | 8_4:+16607013 | Msa1316340:five_prime_UTR |
| TTGTTAGTGTTATTGATTCA+TGG | 0.348618 | 8_4:+16607042 | Msa1316340:five_prime_UTR |
| ATCTTTAGGTACTCGAATCT+TGG | 0.353618 | 8_4:+16607860 | Msa1316340:CDS |
| TGCAGCAAGTTGCATAATTA+TGG | 0.355094 | 8_4:-16609322 | None:intergenic |
| TTTATTTGTTAATGAATTGT+AGG | 0.364173 | 8_4:+16607394 | Msa1316340:CDS |
| TCTCAAATCATAGAAACTAT+TGG | 0.367335 | 8_4:+16607159 | Msa1316340:CDS |
| TGAACATATTTATAAATGAT+TGG | 0.370188 | 8_4:-16610338 | None:intergenic |
| CTTCTTCCTTTAGCCGCATC+AGG | 0.373069 | 8_4:+16607471 | Msa1316340:CDS |
| AGAAGAAGAGGAAGAGGAAG+AGG | 0.377053 | 8_4:+16612532 | Msa1316340:three_prime_UTR |
| GGAGGAAGAGGAAGAGGAAG+AGG | 0.388400 | 8_4:+16612466 | Msa1316340:intron |
| AGAAGAGGAGGAAGAGGAAG+AGG | 0.394447 | 8_4:+16612460 | Msa1316340:intron |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 8_4:+16612472 | Msa1316340:intron |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 8_4:+16612478 | Msa1316340:three_prime_UTR |
| AGAGGAAGAGGAAGAGGAAG+AGG | 0.394447 | 8_4:+16612484 | Msa1316340:three_prime_UTR |
| AGAGGAAGAAGAAGAGGAAG+AGG | 0.396271 | 8_4:+16612502 | Msa1316340:three_prime_UTR |
| AGAAGAGGAAGAAGAGGAAG+AGG | 0.396271 | 8_4:+16612577 | Msa1316340:three_prime_UTR |
| ATTCATTGAACAGAAGGGTT+TGG | 0.398094 | 8_4:+16606985 | Msa1316340:five_prime_UTR |
| GAATCGATCGTCCATTCTCT+TGG | 0.399241 | 8_4:+16608450 | Msa1316340:CDS |
| CTATCCAGTTTAAAGAGAAA+TGG | 0.399393 | 8_4:+16609204 | Msa1316340:CDS |
| AGACCGATTCCAAAGCAAAA+AGG | 0.400571 | 8_4:+16610584 | Msa1316340:CDS |
| GAAAATCGAGTCAGGGATAA+GGG | 0.403660 | 8_4:+16607590 | Msa1316340:CDS |
| CATACACACATCAAGTTTAT+GGG | 0.404356 | 8_4:+16609287 | Msa1316340:CDS |
| CTTCATCAGATGAGGATTGT+AGG | 0.416308 | 8_4:-16610229 | None:intergenic |
| CAGCTATACCAGAATTGGTT+AGG | 0.419391 | 8_4:+16610075 | Msa1316340:CDS |
| CACTAACAAATGTTGCCAAA+AGG | 0.419520 | 8_4:-16607028 | None:intergenic |
| CAAAAGGGTTCTCAAATTCA+TGG | 0.420706 | 8_4:+16606553 | Msa1316340:five_prime_UTR |
| TGATCTGATGAAGTTTCAAC+AGG | 0.425758 | 8_4:-16607933 | None:intergenic |
| AGCTGCAAACCTACTTGCTC+TGG | 0.425914 | 8_4:+16607350 | Msa1316340:CDS |
| CTAGTAACAAAACCGGTGTT+TGG | 0.427966 | 8_4:-16609365 | None:intergenic |
| TCTGATCAATTTCTGGAAGA+TGG | 0.428541 | 8_4:-16610283 | None:intergenic |
| AGAGGAAGAAGAGGAAGAAG+AGG | 0.429220 | 8_4:+16612571 | Msa1316340:three_prime_UTR |
| GTGCTCAGCTATACCAGAAT+TGG | 0.431004 | 8_4:+16610070 | Msa1316340:intron |
| TAGATTCTTAAGAGCCTTTG+TGG | 0.431900 | 8_4:-16609184 | None:intergenic |
| AGAAAATCGAGTCAGGGATA+AGG | 0.432371 | 8_4:+16607589 | Msa1316340:CDS |
| TATTTCAGTTTCCTTTCGTT+CGG | 0.443580 | 8_4:-16607822 | None:intergenic |
| AGAAGAGGAAGAGGAAGAAG+AGG | 0.446614 | 8_4:+16612586 | Msa1316340:three_prime_UTR |
| ACTAACAAATGTTGCCAAAA+GGG | 0.447272 | 8_4:-16607027 | None:intergenic |
| TCCTATCACACATGATGTTA+TGG | 0.452740 | 8_4:+16607905 | Msa1316340:CDS |
| TCTCTCTTTAAGTCTTTCTC+AGG | 0.453038 | 8_4:+16606582 | Msa1316340:five_prime_UTR |
| TTCGCGATTCATAATATCAA+TGG | 0.454754 | 8_4:-16607322 | None:intergenic |
| AAAGGCTGAAGCTATGCAAA+TGG | 0.456067 | 8_4:+16607755 | Msa1316340:CDS |
| AGAAGAAAATAGGTGCAAGT+TGG | 0.458164 | 8_4:-16606665 | None:intergenic |
| AGAGGACGAAGAGGAAGAAG+AGG | 0.458393 | 8_4:+16612643 | Msa1316340:three_prime_UTR |
| AATCTCATTGCTAACGCTGT+TGG | 0.459825 | 8_4:+16607651 | Msa1316340:CDS |
| AGAAGAAGAGGAGGAAGAAG+AGG | 0.460077 | 8_4:+16612697 | Msa1316340:three_prime_UTR |
| AGACGAAGAGGAAGAAGAAG+AGG | 0.462159 | 8_4:+16612739 | Msa1316340:three_prime_UTR |
| CCATTCTCTTGGACGACGTC+AGG | 0.464203 | 8_4:+16608461 | Msa1316340:CDS |
| AGAAGAAGAAGAGGAAGAAG+AGG | 0.467350 | 8_4:+16612562 | Msa1316340:three_prime_UTR |
| AGAGGAAGAGGAAGAAGAAG+AGG | 0.467774 | 8_4:+16612496 | Msa1316340:three_prime_UTR |
| ATCAACATTCTCTACTATGA+TGG | 0.468562 | 8_4:-16610177 | None:intergenic |
| GGAAGACGAAGAAGAAGAAG+AGG | 0.469000 | 8_4:+16612553 | Msa1316340:three_prime_UTR |
| GGAAGAAGAGGAAGAAGAAG+AGG | 0.470684 | 8_4:+16612598 | Msa1316340:three_prime_UTR |
| GGAAGAAGAGGAAGAAGAAG+AGG | 0.470684 | 8_4:+16612655 | Msa1316340:three_prime_UTR |
| ACCATAACATCATGTGTGAT+AGG | 0.470871 | 8_4:-16607906 | None:intergenic |
| GTTGTGTCACACTGATTAAA+GGG | 0.473597 | 8_4:-16609416 | None:intergenic |
| TGGATTTAAGGCTGCGGTAG+CGG | 0.475565 | 8_4:+16607551 | Msa1316340:CDS |
| CTCAAAACCGATGTATCTAA+AGG | 0.478675 | 8_4:-16608026 | None:intergenic |
| AGACGAAGAGGAAGAAGAAG+AGG | 0.479553 | 8_4:+16612685 | Msa1316340:three_prime_UTR |
| ATTGTAGGTCGATTGTAAAT+CGG | 0.479909 | 8_4:+16607409 | Msa1316340:CDS |
| GAAGAGTTCAATTTGGAAAG+TGG | 0.480659 | 8_4:-16606430 | None:intergenic |
| GAACACATTGGAAAAGTTCA+AGG | 0.482125 | 8_4:+16608543 | Msa1316340:CDS |
| CGAAGAGGAAGAAGAAGAGG+AGG | 0.483990 | 8_4:+16612688 | Msa1316340:three_prime_UTR |
| TCACACTGATTAAAGGGAAA+AGG | 0.486884 | 8_4:-16609410 | None:intergenic |
| TAGAGATGCAACTGATGTAT+TGG | 0.486984 | 8_4:+16608617 | Msa1316340:CDS |
| GGAAGAAGAGGAAGAAGAAG+AGG | 0.488078 | 8_4:+16612709 | Msa1316340:three_prime_UTR |
| TGTGATAATATGGAGAAAGC+TGG | 0.488266 | 8_4:+16607531 | Msa1316340:CDS |
| GTGAGCAGAGAGAGCAACAC+AGG | 0.492544 | 8_4:+16608192 | Msa1316340:CDS |
| AGAGGAAATACATTCTGCTA+TGG | 0.492784 | 8_4:+16610250 | Msa1316340:CDS |
| CTATTGGTGACTATGTCTAA+TGG | 0.493151 | 8_4:+16608576 | Msa1316340:CDS |
| AGAGGAAGAAGAAGACGAAG+AGG | 0.494912 | 8_4:+16612616 | Msa1316340:three_prime_UTR |
| AGAGGAAGAAGAAGACGAAG+AGG | 0.494912 | 8_4:+16612673 | Msa1316340:three_prime_UTR |
| AGAGGAAGAAGAAGACGAAG+AGG | 0.494912 | 8_4:+16612727 | Msa1316340:three_prime_UTR |
| AGAGAAGTGCAATAGAGAAG+TGG | 0.495497 | 8_4:+16607964 | Msa1316340:CDS |
| CCTGACGTCGTCCAAGAGAA+TGG | 0.499586 | 8_4:-16608461 | None:intergenic |
| TTACTGCAACGTCTCTCGAC+AGG | 0.500509 | 8_4:+16608702 | Msa1316340:CDS |
| GTTCGAGAAACCGTGACATA+AGG | 0.502733 | 8_4:+16608264 | Msa1316340:CDS |
| ATAGAGAAGTGGTTTGAAGA+AGG | 0.503302 | 8_4:+16607975 | Msa1316340:CDS |
| GCCGCATCAGGTCTTTCAGC+CGG | 0.509865 | 8_4:+16607483 | Msa1316340:CDS |
| AGAGAGAGCAACACAGGGAA+TGG | 0.509905 | 8_4:+16608198 | Msa1316340:CDS |
| AGAAACATTCATTGAACAGA+AGG | 0.511801 | 8_4:+16606979 | Msa1316340:five_prime_UTR |
| TGTTAGTGTTATTGATTCAT+GGG | 0.511805 | 8_4:+16607043 | Msa1316340:five_prime_UTR |
| GAAAGACCTGATGCGGCTAA+AGG | 0.513497 | 8_4:-16607477 | None:intergenic |
| AACTGAAATACTTTGCGAAA+CGG | 0.517151 | 8_4:+16607835 | Msa1316340:CDS |
| TTTCCTTTCGTTCGGTGATG+AGG | 0.520051 | 8_4:-16607814 | None:intergenic |
| TCAGAATCTAGTAACAAAAC+CGG | 0.522197 | 8_4:-16609372 | None:intergenic |
| AGTTACTCCTTTGAAGATCT+CGG | 0.524906 | 8_4:-16610373 | None:intergenic |
| ACAATCCTCATCTGATGAAG+AGG | 0.529667 | 8_4:+16610232 | Msa1316340:CDS |
| AAAAGATAATGAAGAAGCTA+AGG | 0.530212 | 8_4:+16608319 | Msa1316340:CDS |
| TGAAACAATCCATAGAAGAA+TGG | 0.531982 | 8_4:+16608063 | Msa1316340:CDS |
| GAGGAAATACATTCTGCTAT+GGG | 0.532753 | 8_4:+16610251 | Msa1316340:CDS |
| ACTTTACAGCCAATTTCGCT+TGG | 0.534158 | 8_4:-16610629 | None:intergenic |
| AGAAGACGAAGAGGAAGAAG+AGG | 0.534445 | 8_4:+16612625 | Msa1316340:three_prime_UTR |
| TTGATGTGTGTATGCTATGA+TGG | 0.534750 | 8_4:-16609278 | None:intergenic |
| TCTAAAGGAATCAGCGTCAA+AGG | 0.539843 | 8_4:-16608011 | None:intergenic |
| AAATGAGAAGTCGACGATGA+AGG | 0.546935 | 8_4:+16607680 | Msa1316340:CDS |
| TATTTCCTCTTCATCAGATG+AGG | 0.554394 | 8_4:-16610237 | None:intergenic |
| GAGATCAAGCAACGGTCGCA+CGG | 0.556041 | 8_4:-16609250 | None:intergenic |
| TGAGAAATTGCAGTTGAGGT+AGG | 0.556553 | 8_4:-16607141 | None:intergenic |
| GAAACATTCATTGAACAGAA+GGG | 0.558272 | 8_4:+16606980 | Msa1316340:five_prime_UTR |
| CAGTTCCAACACACTTGGAG+TGG | 0.563324 | 8_4:+16610432 | Msa1316340:CDS |
| ACTCAATGGATTCTAGATGC+TGG | 0.565189 | 8_4:+16610308 | Msa1316340:CDS |
| GCTGATTCCTTTAGATACAT+CGG | 0.566870 | 8_4:+16608019 | Msa1316340:CDS |
| TTAGTGCAGTTGCTTGAAAG+TGG | 0.568411 | 8_4:+16610491 | Msa1316340:CDS |
| CAGCCTCATCACCGAACGAA+AGG | 0.569243 | 8_4:+16607811 | Msa1316340:CDS |
| TGATCAGAATGTTATACTGA+TGG | 0.569744 | 8_4:+16608656 | Msa1316340:CDS |
| TTAATCAGTGTGACACAACC+TGG | 0.570231 | 8_4:+16609420 | Msa1316340:CDS |
| TTCTCTTGGACGACGTCAGG+AGG | 0.572987 | 8_4:+16608464 | Msa1316340:CDS |
| GATTTGAGAAATTGCAGTTG+AGG | 0.578462 | 8_4:-16607145 | None:intergenic |
| ATTGCTGCATTGTAAGATGA+TGG | 0.578760 | 8_4:+16607095 | Msa1316340:exon |
| AGAGGAAGAAGAGGACGAAG+AGG | 0.580660 | 8_4:+16612634 | Msa1316340:three_prime_UTR |
| AACTTAGTCGAGAAAGCAGT+CGG | 0.581164 | 8_4:+16610392 | Msa1316340:CDS |
| TGGAACTGTAAAACGACGTA+AGG | 0.584828 | 8_4:-16610417 | None:intergenic |
| AATGGCACGGTTGAATGCCT+CGG | 0.584864 | 8_4:-16607304 | None:intergenic |
| AAGGAGATAAGCAAGGCGCT+TGG | 0.588368 | 8_4:+16607447 | Msa1316340:CDS |
| TGTGTATGCTATGATGGTAA+AGG | 0.588633 | 8_4:-16609272 | None:intergenic |
| TTGGACGACGTCAGGAGGAG+AGG | 0.590135 | 8_4:+16608469 | Msa1316340:CDS |
| TCCGGCTGAAAGACCTGATG+CGG | 0.596788 | 8_4:-16607484 | None:intergenic |
| GAATGTTATACTGATGGCAA+AGG | 0.598582 | 8_4:+16608662 | Msa1316340:CDS |
| ATATTCAGAGAAAGCAAACA+AGG | 0.601328 | 8_4:-16606628 | None:intergenic |
| GGACAATAAAATGACTGTAG+AGG | 0.605850 | 8_4:-16607885 | None:intergenic |
| GAAAGCTGGATTTAAGGCTG+CGG | 0.609553 | 8_4:+16607545 | Msa1316340:CDS |
| GTAGAGACCGAGATCTTCAA+AGG | 0.609913 | 8_4:+16610366 | Msa1316340:CDS |
| AAATTGATCAGATAACTCAA+TGG | 0.612214 | 8_4:+16610294 | Msa1316340:CDS |
| GTACATCATTAGCACTGCAT+AGG | 0.612506 | 8_4:-16607188 | None:intergenic |
| GAGCTCGATTCCTTATGTCA+CGG | 0.612669 | 8_4:-16608274 | None:intergenic |
| ATTTATAAATATGTTCAAGA+CGG | 0.616007 | 8_4:+16610344 | Msa1316340:CDS |
| ATAAGCTGTTTATCCAAACA+AGG | 0.616722 | 8_4:-16606885 | None:intergenic |
| ACTTGAAATGATTCGACAAG+GGG | 0.629255 | 8_4:+16609227 | Msa1316340:CDS |
| GGTGAAAACAGTGGCCACAA+AGG | 0.630926 | 8_4:+16609170 | Msa1316340:intron |
| GACTTGAAATGATTCGACAA+GGG | 0.634541 | 8_4:+16609226 | Msa1316340:CDS |
| CTCTCAAGATGTCCAAACAC+CGG | 0.634839 | 8_4:+16609353 | Msa1316340:CDS |
| GGACTTGAAATGATTCGACA+AGG | 0.635847 | 8_4:+16609225 | Msa1316340:CDS |
| TACGACATTCCAGAGCAAGT+AGG | 0.646446 | 8_4:-16607359 | None:intergenic |
| GATTCATAATATCAATGGCA+CGG | 0.654224 | 8_4:-16607317 | None:intergenic |
| TATCACACATGATGTTATGG+TGG | 0.655301 | 8_4:+16607908 | Msa1316340:CDS |
| GATTTGGCGCGAGAACACAT+TGG | 0.659835 | 8_4:+16608531 | Msa1316340:CDS |
| CAGGGAATGGATGATACTTG+AGG | 0.659956 | 8_4:+16608211 | Msa1316340:CDS |
| TGAGCAGAGAGAGCAACACA+GGG | 0.661066 | 8_4:+16608193 | Msa1316340:CDS |
| TCACACGAAGGAGATAAGCA+AGG | 0.684993 | 8_4:+16607440 | Msa1316340:CDS |
| TATTCAGAGAAAGCAAACAA+GGG | 0.697299 | 8_4:-16606627 | None:intergenic |
| TCGGTTAGAAAATCACACGA+AGG | 0.714647 | 8_4:+16607428 | Msa1316340:CDS |
| GGAATGTCGTAAGAAGAGCA+AGG | 0.723044 | 8_4:+16607371 | Msa1316340:CDS |
| TGGTAAAGGAGATCAAGCAA+CGG | 0.735449 | 8_4:-16609258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATGTTAAACTAAAAT+GGG | - | chr8_4:16611869-16611888 | None:intergenic | 10.0% |
| !! | TATAATATGTTAAACTAAAA+TGG | - | chr8_4:16611870-16611889 | None:intergenic | 10.0% |
| !!! | TTTATTTGTTAATGAATTGT+AGG | + | chr8_4:16607394-16607413 | Msa1316340:CDS | 15.0% |
| !! | ACTAGTATTAAAATAGAAAA+TGG | - | chr8_4:16608365-16608384 | None:intergenic | 15.0% |
| !!! | AATGACATTTTATAATTTTG+GGG | - | chr8_4:16609645-16609664 | None:intergenic | 15.0% |
| !!! | GAATGACATTTTATAATTTT+GGG | - | chr8_4:16609646-16609665 | None:intergenic | 15.0% |
| !!! | TGAATGACATTTTATAATTT+TGG | - | chr8_4:16609647-16609666 | None:intergenic | 15.0% |
| !! | GTTAACTGAATATAAAATTT+AGG | - | chr8_4:16609874-16609893 | None:intergenic | 15.0% |
| !! | TGAACATATTTATAAATGAT+TGG | - | chr8_4:16610341-16610360 | None:intergenic | 15.0% |
| !! | ATTTATAAATATGTTCAAGA+CGG | + | chr8_4:16610344-16610363 | Msa1316340:CDS | 15.0% |
| !! | ATTGGATATTATTATATTTC+AGG | - | chr8_4:16611121-16611140 | None:intergenic | 15.0% |
| !!! | TTTAGCTATTTTATTTCAAT+TGG | - | chr8_4:16611139-16611158 | None:intergenic | 15.0% |
| !! | TGAAATAAAATAGCTAAAAA+AGG | + | chr8_4:16611141-16611160 | Msa1316340:intron | 15.0% |
| !! | TAATATGTTAAACTAAAATG+GGG | - | chr8_4:16611868-16611887 | None:intergenic | 15.0% |
| !! | AAACAAAATAATAAAGTTCA+AGG | + | chr8_4:16612210-16612229 | Msa1316340:intron | 15.0% |
| !! | GACATAAAAAAGAAGAAAAT+AGG | - | chr8_4:16606678-16606697 | None:intergenic | 20.0% |
| !!! | TGTGAATAAAGATAGTTTTA+AGG | + | chr8_4:16607212-16607231 | Msa1316340:CDS | 20.0% |
| !! | AATATTGGGAGAAATTAAAA+AGG | + | chr8_4:16607506-16607525 | Msa1316340:CDS | 20.0% |
| !! | TAAAAAGGTTTGTGATAATA+TGG | + | chr8_4:16607521-16607540 | Msa1316340:CDS | 20.0% |
| !! | AAAGAAAAAATACATCAGTT+TGG | + | chr8_4:16608122-16608141 | Msa1316340:CDS | 20.0% |
| !! | TGAATTATCCAAATATGATT+TGG | + | chr8_4:16608515-16608534 | Msa1316340:CDS | 20.0% |
| !! | AATTTCAACAACAATTTAGA+TGG | + | chr8_4:16608877-16608896 | Msa1316340:intron | 20.0% |
| !! | TGTCATATTTATTAATCATC+AGG | - | chr8_4:16608938-16608957 | None:intergenic | 20.0% |
| !! | TATAATGACATTAAACAATG+TGG | - | chr8_4:16609000-16609019 | None:intergenic | 20.0% |
| !! | TCGAAAACTATTTATAACTA+CGG | - | chr8_4:16609544-16609563 | None:intergenic | 20.0% |
| !! | CTAATTTACCTATGAAATTT+AGG | + | chr8_4:16609774-16609793 | Msa1316340:intron | 20.0% |
| !! | ATTTGCAAGTAATTAATATC+TGG | - | chr8_4:16609837-16609856 | None:intergenic | 20.0% |
| !! | TCAACAATAAAGTTAACAAA+TGG | + | chr8_4:16609910-16609929 | Msa1316340:intron | 20.0% |
| !!! | GATTGAAACTTTAAAATCTT+TGG | + | chr8_4:16609941-16609960 | Msa1316340:intron | 20.0% |
| !!! | GTTAGTTTTAGCATAATATT+TGG | - | chr8_4:16611212-16611231 | None:intergenic | 20.0% |
| !!! | ATAATATCGGTTACTTTTAT+TGG | - | chr8_4:16611457-16611476 | None:intergenic | 20.0% |
| !!! | TATCGATTACTTTAGTATTA+AGG | - | chr8_4:16611496-16611515 | None:intergenic | 20.0% |
| !! | AAATTAACAATTTAAGCACT+TGG | + | chr8_4:16611566-16611585 | Msa1316340:intron | 20.0% |
| !! | AATTAACAATTTAAGCACTT+GGG | + | chr8_4:16611567-16611586 | Msa1316340:intron | 20.0% |
| !!! | ATGAATTATTTCCTCTTTTT+AGG | + | chr8_4:16611747-16611766 | Msa1316340:intron | 20.0% |
| !!! | TGAATTATTTCCTCTTTTTA+GGG | + | chr8_4:16611748-16611767 | Msa1316340:intron | 20.0% |
| !!! | TTTTACTCTAAAGACTTTTA+AGG | + | chr8_4:16611929-16611948 | Msa1316340:intron | 20.0% |
| !!! | TTTACTCTAAAGACTTTTAA+GGG | + | chr8_4:16611930-16611949 | Msa1316340:intron | 20.0% |
| !! | TTTCACAATAAAACATGATA+TGG | + | chr8_4:16612049-16612068 | Msa1316340:intron | 20.0% |
| !! | TTCACAATAAAACATGATAT+GGG | + | chr8_4:16612050-16612069 | Msa1316340:intron | 20.0% |
| !!! | CTTGTTTTTATTGGAAATTA+TGG | - | chr8_4:16612159-16612178 | None:intergenic | 20.0% |
| !!! | ATTAAGTAGCTTGTTTTTAT+TGG | - | chr8_4:16612168-16612187 | None:intergenic | 20.0% |
| ! | ATCTTAGCAAAAACAATGAA+AGG | - | chr8_4:16606504-16606523 | None:intergenic | 25.0% |
| !! | AAAGTTTCTTTTGCTCAAAA+GGG | + | chr8_4:16606538-16606557 | Msa1316340:five_prime_UTR | 25.0% |
| ! | GTTCTATGTAGAAAACAATT+TGG | + | chr8_4:16606800-16606819 | Msa1316340:intron | 25.0% |
| !! | ACAGCTTATTTAAGTTCTTA+TGG | + | chr8_4:16606899-16606918 | Msa1316340:five_prime_UTR | 25.0% |
| !!! | TTGTTAGTGTTATTGATTCA+TGG | + | chr8_4:16607042-16607061 | Msa1316340:five_prime_UTR | 25.0% |
| !!! | TGTTAGTGTTATTGATTCAT+GGG | + | chr8_4:16607043-16607062 | Msa1316340:five_prime_UTR | 25.0% |
| ! | TCTCAAATCATAGAAACTAT+TGG | + | chr8_4:16607159-16607178 | Msa1316340:CDS | 25.0% |
| ! | TTCCTCAATTCTTTCAAAAT+CGG | - | chr8_4:16607267-16607286 | None:intergenic | 25.0% |
| !! | TTTAATTTCTCCCAATATTC+CGG | - | chr8_4:16607505-16607524 | None:intergenic | 25.0% |
| !!! | GATTGTTTCAAAGTTTTGTT+AGG | - | chr8_4:16608053-16608072 | None:intergenic | 25.0% |
| ! | CAAGTTCTTATACAAATTCT+TGG | + | chr8_4:16608242-16608261 | Msa1316340:CDS | 25.0% |
| ! | AAAAGATAATGAAGAAGCTA+AGG | + | chr8_4:16608319-16608338 | Msa1316340:CDS | 25.0% |
| ! | AACAATTTAGATGGTTAACA+CGG | + | chr8_4:16608886-16608905 | Msa1316340:intron | 25.0% |
| !! | TTATACATGATTTTCTATGC+AGG | + | chr8_4:16609015-16609034 | Msa1316340:intron | 25.0% |
| ! | AGATGATGTAAAGATGATTA+TGG | + | chr8_4:16609041-16609060 | Msa1316340:intron | 25.0% |
| !! | TTGCCAATTTTCAAAATTGA+GGG | - | chr8_4:16609616-16609635 | None:intergenic | 25.0% |
| !!! | TAAATTAGTTTCTAGTGAAC+TGG | - | chr8_4:16609762-16609781 | None:intergenic | 25.0% |
| !!! | TATAAAGTTGTTTTCATGCT+TGG | + | chr8_4:16610136-16610155 | Msa1316340:CDS | 25.0% |
| ! | AAATTGATCAGATAACTCAA+TGG | + | chr8_4:16610294-16610313 | Msa1316340:CDS | 25.0% |
| ! | TTTCAGGAATAAATATTCGA+TGG | - | chr8_4:16611105-16611124 | None:intergenic | 25.0% |
| ! | ACAAACAAATATTCAAGTGT+GGG | - | chr8_4:16611258-16611277 | None:intergenic | 25.0% |
| ! | GCAACAAAAAGATTAACATA+TGG | + | chr8_4:16611305-16611324 | Msa1316340:intron | 25.0% |
| ! | TAAAAGTAACCGATATTATG+AGG | + | chr8_4:16611458-16611477 | Msa1316340:intron | 25.0% |
| ! | CTCTTATATGAAATGAAGAA+AGG | - | chr8_4:16611524-16611543 | None:intergenic | 25.0% |
| ! | ATTAACAATTTAAGCACTTG+GGG | + | chr8_4:16611568-16611587 | Msa1316340:intron | 25.0% |
| !! | TTTAGAACTTAAGTTCGATT+AGG | + | chr8_4:16611772-16611791 | Msa1316340:intron | 25.0% |
| ! | TTAGAACTTAAGTTCGATTA+GGG | + | chr8_4:16611773-16611792 | Msa1316340:intron | 25.0% |
| ! | AAAGTAGTATAAGTTTGTGT+GGG | - | chr8_4:16611912-16611931 | None:intergenic | 25.0% |
| ! | AAAAGTAGTATAAGTTTGTG+TGG | - | chr8_4:16611913-16611932 | None:intergenic | 25.0% |
| ! | TTCTAACTTTAATGGTAACT+TGG | - | chr8_4:16611957-16611976 | None:intergenic | 25.0% |
| !!! | TTTTGTTGTCTTCTCTTAAA+AGG | - | chr8_4:16612128-16612147 | None:intergenic | 25.0% |
| ! | TAATAAAGTTCAAGGAAGTT+TGG | + | chr8_4:16612218-16612237 | Msa1316340:intron | 25.0% |
| ! | CTTCTTCTTCTTAATCATTA+AGG | - | chr8_4:16612301-16612320 | None:intergenic | 25.0% |
| AAGCAAAGAAGAGTTCAATT+TGG | - | chr8_4:16606440-16606459 | None:intergenic | 30.0% | |
| CTTCATTCACTTCTTCAAAA+TGG | + | chr8_4:16606457-16606476 | Msa1316340:five_prime_UTR | 30.0% | |
| ! | CAAAGTTTCTTTTGCTCAAA+AGG | + | chr8_4:16606537-16606556 | Msa1316340:five_prime_UTR | 30.0% |
| TATTCAGAGAAAGCAAACAA+GGG | - | chr8_4:16606630-16606649 | None:intergenic | 30.0% | |
| ATATTCAGAGAAAGCAAACA+AGG | - | chr8_4:16606631-16606650 | None:intergenic | 30.0% | |
| TATCAGATTTAGACCTTGTT+TGG | + | chr8_4:16606872-16606891 | Msa1316340:five_prime_UTR | 30.0% | |
| ATAAGCTGTTTATCCAAACA+AGG | - | chr8_4:16606888-16606907 | None:intergenic | 30.0% | |
| AGAAACATTCATTGAACAGA+AGG | + | chr8_4:16606979-16606998 | Msa1316340:five_prime_UTR | 30.0% | |
| GAAACATTCATTGAACAGAA+GGG | + | chr8_4:16606980-16606999 | Msa1316340:five_prime_UTR | 30.0% | |
| ACTAACAAATGTTGCCAAAA+GGG | - | chr8_4:16607030-16607049 | None:intergenic | 30.0% | |
| ! | ATTGATTCATGGGAAGAAAA+AGG | + | chr8_4:16607053-16607072 | Msa1316340:five_prime_UTR | 30.0% |
| ! | GTTGTAGATTTTCTTAGTTC+TGG | + | chr8_4:16607117-16607136 | Msa1316340:CDS | 30.0% |
| ! | TAAGGAACTTAGCTCTTATT+TGG | + | chr8_4:16607230-16607249 | Msa1316340:CDS | 30.0% |
| GATTCATAATATCAATGGCA+CGG | - | chr8_4:16607320-16607339 | None:intergenic | 30.0% | |
| TTCGCGATTCATAATATCAA+TGG | - | chr8_4:16607325-16607344 | None:intergenic | 30.0% | |
| ATTGTAGGTCGATTGTAAAT+CGG | + | chr8_4:16607409-16607428 | Msa1316340:CDS | 30.0% | |
| !! | ATTTTAGAGAAAATCGAGTC+AGG | + | chr8_4:16607582-16607601 | Msa1316340:CDS | 30.0% |
| !! | TTTTAGAGAAAATCGAGTCA+GGG | + | chr8_4:16607583-16607602 | Msa1316340:CDS | 30.0% |
| TATTTCAGTTTCCTTTCGTT+CGG | - | chr8_4:16607825-16607844 | None:intergenic | 30.0% | |
| AACTGAAATACTTTGCGAAA+CGG | + | chr8_4:16607835-16607854 | Msa1316340:CDS | 30.0% | |
| TGAAACAATCCATAGAAGAA+TGG | + | chr8_4:16608063-16608082 | Msa1316340:CDS | 30.0% | |
| TCTATCTTTCCATTCTTCTA+TGG | - | chr8_4:16608075-16608094 | None:intergenic | 30.0% | |
| AAGTTGTCTAAAAACTCTTG+AGG | + | chr8_4:16608163-16608182 | Msa1316340:CDS | 30.0% | |
| ! | TATCTTTTGCTAGAATGCAA+AGG | - | chr8_4:16608307-16608326 | None:intergenic | 30.0% |
| ! | AACTAAACTTTCTTTTCTGC+AGG | + | chr8_4:16608398-16608417 | Msa1316340:intron | 30.0% |
| TGATCAGAATGTTATACTGA+TGG | + | chr8_4:16608656-16608675 | Msa1316340:CDS | 30.0% | |
| ACATACATTAGTTGAGTCAT+CGG | + | chr8_4:16608744-16608763 | Msa1316340:intron | 30.0% | |
| AAGAGAAAAAGAACTAGCAA+TGG | - | chr8_4:16608780-16608799 | None:intergenic | 30.0% | |
| ACAATGTGGTTAATTGTGTT+CGG | - | chr8_4:16608986-16609005 | None:intergenic | 30.0% | |
| ! | AATAAGGAGTCCTTATTTGA+TGG | + | chr8_4:16609099-16609118 | Msa1316340:intron | 30.0% |
| GTTCTTACATAATGATCTTC+AGG | + | chr8_4:16609149-16609168 | Msa1316340:intron | 30.0% | |
| CTATCCAGTTTAAAGAGAAA+TGG | + | chr8_4:16609204-16609223 | Msa1316340:CDS | 30.0% | |
| AAGTCCATTTCTCTTTAAAC+TGG | - | chr8_4:16609211-16609230 | None:intergenic | 30.0% | |
| CATACACACATCAAGTTTAT+GGG | + | chr8_4:16609287-16609306 | Msa1316340:CDS | 30.0% | |
| TCAGAATCTAGTAACAAAAC+CGG | - | chr8_4:16609375-16609394 | None:intergenic | 30.0% | |
| !! | ATAATGTTTTGTTGTACACC+AGG | - | chr8_4:16609441-16609460 | None:intergenic | 30.0% |
| ATCATCGAAATTGCAAACAT+CGG | + | chr8_4:16609580-16609599 | Msa1316340:intron | 30.0% | |
| TTGCAAACATCGGTATAAAT+AGG | + | chr8_4:16609590-16609609 | Msa1316340:intron | 30.0% | |
| ! | GTTGCCAATTTTCAAAATTG+AGG | - | chr8_4:16609617-16609636 | None:intergenic | 30.0% |
| AGGGATAACCTAAATTTCAT+AGG | - | chr8_4:16609785-16609804 | None:intergenic | 30.0% | |
| ! | TATGAAATTTAGGTTATCCC+TGG | + | chr8_4:16609784-16609803 | Msa1316340:intron | 30.0% |
| ! | ATGAAATTTAGGTTATCCCT+GGG | + | chr8_4:16609785-16609804 | Msa1316340:intron | 30.0% |
| AACATGAAAATACAAGTGCA+TGG | - | chr8_4:16609999-16610018 | None:intergenic | 30.0% | |
| ATCAACATTCTCTACTATGA+TGG | - | chr8_4:16610180-16610199 | None:intergenic | 30.0% | |
| TGAGTTATCTGATCAATTTC+TGG | - | chr8_4:16610293-16610312 | None:intergenic | 30.0% | |
| CAAAAAATTGTAGCTGAAAC+TGG | + | chr8_4:16610455-16610474 | Msa1316340:CDS | 30.0% | |
| AAACAAATATTCAAGTGTGG+GGG | - | chr8_4:16611256-16611275 | None:intergenic | 30.0% | |
| CAAACAAATATTCAAGTGTG+GGG | - | chr8_4:16611257-16611276 | None:intergenic | 30.0% | |
| GACAAACAAATATTCAAGTG+TGG | - | chr8_4:16611259-16611278 | None:intergenic | 30.0% | |
| TAACCTGTTCCTCATAATAT+CGG | - | chr8_4:16611470-16611489 | None:intergenic | 30.0% | |
| TTAACAATTTAAGCACTTGG+GGG | + | chr8_4:16611569-16611588 | Msa1316340:intron | 30.0% | |
| AAAAATTGCAGCACTACTTA+GGG | - | chr8_4:16611674-16611693 | None:intergenic | 30.0% | |
| AAAAAATTGCAGCACTACTT+AGG | - | chr8_4:16611675-16611694 | None:intergenic | 30.0% | |
| !!! | ATTTTTTATCATCTCTGCGT+AGG | + | chr8_4:16611688-16611707 | Msa1316340:intron | 30.0% |
| AATAATTCATCAAAGCATGG+AGG | - | chr8_4:16611737-16611756 | None:intergenic | 30.0% | |
| GGAAATAATTCATCAAAGCA+TGG | - | chr8_4:16611740-16611759 | None:intergenic | 30.0% | |
| !! | AGTTCTAAATCCCTAAAAAG+AGG | - | chr8_4:16611761-16611780 | None:intergenic | 30.0% |
| TATGTTAAACTAAAATGGGG+CGG | - | chr8_4:16611865-16611884 | None:intergenic | 30.0% | |
| ! | GTGTATGAGTAGGTATTTTA+AGG | - | chr8_4:16611986-16612005 | None:intergenic | 30.0% |
| GAAGAGTTCAATTTGGAAAG+TGG | - | chr8_4:16606433-16606452 | None:intergenic | 35.0% | |
| CAAAAGGGTTCTCAAATTCA+TGG | + | chr8_4:16606553-16606572 | Msa1316340:five_prime_UTR | 35.0% | |
| TCTCTCTTTAAGTCTTTCTC+AGG | + | chr8_4:16606582-16606601 | Msa1316340:five_prime_UTR | 35.0% | |
| AGAAGAAAATAGGTGCAAGT+TGG | - | chr8_4:16606668-16606687 | None:intergenic | 35.0% | |
| ATTCATTGAACAGAAGGGTT+TGG | + | chr8_4:16606985-16607004 | Msa1316340:five_prime_UTR | 35.0% | |
| ! | TATGCAAATTGCAACCCTTT+TGG | + | chr8_4:16607013-16607032 | Msa1316340:five_prime_UTR | 35.0% |
| CACTAACAAATGTTGCCAAA+AGG | - | chr8_4:16607031-16607050 | None:intergenic | 35.0% | |
| ATTGCTGCATTGTAAGATGA+TGG | + | chr8_4:16607095-16607114 | Msa1316340:exon | 35.0% | |
| GATTTGAGAAATTGCAGTTG+AGG | - | chr8_4:16607148-16607167 | None:intergenic | 35.0% | |
| TGTGATAATATGGAGAAAGC+TGG | + | chr8_4:16607531-16607550 | Msa1316340:CDS | 35.0% | |
| TATGGAGAAAGCTGGATTTA+AGG | + | chr8_4:16607539-16607558 | Msa1316340:CDS | 35.0% | |
| ! | TGCTCGTGTTGATAAGAAAA+AGG | + | chr8_4:16607737-16607756 | Msa1316340:CDS | 35.0% |
| GGATCAAATCATTGCTTTGT+TGG | + | chr8_4:16607776-16607795 | Msa1316340:CDS | 35.0% | |
| ATCTTTAGGTACTCGAATCT+TGG | + | chr8_4:16607860-16607879 | Msa1316340:CDS | 35.0% | |
| GGACAATAAAATGACTGTAG+AGG | - | chr8_4:16607888-16607907 | None:intergenic | 35.0% | |
| TCCTATCACACATGATGTTA+TGG | + | chr8_4:16607905-16607924 | Msa1316340:CDS | 35.0% | |
| ACCATAACATCATGTGTGAT+AGG | - | chr8_4:16607909-16607928 | None:intergenic | 35.0% | |
| TATCACACATGATGTTATGG+TGG | + | chr8_4:16607908-16607927 | Msa1316340:CDS | 35.0% | |
| TGATCTGATGAAGTTTCAAC+AGG | - | chr8_4:16607936-16607955 | None:intergenic | 35.0% | |
| ATAGAGAAGTGGTTTGAAGA+AGG | + | chr8_4:16607975-16607994 | Msa1316340:CDS | 35.0% | |
| ! | GCTGATTCCTTTAGATACAT+CGG | + | chr8_4:16608019-16608038 | Msa1316340:CDS | 35.0% |
| CTCAAAACCGATGTATCTAA+AGG | - | chr8_4:16608029-16608048 | None:intergenic | 35.0% | |
| GAACACATTGGAAAAGTTCA+AGG | + | chr8_4:16608543-16608562 | Msa1316340:CDS | 35.0% | |
| TCAAGGTTGCATACTTCTAT+TGG | + | chr8_4:16608560-16608579 | Msa1316340:CDS | 35.0% | |
| ! | CTATTGGTGACTATGTCTAA+TGG | + | chr8_4:16608576-16608595 | Msa1316340:CDS | 35.0% |
| TAGAGATGCAACTGATGTAT+TGG | + | chr8_4:16608617-16608636 | Msa1316340:CDS | 35.0% | |
| GAATGTTATACTGATGGCAA+AGG | + | chr8_4:16608662-16608681 | Msa1316340:CDS | 35.0% | |
| ATTAGTTGAGTCATCGGTAT+TGG | + | chr8_4:16608750-16608769 | Msa1316340:intron | 35.0% | |
| GTTAACACGGTTCAAATATG+TGG | + | chr8_4:16608899-16608918 | Msa1316340:intron | 35.0% | |
| TTCCATTTCGGCTAATGTAT+TGG | - | chr8_4:16609067-16609086 | None:intergenic | 35.0% | |
| GTGGTCAGTTAATTCCATTT+CGG | - | chr8_4:16609079-16609098 | None:intergenic | 35.0% | |
| GGAATTAACTGACCACAATA+AGG | + | chr8_4:16609083-16609102 | Msa1316340:intron | 35.0% | |
| CAAATAAGGACTCCTTATTG+TGG | - | chr8_4:16609098-16609117 | None:intergenic | 35.0% | |
| AAGTACACCACCATCAAATA+AGG | - | chr8_4:16609112-16609131 | None:intergenic | 35.0% | |
| TGTAAGAACAAGTGAAGAAG+AGG | - | chr8_4:16609138-16609157 | None:intergenic | 35.0% | |
| TAGATTCTTAAGAGCCTTTG+TGG | - | chr8_4:16609187-16609206 | None:intergenic | 35.0% | |
| GACTTGAAATGATTCGACAA+GGG | + | chr8_4:16609226-16609245 | Msa1316340:CDS | 35.0% | |
| ACTTGAAATGATTCGACAAG+GGG | + | chr8_4:16609227-16609246 | Msa1316340:CDS | 35.0% | |
| TGTGTATGCTATGATGGTAA+AGG | - | chr8_4:16609275-16609294 | None:intergenic | 35.0% | |
| TTGATGTGTGTATGCTATGA+TGG | - | chr8_4:16609281-16609300 | None:intergenic | 35.0% | |
| GCATACACACATCAAGTTTA+TGG | + | chr8_4:16609286-16609305 | Msa1316340:CDS | 35.0% | |
| TGCAGCAAGTTGCATAATTA+TGG | - | chr8_4:16609325-16609344 | None:intergenic | 35.0% | |
| ! | TCACACTGATTAAAGGGAAA+AGG | - | chr8_4:16609413-16609432 | None:intergenic | 35.0% |
| ! | GTTGTGTCACACTGATTAAA+GGG | - | chr8_4:16609419-16609438 | None:intergenic | 35.0% |
| GTCTTGATATTTGAAGACGA+AGG | - | chr8_4:16609492-16609511 | None:intergenic | 35.0% | |
| TATCAAGACGAAGCTAAATG+AGG | + | chr8_4:16609503-16609522 | Msa1316340:intron | 35.0% | |
| !! | AGGCCCTCAATTTTGAAAAT+TGG | + | chr8_4:16609610-16609629 | Msa1316340:intron | 35.0% |
| TAACGACAGAAGTTAACAGA+TGG | - | chr8_4:16609677-16609696 | None:intergenic | 35.0% | |
| ! | TGAAATTTAGGTTATCCCTG+GGG | + | chr8_4:16609786-16609805 | Msa1316340:intron | 35.0% |
| ! | GAGCACTGTTCATACATAAA+TGG | - | chr8_4:16610056-16610075 | None:intergenic | 35.0% |
| ACTTTATAGCACTTGCTCTT+AGG | - | chr8_4:16610124-16610143 | None:intergenic | 35.0% | |
| TATTTCCTCTTCATCAGATG+AGG | - | chr8_4:16610240-16610259 | None:intergenic | 35.0% | |
| AGAGGAAATACATTCTGCTA+TGG | + | chr8_4:16610250-16610269 | Msa1316340:CDS | 35.0% | |
| GAGGAAATACATTCTGCTAT+GGG | + | chr8_4:16610251-16610270 | Msa1316340:CDS | 35.0% | |
| ! | TCTGATCAATTTCTGGAAGA+TGG | - | chr8_4:16610286-16610305 | None:intergenic | 35.0% |
| ! | AGTTACTCCTTTGAAGATCT+CGG | - | chr8_4:16610376-16610395 | None:intergenic | 35.0% |
| ! | TTTTACAGTTCCAACACACT+TGG | + | chr8_4:16610427-16610446 | Msa1316340:CDS | 35.0% |
| !! | CGCTGAATTTTCTAAAAGCT+CGG | + | chr8_4:16610550-16610569 | Msa1316340:CDS | 35.0% |
| !!! | AGTCCTTTTTGCTTTGGAAT+CGG | - | chr8_4:16610590-16610609 | None:intergenic | 35.0% |
| GAAATTGGCTGTAAAGTTCA+TGG | + | chr8_4:16610635-16610654 | Msa1316340:intron | 35.0% | |
| AATGTTCCACAAGCAACAAA+GGG | + | chr8_4:16610874-16610893 | Msa1316340:intron | 35.0% | |
| GGATTTAAGCTACTCTATTC+TGG | - | chr8_4:16610914-16610933 | None:intergenic | 35.0% | |
| TGAGTCTTTGAGCAAAAGAA+AGG | - | chr8_4:16611080-16611099 | None:intergenic | 35.0% | |
| TTTGTTTGTCCTCAAGCAAA+AGG | + | chr8_4:16611269-16611288 | Msa1316340:intron | 35.0% | |
| GAAAACTCATGTCTCTCTTA+AGG | + | chr8_4:16611338-16611357 | Msa1316340:intron | 35.0% | |
| TAACCGATATTATGAGGAAC+AGG | + | chr8_4:16611464-16611483 | Msa1316340:intron | 35.0% | |
| TCTCTCTGAATTCCTAAATG+TGG | - | chr8_4:16611807-16611826 | None:intergenic | 35.0% | |
| ACATTTAGGAATTCAGAGAG+AGG | + | chr8_4:16611806-16611825 | Msa1316340:intron | 35.0% | |
| CATTTAGGAATTCAGAGAGA+GGG | + | chr8_4:16611807-16611826 | Msa1316340:intron | 35.0% | |
| ATGTTAAACTAAAATGGGGC+GGG | - | chr8_4:16611864-16611883 | None:intergenic | 35.0% | |
| GGAACACGTTCTAACTTTAA+TGG | - | chr8_4:16611965-16611984 | None:intergenic | 35.0% | |
| CTTTGAGTAAGTGTATGAGT+AGG | - | chr8_4:16611996-16612015 | None:intergenic | 35.0% | |
| ACGACTCAAGACACTTTATT+AGG | + | chr8_4:16612247-16612266 | Msa1316340:intron | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | + | chr8_4:16612310-16612329 | Msa1316340:intron | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | + | chr8_4:16612310-16612329 | Msa1316340:intron | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+AGG | + | chr8_4:16612310-16612329 | Msa1316340:intron | 35.0% | |
| TGAGAAATTGCAGTTGAGGT+AGG | - | chr8_4:16607144-16607163 | None:intergenic | 40.0% | |
| GTACATCATTAGCACTGCAT+AGG | - | chr8_4:16607191-16607210 | None:intergenic | 40.0% | |
| !!! | CGCCGATTTTGAAAGAATTG+AGG | + | chr8_4:16607262-16607281 | Msa1316340:CDS | 40.0% |
| TGAAAAAGTGAGTGATTCCG+AGG | + | chr8_4:16607287-16607306 | Msa1316340:CDS | 40.0% | |
| TCGGTTAGAAAATCACACGA+AGG | + | chr8_4:16607428-16607447 | Msa1316340:CDS | 40.0% | |
| AGAAAATCGAGTCAGGGATA+AGG | + | chr8_4:16607589-16607608 | Msa1316340:CDS | 40.0% | |
| GAAAATCGAGTCAGGGATAA+GGG | + | chr8_4:16607590-16607609 | Msa1316340:CDS | 40.0% | |
| AATCTCATTGCTAACGCTGT+TGG | + | chr8_4:16607651-16607670 | Msa1316340:CDS | 40.0% | |
| AAATGAGAAGTCGACGATGA+AGG | + | chr8_4:16607680-16607699 | Msa1316340:CDS | 40.0% | |
| AAAGGCTGAAGCTATGCAAA+TGG | + | chr8_4:16607755-16607774 | Msa1316340:CDS | 40.0% | |
| TTTGCGAAACGGCAATCTTT+AGG | + | chr8_4:16607846-16607865 | Msa1316340:CDS | 40.0% | |
| ! | AGAGAAGTGCAATAGAGAAG+TGG | + | chr8_4:16607964-16607983 | Msa1316340:CDS | 40.0% |
| TCTAAAGGAATCAGCGTCAA+AGG | - | chr8_4:16608014-16608033 | None:intergenic | 40.0% | |
| TTCTCGCGCCAAATCATATT+TGG | - | chr8_4:16608526-16608545 | None:intergenic | 40.0% | |
| ! | AAGGAGTCCTTATTTGATGG+TGG | + | chr8_4:16609102-16609121 | Msa1316340:intron | 40.0% |
| TGATCTTCAGGTGAAAACAG+TGG | + | chr8_4:16609161-16609180 | Msa1316340:intron | 40.0% | |
| GGACTTGAAATGATTCGACA+AGG | + | chr8_4:16609225-16609244 | Msa1316340:CDS | 40.0% | |
| TGGTAAAGGAGATCAAGCAA+CGG | - | chr8_4:16609261-16609280 | None:intergenic | 40.0% | |
| CTAGTAACAAAACCGGTGTT+TGG | - | chr8_4:16609368-16609387 | None:intergenic | 40.0% | |
| ! | GGTTGTGTCACACTGATTAA+AGG | - | chr8_4:16609420-16609439 | None:intergenic | 40.0% |
| TTAATCAGTGTGACACAACC+TGG | + | chr8_4:16609420-16609439 | Msa1316340:CDS | 40.0% | |
| CTGTTAACTTCTGTCGTTAG+AGG | + | chr8_4:16609678-16609697 | Msa1316340:intron | 40.0% | |
| CTATGATGTGGCACGTTAAT+TGG | + | chr8_4:16609701-16609720 | Msa1316340:intron | 40.0% | |
| CAGCTATACCAGAATTGGTT+AGG | + | chr8_4:16610075-16610094 | Msa1316340:CDS | 40.0% | |
| TCACACAACCTAACCAATTC+TGG | - | chr8_4:16610086-16610105 | None:intergenic | 40.0% | |
| CTTCATCAGATGAGGATTGT+AGG | - | chr8_4:16610232-16610251 | None:intergenic | 40.0% | |
| ACAATCCTCATCTGATGAAG+AGG | + | chr8_4:16610232-16610251 | Msa1316340:CDS | 40.0% | |
| ! | ACTCAATGGATTCTAGATGC+TGG | + | chr8_4:16610308-16610327 | Msa1316340:CDS | 40.0% |
| AACTTAGTCGAGAAAGCAGT+CGG | + | chr8_4:16610392-16610411 | Msa1316340:CDS | 40.0% | |
| TTAGTGCAGTTGCTTGAAAG+TGG | + | chr8_4:16610491-16610510 | Msa1316340:CDS | 40.0% | |
| ! | AGACCGATTCCAAAGCAAAA+AGG | + | chr8_4:16610584-16610603 | Msa1316340:CDS | 40.0% |
| ! | CACAGTAGTCCTTTTTGCTT+TGG | - | chr8_4:16610596-16610615 | None:intergenic | 40.0% |
| ACTTTACAGCCAATTTCGCT+TGG | - | chr8_4:16610632-16610651 | None:intergenic | 40.0% | |
| ATTGGCTGTAAAGTTCATGG+AGG | + | chr8_4:16610638-16610657 | Msa1316340:intron | 40.0% | |
| CTCTTAGTTGCTGAAGCAAT+TGG | + | chr8_4:16610689-16610708 | Msa1316340:intron | 40.0% | |
| GAATGTTCCACAAGCAACAA+AGG | + | chr8_4:16610873-16610892 | Msa1316340:intron | 40.0% | |
| ! | AAAAAGCCCTTTGTTGCTTG+TGG | - | chr8_4:16610883-16610902 | None:intergenic | 40.0% |
| ! | ACAAGCAACAAAGGGCTTTT+TGG | + | chr8_4:16610882-16610901 | Msa1316340:intron | 40.0% |
| TCCTAAGCAAAAGCAGCAAA+AGG | + | chr8_4:16610931-16610950 | Msa1316340:intron | 40.0% | |
| ACAAAAATATGTCTCCCCGA+AGG | - | chr8_4:16611016-16611035 | None:intergenic | 40.0% | |
| TTGAGCAAAAGAAAGGAGTC+TGG | - | chr8_4:16611073-16611092 | None:intergenic | 40.0% | |
| ! | ATGTCATTGCCTTTTGCTTG+AGG | - | chr8_4:16611281-16611300 | None:intergenic | 40.0% |
| ACTCACTTGAGACTTGATGT+CGG | - | chr8_4:16611421-16611440 | None:intergenic | 40.0% | |
| ACGGACTTCCTATGAGAAAA+TGG | - | chr8_4:16611616-16611635 | None:intergenic | 40.0% | |
| ATCATGGAATCTAGGAGGAA+AGG | - | chr8_4:16611649-16611668 | None:intergenic | 40.0% | |
| TTAGGGTGATCATGGAATCT+AGG | - | chr8_4:16611657-16611676 | None:intergenic | 40.0% | |
| TTCATCAAAGCATGGAGGAA+AGG | - | chr8_4:16611732-16611751 | None:intergenic | 40.0% | |
| CTCTGAATTCCTAAATGTGG+TGG | - | chr8_4:16611804-16611823 | None:intergenic | 40.0% | |
| ! | CAACTGAGTGCTTTTCTCAT+TGG | + | chr8_4:16612020-16612039 | Msa1316340:intron | 40.0% |
| ACAATGCTTCTCCTAAGTGT+GGG | - | chr8_4:16612278-16612297 | None:intergenic | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612325-16612344 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAAGAAGAAGAGG+AGG | + | chr8_4:16612316-16612335 | Msa1316340:intron | 40.0% | |
| AGAGGAAGAAGAAGAAGAAG+AGG | + | chr8_4:16612355-16612374 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAAGAAGAGGAAG+AGG | + | chr8_4:16612319-16612338 | Msa1316340:intron | 40.0% | |
| AGAAGAAGAAGAGGAAGAAG+AGG | + | chr8_4:16612322-16612341 | Msa1316340:intron | 40.0% | |
| TACGACATTCCAGAGCAAGT+AGG | - | chr8_4:16607362-16607381 | None:intergenic | 45.0% | |
| GGAATGTCGTAAGAAGAGCA+AGG | + | chr8_4:16607371-16607390 | Msa1316340:CDS | 45.0% | |
| TCACACGAAGGAGATAAGCA+AGG | + | chr8_4:16607440-16607459 | Msa1316340:CDS | 45.0% | |
| AGGTCTTTCAGCCGGAATAT+TGG | + | chr8_4:16607491-16607510 | Msa1316340:CDS | 45.0% | |
| GGTCTTTCAGCCGGAATATT+GGG | + | chr8_4:16607492-16607511 | Msa1316340:CDS | 45.0% | |
| ! | GAAAGCTGGATTTAAGGCTG+CGG | + | chr8_4:16607545-16607564 | Msa1316340:CDS | 45.0% |
| ! | TTTCCTTTCGTTCGGTGATG+AGG | - | chr8_4:16607817-16607836 | None:intergenic | 45.0% |
| CAGGGAATGGATGATACTTG+AGG | + | chr8_4:16608211-16608230 | Msa1316340:CDS | 45.0% | |
| GTTCGAGAAACCGTGACATA+AGG | + | chr8_4:16608264-16608283 | Msa1316340:CDS | 45.0% | |
| GAGCTCGATTCCTTATGTCA+CGG | - | chr8_4:16608277-16608296 | None:intergenic | 45.0% | |
| GAATCGATCGTCCATTCTCT+TGG | + | chr8_4:16608450-16608469 | Msa1316340:CDS | 45.0% | |
| GGCCAATACATTAGCCGAAA+TGG | + | chr8_4:16609062-16609081 | Msa1316340:intron | 45.0% | |
| CTCTCAAGATGTCCAAACAC+CGG | + | chr8_4:16609353-16609372 | Msa1316340:CDS | 45.0% | |
| TGACTGACACAAGGCGTAAA+AGG | - | chr8_4:16609469-16609488 | None:intergenic | 45.0% | |
| TGTCGTTAGAGGCTATGATG+TGG | + | chr8_4:16609689-16609708 | Msa1316340:intron | 45.0% | |
| GTGCTCAGCTATACCAGAAT+TGG | + | chr8_4:16610070-16610089 | Msa1316340:intron | 45.0% | |
| GTAGAGACCGAGATCTTCAA+AGG | + | chr8_4:16610366-16610385 | Msa1316340:CDS | 45.0% | |
| ! | TTTTGCCACTCCAAGTGTGT+TGG | - | chr8_4:16610440-16610459 | None:intergenic | 45.0% |
| TTCTCAGCTCCAAGCGAAAT+TGG | + | chr8_4:16610620-16610639 | Msa1316340:CDS | 45.0% | |
| AAGCAATTGGACCACTCACA+AGG | + | chr8_4:16610702-16610721 | Msa1316340:intron | 45.0% | |
| TCTCCAAGATTCCTTGTGAG+TGG | - | chr8_4:16610716-16610735 | None:intergenic | 45.0% | |
| !!! | GCCTTTTGCTGCTTTTGCTT+AGG | - | chr8_4:16610935-16610954 | None:intergenic | 45.0% |
| ! | AAAGGAGTCTGGAGCTGATT+CGG | - | chr8_4:16611062-16611081 | None:intergenic | 45.0% |
| !! | TCGGGTTGAATAGGTTCACA+AGG | - | chr8_4:16611402-16611421 | None:intergenic | 45.0% |
| !! | GACTTGATGTCGGGTTGAAT+AGG | - | chr8_4:16611411-16611430 | None:intergenic | 45.0% |
| CTCACTTGAGACTTGATGTC+GGG | - | chr8_4:16611420-16611439 | None:intergenic | 45.0% | |
| ! | AGGGGCTACCATTTTCTCAT+AGG | + | chr8_4:16611605-16611624 | Msa1316340:intron | 45.0% |
| TTTCTCATAGGAAGTCCGTG+AGG | + | chr8_4:16611617-16611636 | Msa1316340:intron | 45.0% | |
| TTCTCATAGGAAGTCCGTGA+GGG | + | chr8_4:16611618-16611637 | Msa1316340:intron | 45.0% | |
| AGCACTACTTAGGGTGATCA+TGG | - | chr8_4:16611665-16611684 | None:intergenic | 45.0% | |
| GTGTCATGTCCTCCATATGT+TGG | + | chr8_4:16611829-16611848 | Msa1316340:intron | 45.0% | |
| AGAATGGCACCAACATATGG+AGG | - | chr8_4:16611841-16611860 | None:intergenic | 45.0% | |
| AATGCTTCTCCTAAGTGTGG+GGG | - | chr8_4:16612276-16612295 | None:intergenic | 45.0% | |
| CAATGCTTCTCCTAAGTGTG+GGG | - | chr8_4:16612277-16612296 | None:intergenic | 45.0% | |
| GACAATGCTTCTCCTAAGTG+TGG | - | chr8_4:16612279-16612298 | None:intergenic | 45.0% | |
| AGAAGAAGAAGAGGAGGAAG+AGG | + | chr8_4:16612454-16612473 | Msa1316340:intron | 45.0% | |
| AGAGGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612496-16612515 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAGGAAGAAGAAGAGGAAG+AGG | + | chr8_4:16612331-16612350 | Msa1316340:intron | 45.0% | |
| AGAAGAAGAGGAAGAGGAAG+AGG | + | chr8_4:16612508-16612527 | Msa1316340:three_prime_UTR | 45.0% | |
| GGAAGACGAAGAAGAAGAAG+AGG | + | chr8_4:16612553-16612572 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAGGAAGAAGAGGAAGAAG+AGG | + | chr8_4:16612571-16612590 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAAGAGGAAGAAGAGGAAG+AGG | + | chr8_4:16612568-16612587 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAAGAGGAAGAGGAAGAAG+AGG | + | chr8_4:16612511-16612530 | Msa1316340:three_prime_UTR | 45.0% | |
| GGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612598-16612617 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAGGAAGAAGAAGACGAAG+AGG | + | chr8_4:16612616-16612635 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAAGACGAAGAGGAAGAAG+AGG | + | chr8_4:16612625-16612644 | Msa1316340:three_prime_UTR | 45.0% | |
| GGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612598-16612617 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAGGAAGAAGAAGACGAAG+AGG | + | chr8_4:16612616-16612635 | Msa1316340:three_prime_UTR | 45.0% | |
| AGACGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612685-16612704 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAAGAAGAGGAGGAAGAAG+AGG | + | chr8_4:16612697-16612716 | Msa1316340:three_prime_UTR | 45.0% | |
| GGAAGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612598-16612617 | Msa1316340:three_prime_UTR | 45.0% | |
| AGAGGAAGAAGAAGACGAAG+AGG | + | chr8_4:16612616-16612635 | Msa1316340:three_prime_UTR | 45.0% | |
| AGACGAAGAGGAAGAAGAAG+AGG | + | chr8_4:16612685-16612704 | Msa1316340:three_prime_UTR | 45.0% | |
| AATGGCACGGTTGAATGCCT+CGG | - | chr8_4:16607307-16607326 | None:intergenic | 50.0% | |
| AGCTGCAAACCTACTTGCTC+TGG | + | chr8_4:16607350-16607369 | Msa1316340:CDS | 50.0% | |
| ! | AAGGAGATAAGCAAGGCGCT+TGG | + | chr8_4:16607447-16607466 | Msa1316340:CDS | 50.0% |
| CTTCTTCCTTTAGCCGCATC+AGG | + | chr8_4:16607471-16607490 | Msa1316340:CDS | 50.0% | |
| GAAAGACCTGATGCGGCTAA+AGG | - | chr8_4:16607480-16607499 | None:intergenic | 50.0% | |
| ! | TGGATTTAAGGCTGCGGTAG+CGG | + | chr8_4:16607551-16607570 | Msa1316340:CDS | 50.0% |
| TGAGCAGAGAGAGCAACACA+GGG | + | chr8_4:16608193-16608212 | Msa1316340:CDS | 50.0% | |
| AGAGAGAGCAACACAGGGAA+TGG | + | chr8_4:16608198-16608217 | Msa1316340:CDS | 50.0% | |
| GATTTGGCGCGAGAACACAT+TGG | + | chr8_4:16608531-16608550 | Msa1316340:CDS | 50.0% | |
| TTACTGCAACGTCTCTCGAC+AGG | + | chr8_4:16608702-16608721 | Msa1316340:CDS | 50.0% | |
| GGTGAAAACAGTGGCCACAA+AGG | + | chr8_4:16609170-16609189 | Msa1316340:intron | 50.0% | |
| AGACGAAGGTGACTGACACA+AGG | - | chr8_4:16609478-16609497 | None:intergenic | 50.0% | |
| TTCCTTCCAAACTTGCCCCA+GGG | - | chr8_4:16609804-16609823 | None:intergenic | 50.0% | |
| ATTCCTTCCAAACTTGCCCC+AGG | - | chr8_4:16609805-16609824 | None:intergenic | 50.0% | |
| CAGTTCCAACACACTTGGAG+TGG | + | chr8_4:16610432-16610451 | Msa1316340:CDS | 50.0% | |
| !! | CGCTGCACGTTGTTTTGTCA+AGG | - | chr8_4:16610522-16610541 | None:intergenic | 50.0% |
| GGACCACTCACAAGGAATCT+TGG | + | chr8_4:16610710-16610729 | Msa1316340:intron | 50.0% | |
| AAAGCAGCAAAAGGCCATCC+TGG | + | chr8_4:16610940-16610959 | Msa1316340:intron | 50.0% | |
| TCTCATAGGAAGTCCGTGAG+GGG | + | chr8_4:16611619-16611638 | Msa1316340:intron | 50.0% | |
| GGGTGATCATGGAATCTAGG+AGG | - | chr8_4:16611654-16611673 | None:intergenic | 50.0% | |
| TCTGCGTAGGAAGTCAGTGA+GGG | + | chr8_4:16611701-16611720 | Msa1316340:intron | 50.0% | |
| AGGGAGTCACCACCACATTT+AGG | + | chr8_4:16611792-16611811 | Msa1316340:intron | 50.0% | |
| GGGAGAATGGCACCAACATA+TGG | - | chr8_4:16611844-16611863 | None:intergenic | 50.0% | |
| ACTAAAATGGGGCGGGAGAA+TGG | - | chr8_4:16611857-16611876 | None:intergenic | 50.0% | |
| ATTAGGATCCCCCCACACTT+AGG | + | chr8_4:16612264-16612283 | Msa1316340:intron | 50.0% | |
| ATGCTTCTCCTAAGTGTGGG+GGG | - | chr8_4:16612275-16612294 | None:intergenic | 50.0% | |
| AGAAGAGGAGGAAGAGGAAG+AGG | + | chr8_4:16612460-16612479 | Msa1316340:intron | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | + | chr8_4:16612472-16612491 | Msa1316340:intron | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | + | chr8_4:16612472-16612491 | Msa1316340:intron | 50.0% | |
| AGAGGAAGAGGAAGAGGAAG+AGG | + | chr8_4:16612472-16612491 | Msa1316340:intron | 50.0% | |
| AGAGGAAGAAGAGGACGAAG+AGG | + | chr8_4:16612634-16612653 | Msa1316340:three_prime_UTR | 50.0% | |
| AGAGGACGAAGAGGAAGAAG+AGG | + | chr8_4:16612643-16612662 | Msa1316340:three_prime_UTR | 50.0% | |
| CGAAGAGGAAGAAGAAGAGG+AGG | + | chr8_4:16612688-16612707 | Msa1316340:three_prime_UTR | 50.0% | |
| TCCGGCTGAAAGACCTGATG+CGG | - | chr8_4:16607487-16607506 | None:intergenic | 55.0% | |
| CAGCCTCATCACCGAACGAA+AGG | + | chr8_4:16607811-16607830 | Msa1316340:CDS | 55.0% | |
| GTGAGCAGAGAGAGCAACAC+AGG | + | chr8_4:16608192-16608211 | Msa1316340:CDS | 55.0% | |
| CCTGACGTCGTCCAAGAGAA+TGG | - | chr8_4:16608464-16608483 | None:intergenic | 55.0% | |
| CCATTCTCTTGGACGACGTC+AGG | + | chr8_4:16608461-16608480 | Msa1316340:CDS | 55.0% | |
| TTCTCTTGGACGACGTCAGG+AGG | + | chr8_4:16608464-16608483 | Msa1316340:CDS | 55.0% | |
| GAGATCAAGCAACGGTCGCA+CGG | - | chr8_4:16609253-16609272 | None:intergenic | 55.0% | |
| GGTTATCCCTGGGGCAAGTT+TGG | + | chr8_4:16609795-16609814 | Msa1316340:intron | 55.0% | |
| ATCCCTGGGGCAAGTTTGGA+AGG | + | chr8_4:16609799-16609818 | Msa1316340:intron | 55.0% | |
| CAGCAAAAGGCCATCCTGGA+GGG | + | chr8_4:16610944-16610963 | Msa1316340:intron | 55.0% | |
| TTGGGGGCTGCAGATTGCTT+AGG | + | chr8_4:16611585-16611604 | Msa1316340:intron | 55.0% | |
| TGGGGGCTGCAGATTGCTTA+GGG | + | chr8_4:16611586-16611605 | Msa1316340:intron | 55.0% | |
| CTCATAGGAAGTCCGTGAGG+GGG | + | chr8_4:16611620-16611639 | Msa1316340:intron | 55.0% | |
| GAGGAAAGGATACCCCCTCA+CGG | - | chr8_4:16611635-16611654 | None:intergenic | 55.0% | |
| CTCTGCGTAGGAAGTCAGTG+AGG | + | chr8_4:16611700-16611719 | Msa1316340:intron | 55.0% | |
| CTGCGTAGGAAGTCAGTGAG+GGG | + | chr8_4:16611702-16611721 | Msa1316340:intron | 55.0% | |
| TGCGTAGGAAGTCAGTGAGG+GGG | + | chr8_4:16611703-16611722 | Msa1316340:intron | 55.0% | |
| GGAGGAAGAGGAAGAGGAAG+AGG | + | chr8_4:16612466-16612485 | Msa1316340:intron | 55.0% | |
| GCCGCATCAGGTCTTTCAGC+CGG | + | chr8_4:16607483-16607502 | Msa1316340:CDS | 60.0% | |
| TTGGACGACGTCAGGAGGAG+AGG | + | chr8_4:16608469-16608488 | Msa1316340:CDS | 60.0% | |
| GCAGCAAAAGGCCATCCTGG+AGG | + | chr8_4:16610943-16610962 | Msa1316340:intron | 60.0% | |
| CAAAAGGCCATCCTGGAGGG+TGG | + | chr8_4:16610947-16610966 | Msa1316340:intron | 60.0% | |
| GGCCGTGCCAATCCTTAGCA+CGG | + | chr8_4:16610973-16610992 | Msa1316340:intron | 60.0% | |
| GCCGTGCCAATCCTTAGCAC+GGG | + | chr8_4:16610974-16610993 | Msa1316340:intron | 60.0% | |
| ! | GCCCGTGCTAAGGATTGGCA+CGG | - | chr8_4:16610978-16610997 | None:intergenic | 60.0% |
| CCGAAGGCAGAAGCTTGGCA+CGG | - | chr8_4:16611000-16611019 | None:intergenic | 60.0% | |
| CCGTGCCAAGCTTCTGCCTT+CGG | + | chr8_4:16610997-16611016 | Msa1316340:intron | 60.0% | |
| CGTGCCAAGCTTCTGCCTTC+GGG | + | chr8_4:16610998-16611017 | Msa1316340:intron | 60.0% | |
| GTGCCAAGCTTCTGCCTTCG+GGG | + | chr8_4:16610999-16611018 | Msa1316340:intron | 60.0% | |
| TCTCCCCGAAGGCAGAAGCT+TGG | - | chr8_4:16611005-16611024 | None:intergenic | 60.0% | |
| GGGGGCTGCAGATTGCTTAG+GGG | + | chr8_4:16611587-16611606 | Msa1316340:intron | 60.0% | |
| GCACGGCCCGTGCTAAGGAT+TGG | - | chr8_4:16610983-16611002 | None:intergenic | 65.0% | |
| GGCCATCCTGGAGGGTGGCA+CGG | + | chr8_4:16610952-16610971 | Msa1316340:intron | 70.0% | |
| GCTTGGCACGGCCCGTGCTA+AGG | - | chr8_4:16610988-16611007 | None:intergenic | 70.0% | |
| GGCCGTGCCACCCTCCAGGA+TGG | - | chr8_4:16610957-16610976 | None:intergenic | 75.0% | |
| ! | GCACGGCCGTGCCACCCTCC+AGG | - | chr8_4:16610961-16610980 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 16606422 | 16612769 | 16606422 | ID=Msa1316340;Name=Msa1316340 |
| chr8_4 | mRNA | 16606422 | 16612769 | 16606422 | ID=Msa1316340-mRNA-1;Parent=Msa1316340;Name=Msa1316340-mRNA-1;_AED=0.10;_eAED=0.10;_QI=632|0.4|0.5|0.83|0.8|0.66|6|294|790 |
| chr8_4 | exon | 16606422 | 16606743 | 16606422 | ID=Msa1316340-mRNA-1:exon:6212;Parent=Msa1316340-mRNA-1 |
| chr8_4 | exon | 16606801 | 16608340 | 16606801 | ID=Msa1316340-mRNA-1:exon:6213;Parent=Msa1316340-mRNA-1 |
| chr8_4 | exon | 16608420 | 16608723 | 16608420 | ID=Msa1316340-mRNA-1:exon:6214;Parent=Msa1316340-mRNA-1 |
| chr8_4 | exon | 16609181 | 16609443 | 16609181 | ID=Msa1316340-mRNA-1:exon:6215;Parent=Msa1316340-mRNA-1 |
| chr8_4 | exon | 16610071 | 16610644 | 16610071 | ID=Msa1316340-mRNA-1:exon:6216;Parent=Msa1316340-mRNA-1 |
| chr8_4 | exon | 16612474 | 16612769 | 16612474 | ID=Msa1316340-mRNA-1:exon:6217;Parent=Msa1316340-mRNA-1 |
| chr8_4 | five_prime_UTR | 16606422 | 16606743 | 16606422 | ID=Msa1316340-mRNA-1:five_prime_utr;Parent=Msa1316340-mRNA-1 |
| chr8_4 | five_prime_UTR | 16606801 | 16607110 | 16606801 | ID=Msa1316340-mRNA-1:five_prime_utr;Parent=Msa1316340-mRNA-1 |
| chr8_4 | CDS | 16607111 | 16608340 | 16607111 | ID=Msa1316340-mRNA-1:cds;Parent=Msa1316340-mRNA-1 |
| chr8_4 | CDS | 16608420 | 16608723 | 16608420 | ID=Msa1316340-mRNA-1:cds;Parent=Msa1316340-mRNA-1 |
| chr8_4 | CDS | 16609181 | 16609443 | 16609181 | ID=Msa1316340-mRNA-1:cds;Parent=Msa1316340-mRNA-1 |
| chr8_4 | CDS | 16610071 | 16610644 | 16610071 | ID=Msa1316340-mRNA-1:cds;Parent=Msa1316340-mRNA-1 |
| chr8_4 | CDS | 16612474 | 16612475 | 16612474 | ID=Msa1316340-mRNA-1:cds;Parent=Msa1316340-mRNA-1 |
| chr8_4 | three_prime_UTR | 16612476 | 16612769 | 16612476 | ID=Msa1316340-mRNA-1:three_prime_utr;Parent=Msa1316340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
