AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1176270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176270 MtrunA17_Chr8g0346441 97.515 1006 25 0 1 1006 1 1006 0.0 2004
Msa1176270 MtrunA17_Chr7g0275961 70.547 1005 292 2 2 1006 1 1001 0.0 1427
Msa1176270 MtrunA17_Chr1g0188041 28.332 1013 676 20 11 996 8 997 5.89e-106 354
Msa1176270 MtrunA17_Chr3g0084371 34.488 664 419 6 345 1006 184 833 2.02e-103 342
Msa1176270 MtrunA17_Chr3g0144071 28.086 794 517 24 257 1006 27 810 9.65e-72 254
Msa1176270 MtrunA17_Chr7g0248251 25.052 483 318 13 81 555 98 544 3.57e-20 96.3
Msa1176270 MtrunA17_Chr7g0237931 25.895 363 220 9 261 601 239 574 3.52e-19 92.8
Msa1176270 MtrunA17_Chr4g0031431 24.374 599 390 19 37 590 27 607 1.14e-18 91.3
Msa1176270 MtrunA17_Chr7g0234671 26.471 340 213 12 263 595 82 391 8.49e-16 81.3
Msa1176270 MtrunA17_Chr4g0044411 24.523 367 225 9 261 612 275 604 9.01e-16 82.0
Msa1176270 MtrunA17_Chr2g0284461 23.142 471 303 10 89 510 112 572 1.90e-15 81.3
Msa1176270 MtrunA17_Chr3g0106931 25.223 337 205 13 19 338 6 312 5.50e-15 79.7
Msa1176270 MtrunA17_Chr8g0373031 23.229 353 217 9 23 329 1 345 8.81e-15 79.0
Msa1176270 MtrunA17_Chr4g0048811 29.500 200 110 7 261 440 7 195 1.02e-13 73.6
Msa1176270 MtrunA17_Chr4g0013091 22.902 441 271 16 88 478 145 566 1.38e-13 75.1
Msa1176270 MtrunA17_Chr5g0434171 24.569 232 143 6 263 467 39 265 1.43e-13 74.3
Msa1176270 MtrunA17_Chr1g0199321 27.946 297 175 8 263 550 251 517 1.58e-12 71.6
Msa1176270 MtrunA17_Chr4g0059201 23.203 487 323 16 93 541 150 623 1.96e-12 71.6
Msa1176270 MtrunA17_Chr3g0079051 32.335 167 89 5 174 328 653 807 2.26e-12 71.2
Msa1176270 MtrunA17_Chr3g0129811 24.699 332 180 10 263 566 87 376 3.64e-12 70.1
Msa1176270 MtrunA17_Chr2g0280671 24.022 358 243 9 260 596 16 365 4.31e-12 69.3
Msa1176270 MtrunA17_Chr5g0413681 23.904 251 172 7 93 331 109 352 6.16e-12 69.7
Msa1176270 MtrunA17_Chr3g0117851 27.111 225 147 5 263 487 279 486 6.24e-12 69.7
Msa1176270 MtrunA17_Chr8g0384041 43.077 65 37 0 263 327 14 78 7.99e-12 68.6
Msa1176270 MtrunA17_Chr1g0183781 23.765 324 219 10 10 325 4 307 1.31e-11 68.9
Msa1176270 MtrunA17_Chr3g0110121 39.726 73 44 0 262 334 39 111 2.85e-11 67.0
Msa1176270 MtrunA17_Chr8g0390311 28.467 137 94 3 194 329 333 466 3.00e-11 67.8
Msa1176270 MtrunA17_Chr1g0152291 32.857 140 84 3 263 402 49 178 3.27e-11 66.6
Msa1176270 MtrunA17_Chr7g0214471 46.269 67 35 1 261 326 597 663 3.59e-11 67.8
Msa1176270 MtrunA17_Chr4g0044631 39.474 76 39 1 257 325 5 80 4.53e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1176270 AT1G76390.1 28.662 785 517 25 261 1006 27 807 3.89e-62 227
Msa1176270 AT1G76390.2 28.662 785 517 25 261 1006 27 807 3.89e-62 227
Msa1176270 AT1G20780.1 27.949 780 521 22 261 1006 25 797 7.06e-58 214
Msa1176270 AT1G20780.2 27.949 780 521 22 261 1006 25 797 7.06e-58 214
Msa1176270 AT1G20780.3 27.949 780 521 22 261 1006 25 797 7.06e-58 214
Msa1176270 AT1G68940.1 24.719 890 597 27 170 1006 216 1085 3.08e-52 200
Msa1176270 AT1G68940.2 25.556 810 543 25 170 935 216 1009 1.21e-50 195
Msa1176270 AT1G68940.3 25.464 809 545 24 170 935 163 956 1.29e-50 194
Msa1176270 AT5G42340.1 25.862 522 303 18 16 492 54 536 1.05e-21 101
Msa1176270 AT1G29340.1 24.197 467 301 10 89 509 124 583 1.11e-18 92.0
Msa1176270 AT5G67340.1 22.906 585 372 15 50 591 48 596 1.65e-18 91.7
Msa1176270 AT5G67340.2 22.906 585 372 15 50 591 48 596 1.65e-18 91.7
Msa1176270 AT1G71020.2 26.099 364 225 11 261 612 97 428 5.47e-18 89.0
Msa1176270 AT1G71020.1 26.099 364 225 11 261 612 245 576 1.14e-17 88.6
Msa1176270 AT3G46510.1 22.587 518 337 13 13 486 6 503 1.19e-17 88.6
Msa1176270 AT1G60190.1 23.622 508 337 15 13 479 27 524 1.79e-17 88.2
Msa1176270 AT1G23030.1 26.361 349 231 7 263 590 245 588 8.53e-17 85.9
Msa1176270 AT1G24330.1 22.712 612 345 17 20 512 3 605 1.27e-16 85.5
Msa1176270 AT1G24330.2 22.712 612 345 17 20 512 3 605 1.27e-16 85.5
Msa1176270 AT2G28830.1 29.078 282 171 7 256 510 181 460 1.27e-15 82.0
Msa1176270 AT5G01830.1 23.195 457 294 16 88 505 109 547 5.20e-15 80.1
Msa1176270 AT1G67530.3 24.709 344 211 10 25 329 8 342 1.60e-14 78.2
Msa1176270 AT1G67530.2 24.709 344 211 10 25 329 8 342 3.78e-14 77.4
Msa1176270 AT1G67530.1 24.709 344 211 10 25 329 8 342 3.78e-14 77.4
Msa1176270 AT1G67530.4 24.709 344 211 10 25 329 8 342 3.78e-14 77.4
Msa1176270 AT3G54790.3 25.279 269 160 10 91 348 86 324 1.87e-13 75.1
Msa1176270 AT3G54790.1 25.279 269 160 10 91 348 86 324 1.87e-13 75.1
Msa1176270 AT3G54790.2 25.279 269 160 10 91 348 50 288 2.58e-13 74.7
Msa1176270 AT1G49780.1 42.105 76 37 1 257 325 5 80 7.05e-13 72.4
Msa1176270 AT3G07360.1 23.971 413 231 14 187 587 4 345 1.85e-12 71.2
Msa1176270 AT4G36550.1 45.070 71 39 0 261 331 221 291 2.11e-12 71.6
Msa1176270 AT1G10560.1 24.496 347 221 10 14 332 28 361 3.31e-12 71.2
Msa1176270 AT5G51270.2 36.937 111 52 3 223 329 708 804 1.85e-11 68.9
Msa1176270 AT5G51270.1 36.937 111 52 3 223 329 708 804 1.85e-11 68.9
Msa1176270 AT3G61390.4 42.647 68 39 0 258 325 277 344 3.41e-11 66.6
Msa1176270 AT2G23140.2 29.143 175 111 4 156 329 138 300 3.59e-11 67.8
Msa1176270 AT2G23140.2 27.604 192 138 1 401 591 524 715 6.76e-11 67.0
Msa1176270 AT2G23140.4 29.143 175 111 4 156 329 138 300 3.59e-11 67.8
Msa1176270 AT2G23140.4 27.604 192 138 1 401 591 524 715 6.76e-11 67.0
Msa1176270 AT2G23140.1 29.143 175 111 4 156 329 141 303 3.63e-11 67.8
Msa1176270 AT2G23140.1 27.604 192 138 1 401 591 527 718 6.54e-11 67.0
Msa1176270 AT3G61390.2 42.647 68 39 0 258 325 352 419 4.86e-11 66.6
Msa1176270 AT2G23140.3 25.751 233 163 3 401 627 335 563 8.56e-11 66.6
Msa1176270 AT2G23140.5 25.751 233 163 3 401 627 335 563 8.56e-11 66.6
Msa1176270 AT5G09800.1 41.538 65 38 0 263 327 15 79 9.17e-11 65.9

Find 197 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTTCCTCAGATTATTAT+TGG 0.152104 8_1:+8289732 Msa1176270:three_prime_UTR
CTTCATTCACTTCTTCAAAA+TGG 0.172179 8_1:+8285007 Msa1176270:five_prime_UTR
TTCTCGCGCCAAATCATATT+TGG 0.186259 8_1:-8287015 None:intergenic
TGAGTTATCTGATCAATTTC+TGG 0.187668 8_1:-8288791 None:intergenic
TAAGGAACTTAGTTCTTATT+TGG 0.189177 8_1:+8285722 Msa1176270:CDS
TATGGAGAAAGCTGGATTTA+AGG 0.218387 8_1:+8286031 Msa1176270:CDS
GCATACACACATCAAGTTTA+TGG 0.223246 8_1:+8287767 Msa1176270:CDS
TTCTCAGCTCCAAGTGAAAT+TGG 0.232487 8_1:+8289121 Msa1176270:CDS
TATCAGATTTAGACCTTGTT+TGG 0.255235 8_1:+8285365 Msa1176270:intron
CGCGGAGTCTCAAAACATTT+TGG 0.257727 8_1:-8289831 None:intergenic
ATTGATTCATGGGAAGAAAA+AGG 0.260650 8_1:+8285545 Msa1176270:five_prime_UTR
CAAGTTCTTATACAAATTCT+TGG 0.261077 8_1:+8286734 Msa1176270:CDS
TTTAATTTCTTCCAATATTC+CGG 0.265541 8_1:-8285994 None:intergenic
TGGAGTCTGTGAGGCTTCTT+TGG 0.269871 8_1:+8289246 Msa1176270:CDS
TCTATCTTTCCATTCTTCTA+TGG 0.273578 8_1:-8286564 None:intergenic
TCTGCAAATTGCAACTCTTT+TGG 0.287680 8_1:+8285505 Msa1176270:five_prime_UTR
AAGCAAAGAAGAGTTCAATT+TGG 0.293163 8_1:-8284987 None:intergenic
GTTCTTACATAATGATCTTC+AGG 0.295740 8_1:+8287630 Msa1176270:CDS
ACTTTATAGCACTTGCTCTT+AGG 0.295870 8_1:-8288622 None:intergenic
AATATTGGAAGAAATTAAAA+AGG 0.297339 8_1:+8285998 Msa1176270:CDS
AGACTCCGCGTTTCCGCATT+TGG 0.306915 8_1:+8289844 Msa1176270:three_prime_UTR
AAGTCCATTTCTCTTTAAAC+TGG 0.307135 8_1:-8287689 None:intergenic
TGAATTATCCAAATATGATT+TGG 0.309894 8_1:+8287007 Msa1176270:CDS
GGTTGTGTCACACTGATTAA+AGG 0.311802 8_1:-8287898 None:intergenic
TCAAGGTTGCATACTTCTAT+TGG 0.318559 8_1:+8287052 Msa1176270:CDS
TTCCTCAATTCTTTCAAAAT+CGG 0.325438 8_1:-8285756 None:intergenic
TTTGCGAAACGGCAATCTTT+AGG 0.329672 8_1:+8286338 Msa1176270:CDS
GGATCAAATCATTGCTTTGT+TGG 0.331319 8_1:+8286268 Msa1176270:CDS
TGCTCGTGTTGATAAGAAAA+AGG 0.337238 8_1:+8286229 Msa1176270:CDS
TTTCTTAGTTCTACATCTCT+TGG 0.339374 8_1:+8289358 Msa1176270:CDS
TCACACAACCTAACCAATTC+TGG 0.340227 8_1:-8288584 None:intergenic
TTAGTGCAGTTGCTTGAAAT+TGG 0.341628 8_1:+8288992 Msa1176270:CDS
GGCCAATACATTAGCCGAAA+TGG 0.346085 8_1:+8287543 Msa1176270:CDS
TTGTTAGTGTTATTGATTCA+TGG 0.348618 8_1:+8285534 Msa1176270:five_prime_UTR
ATCTTTAGGTACTCGAATCT+TGG 0.353618 8_1:+8286352 Msa1176270:CDS
AATCTTGGAGAATCTGATTA+TGG 0.354496 8_1:+8289226 Msa1176270:CDS
TGCAGCAAGTTGCATAATTA+TGG 0.355094 8_1:-8287803 None:intergenic
AAGTACACCACCATCAAATA+AGG 0.363823 8_1:-8287590 None:intergenic
TTTATTTGTTAATGAATTGT+AGG 0.364173 8_1:+8285886 Msa1176270:CDS
TTCCATTTCGGCTAATGTAT+TGG 0.367156 8_1:-8287545 None:intergenic
TCTCAAATCATAGAAACTAT+TGG 0.367335 8_1:+8285651 Msa1176270:CDS
AGAAAAGTCTCTACATGCTT+TGG 0.370184 8_1:+8289387 Msa1176270:CDS
TGAACATATTTATAAATGAT+TGG 0.370188 8_1:-8288839 None:intergenic
TGACTGACACAAGGCGTAAA+AGG 0.371641 8_1:-8287947 None:intergenic
TGTGTTGGTGTGGTCATATC+TGG 0.371706 8_1:+8289760 Msa1176270:three_prime_UTR
AGGTCTTTCAGCCGGAATAT+TGG 0.377612 8_1:+8285983 Msa1176270:CDS
CTTCTTCCTTTAGCCGCATC+AGG 0.382728 8_1:+8285963 Msa1176270:CDS
CATGTGGAATAACCTTCTTT+TGG 0.384953 8_1:+8289621 Msa1176270:three_prime_UTR
GGAATTAACTGACCACAATA+AGG 0.387274 8_1:+8287564 Msa1176270:CDS
AGACCGATTCCGAAGCAAAA+AGG 0.388092 8_1:+8289085 Msa1176270:CDS
CTATCCAGTTTAAAGAGAAA+TGG 0.399393 8_1:+8287685 Msa1176270:CDS
GAAAATCGAGTCAGGGATAA+GGG 0.403660 8_1:+8286082 Msa1176270:CDS
CATACACACATCAAGTTTAT+GGG 0.404356 8_1:+8287768 Msa1176270:CDS
AGATGATGTAAAGATGATTA+TGG 0.405222 8_1:+8287522 Msa1176270:CDS
GAAATTGGCTGTAAAGTTCA+TGG 0.408788 8_1:+8289136 Msa1176270:CDS
TCATATCTGGTGTCCGTGTC+TGG 0.411523 8_1:+8289773 Msa1176270:three_prime_UTR
GTGGTCAGTTAATTCCATTT+CGG 0.414212 8_1:-8287557 None:intergenic
CTTCATCAGATGAGGATTGT+AGG 0.416308 8_1:-8288730 None:intergenic
CAGCTATACCAGAATTGGTT+AGG 0.419391 8_1:+8288576 Msa1176270:CDS
CAAAAGGGTTCTCAAATTCA+TGG 0.420706 8_1:+8285103 Msa1176270:five_prime_UTR
AATAAGGAGTCCTTATTTGA+TGG 0.424896 8_1:+8287580 Msa1176270:CDS
TGATCTGATGAAGTTTCAAC+AGG 0.425758 8_1:-8286425 None:intergenic
AGCTGCAAACCTACTTGCTC+TGG 0.425914 8_1:+8285842 Msa1176270:CDS
CTAGTAACAAAACCGGTGTT+TGG 0.427966 8_1:-8287846 None:intergenic
TCTGATCAATTTCTGGAAGA+TGG 0.428541 8_1:-8288784 None:intergenic
GTGCTCAGCTATACCAGAAT+TGG 0.431004 8_1:+8288571 Msa1176270:intron
TAGATTCTTAAGAGCCTTTG+TGG 0.431900 8_1:-8287665 None:intergenic
AGAAAATCGAGTCAGGGATA+AGG 0.432371 8_1:+8286081 Msa1176270:CDS
GAATCAATCGTCCATTCTCT+TGG 0.432492 8_1:+8286942 Msa1176270:CDS
TTCTTAGTTCTACATCTCTT+GGG 0.436279 8_1:+8289359 Msa1176270:CDS
ATTCATTGATCAGAAGGGTT+TGG 0.442509 8_1:+8285477 Msa1176270:five_prime_UTR
TATTTCAGTTTCCTTTCGTT+CGG 0.443580 8_1:-8286314 None:intergenic
GGACCACTCACTAGAAATCT+TGG 0.446216 8_1:+8289211 Msa1176270:CDS
TCCTATCACACATGATGTTA+TGG 0.452740 8_1:+8286397 Msa1176270:CDS
TCTCTCTTTAAGTCTTTCTC+AGG 0.453038 8_1:+8285132 Msa1176270:five_prime_UTR
TCAAATGTACAAGCAATTTG+AGG 0.454416 8_1:-8289966 None:intergenic
TTCGCGATTCATAATATCAA+TGG 0.454754 8_1:-8285814 None:intergenic
AAAGGCTGAAGCTATGCAAA+TGG 0.456067 8_1:+8286247 Msa1176270:CDS
AATCTCATTGCTAACGCTGT+TGG 0.459825 8_1:+8286143 Msa1176270:CDS
CCATTCTCTTGGACGACGTC+AGG 0.464203 8_1:+8286953 Msa1176270:CDS
GCACTGAAACTTCATATTCA+AGG 0.466646 8_1:+8289660 Msa1176270:three_prime_UTR
ATCAACATTCTCTACTATGA+TGG 0.468562 8_1:-8288678 None:intergenic
ACCATAACATCATGTGTGAT+AGG 0.470871 8_1:-8286398 None:intergenic
GTTGTGTCACACTGATTAAA+GGG 0.473597 8_1:-8287897 None:intergenic
TGGATTTAAGGCTGCGGTAG+CGG 0.475565 8_1:+8286043 Msa1176270:CDS
ATTGTAGGTCGATTGTAAAT+CGG 0.479909 8_1:+8285901 Msa1176270:CDS
GAAGAGTTCAATTTGGAAAG+TGG 0.480659 8_1:-8284980 None:intergenic
GAACACATTGGAAAAGTTCA+AGG 0.482125 8_1:+8287035 Msa1176270:CDS
AGATGTGTATATATAAAGAT+AGG 0.483572 8_1:+8289895 Msa1176270:three_prime_UTR
TCACACTGATTAAAGGGAAA+AGG 0.486884 8_1:-8287891 None:intergenic
TAGAGATGCAACTGATGTAT+TGG 0.486984 8_1:+8287109 Msa1176270:CDS
CTCAAAACTGATGTATCTAA+AGG 0.487050 8_1:-8286518 None:intergenic
TGTGATAATATGGAGAAAGC+TGG 0.488266 8_1:+8286023 Msa1176270:CDS
GCAGAGTTCAAACAGTTGTA+TGG 0.490896 8_1:+8289427 Msa1176270:CDS
GTGAGCAGAGAGAGCAACAC+AGG 0.492544 8_1:+8286684 Msa1176270:CDS
AGAGGAAATACATTCTGCTA+TGG 0.492784 8_1:+8288751 Msa1176270:CDS
TTATTATTGGTGCTATGTGT+TGG 0.492943 8_1:+8289745 Msa1176270:three_prime_UTR
CTATTGGTGACTATGTCTAA+TGG 0.493151 8_1:+8287068 Msa1176270:CDS
TATAAAGATAGGAGCTCCAT+TGG 0.493151 8_1:+8289906 Msa1176270:three_prime_UTR
AGAGAAGTGCAATAGAGAAG+TGG 0.495497 8_1:+8286456 Msa1176270:CDS
CCTGACGTCGTCCAAGAGAA+TGG 0.499586 8_1:-8286953 None:intergenic
TTACTGCAACGTCTCTCGAC+AGG 0.500509 8_1:+8287194 Msa1176270:CDS
GTTCGAGAAACCGTGACATA+AGG 0.502733 8_1:+8286756 Msa1176270:CDS
ATAGAGAAGTGGTTTGAAGA+AGG 0.503302 8_1:+8286467 Msa1176270:CDS
GCTTTATTAACATTGATTGA+AGG 0.507058 8_1:+8289271 Msa1176270:CDS
TGTAAGAACAAGTGAAGAAG+AGG 0.509834 8_1:-8287616 None:intergenic
GCCGCATCAGGTCTTTCAGC+CGG 0.509865 8_1:+8285975 Msa1176270:CDS
AGAGAGAGCAACACAGGGAA+TGG 0.509905 8_1:+8286690 Msa1176270:CDS
TGTTAGTGTTATTGATTCAT+GGG 0.511805 8_1:+8285535 Msa1176270:five_prime_UTR
GAAAGACCTGATGCGGCTAA+AGG 0.513497 8_1:-8285969 None:intergenic
ACTTTACAGCCAATTTCACT+TGG 0.514907 8_1:-8289130 None:intergenic
AACTGAAATACTTTGCGAAA+CGG 0.517151 8_1:+8286327 Msa1176270:CDS
TTTCCTTTCGTTCGGTGATG+AGG 0.520051 8_1:-8286306 None:intergenic
ATGAAGTTTCAGTGCTACAT+AGG 0.520359 8_1:-8289652 None:intergenic
CACAAGTGTGAAGGTCATAT+CGG 0.522103 8_1:-8289694 None:intergenic
TCAGAATCTAGTAACAAAAC+CGG 0.522197 8_1:-8287853 None:intergenic
AGTTACTCCTTTGAAGATCT+CGG 0.524906 8_1:-8288874 None:intergenic
ATCCATGTCAGCTAGAGTAT+TGG 0.527658 8_1:+8289507 Msa1176270:CDS
AGAAGCATTCATTGATCAGA+AGG 0.527727 8_1:+8285471 Msa1176270:five_prime_UTR
ACAATCCTCATCTGATGAAG+AGG 0.529667 8_1:+8288733 Msa1176270:CDS
AAAAGATAATGAAGAAGCTA+AGG 0.530212 8_1:+8286811 Msa1176270:CDS
TGAAACAATCCATAGAAGAA+TGG 0.531982 8_1:+8286555 Msa1176270:CDS
GAGGAAATACATTCTGCTAT+GGG 0.532753 8_1:+8288752 Msa1176270:CDS
TGTGTATGCTATGATGATAA+AGG 0.533495 8_1:-8287753 None:intergenic
TCTAAAGGAATCAGCGTCAA+AGG 0.539843 8_1:-8286503 None:intergenic
ACAGCTTATTTAAGTTCTAG+TGG 0.541781 8_1:+8285392 Msa1176270:five_prime_UTR
GTCTTGATATTTGAAGATGA+AGG 0.544138 8_1:-8287970 None:intergenic
AAATGAGAAGTCGACGATGA+AGG 0.546935 8_1:+8286172 Msa1176270:CDS
GACTTAACTCAGAGGAGTAA+TGG 0.550076 8_1:+8289475 Msa1176270:CDS
TATTTCCTCTTCATCAGATG+AGG 0.554394 8_1:-8288738 None:intergenic
GAGATCAAGCAACGGTCGCA+CGG 0.556041 8_1:-8287731 None:intergenic
AAGTGTGGATAGAAGAACTA+AGG 0.556241 8_1:+8284940 None:intergenic
TGAGAAATTGCAGTTGAGGT+AGG 0.556553 8_1:-8285633 None:intergenic
AGTCTCTACATGCTTTGGAA+AGG 0.556909 8_1:+8289392 Msa1176270:CDS
GAAGGTGAAAGACTAGAGAG+TGG 0.557912 8_1:+8289289 Msa1176270:CDS
TAGGTTAAAACACCAAAAGA+AGG 0.558816 8_1:-8289633 None:intergenic
CAGTTCCAACACACTTGGAG+TGG 0.563324 8_1:+8288933 Msa1176270:CDS
ACTCAATGGATTCTAGATGC+TGG 0.565189 8_1:+8288809 Msa1176270:CDS
AGCCAATACTCTAGCTGACA+TGG 0.568604 8_1:-8289509 None:intergenic
CAGCCTCATCACCGAACGAA+AGG 0.569243 8_1:+8286303 Msa1176270:CDS
TGATCAGAATGTTATACTGA+TGG 0.569744 8_1:+8287148 Msa1176270:CDS
TAGCTTAGCTTGCATAGCAA+AGG 0.569883 8_1:-8289596 None:intergenic
TTAATCAGTGTGACACAACC+TGG 0.570231 8_1:+8287901 Msa1176270:CDS
TTCTCTTGGACGACGTCAGG+AGG 0.572987 8_1:+8286956 Msa1176270:CDS
TCTCCAAGATTTCTAGTGAG+TGG 0.576851 8_1:-8289214 None:intergenic
GATTTGAGAAATTGCAGTTG+AGG 0.578462 8_1:-8285637 None:intergenic
ATTGCTGCATTGTAAGATGA+TGG 0.578760 8_1:+8285587 Msa1176270:exon
AACTTAGTCGAGAAAGCAGT+CGG 0.581164 8_1:+8288893 Msa1176270:CDS
TGGAACTGTAAAACGACGTA+AGG 0.584828 8_1:-8288918 None:intergenic
GAAGCATTCATTGATCAGAA+GGG 0.585310 8_1:+8285472 Msa1176270:five_prime_UTR
TTGGACGACGTCAGGAGGAG+AGG 0.590135 8_1:+8286961 Msa1176270:CDS
CAAAAGAAGGTTATTCCACA+TGG 0.594467 8_1:-8289620 None:intergenic
AACTAGAGGCATTTGAGCTG+AGG 0.594631 8_1:-8289452 None:intergenic
TCCGGCTGAAAGACCTGATG+CGG 0.596788 8_1:-8285976 None:intergenic
TATCAAGACGAAGCTAAATG+AGG 0.597576 8_1:+8287984 Msa1176270:CDS
GAATGTTATACTGATGGCAA+AGG 0.598582 8_1:+8287154 Msa1176270:CDS
ATCAAGTGTGGAACCAGACA+CGG 0.598838 8_1:-8289786 None:intergenic
GGTGAAAGACTAGAGAGTGG+TGG 0.599671 8_1:+8289292 Msa1176270:CDS
ATTGGTGCTATGTGTTGGTG+TGG 0.600938 8_1:+8289750 Msa1176270:three_prime_UTR
GGACAATAAAATGACTGTAG+AGG 0.605850 8_1:-8286377 None:intergenic
CAAATAAGGACTCCTTATTG+TGG 0.607893 8_1:-8287576 None:intergenic
GAAAGCTGGATTTAAGGCTG+CGG 0.609553 8_1:+8286037 Msa1176270:CDS
GTAGAGACCGAGATCTTCAA+AGG 0.609913 8_1:+8288867 Msa1176270:CDS
AAATTGATCAGATAACTCAA+TGG 0.612214 8_1:+8288795 Msa1176270:CDS
GTACATCATTAGCACTGCAT+AGG 0.612506 8_1:-8285680 None:intergenic
GAGCTCGATTCCTTATGTCA+CGG 0.612669 8_1:-8286766 None:intergenic
AAGGAGTCCTTATTTGATGG+TGG 0.615690 8_1:+8287583 Msa1176270:CDS
ATTTATAAATATGTTCAAGA+CGG 0.616007 8_1:+8288845 Msa1176270:CDS
ATAAGCTGTTTATCCAAACA+AGG 0.616722 8_1:-8285378 None:intergenic
AAGGAGATAAGCAAGGCGCT+AGG 0.623122 8_1:+8285939 Msa1176270:CDS
CTCTGAGTTAAGTCAACTAG+AGG 0.627340 8_1:-8289466 None:intergenic
ACTTGAAATGATTCGACAAG+GGG 0.629255 8_1:+8287708 Msa1176270:CDS
GAGGAACATCATATCAAGTG+TGG 0.630097 8_1:-8289798 None:intergenic
GGTGAAAACAGTGGCCACAA+AGG 0.630926 8_1:+8287651 Msa1176270:CDS
GACTTGAAATGATTCGACAA+GGG 0.634541 8_1:+8287707 Msa1176270:CDS
CTCTCAAGATGTCCAAACAC+CGG 0.634839 8_1:+8287834 Msa1176270:CDS
GGACTTGAAATGATTCGACA+AGG 0.635847 8_1:+8287706 Msa1176270:CDS
TCATGAGAGCAAGCCAAATG+CGG 0.637834 8_1:-8289857 None:intergenic
TACGACATTCCAGAGCAAGT+AGG 0.646446 8_1:-8285851 None:intergenic
AGATGAAGGTGACTGACACA+AGG 0.652496 8_1:-8287956 None:intergenic
GATTCATAATATCAATGGCA+CGG 0.654224 8_1:-8285809 None:intergenic
TATCACACATGATGTTATGG+TGG 0.655301 8_1:+8286400 Msa1176270:CDS
GCAAGCCAAATGCGGAAACG+CGG 0.659149 8_1:-8289849 None:intergenic
GATTTGGCGCGAGAACACAT+TGG 0.659835 8_1:+8287023 Msa1176270:CDS
CAGGGAATGGATGATACTTG+AGG 0.659956 8_1:+8286703 Msa1176270:CDS
TGAGCAGAGAGAGCAACACA+GGG 0.661066 8_1:+8286685 Msa1176270:CDS
ATAGCACCAATAATAATCTG+AGG 0.661090 8_1:-8289738 None:intergenic
ATCTGATTATGGAGTCTGTG+AGG 0.673837 8_1:+8289237 Msa1176270:CDS
TCACACGAAGGAGATAAGCA+AGG 0.685403 8_1:+8285932 Msa1176270:CDS
CTCTAGTTGACTTAACTCAG+AGG 0.686980 8_1:+8289467 Msa1176270:CDS
TTGTGTAGTCACAAGTGTGA+AGG 0.692991 8_1:-8289703 None:intergenic
TCGGTTAGAAAGTCACACGA+AGG 0.704541 8_1:+8285920 Msa1176270:CDS
TGATCTTCAGGTGAAAACAG+TGG 0.704631 8_1:+8287642 Msa1176270:CDS
TGCAAGCTAAGCTAACCATG+TGG 0.721667 8_1:+8289605 Msa1176270:three_prime_UTR
GGAATGTCGTAAGAAGAGCA+AGG 0.723044 8_1:+8285863 Msa1176270:CDS
TGATAAAGGAGATCAAGCAA+CGG 0.733153 8_1:-8287739 None:intergenic
ATTGGCTGTAAAGTTCATGG+AGG 0.759451 8_1:+8289139 Msa1176270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTAAGAAATTTTATTATTAA+TGG - chr8_1:8289346-8289365 None:intergenic 10.0%
!!! TTTATTTGTTAATGAATTGT+AGG + chr8_1:8285886-8285905 Msa1176270:CDS 15.0%
!! AATATTGGAAGAAATTAAAA+AGG + chr8_1:8285998-8286017 Msa1176270:CDS 15.0%
!! ACTAGTATTAAAATAGAAAA+TGG - chr8_1:8286857-8286876 None:intergenic 15.0%
!!! AATGACATTTTATAATTTTG+GGG - chr8_1:8288126-8288145 None:intergenic 15.0%
!!! GAATGACATTTTATAATTTT+GGG - chr8_1:8288127-8288146 None:intergenic 15.0%
!!! TGAATGACATTTTATAATTT+TGG - chr8_1:8288128-8288147 None:intergenic 15.0%
!! TGAACATATTTATAAATGAT+TGG - chr8_1:8288842-8288861 None:intergenic 15.0%
!! ATTTATAAATATGTTCAAGA+CGG + chr8_1:8288845-8288864 Msa1176270:CDS 15.0%
!!! TTTTTTTAATACAAATACTG+TGG + chr8_1:8290013-8290032 Msa1176270:three_prime_UTR 15.0%
!! GACATAAAAAAGAAGAAAAT+AGG - chr8_1:8285228-8285247 None:intergenic 20.0%
!!! TGTGAATAAAGATAGTTTTA+AGG + chr8_1:8285704-8285723 Msa1176270:CDS 20.0%
!!! TTTAATTTCTTCCAATATTC+CGG - chr8_1:8285997-8286016 None:intergenic 20.0%
!! TAAAAAGGTTTGTGATAATA+TGG + chr8_1:8286013-8286032 Msa1176270:CDS 20.0%
!! AAAGAAAAAATACATCAGTT+TGG + chr8_1:8286614-8286633 Msa1176270:CDS 20.0%
!! TGAATTATCCAAATATGATT+TGG + chr8_1:8287007-8287026 Msa1176270:CDS 20.0%
!! AATTTCAACAACAATTTAGA+TGG + chr8_1:8287358-8287377 Msa1176270:intron 20.0%
!! TGTCATATTTATTAATCATC+AGG - chr8_1:8287419-8287438 None:intergenic 20.0%
!! TATAATGACATTAAACAATG+TGG - chr8_1:8287481-8287500 None:intergenic 20.0%
!! TCCAAAACTATTTATAACTA+CGG - chr8_1:8288025-8288044 None:intergenic 20.0%
!! CTAATTTACCTATGAAATTT+AGG + chr8_1:8288255-8288274 Msa1176270:intron 20.0%
!! ATTTGCAAGTAATTAATATC+TGG - chr8_1:8288318-8288337 None:intergenic 20.0%
!! GTTAACTGAATATAAAATTC+AGG - chr8_1:8288355-8288374 None:intergenic 20.0%
!! ATGAAAATAGTTTCAACATT+CGG - chr8_1:8288497-8288516 None:intergenic 20.0%
!! AGATGTGTATATATAAAGAT+AGG + chr8_1:8289895-8289914 Msa1176270:three_prime_UTR 20.0%
!!! ATGCATTGATTTTTTTTCTT+TGG + chr8_1:8289931-8289950 Msa1176270:three_prime_UTR 20.0%
!!! TGCATTGATTTTTTTTCTTT+GGG + chr8_1:8289932-8289951 Msa1176270:three_prime_UTR 20.0%
! ATCTTAGCAAAAACAATGAA+AGG - chr8_1:8285054-8285073 None:intergenic 25.0%
!! AAAGTTTCTTTTGCTCAAAA+GGG + chr8_1:8285088-8285107 Msa1176270:five_prime_UTR 25.0%
! CTTCTATGTAGAAAAGAAAT+TGG + chr8_1:8285293-8285312 Msa1176270:intron 25.0%
!!! TTGTTAGTGTTATTGATTCA+TGG + chr8_1:8285534-8285553 Msa1176270:five_prime_UTR 25.0%
!!! TGTTAGTGTTATTGATTCAT+GGG + chr8_1:8285535-8285554 Msa1176270:five_prime_UTR 25.0%
! TCTCAAATCATAGAAACTAT+TGG + chr8_1:8285651-8285670 Msa1176270:CDS 25.0%
!! TAAGGAACTTAGTTCTTATT+TGG + chr8_1:8285722-8285741 Msa1176270:CDS 25.0%
! TTCCTCAATTCTTTCAAAAT+CGG - chr8_1:8285759-8285778 None:intergenic 25.0%
!!! GATTGTTTCAAAGTTTTGTT+AGG - chr8_1:8286545-8286564 None:intergenic 25.0%
! CAAGTTCTTATACAAATTCT+TGG + chr8_1:8286734-8286753 Msa1176270:CDS 25.0%
! AAAAGATAATGAAGAAGCTA+AGG + chr8_1:8286811-8286830 Msa1176270:CDS 25.0%
! TATAGAAAAAGAACTAGCAA+TGG - chr8_1:8287272-8287291 None:intergenic 25.0%
! AACAATTTAGATGGTTAACA+CGG + chr8_1:8287367-8287386 Msa1176270:intron 25.0%
!! TTATACATGATTTTCTATGC+AGG + chr8_1:8287496-8287515 Msa1176270:intron 25.0%
! AGATGATGTAAAGATGATTA+TGG + chr8_1:8287522-8287541 Msa1176270:CDS 25.0%
!! ACCGTAGTTATAAATAGTTT+TGG + chr8_1:8288021-8288040 Msa1176270:intron 25.0%
!!! TAAATTAGTTTCTAGTGAAC+TGG - chr8_1:8288243-8288262 None:intergenic 25.0%
! TCGACAATAAAGTTAACAAA+TGG + chr8_1:8288391-8288410 Msa1176270:intron 25.0%
! GATCGAAAATTTACAATCTT+CGG + chr8_1:8288422-8288441 Msa1176270:intron 25.0%
!!! TATAAAGTTGTTTTCATGCT+TGG + chr8_1:8288637-8288656 Msa1176270:CDS 25.0%
! AAATTGATCAGATAACTCAA+TGG + chr8_1:8288795-8288814 Msa1176270:CDS 25.0%
!! GCTTTATTAACATTGATTGA+AGG + chr8_1:8289271-8289290 Msa1176270:CDS 25.0%
!!! TTTTAAGGAAGAAAAAATGC+TGG + chr8_1:8289565-8289584 Msa1176270:exon 25.0%
! CTATTTCCTCAGATTATTAT+TGG + chr8_1:8289732-8289751 Msa1176270:three_prime_UTR 25.0%
AAGCAAAGAAGAGTTCAATT+TGG - chr8_1:8284990-8285009 None:intergenic 30.0%
CTTCATTCACTTCTTCAAAA+TGG + chr8_1:8285007-8285026 Msa1176270:five_prime_UTR 30.0%
! CAAAGTTTCTTTTGCTCAAA+AGG + chr8_1:8285087-8285106 Msa1176270:five_prime_UTR 30.0%
TATTCAGAGAAAGCAAACAA+GGG - chr8_1:8285180-8285199 None:intergenic 30.0%
ATATTCAGAGAAAGCAAACA+AGG - chr8_1:8285181-8285200 None:intergenic 30.0%
TATCAGATTTAGACCTTGTT+TGG + chr8_1:8285365-8285384 Msa1176270:intron 30.0%
ATAAGCTGTTTATCCAAACA+AGG - chr8_1:8285381-8285400 None:intergenic 30.0%
! ACAGCTTATTTAAGTTCTAG+TGG + chr8_1:8285392-8285411 Msa1176270:five_prime_UTR 30.0%
! ATTGATTCATGGGAAGAAAA+AGG + chr8_1:8285545-8285564 Msa1176270:five_prime_UTR 30.0%
!! AACCGATTTTGAAAGAATTG+AGG + chr8_1:8285754-8285773 Msa1176270:CDS 30.0%
GATTCATAATATCAATGGCA+CGG - chr8_1:8285812-8285831 None:intergenic 30.0%
TTCGCGATTCATAATATCAA+TGG - chr8_1:8285817-8285836 None:intergenic 30.0%
ATTGTAGGTCGATTGTAAAT+CGG + chr8_1:8285901-8285920 Msa1176270:CDS 30.0%
!! ATTTTAGAGAAAATCGAGTC+AGG + chr8_1:8286074-8286093 Msa1176270:CDS 30.0%
!! TTTTAGAGAAAATCGAGTCA+GGG + chr8_1:8286075-8286094 Msa1176270:CDS 30.0%
TATTTCAGTTTCCTTTCGTT+CGG - chr8_1:8286317-8286336 None:intergenic 30.0%
AACTGAAATACTTTGCGAAA+CGG + chr8_1:8286327-8286346 Msa1176270:CDS 30.0%
CTCAAAACTGATGTATCTAA+AGG - chr8_1:8286521-8286540 None:intergenic 30.0%
TGAAACAATCCATAGAAGAA+TGG + chr8_1:8286555-8286574 Msa1176270:CDS 30.0%
TCTATCTTTCCATTCTTCTA+TGG - chr8_1:8286567-8286586 None:intergenic 30.0%
AAGTTGTCTAAAAACTCTTG+AGG + chr8_1:8286655-8286674 Msa1176270:CDS 30.0%
! TATCTTTTGCTAGAATGCAA+AGG - chr8_1:8286799-8286818 None:intergenic 30.0%
! AACTAAACTTTCTTTTCTGC+AGG + chr8_1:8286890-8286909 Msa1176270:intron 30.0%
TGATCAGAATGTTATACTGA+TGG + chr8_1:8287148-8287167 Msa1176270:CDS 30.0%
ACATACATTAGTTGAGTCAT+CGG + chr8_1:8287236-8287255 Msa1176270:intron 30.0%
ACAATGTGGTTAATTGTGTT+CGG - chr8_1:8287467-8287486 None:intergenic 30.0%
! AATAAGGAGTCCTTATTTGA+TGG + chr8_1:8287580-8287599 Msa1176270:CDS 30.0%
GTTCTTACATAATGATCTTC+AGG + chr8_1:8287630-8287649 Msa1176270:CDS 30.0%
CTATCCAGTTTAAAGAGAAA+TGG + chr8_1:8287685-8287704 Msa1176270:CDS 30.0%
AAGTCCATTTCTCTTTAAAC+TGG - chr8_1:8287692-8287711 None:intergenic 30.0%
TGTGTATGCTATGATGATAA+AGG - chr8_1:8287756-8287775 None:intergenic 30.0%
CATACACACATCAAGTTTAT+GGG + chr8_1:8287768-8287787 Msa1176270:CDS 30.0%
TCAGAATCTAGTAACAAAAC+CGG - chr8_1:8287856-8287875 None:intergenic 30.0%
!! ATAATGTTTTGTTGTACACC+AGG - chr8_1:8287922-8287941 None:intergenic 30.0%
GTCTTGATATTTGAAGATGA+AGG - chr8_1:8287973-8287992 None:intergenic 30.0%
ATCATCGAAAATGCAAACAT+CGG + chr8_1:8288061-8288080 Msa1176270:intron 30.0%
ATGCAAACATCGGTATAAAT+AGG + chr8_1:8288071-8288090 Msa1176270:intron 30.0%
TTGCCAATTCGAAAAAATGA+GGG - chr8_1:8288097-8288116 None:intergenic 30.0%
TTTGCCAATTCGAAAAAATG+AGG - chr8_1:8288098-8288117 None:intergenic 30.0%
TGTCATTCAAAATAGTCCAT+CGG + chr8_1:8288139-8288158 Msa1176270:intron 30.0%
! TATGAAATTTAGGTTACCTC+CGG + chr8_1:8288265-8288284 Msa1176270:intron 30.0%
ATAGTTTCAACATTCGGAAA+AGG - chr8_1:8288491-8288510 None:intergenic 30.0%
ATCAACATTCTCTACTATGA+TGG - chr8_1:8288681-8288700 None:intergenic 30.0%
TGAGTTATCTGATCAATTTC+TGG - chr8_1:8288794-8288813 None:intergenic 30.0%
CAAAAAATTGTAGCTGAAAC+TGG + chr8_1:8288956-8288975 Msa1176270:CDS 30.0%
! CAAGTCATCATTTTGTCTTT+TGG + chr8_1:8289174-8289193 Msa1176270:CDS 30.0%
AATCTTGGAGAATCTGATTA+TGG + chr8_1:8289226-8289245 Msa1176270:CDS 30.0%
!! TTTCTTAGTTCTACATCTCT+TGG + chr8_1:8289358-8289377 Msa1176270:CDS 30.0%
!! TTCTTAGTTCTACATCTCTT+GGG + chr8_1:8289359-8289378 Msa1176270:CDS 30.0%
! GATCAGTCTTCATACTTTTA+AGG + chr8_1:8289550-8289569 Msa1176270:CDS 30.0%
TAGGTTAAAACACCAAAAGA+AGG - chr8_1:8289636-8289655 None:intergenic 30.0%
ATAGCACCAATAATAATCTG+AGG - chr8_1:8289741-8289760 None:intergenic 30.0%
!! TTATTATTGGTGCTATGTGT+TGG + chr8_1:8289745-8289764 Msa1176270:three_prime_UTR 30.0%
AAAAATCAATGCATGTCCAA+TGG - chr8_1:8289925-8289944 None:intergenic 30.0%
TCAAATGTACAAGCAATTTG+AGG - chr8_1:8289969-8289988 None:intergenic 30.0%
GAAGAGTTCAATTTGGAAAG+TGG - chr8_1:8284983-8285002 None:intergenic 35.0%
CAAAAGGGTTCTCAAATTCA+TGG + chr8_1:8285103-8285122 Msa1176270:five_prime_UTR 35.0%
TCTCTCTTTAAGTCTTTCTC+AGG + chr8_1:8285132-8285151 Msa1176270:five_prime_UTR 35.0%
AGAAGAAAATAGGTGCAAGT+TGG - chr8_1:8285218-8285237 None:intergenic 35.0%
!! AGAAGCATTCATTGATCAGA+AGG + chr8_1:8285471-8285490 Msa1176270:five_prime_UTR 35.0%
! GAAGCATTCATTGATCAGAA+GGG + chr8_1:8285472-8285491 Msa1176270:five_prime_UTR 35.0%
ATTCATTGATCAGAAGGGTT+TGG + chr8_1:8285477-8285496 Msa1176270:five_prime_UTR 35.0%
! TCTGCAAATTGCAACTCTTT+TGG + chr8_1:8285505-8285524 Msa1176270:five_prime_UTR 35.0%
ATTGCTGCATTGTAAGATGA+TGG + chr8_1:8285587-8285606 Msa1176270:exon 35.0%
! GTTGCAGATTTTCTTAGTTC+TGG + chr8_1:8285609-8285628 Msa1176270:CDS 35.0%
GATTTGAGAAATTGCAGTTG+AGG - chr8_1:8285640-8285659 None:intergenic 35.0%
TGAAAAAGTGAGTGATTCTG+AGG + chr8_1:8285779-8285798 Msa1176270:CDS 35.0%
TGTGATAATATGGAGAAAGC+TGG + chr8_1:8286023-8286042 Msa1176270:CDS 35.0%
TATGGAGAAAGCTGGATTTA+AGG + chr8_1:8286031-8286050 Msa1176270:CDS 35.0%
! TGCTCGTGTTGATAAGAAAA+AGG + chr8_1:8286229-8286248 Msa1176270:CDS 35.0%
GGATCAAATCATTGCTTTGT+TGG + chr8_1:8286268-8286287 Msa1176270:CDS 35.0%
ATCTTTAGGTACTCGAATCT+TGG + chr8_1:8286352-8286371 Msa1176270:CDS 35.0%
GGACAATAAAATGACTGTAG+AGG - chr8_1:8286380-8286399 None:intergenic 35.0%
TCCTATCACACATGATGTTA+TGG + chr8_1:8286397-8286416 Msa1176270:CDS 35.0%
ACCATAACATCATGTGTGAT+AGG - chr8_1:8286401-8286420 None:intergenic 35.0%
TATCACACATGATGTTATGG+TGG + chr8_1:8286400-8286419 Msa1176270:CDS 35.0%
TGATCTGATGAAGTTTCAAC+AGG - chr8_1:8286428-8286447 None:intergenic 35.0%
ATAGAGAAGTGGTTTGAAGA+AGG + chr8_1:8286467-8286486 Msa1176270:CDS 35.0%
GAACACATTGGAAAAGTTCA+AGG + chr8_1:8287035-8287054 Msa1176270:CDS 35.0%
TCAAGGTTGCATACTTCTAT+TGG + chr8_1:8287052-8287071 Msa1176270:CDS 35.0%
! CTATTGGTGACTATGTCTAA+TGG + chr8_1:8287068-8287087 Msa1176270:CDS 35.0%
TAGAGATGCAACTGATGTAT+TGG + chr8_1:8287109-8287128 Msa1176270:CDS 35.0%
GAATGTTATACTGATGGCAA+AGG + chr8_1:8287154-8287173 Msa1176270:CDS 35.0%
GTTAACACGGTTCAAATATG+TGG + chr8_1:8287380-8287399 Msa1176270:intron 35.0%
TTCCATTTCGGCTAATGTAT+TGG - chr8_1:8287548-8287567 None:intergenic 35.0%
GTGGTCAGTTAATTCCATTT+CGG - chr8_1:8287560-8287579 None:intergenic 35.0%
GGAATTAACTGACCACAATA+AGG + chr8_1:8287564-8287583 Msa1176270:CDS 35.0%
CAAATAAGGACTCCTTATTG+TGG - chr8_1:8287579-8287598 None:intergenic 35.0%
AAGTACACCACCATCAAATA+AGG - chr8_1:8287593-8287612 None:intergenic 35.0%
TGTAAGAACAAGTGAAGAAG+AGG - chr8_1:8287619-8287638 None:intergenic 35.0%
TAGATTCTTAAGAGCCTTTG+TGG - chr8_1:8287668-8287687 None:intergenic 35.0%
GACTTGAAATGATTCGACAA+GGG + chr8_1:8287707-8287726 Msa1176270:CDS 35.0%
ACTTGAAATGATTCGACAAG+GGG + chr8_1:8287708-8287727 Msa1176270:CDS 35.0%
TGATAAAGGAGATCAAGCAA+CGG - chr8_1:8287742-8287761 None:intergenic 35.0%
GCATACACACATCAAGTTTA+TGG + chr8_1:8287767-8287786 Msa1176270:CDS 35.0%
TGCAGCAAGTTGCATAATTA+TGG - chr8_1:8287806-8287825 None:intergenic 35.0%
! TCACACTGATTAAAGGGAAA+AGG - chr8_1:8287894-8287913 None:intergenic 35.0%
! GTTGTGTCACACTGATTAAA+GGG - chr8_1:8287900-8287919 None:intergenic 35.0%
TATCAAGACGAAGCTAAATG+AGG + chr8_1:8287984-8288003 Msa1176270:CDS 35.0%
GGAGGTAACCTAAATTTCAT+AGG - chr8_1:8288266-8288285 None:intergenic 35.0%
! ATGAAATTTAGGTTACCTCC+GGG + chr8_1:8288266-8288285 Msa1176270:intron 35.0%
ACTTTATAGCACTTGCTCTT+AGG - chr8_1:8288625-8288644 None:intergenic 35.0%
TATTTCCTCTTCATCAGATG+AGG - chr8_1:8288741-8288760 None:intergenic 35.0%
AGAGGAAATACATTCTGCTA+TGG + chr8_1:8288751-8288770 Msa1176270:CDS 35.0%
GAGGAAATACATTCTGCTAT+GGG + chr8_1:8288752-8288771 Msa1176270:CDS 35.0%
! TCTGATCAATTTCTGGAAGA+TGG - chr8_1:8288787-8288806 None:intergenic 35.0%
! AGTTACTCCTTTGAAGATCT+CGG - chr8_1:8288877-8288896 None:intergenic 35.0%
! TTTTACAGTTCCAACACACT+TGG + chr8_1:8288928-8288947 Msa1176270:CDS 35.0%
TTAGTGCAGTTGCTTGAAAT+TGG + chr8_1:8288992-8289011 Msa1176270:CDS 35.0%
!! CGCTGAATTTTCTAAAAGCT+CGG + chr8_1:8289051-8289070 Msa1176270:CDS 35.0%
! CATAGTAGTCCTTTTTGCTT+CGG - chr8_1:8289097-8289116 None:intergenic 35.0%
ACTTTACAGCCAATTTCACT+TGG - chr8_1:8289133-8289152 None:intergenic 35.0%
GAAATTGGCTGTAAAGTTCA+TGG + chr8_1:8289136-8289155 Msa1176270:CDS 35.0%
AGAAAAGTCTCTACATGCTT+TGG + chr8_1:8289387-8289406 Msa1176270:CDS 35.0%
CAAAAGAAGGTTATTCCACA+TGG - chr8_1:8289623-8289642 None:intergenic 35.0%
! CATGTGGAATAACCTTCTTT+TGG + chr8_1:8289621-8289640 Msa1176270:three_prime_UTR 35.0%
ATGAAGTTTCAGTGCTACAT+AGG - chr8_1:8289655-8289674 None:intergenic 35.0%
GCACTGAAACTTCATATTCA+AGG + chr8_1:8289660-8289679 Msa1176270:three_prime_UTR 35.0%
!! ACATTTTGGTCACAAGATTG+AGG - chr8_1:8289820-8289839 None:intergenic 35.0%
TATAAAGATAGGAGCTCCAT+TGG + chr8_1:8289906-8289925 Msa1176270:three_prime_UTR 35.0%
ACTGTGGTGCTTAAGAAAAA+AGG + chr8_1:8290029-8290048 Msa1176270:three_prime_UTR 35.0%
TGAGAAATTGCAGTTGAGGT+AGG - chr8_1:8285636-8285655 None:intergenic 40.0%
GTACATCATTAGCACTGCAT+AGG - chr8_1:8285683-8285702 None:intergenic 40.0%
AGAAAATCGAGTCAGGGATA+AGG + chr8_1:8286081-8286100 Msa1176270:CDS 40.0%
GAAAATCGAGTCAGGGATAA+GGG + chr8_1:8286082-8286101 Msa1176270:CDS 40.0%
AATCTCATTGCTAACGCTGT+TGG + chr8_1:8286143-8286162 Msa1176270:CDS 40.0%
AAATGAGAAGTCGACGATGA+AGG + chr8_1:8286172-8286191 Msa1176270:CDS 40.0%
AAAGGCTGAAGCTATGCAAA+TGG + chr8_1:8286247-8286266 Msa1176270:CDS 40.0%
TTTGCGAAACGGCAATCTTT+AGG + chr8_1:8286338-8286357 Msa1176270:CDS 40.0%
! AGAGAAGTGCAATAGAGAAG+TGG + chr8_1:8286456-8286475 Msa1176270:CDS 40.0%
TCTAAAGGAATCAGCGTCAA+AGG - chr8_1:8286506-8286525 None:intergenic 40.0%
GAATCAATCGTCCATTCTCT+TGG + chr8_1:8286942-8286961 Msa1176270:CDS 40.0%
TTCTCGCGCCAAATCATATT+TGG - chr8_1:8287018-8287037 None:intergenic 40.0%
! AAGGAGTCCTTATTTGATGG+TGG + chr8_1:8287583-8287602 Msa1176270:CDS 40.0%
TGATCTTCAGGTGAAAACAG+TGG + chr8_1:8287642-8287661 Msa1176270:CDS 40.0%
GGACTTGAAATGATTCGACA+AGG + chr8_1:8287706-8287725 Msa1176270:CDS 40.0%
CTAGTAACAAAACCGGTGTT+TGG - chr8_1:8287849-8287868 None:intergenic 40.0%
! GGTTGTGTCACACTGATTAA+AGG - chr8_1:8287901-8287920 None:intergenic 40.0%
TTAATCAGTGTGACACAACC+TGG + chr8_1:8287901-8287920 Msa1176270:CDS 40.0%
!!! AGGCCCTCATTTTTTCGAAT+TGG + chr8_1:8288091-8288110 Msa1176270:intron 40.0%
TAACGACAGAAGTTAACCGA+TGG - chr8_1:8288158-8288177 None:intergenic 40.0%
CTATGATGTGGCACGTTAAT+TGG + chr8_1:8288182-8288201 Msa1176270:intron 40.0%
! TGAAATTTAGGTTACCTCCG+GGG + chr8_1:8288267-8288286 Msa1176270:intron 40.0%
AATTACTGACAAACTTGCCC+CGG - chr8_1:8288287-8288306 None:intergenic 40.0%
! GAGCACTGTTCAAACATAAG+TGG - chr8_1:8288557-8288576 None:intergenic 40.0%
CAGCTATACCAGAATTGGTT+AGG + chr8_1:8288576-8288595 Msa1176270:CDS 40.0%
TCACACAACCTAACCAATTC+TGG - chr8_1:8288587-8288606 None:intergenic 40.0%
CTTCATCAGATGAGGATTGT+AGG - chr8_1:8288733-8288752 None:intergenic 40.0%
ACAATCCTCATCTGATGAAG+AGG + chr8_1:8288733-8288752 Msa1176270:CDS 40.0%
! ACTCAATGGATTCTAGATGC+TGG + chr8_1:8288809-8288828 Msa1176270:CDS 40.0%
AACTTAGTCGAGAAAGCAGT+CGG + chr8_1:8288893-8288912 Msa1176270:CDS 40.0%
TGGAACTGTAAAACGACGTA+AGG - chr8_1:8288921-8288940 None:intergenic 40.0%
! AGTCCTTTTTGCTTCGGAAT+CGG - chr8_1:8289091-8289110 None:intergenic 40.0%
TTCTCAGCTCCAAGTGAAAT+TGG + chr8_1:8289121-8289140 Msa1176270:CDS 40.0%
ATTGGCTGTAAAGTTCATGG+AGG + chr8_1:8289139-8289158 Msa1176270:CDS 40.0%
!! TCTCCAAGATTTCTAGTGAG+TGG - chr8_1:8289217-8289236 None:intergenic 40.0%
ATCTGATTATGGAGTCTGTG+AGG + chr8_1:8289237-8289256 Msa1176270:CDS 40.0%
!! AGTCTCTACATGCTTTGGAA+AGG + chr8_1:8289392-8289411 Msa1176270:CDS 40.0%
CTCTGAGTTAAGTCAACTAG+AGG - chr8_1:8289469-8289488 None:intergenic 40.0%
! CTCTAGTTGACTTAACTCAG+AGG + chr8_1:8289467-8289486 Msa1176270:CDS 40.0%
GACTTAACTCAGAGGAGTAA+TGG + chr8_1:8289475-8289494 Msa1176270:CDS 40.0%
ATCCATGTCAGCTAGAGTAT+TGG + chr8_1:8289507-8289526 Msa1176270:CDS 40.0%
!! TAGCTTAGCTTGCATAGCAA+AGG - chr8_1:8289599-8289618 None:intergenic 40.0%
CACAAGTGTGAAGGTCATAT+CGG - chr8_1:8289697-8289716 None:intergenic 40.0%
TTGTGTAGTCACAAGTGTGA+AGG - chr8_1:8289706-8289725 None:intergenic 40.0%
GAGGAACATCATATCAAGTG+TGG - chr8_1:8289801-8289820 None:intergenic 40.0%
TACGACATTCCAGAGCAAGT+AGG - chr8_1:8285854-8285873 None:intergenic 45.0%
GGAATGTCGTAAGAAGAGCA+AGG + chr8_1:8285863-8285882 Msa1176270:CDS 45.0%
TCGGTTAGAAAGTCACACGA+AGG + chr8_1:8285920-8285939 Msa1176270:CDS 45.0%
TCACACGAAGGAGATAAGCA+AGG + chr8_1:8285932-8285951 Msa1176270:CDS 45.0%
AGGTCTTTCAGCCGGAATAT+TGG + chr8_1:8285983-8286002 Msa1176270:CDS 45.0%
! GAAAGCTGGATTTAAGGCTG+CGG + chr8_1:8286037-8286056 Msa1176270:CDS 45.0%
! TTTCCTTTCGTTCGGTGATG+AGG - chr8_1:8286309-8286328 None:intergenic 45.0%
CAGGGAATGGATGATACTTG+AGG + chr8_1:8286703-8286722 Msa1176270:CDS 45.0%
GTTCGAGAAACCGTGACATA+AGG + chr8_1:8286756-8286775 Msa1176270:CDS 45.0%
GAGCTCGATTCCTTATGTCA+CGG - chr8_1:8286769-8286788 None:intergenic 45.0%
GGCCAATACATTAGCCGAAA+TGG + chr8_1:8287543-8287562 Msa1176270:CDS 45.0%
CTCTCAAGATGTCCAAACAC+CGG + chr8_1:8287834-8287853 Msa1176270:CDS 45.0%
TGACTGACACAAGGCGTAAA+AGG - chr8_1:8287950-8287969 None:intergenic 45.0%
AGATGAAGGTGACTGACACA+AGG - chr8_1:8287959-8287978 None:intergenic 45.0%
CGGTTAACTTCTGTCGTTAG+AGG + chr8_1:8288159-8288178 Msa1176270:intron 45.0%
TGTCGTTAGAGGCTATGATG+TGG + chr8_1:8288170-8288189 Msa1176270:intron 45.0%
ATTCGGAAAAGGCAAGTGCA+TGG - chr8_1:8288480-8288499 None:intergenic 45.0%
GTGCTCAGCTATACCAGAAT+TGG + chr8_1:8288571-8288590 Msa1176270:intron 45.0%
GTAGAGACCGAGATCTTCAA+AGG + chr8_1:8288867-8288886 Msa1176270:CDS 45.0%
! TTTTGCCACTCCAAGTGTGT+TGG - chr8_1:8288941-8288960 None:intergenic 45.0%
! AGACCGATTCCGAAGCAAAA+AGG + chr8_1:8289085-8289104 Msa1176270:CDS 45.0%
! CTTTTGGCAGCTGAAGCAAT+TGG + chr8_1:8289190-8289209 Msa1176270:CDS 45.0%
GGACCACTCACTAGAAATCT+TGG + chr8_1:8289211-8289230 Msa1176270:CDS 45.0%
GAAGGTGAAAGACTAGAGAG+TGG + chr8_1:8289289-8289308 Msa1176270:CDS 45.0%
!! AACTAGAGGCATTTGAGCTG+AGG - chr8_1:8289455-8289474 None:intergenic 45.0%
AGCCAATACTCTAGCTGACA+TGG - chr8_1:8289512-8289531 None:intergenic 45.0%
TGCAAGCTAAGCTAACCATG+TGG + chr8_1:8289605-8289624 Msa1176270:three_prime_UTR 45.0%
!! ATTGGTGCTATGTGTTGGTG+TGG + chr8_1:8289750-8289769 Msa1176270:three_prime_UTR 45.0%
! TGTGTTGGTGTGGTCATATC+TGG + chr8_1:8289760-8289779 Msa1176270:three_prime_UTR 45.0%
ATCAAGTGTGGAACCAGACA+CGG - chr8_1:8289789-8289808 None:intergenic 45.0%
! CGCGGAGTCTCAAAACATTT+TGG - chr8_1:8289834-8289853 None:intergenic 45.0%
TCATGAGAGCAAGCCAAATG+CGG - chr8_1:8289860-8289879 None:intergenic 45.0%
AGCTGCAAACCTACTTGCTC+TGG + chr8_1:8285842-8285861 Msa1176270:CDS 50.0%
! AAGGAGATAAGCAAGGCGCT+AGG + chr8_1:8285939-8285958 Msa1176270:CDS 50.0%
CTTCTTCCTTTAGCCGCATC+AGG + chr8_1:8285963-8285982 Msa1176270:CDS 50.0%
GAAAGACCTGATGCGGCTAA+AGG - chr8_1:8285972-8285991 None:intergenic 50.0%
! TGGATTTAAGGCTGCGGTAG+CGG + chr8_1:8286043-8286062 Msa1176270:CDS 50.0%
TGAGCAGAGAGAGCAACACA+GGG + chr8_1:8286685-8286704 Msa1176270:CDS 50.0%
AGAGAGAGCAACACAGGGAA+TGG + chr8_1:8286690-8286709 Msa1176270:CDS 50.0%
GATTTGGCGCGAGAACACAT+TGG + chr8_1:8287023-8287042 Msa1176270:CDS 50.0%
TTACTGCAACGTCTCTCGAC+AGG + chr8_1:8287194-8287213 Msa1176270:CDS 50.0%
GGTGAAAACAGTGGCCACAA+AGG + chr8_1:8287651-8287670 Msa1176270:CDS 50.0%
CAGTTCCAACACACTTGGAG+TGG + chr8_1:8288933-8288952 Msa1176270:CDS 50.0%
!! CGCTGCACGTTGTTTTGTCA+AGG - chr8_1:8289023-8289042 None:intergenic 50.0%
TGGAGTCTGTGAGGCTTCTT+TGG + chr8_1:8289246-8289265 Msa1176270:CDS 50.0%
GGTGAAAGACTAGAGAGTGG+TGG + chr8_1:8289292-8289311 Msa1176270:CDS 50.0%
TCATATCTGGTGTCCGTGTC+TGG + chr8_1:8289773-8289792 Msa1176270:three_prime_UTR 50.0%
TCCGGCTGAAAGACCTGATG+CGG - chr8_1:8285979-8285998 None:intergenic 55.0%
CAGCCTCATCACCGAACGAA+AGG + chr8_1:8286303-8286322 Msa1176270:CDS 55.0%
GTGAGCAGAGAGAGCAACAC+AGG + chr8_1:8286684-8286703 Msa1176270:CDS 55.0%
CCTGACGTCGTCCAAGAGAA+TGG - chr8_1:8286956-8286975 None:intergenic 55.0%
CCATTCTCTTGGACGACGTC+AGG + chr8_1:8286953-8286972 Msa1176270:CDS 55.0%
TTCTCTTGGACGACGTCAGG+AGG + chr8_1:8286956-8286975 Msa1176270:CDS 55.0%
GAGATCAAGCAACGGTCGCA+CGG - chr8_1:8287734-8287753 None:intergenic 55.0%
TACTGACAAACTTGCCCCGG+AGG - chr8_1:8288284-8288303 None:intergenic 55.0%
AGACTCCGCGTTTCCGCATT+TGG + chr8_1:8289844-8289863 Msa1176270:three_prime_UTR 55.0%
GCAAGCCAAATGCGGAAACG+CGG - chr8_1:8289852-8289871 None:intergenic 55.0%
GCCGCATCAGGTCTTTCAGC+CGG + chr8_1:8285975-8285994 Msa1176270:CDS 60.0%
TTGGACGACGTCAGGAGGAG+AGG + chr8_1:8286961-8286980 Msa1176270:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 8284944 8290054 8284944 ID=Msa1176270;Name=Msa1176270
chr8_1 mRNA 8284944 8290054 8284944 ID=Msa1176270-mRNA-1;Parent=Msa1176270;Name=Msa1176270-mRNA-1;_AED=0.03;_eAED=0.03;_QI=442|1|1|1|0.75|0.6|5|484|1006
chr8_1 exon 8284944 8285153 8284944 ID=Msa1176270-mRNA-1:exon:2843;Parent=Msa1176270-mRNA-1
chr8_1 exon 8285371 8286832 8285371 ID=Msa1176270-mRNA-1:exon:2844;Parent=Msa1176270-mRNA-1
chr8_1 exon 8286912 8287215 8286912 ID=Msa1176270-mRNA-1:exon:2845;Parent=Msa1176270-mRNA-1
chr8_1 exon 8287518 8288005 8287518 ID=Msa1176270-mRNA-1:exon:2846;Parent=Msa1176270-mRNA-1
chr8_1 exon 8288572 8290054 8288572 ID=Msa1176270-mRNA-1:exon:2847;Parent=Msa1176270-mRNA-1
chr8_1 five_prime_UTR 8284944 8285153 8284944 ID=Msa1176270-mRNA-1:five_prime_utr;Parent=Msa1176270-mRNA-1
chr8_1 five_prime_UTR 8285371 8285602 8285371 ID=Msa1176270-mRNA-1:five_prime_utr;Parent=Msa1176270-mRNA-1
chr8_1 CDS 8285603 8286832 8285603 ID=Msa1176270-mRNA-1:cds;Parent=Msa1176270-mRNA-1
chr8_1 CDS 8286912 8287215 8286912 ID=Msa1176270-mRNA-1:cds;Parent=Msa1176270-mRNA-1
chr8_1 CDS 8287518 8288005 8287518 ID=Msa1176270-mRNA-1:cds;Parent=Msa1176270-mRNA-1
chr8_1 CDS 8288572 8289570 8288572 ID=Msa1176270-mRNA-1:cds;Parent=Msa1176270-mRNA-1
chr8_1 three_prime_UTR 8289571 8290054 8289571 ID=Msa1176270-mRNA-1:three_prime_utr;Parent=Msa1176270-mRNA-1
Gene Sequence

>Msa1176270

ATGATGGTTGCAGATTTTCTTAGTTCTGGTCCTACCTCAACTGCAATTTCTCAAATCATAGAAACTATTGGTGAGTTCCTATGCAGTGCTAATGATGTACTTGTGAATAAAGATAGTTTTAAGGAACTTAGTTCTTATTTGGAAAGAATTAAACCGATTTTGAAAGAATTGAGGAATGAAAAAGTGAGTGATTCTGAGGCATTCAACCGTGCCATTGATATTATGAATCGCGAAACGAAAGCTGCAAACCTACTTGCTCTGGAATGTCGTAAGAAGAGCAAGGTTTATTTGTTAATGAATTGTAGGTCGATTGTAAATCGGTTAGAAAGTCACACGAAGGAGATAAGCAAGGCGCTAGGTCTTCTTCCTTTAGCCGCATCAGGTCTTTCAGCCGGAATATTGGAAGAAATTAAAAAGGTTTGTGATAATATGGAGAAAGCTGGATTTAAGGCTGCGGTAGCGGAAGAAGAGATTTTAGAGAAAATCGAGTCAGGGATAAGGGAAAACAGTTTTGATCGTAAGCATGCAAATAATTTAATAAATCTCATTGCTAACGCTGTTGGAATTACAAATGAGAAGTCGACGATGAAGGCTGAACTTGAAGAGTTTAAGAAAGAAATTGAAAATGCTCGTGTTGATAAGAAAAAGGCTGAAGCTATGCAAATGGATCAAATCATTGCTTTGTTGGAAAGAGCTGATGCAGCCTCATCACCGAACGAAAGGAAACTGAAATACTTTGCGAAACGGCAATCTTTAGGTACTCGAATCTTGGAGCCTCTACAGTCATTTTATTGTCCTATCACACATGATGTTATGGTGGAACCTGTTGAAACTTCATCAGATCAAACATTTGAGAGAAGTGCAATAGAGAAGTGGTTTGAAGAAGGAAACAAGTTGTGTCCTTTGACGCTGATTCCTTTAGATACATCAGTTTTGAGACCTAACAAAACTTTGAAACAATCCATAGAAGAATGGAAAGATAGAAATACAATGATTACAATTGCTACTTTGAAAGAAAAAATACATCAGTTTGGAGATGATGATGAAGTGATAAGTTGTCTAAAAACTCTTGAGGATTTGTGTGAGCAGAGAGAGCAACACAGGGAATGGATGATACTTGAGGACTACATACAAGTTCTTATACAAATTCTTGGTTCGAGAAACCGTGACATAAGGAATCGAGCTCTTGTCATCCTTTGCATTCTAGCAAAAGATAATGAAGAAGCTAAGGAAAGAATTGTAACAGTTGATAATGCGATTGAATCAATCGTCCATTCTCTTGGACGACGTCAGGAGGAGAGGAAGTTAGCAGTTGCATTACTGCTTGAATTATCCAAATATGATTTGGCGCGAGAACACATTGGAAAAGTTCAAGGTTGCATACTTCTATTGGTGACTATGTCTAATGGTGATGACAATCAAGCTGCTAGAGATGCAACTGATGTATTGGATAATCTTTCATACTCTGATCAGAATGTTATACTGATGGCAAAGGCAAACTATTTCAAGCATTTACTGCAACGTCTCTCGACAGGAGCAGATGATGTAAAGATGATTATGGCCAATACATTAGCCGAAATGGAATTAACTGACCACAATAAGGAGTCCTTATTTGATGGTGGTGTACTTGCTCCTCTTCTTCACTTGTTCTTACATAATGATCTTCAGGTGAAAACAGTGGCCACAAAGGCTCTTAAGAATCTATCCAGTTTAAAGAGAAATGGACTTGAAATGATTCGACAAGGGGCCGTGCGACCGTTGCTTGATCTCCTTTATCATCATAGCATACACACATCAAGTTTATGGGAAGATGTAGCAGCCATAATTATGCAACTTGCTGCATCAACTATCTCTCAAGATGTCCAAACACCGGTTTTGTTACTAGATTCTGATGATGATGTTTTTAACCTTTTCCCTTTAATCAGTGTGACACAACCTGGTGTACAACAAAACATTATTCAGACCTTTTACGCCTTGTGTCAGTCACCTTCATCTTCAAATATCAAGACGAAGCTAAATGAGTGCTCAGCTATACCAGAATTGGTTAGGTTGTGTGAGAATGAGAATCTAAACCTAAGAGCAAGTGCTATAAAGTTGTTTTCATGCTTGGTAGAGAGTTGTGATGAATCCATCATAGTAGAGAATGTTGATCAGAAATGCATCAATAATTTACTTCAGATCCTACAATCCTCATCTGATGAAGAGGAAATACATTCTGCTATGGGAATAATATGCCATCTTCCAGAAATTGATCAGATAACTCAATGGATTCTAGATGCTGGCGTACTTCCAATCATTTATAAATATGTTCAAGACGGTAGAGACCGAGATCTTCAAAGGAGTAACTTAGTCGAGAAAGCAGTCGGTGCCTTACGTCGTTTTACAGTTCCAACACACTTGGAGTGGCAAAAAATTGTAGCTGAAACTGGTATTATAACTGTTTTAGTGCAGTTGCTTGAAATTGGATCAACCTTGACAAAACAACGTGCAGCGTTATGTCTCGCTGAATTTTCTAAAAGCTCGGTTAGTCTCAGCAGACCGATTCCGAAGCAAAAAGGACTACTATGTTGTTTCTCAGCTCCAAGTGAAATTGGCTGTAAAGTTCATGGAGGAGTATGCACTGTCAAGTCATCATTTTGTCTTTTGGCAGCTGAAGCAATTGGACCACTCACTAGAAATCTTGGAGAATCTGATTATGGAGTCTGTGAGGCTTCTTTGGATGCTTTATTAACATTGATTGAAGGTGAAAGACTAGAGAGTGGTGGTAAAGTGCTTGCAAAAGCAAATGCAATACCATTAATAATAAAATTTCTTAGTTCTACATCTCTTGGGTTGCAAGAAAAGTCTCTACATGCTTTGGAAAGGATTTTTCAGCTAGCAGAGTTCAAACAGTTGTATGGAGCCTCAGCTCAAATGCCTCTAGTTGACTTAACTCAGAGGAGTAATGGTAGAGTTAGATCCATGTCAGCTAGAGTATTGGCTCATTTGAATGTTCTTCATGATCAGTCTTCATACTTTTAA
Protein sequence

>Msa1176270

MMVADFLSSGPTSTAISQIIETIGEFLCSANDVLVNKDSFKELSSYLERIKPILKELRNEKVSDSEAFNRAIDIMNRETKAANLLALECRKKSKVYLLMNCRSIVNRLESHTKEISKALGLLPLAASGLSAGILEEIKKVCDNMEKAGFKAAVAEEEILEKIESGIRENSFDRKHANNLINLIANAVGITNEKSTMKAELEEFKKEIENARVDKKKAEAMQMDQIIALLERADAASSPNERKLKYFAKRQSLGTRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFEEGNKLCPLTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIHQFGDDDEVISCLKTLEDLCEQREQHREWMILEDYIQVLIQILGSRNRDIRNRALVILCILAKDNEEAKERIVTVDNAIESIVHSLGRRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATDVLDNLSYSDQNVILMAKANYFKHLLQRLSTGADDVKMIMANTLAEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALKNLSSLKRNGLEMIRQGAVRPLLDLLYHHSIHTSSLWEDVAAIIMQLAASTISQDVQTPVLLLDSDDDVFNLFPLISVTQPGVQQNIIQTFYALCQSPSSSNIKTKLNECSAIPELVRLCENENLNLRASAIKLFSCLVESCDESIIVENVDQKCINNLLQILQSSSDEEEIHSAMGIICHLPEIDQITQWILDAGVLPIIYKYVQDGRDRDLQRSNLVEKAVGALRRFTVPTHLEWQKIVAETGIITVLVQLLEIGSTLTKQRAALCLAEFSKSSVSLSRPIPKQKGLLCCFSAPSEIGCKVHGGVCTVKSSFCLLAAEAIGPLTRNLGESDYGVCEASLDALLTLIEGERLESGGKVLAKANAIPLIIKFLSSTSLGLQEKSLHALERIFQLAEFKQLYGASAQMPLVDLTQRSNGRVRSMSARVLAHLNVLHDQSSYF*