Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317000 | A0A072TYP6 | 81.543 | 363 | 3 | 2 | 1 | 299 | 1 | 363 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1177210 | Msa1317000 | 0.869588 | 2.766417e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317000 | MtrunA17_Chr8g0347131 | 81.543 | 363 | 3 | 2 | 1 | 299 | 1 | 363 | 0.0 | 549 |
| Msa1317000 | MtrunA17_Chr1g0171941 | 61.739 | 115 | 41 | 2 | 43 | 155 | 2 | 115 | 1.05e-39 | 140 |
| Msa1317000 | MtrunA17_Chr7g0256541 | 51.613 | 93 | 44 | 1 | 66 | 158 | 1 | 92 | 1.54e-22 | 96.7 |
| Msa1317000 | MtrunA17_Chr8g0368511 | 50.000 | 54 | 27 | 0 | 55 | 108 | 50 | 103 | 7.44e-13 | 63.9 |
| Msa1317000 | MtrunA17_Chr7g0222601 | 48.148 | 54 | 28 | 0 | 55 | 108 | 16 | 69 | 2.88e-12 | 62.0 |
| Msa1317000 | MtrunA17_Chr1g0212831 | 42.857 | 63 | 36 | 0 | 55 | 117 | 11 | 73 | 5.34e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317000 | AT3G61700.1 | 59.229 | 363 | 78 | 8 | 1 | 297 | 1 | 359 | 9.41e-134 | 384 |
| Msa1317000 | AT3G61700.3 | 59.229 | 363 | 78 | 8 | 1 | 297 | 1 | 359 | 9.41e-134 | 384 |
| Msa1317000 | AT3G61700.2 | 58.424 | 368 | 78 | 8 | 1 | 297 | 1 | 364 | 2.20e-133 | 383 |
| Msa1317000 | AT2G46420.3 | 56.831 | 366 | 81 | 6 | 4 | 296 | 1 | 362 | 3.44e-132 | 380 |
| Msa1317000 | AT2G46420.1 | 56.831 | 366 | 81 | 6 | 4 | 296 | 1 | 362 | 3.44e-132 | 380 |
| Msa1317000 | AT3G61700.4 | 59.104 | 357 | 76 | 8 | 7 | 297 | 5 | 357 | 2.24e-131 | 377 |
| Msa1317000 | AT2G46420.2 | 56.522 | 345 | 76 | 4 | 4 | 277 | 1 | 342 | 6.58e-125 | 360 |
| Msa1317000 | AT3G10250.3 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.01e-43 | 151 |
| Msa1317000 | AT3G10250.2 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1317000 | AT3G10250.5 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1317000 | AT3G10250.1 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1317000 | AT3G10250.4 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1317000 | AT5G04090.6 | 53.906 | 128 | 59 | 0 | 34 | 161 | 10 | 137 | 3.12e-39 | 140 |
| Msa1317000 | AT5G04090.2 | 57.895 | 114 | 48 | 0 | 48 | 161 | 7 | 120 | 3.51e-39 | 140 |
| Msa1317000 | AT5G04090.4 | 52.174 | 92 | 44 | 0 | 70 | 161 | 1 | 92 | 5.85e-24 | 99.0 |
| Msa1317000 | AT5G04090.7 | 52.174 | 92 | 44 | 0 | 70 | 161 | 1 | 92 | 5.85e-24 | 99.0 |
| Msa1317000 | AT3G55240.1 | 40.000 | 85 | 39 | 1 | 34 | 118 | 1 | 73 | 7.80e-14 | 66.6 |
| Msa1317000 | AT2G29605.1 | 37.079 | 89 | 55 | 1 | 44 | 132 | 12 | 99 | 1.44e-12 | 67.8 |
| Msa1317000 | AT5G04090.3 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
| Msa1317000 | AT5G04090.5 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
| Msa1317000 | AT5G04090.1 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
Find 117 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGATATATCTATTATT+AGG | 0.161419 | 8_4:-17982034 | Msa1317000:three_prime_UTR |
| CTTTGAGGGGTTGCAGATTC+AGG | 0.199940 | 8_4:-17989453 | Msa1317000:five_prime_UTR |
| TTAGGTTAGGGAGAAAATTT+AGG | 0.243691 | 8_4:-17982208 | Msa1317000:three_prime_UTR |
| CTTGTTGCACATTAATTCTT+AGG | 0.275223 | 8_4:-17982226 | Msa1317000:three_prime_UTR |
| TGTAATTCATTTGATGCATT+TGG | 0.283357 | 8_4:-17981987 | Msa1317000:three_prime_UTR |
| AGATGAAATTTATTCATATA+CGG | 0.288921 | 8_4:-17988541 | Msa1317000:five_prime_UTR |
| GGCACCTTTCTATTAAATTC+TGG | 0.297711 | 8_4:+17986561 | None:intergenic |
| TTGAGATATATCTATTATTA+GGG | 0.298619 | 8_4:-17982033 | Msa1317000:three_prime_UTR |
| TTCAAGCAATGATAGCAAAA+AGG | 0.331651 | 8_4:-17986749 | Msa1317000:CDS |
| CTTTATTCATATATAATTGC+AGG | 0.333218 | 8_4:+17986540 | None:intergenic |
| CTTTCCTCCCCTTAAGTTGA+AGG | 0.350001 | 8_4:+17982252 | None:intergenic |
| ATTGTTTGGATGTTCACTCT+TGG | 0.355224 | 8_4:+17986816 | None:intergenic |
| ACAGAGAGAACAAGTGTTGC+TGG | 0.358265 | 8_4:+17989767 | None:intergenic |
| AACTGAAATGAAGAACTTGC+AGG | 0.359277 | 8_4:-17988425 | Msa1317000:intron |
| TGCACATTAATTCTTAGGTT+AGG | 0.360279 | 8_4:-17982221 | Msa1317000:three_prime_UTR |
| GCATCAGTTGTGTGATTGTT+TGG | 0.373031 | 8_4:+17986802 | None:intergenic |
| GGGGTTGCAGATTCAGGAAC+TGG | 0.376334 | 8_4:-17989447 | Msa1317000:five_prime_UTR |
| TTGTTTGGATGTTCACTCTT+GGG | 0.381138 | 8_4:+17986817 | None:intergenic |
| GCACATTAATTCTTAGGTTA+GGG | 0.384750 | 8_4:-17982220 | Msa1317000:three_prime_UTR |
| GGACCACAGTGCTCCTGATA+TGG | 0.385772 | 8_4:-17984304 | Msa1317000:CDS |
| GAGGAGAAACCTTCAACTTA+AGG | 0.399945 | 8_4:-17982261 | Msa1317000:exon |
| GGAATCATTGGAGCCATATC+AGG | 0.405214 | 8_4:+17984291 | None:intergenic |
| ATTGGAGCCAATGGAACCTT+TGG | 0.405471 | 8_4:+17985779 | None:intergenic |
| TTCACTGCATCGGAAATATC+AGG | 0.412044 | 8_4:-17984192 | Msa1317000:CDS |
| CTACCTATATCCTGTTGATC+TGG | 0.413318 | 8_4:+17983261 | None:intergenic |
| GCTTGAATCTCCAGATCAAC+AGG | 0.418289 | 8_4:-17983271 | Msa1317000:CDS |
| TGGTTAAAACTCTACTGAAT+CGG | 0.422829 | 8_4:-17986511 | Msa1317000:CDS |
| TCTCCAGATCAACAGGATAT+AGG | 0.424911 | 8_4:-17983264 | Msa1317000:intron |
| AAATAGAGAAGAGTAAGAAA+TGG | 0.437832 | 8_4:+17989598 | None:intergenic |
| AGCCGCAGGTCAGCCTCATA+TGG | 0.443308 | 8_4:-17985028 | Msa1317000:CDS |
| TAAATTTATATATTGTTGCT+TGG | 0.443412 | 8_4:-17981957 | Msa1317000:three_prime_UTR |
| AATAGAGAAGAGTAAGAAAT+GGG | 0.443742 | 8_4:+17989599 | None:intergenic |
| ATCTAGCTTACTTGGCATGC+AGG | 0.445337 | 8_4:-17982169 | Msa1317000:three_prime_UTR |
| GCCACCGATGTTGGACTCAC+TGG | 0.445851 | 8_4:+17984234 | None:intergenic |
| TTGAGTTCAGTGGAAGTTAG+TGG | 0.445991 | 8_4:-17988489 | Msa1317000:five_prime_UTR |
| TGCAGTTAACAATCTACCTA+TGG | 0.446046 | 8_4:-17985082 | Msa1317000:intron |
| CATACCAAGAGCTGTAAATC+CGG | 0.451036 | 8_4:+17986475 | None:intergenic |
| AGAACAAGTGTTGCTGGGAG+TGG | 0.452357 | 8_4:+17989773 | None:intergenic |
| GATCCCGGATTTACAGCTCT+TGG | 0.457556 | 8_4:-17986479 | Msa1317000:intron |
| TCTTCATTTCAGTTGAAAGA+AGG | 0.458910 | 8_4:+17988434 | None:intergenic |
| TTTGCAGATCTTGGAGCTCT+AGG | 0.459587 | 8_4:-17983339 | Msa1317000:intron |
| AGATCTTCAAATGAAAGAAA+TGG | 0.467424 | 8_4:+17989834 | None:intergenic |
| TTTACCTTGAACTTCTTCGT+GGG | 0.467856 | 8_4:-17989529 | Msa1317000:five_prime_UTR |
| TCCTCATCTGATTGAGAGCA+TGG | 0.469797 | 8_4:+17982279 | None:intergenic |
| GCTGAGCCTGAGTCTGCAAC+AGG | 0.471905 | 8_4:+17986778 | None:intergenic |
| ATGTCATCATCTAGCTTACT+TGG | 0.475503 | 8_4:-17982177 | Msa1317000:three_prime_UTR |
| AGGAGAAACCTTCAACTTAA+GGG | 0.477107 | 8_4:-17982260 | Msa1317000:exon |
| GGAGCCAATGGAACCTTTGG+AGG | 0.481798 | 8_4:+17985782 | None:intergenic |
| CCACTCGATGCCACCGATGT+TGG | 0.483016 | 8_4:+17984225 | None:intergenic |
| CTTTACCTTGAACTTCTTCG+TGG | 0.483373 | 8_4:-17989530 | Msa1317000:five_prime_UTR |
| GAGAGGTGAAGACAGTGCTT+AGG | 0.483895 | 8_4:-17982011 | Msa1317000:three_prime_UTR |
| GGTTAAAACTCTACTGAATC+GGG | 0.484157 | 8_4:-17986510 | Msa1317000:CDS |
| GGGTGGATTCCATTCTGTAT+TGG | 0.484433 | 8_4:+17985761 | None:intergenic |
| CCATTCTGTATTGGAGCCAA+TGG | 0.484477 | 8_4:+17985770 | None:intergenic |
| ATATGAGGCTGACCTGCGGC+TGG | 0.488258 | 8_4:+17985030 | None:intergenic |
| TGGAGCTCTAGGAAACTATC+CGG | 0.489098 | 8_4:-17983328 | Msa1317000:CDS |
| ATAGGATGCTGCTGTAGTAC+TGG | 0.491737 | 8_4:+17985054 | None:intergenic |
| TCATTTCCCTTTCACTGCAT+CGG | 0.494611 | 8_4:-17984202 | Msa1317000:CDS |
| CAATGGAACCTTTGGAGGCA+TGG | 0.494839 | 8_4:+17985787 | None:intergenic |
| ATTCATATACGGCGGTGTGC+TGG | 0.499938 | 8_4:-17988530 | Msa1317000:five_prime_UTR |
| CATGCCTCCAAAGGTTCCAT+TGG | 0.502362 | 8_4:-17985786 | Msa1317000:CDS |
| AGGTCCAGAATTTAATAGAA+AGG | 0.502568 | 8_4:-17986565 | Msa1317000:CDS |
| CAGCATCCTATGCCAGCCGC+AGG | 0.510852 | 8_4:-17985042 | Msa1317000:CDS |
| AAATGAAAGAAATGGTATAG+AGG | 0.511731 | 8_4:+17989842 | None:intergenic |
| TCAGCCTCATATGGACTCCA+TGG | 0.515218 | 8_4:-17985019 | Msa1317000:CDS |
| AAACCCCACGAAGAAGTTCA+AGG | 0.515673 | 8_4:+17989525 | None:intergenic |
| GAAGAAGTTCAAGGTAAAGT+AGG | 0.517590 | 8_4:+17989534 | None:intergenic |
| AATGGAATCCACCCTATGCC+TGG | 0.520904 | 8_4:-17985752 | Msa1317000:intron |
| GCATCGGAAATATCAGGAAT+GGG | 0.521866 | 8_4:-17984186 | Msa1317000:CDS |
| TGCATCGGAAATATCAGGAA+TGG | 0.524609 | 8_4:-17984187 | Msa1317000:CDS |
| AATGGAACCTTTGGAGGCAT+GGG | 0.531912 | 8_4:+17985788 | None:intergenic |
| GGTTTATTGAAGCATGGTGA+TGG | 0.538713 | 8_4:-17984325 | Msa1317000:intron |
| GAACAAGTGTTGCTGGGAGT+GGG | 0.539403 | 8_4:+17989774 | None:intergenic |
| ATATATTATATAATAAGATA+AGG | 0.541725 | 8_4:+17982120 | None:intergenic |
| AATATATTTCATTATTACTG+TGG | 0.546740 | 8_4:-17982104 | Msa1317000:three_prime_UTR |
| GATGCTCCTGTTGCAGACTC+AGG | 0.552659 | 8_4:-17986784 | Msa1317000:CDS |
| GGCTGACCTGCGGCTGGCAT+AGG | 0.554669 | 8_4:+17985036 | None:intergenic |
| GATATTTCCGATGCAGTGAA+AGG | 0.556620 | 8_4:+17984195 | None:intergenic |
| CAGAGAGAACAAGTGTTGCT+GGG | 0.559496 | 8_4:+17989768 | None:intergenic |
| ATATTTCCGATGCAGTGAAA+GGG | 0.562015 | 8_4:+17984196 | None:intergenic |
| ATATATGAATAAAGATGAAG+TGG | 0.563348 | 8_4:-17986531 | Msa1317000:CDS |
| GTAAGAATTTACCAGGCATA+GGG | 0.565431 | 8_4:+17985741 | None:intergenic |
| TTCAGCATTTAATTCTGATG+TGG | 0.577584 | 8_4:-17984142 | Msa1317000:CDS |
| GGTAAGAATTTACCAGGCAT+AGG | 0.578613 | 8_4:+17985740 | None:intergenic |
| GCAGTTAACAATCTACCTAT+GGG | 0.581803 | 8_4:-17985081 | Msa1317000:intron |
| AATCGGGCAAAGATAGATCC+CGG | 0.583846 | 8_4:-17986494 | Msa1317000:CDS |
| CCATTGGCTCCAATACAGAA+TGG | 0.587395 | 8_4:-17985770 | Msa1317000:CDS |
| ATGCCCATGGAGTCCATATG+AGG | 0.589725 | 8_4:+17985015 | None:intergenic |
| ATACCAAGAGCTGTAAATCC+GGG | 0.591106 | 8_4:+17986476 | None:intergenic |
| AGAATTTACCAGGCATAGGG+TGG | 0.592466 | 8_4:+17985744 | None:intergenic |
| GCGAACAATCTTGAGTTCAG+TGG | 0.593438 | 8_4:-17988499 | Msa1317000:five_prime_UTR |
| GCTCCAATGATTCCACAAAA+CGG | 0.598722 | 8_4:-17984282 | Msa1317000:CDS |
| CTATACTGTAACCGAAGTGT+AGG | 0.601952 | 8_4:-17982146 | Msa1317000:three_prime_UTR |
| ACTCACTGGCATTTCTGAGA+CGG | 0.603360 | 8_4:+17984248 | None:intergenic |
| AGCAACATGTCTGAATCAGA+TGG | 0.604874 | 8_4:+17983291 | None:intergenic |
| ATATATCTATTATTAGGGAG+AGG | 0.605655 | 8_4:-17982028 | Msa1317000:three_prime_UTR |
| CAGCCTCATATGGACTCCAT+GGG | 0.606700 | 8_4:-17985018 | Msa1317000:CDS |
| GAAGTGTCCCATGCCTCCAA+AGG | 0.607338 | 8_4:-17985795 | Msa1317000:CDS |
| ATTCAGGAACTGGGTGTGTG+AGG | 0.609632 | 8_4:-17989437 | Msa1317000:intron |
| GCCAGTGAGTCCAACATCGG+TGG | 0.616717 | 8_4:-17984235 | Msa1317000:CDS |
| TGTAGTACTGGATATCCCAT+AGG | 0.618753 | 8_4:+17985066 | None:intergenic |
| AGTGTGGCAAAAGTTAGAAG+AGG | 0.618952 | 8_4:-17985915 | Msa1317000:CDS |
| GGAGAAACCTTCAACTTAAG+GGG | 0.620998 | 8_4:-17982259 | Msa1317000:exon |
| TCCATGCTCTCAATCAGATG+AGG | 0.630730 | 8_4:-17982280 | Msa1317000:CDS |
| GGGTTGCAGATTCAGGAACT+GGG | 0.631433 | 8_4:-17989446 | Msa1317000:five_prime_UTR |
| GGAGCTCTAGGAAACTATCC+GGG | 0.632052 | 8_4:-17983327 | Msa1317000:CDS |
| TTACCTTGAACTTCTTCGTG+GGG | 0.632734 | 8_4:-17989528 | Msa1317000:five_prime_UTR |
| AGATAAGGCTGCCTACACTT+CGG | 0.633196 | 8_4:+17982135 | None:intergenic |
| ATGACAACTTGACATGCCCA+TGG | 0.641314 | 8_4:+17985002 | None:intergenic |
| CCAACATCGGTGGCATCGAG+TGG | 0.649411 | 8_4:-17984225 | Msa1317000:CDS |
| GAAACCTTCAACTTAAGGGG+AGG | 0.654911 | 8_4:-17982256 | Msa1317000:exon |
| TGAAATTTATTCATATACGG+CGG | 0.674185 | 8_4:-17988538 | Msa1317000:five_prime_UTR |
| TAATGAGAATAGTAGCAATG+AGG | 0.675559 | 8_4:+17989654 | None:intergenic |
| AATGCCAGTGAGTCCAACAT+CGG | 0.681951 | 8_4:-17984238 | Msa1317000:CDS |
| TCATCTGATTGAGAGCATGG+AGG | 0.698983 | 8_4:+17982282 | None:intergenic |
| GTCCATATGAGGCTGACCTG+CGG | 0.704335 | 8_4:+17985026 | None:intergenic |
| GAGCCATATCAGGAGCACTG+TGG | 0.761103 | 8_4:+17984301 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAATTAAACTATTATTA+TGG | - | chr8_4:17982776-17982795 | Msa1317000:intron | 10.0% |
| !! | AATGTACAATTTATTATATA+TGG | - | chr8_4:17983034-17983053 | Msa1317000:intron | 10.0% |
| !!! | ATATATGGAAAAAATAATTT+TGG | - | chr8_4:17983049-17983068 | Msa1317000:intron | 10.0% |
| !! | AAAAAATAAAAAATACCTTT+CGG | - | chr8_4:17986571-17986590 | Msa1317000:intron | 10.0% |
| !! | TTATCAAGTAAAATTAATAA+AGG | + | chr8_4:17989205-17989224 | None:intergenic | 10.0% |
| !!! | TATTTTGTTATTTCTTTTAA+AGG | + | chr8_4:17989305-17989324 | None:intergenic | 10.0% |
| !! | AGAAATAACAAAATAAAATA+TGG | - | chr8_4:17989310-17989329 | Msa1317000:intron | 10.0% |
| !!! | TTTTTTTACCCTTTTTTAAA+TGG | - | chr8_4:17982738-17982757 | Msa1317000:intron | 15.0% |
| !!! | TTTTCTAACCATTTAAAAAA+GGG | + | chr8_4:17982749-17982768 | None:intergenic | 15.0% |
| !!! | TTTTTCTAACCATTTAAAAA+AGG | + | chr8_4:17982750-17982769 | None:intergenic | 15.0% |
| !! | AGATGAAATTTATTCATATA+CGG | - | chr8_4:17983237-17983256 | Msa1317000:intron | 15.0% |
| !! | ATTATTAAAGAAAATTGCAA+GGG | + | chr8_4:17983780-17983799 | None:intergenic | 15.0% |
| !! | AATTATTAAAGAAAATTGCA+AGG | + | chr8_4:17983781-17983800 | None:intergenic | 15.0% |
| !!! | ATTTCAAGATATTTTGAAAA+TGG | - | chr8_4:17983819-17983838 | Msa1317000:intron | 15.0% |
| !!! | TATTTAATGCTTTGAAAAAT+TGG | - | chr8_4:17984262-17984281 | Msa1317000:CDS | 15.0% |
| !!! | TTTAGAATGCAAAATATAAA+TGG | + | chr8_4:17985350-17985369 | None:intergenic | 15.0% |
| !!! | AAGTTTGTATTCATTTTTAA+AGG | + | chr8_4:17985805-17985824 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAGATTTAT+TGG | + | chr8_4:17987156-17987175 | None:intergenic | 15.0% |
| !!! | TCAAAAGATACAAAATATTT+TGG | - | chr8_4:17988208-17988227 | Msa1317000:intron | 15.0% |
| !!! | TATCAATTTCAAGTAAATAA+TGG | - | chr8_4:17988277-17988296 | Msa1317000:intron | 15.0% |
| !! | CATCAAAGTAATTAAAATTT+AGG | + | chr8_4:17988576-17988595 | None:intergenic | 15.0% |
| !! | TGAAAATTTCCTAAAAATAT+AGG | - | chr8_4:17989177-17989196 | Msa1317000:intron | 15.0% |
| !! | AGAATATGAAGAATATATTA+AGG | + | chr8_4:17989413-17989432 | None:intergenic | 15.0% |
| !! | AATATATTTCATTATTACTG+TGG | - | chr8_4:17989674-17989693 | Msa1317000:five_prime_UTR | 15.0% |
| !!! | TTTGAGATATATCTATTATT+AGG | - | chr8_4:17989744-17989763 | Msa1317000:five_prime_UTR | 15.0% |
| !! | TTGAGATATATCTATTATTA+GGG | - | chr8_4:17989745-17989764 | Msa1317000:five_prime_UTR | 15.0% |
| !! | TAAATTTATATATTGTTGCT+TGG | - | chr8_4:17989821-17989840 | Msa1317000:five_prime_UTR | 15.0% |
| !!! | ATTTTATATAACTTCTAGTT+AGG | - | chr8_4:17989863-17989882 | Msa1317000:five_prime_UTR | 15.0% |
| !! | TTGAAAAAGATTGAAAGTTT+GGG | + | chr8_4:17982208-17982227 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCTTTTTTCTTTG+AGG | - | chr8_4:17982310-17982329 | Msa1317000:CDS | 20.0% |
| !!! | TTTTTTGCTTTTTTCTTTGA+GGG | - | chr8_4:17982311-17982330 | Msa1317000:CDS | 20.0% |
| !!! | TTTTTTACTTGAGATTCAAA+AGG | - | chr8_4:17982620-17982639 | Msa1317000:intron | 20.0% |
| !!! | TTTTGTTTATTTGGTTTCAA+TGG | - | chr8_4:17982647-17982666 | Msa1317000:intron | 20.0% |
| !!! | ATTTTTTCTTTTGTTGTTTG+AGG | - | chr8_4:17982685-17982704 | Msa1317000:intron | 20.0% |
| !!! | TTTTTTCTTTTGTTGTTTGA+GGG | - | chr8_4:17982686-17982705 | Msa1317000:intron | 20.0% |
| !! | AAAGTTCATGTTAAAAATTG+TGG | - | chr8_4:17982844-17982863 | Msa1317000:intron | 20.0% |
| !! | TGAATGAAAAAAATAGCTAT+TGG | - | chr8_4:17982908-17982927 | Msa1317000:intron | 20.0% |
| !!! | TTCATTTTCTTTATCATATG+AGG | - | chr8_4:17983123-17983142 | Msa1317000:intron | 20.0% |
| !!! | ACTCTTTCGATAATTTTTAA+CGG | - | chr8_4:17983166-17983185 | Msa1317000:intron | 20.0% |
| !! | CATTTCTATTATTAGTATTG+AGG | + | chr8_4:17983394-17983413 | None:intergenic | 20.0% |
| !! | TATTGTTCCTTTAAATATCT+AGG | - | chr8_4:17983419-17983438 | Msa1317000:intron | 20.0% |
| !!! | ACAAACTTTTAATGACAAAT+TGG | + | chr8_4:17983611-17983630 | None:intergenic | 20.0% |
| !! | TTGAAGTGAAAATGAAAATA+AGG | + | chr8_4:17983723-17983742 | None:intergenic | 20.0% |
| !!! | AAATAAACATAAAAGCACAT+AGG | - | chr8_4:17983744-17983763 | Msa1317000:intron | 20.0% |
| !!! | CTAACAAAGTACTATAATTA+CGG | + | chr8_4:17984093-17984112 | None:intergenic | 20.0% |
| !!! | GAACTAAATATACCTTTTTA+TGG | - | chr8_4:17984888-17984907 | Msa1317000:intron | 20.0% |
| !!! | AGTTTTTGGAATAAATCAAA+GGG | + | chr8_4:17985188-17985207 | None:intergenic | 20.0% |
| !!! | AAGTTTTTGGAATAAATCAA+AGG | + | chr8_4:17985189-17985208 | None:intergenic | 20.0% |
| !!! | TTTATTCCAAAAACTTTTGT+AGG | - | chr8_4:17985193-17985212 | Msa1317000:intron | 20.0% |
| !! | CTTTATTCATATATAATTGC+AGG | + | chr8_4:17985241-17985260 | None:intergenic | 20.0% |
| !! | ATATATGAATAAAGATGAAG+TGG | - | chr8_4:17985247-17985266 | Msa1317000:intron | 20.0% |
| !! | TGAAAAACTAGTATACATTT+AGG | - | chr8_4:17985410-17985429 | Msa1317000:intron | 20.0% |
| !!! | AAATTCTTTAGAAGAATCTA+TGG | + | chr8_4:17985597-17985616 | None:intergenic | 20.0% |
| !! | ACATAACATATATAACCATT+AGG | + | chr8_4:17986192-17986211 | None:intergenic | 20.0% |
| !! | AGTTCACTTTAATATAATCA+AGG | + | chr8_4:17986322-17986341 | None:intergenic | 20.0% |
| !!! | CATGATAGTTTTTAGAATTT+AGG | + | chr8_4:17986354-17986373 | None:intergenic | 20.0% |
| !!! | TATAGATTTTTCCAAATCTT+TGG | - | chr8_4:17986407-17986426 | Msa1317000:intron | 20.0% |
| !! | TAATAAGAACAATCTTGTAA+TGG | + | chr8_4:17986477-17986496 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAAAGACTGCATA+AGG | + | chr8_4:17986551-17986570 | None:intergenic | 20.0% |
| !! | AATGCATACAAATTAAATTC+TGG | - | chr8_4:17986970-17986989 | Msa1317000:intron | 20.0% |
| !! | TGACAATTAAAAATGAATAG+AGG | - | chr8_4:17987338-17987357 | Msa1317000:intron | 20.0% |
| !! | GACAATTAAAAATGAATAGA+GGG | - | chr8_4:17987339-17987358 | Msa1317000:intron | 20.0% |
| !! | TCTCAAATATAAGCAAAAAA+TGG | - | chr8_4:17987866-17987885 | Msa1317000:intron | 20.0% |
| !! | AAACAAAATGTTGATGTATT+TGG | + | chr8_4:17987928-17987947 | None:intergenic | 20.0% |
| !!! | AGTAATTAAAATTTAGGACA+TGG | + | chr8_4:17988570-17988589 | None:intergenic | 20.0% |
| !!! | ATAAAGGTTCCTATATTTTT+AGG | + | chr8_4:17989189-17989208 | None:intergenic | 20.0% |
| ! | GTTGAAAAATCTAGCAAAAT+GGG | + | chr8_4:17981909-17981928 | None:intergenic | 25.0% |
| ! | TGTTGAAAAATCTAGCAAAA+TGG | + | chr8_4:17981910-17981929 | None:intergenic | 25.0% |
| ! | AAATGAAAGAAATGGTATAG+AGG | + | chr8_4:17981939-17981958 | None:intergenic | 25.0% |
| ! | AGATCTTCAAATGAAAGAAA+TGG | + | chr8_4:17981947-17981966 | None:intergenic | 25.0% |
| !!! | GGAGAGATATTTTTTGAAAA+GGG | + | chr8_4:17982061-17982080 | None:intergenic | 25.0% |
| ! | AATAGAGAAGAGTAAGAAAT+GGG | + | chr8_4:17982182-17982201 | None:intergenic | 25.0% |
| ! | AAATAGAGAAGAGTAAGAAA+TGG | + | chr8_4:17982183-17982202 | None:intergenic | 25.0% |
| ! | TGAAAAAGATTGAAAGTTTG+GGG | + | chr8_4:17982207-17982226 | None:intergenic | 25.0% |
| ! | CTTGAAAAAGATTGAAAGTT+TGG | + | chr8_4:17982209-17982228 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTTTTTCTTTGAG+GGG | - | chr8_4:17982312-17982331 | Msa1317000:intron | 25.0% |
| !! | AGATCTTAAAGTTCCATTTT+TGG | - | chr8_4:17982387-17982406 | Msa1317000:intron | 25.0% |
| !! | TAAAAAGTTTGTTCCTTTGA+AGG | - | chr8_4:17982471-17982490 | Msa1317000:intron | 25.0% |
| ! | CAAACAAAAATTTCCTTCAA+AGG | + | chr8_4:17982487-17982506 | None:intergenic | 25.0% |
| !!! | CTTTGAAGGAAATTTTTGTT+TGG | - | chr8_4:17982485-17982504 | Msa1317000:intron | 25.0% |
| !!! | AAAGGCTTGTTTTGTTTATT+TGG | - | chr8_4:17982638-17982657 | Msa1317000:intron | 25.0% |
| !!! | TTTTTCTTTTGTTGTTTGAG+GGG | - | chr8_4:17982687-17982706 | Msa1317000:intron | 25.0% |
| ! | AAAAAATAGCTATTGGAATG+TGG | - | chr8_4:17982915-17982934 | Msa1317000:intron | 25.0% |
| ! | TGCTCATATTTACTTTAGTA+TGG | - | chr8_4:17982973-17982992 | Msa1317000:intron | 25.0% |
| !! | ATTTTTAACGGTTATTGAAG+CGG | - | chr8_4:17983178-17983197 | Msa1317000:intron | 25.0% |
| ! | GAATAAATTTCATCTGTAAC+AGG | + | chr8_4:17983232-17983251 | None:intergenic | 25.0% |
| ! | TGAAATTTATTCATATACGG+CGG | - | chr8_4:17983240-17983259 | Msa1317000:intron | 25.0% |
| !! | TTAGTATTGAGGTGTATTAT+GGG | + | chr8_4:17983383-17983402 | None:intergenic | 25.0% |
| !! | ATTAGTATTGAGGTGTATTA+TGG | + | chr8_4:17983384-17983403 | None:intergenic | 25.0% |
| ! | AATAAAGATGACTTCATATG+TGG | + | chr8_4:17983572-17983591 | None:intergenic | 25.0% |
| !! | TTCATTTTAAATTGCTAGCA+AGG | + | chr8_4:17983939-17983958 | None:intergenic | 25.0% |
| ! | AAGTTGTTAATTTCGTTGTT+TGG | - | chr8_4:17984060-17984079 | Msa1317000:intron | 25.0% |
| ! | AGTTGTTAATTTCGTTGTTT+GGG | - | chr8_4:17984061-17984080 | Msa1317000:intron | 25.0% |
| !! | TGTTAGCATAATGAATTTTC+CGG | - | chr8_4:17984107-17984126 | Msa1317000:intron | 25.0% |
| ! | GCATTAAATACGTACAAATT+AGG | + | chr8_4:17984252-17984271 | None:intergenic | 25.0% |
| !! | TGTTGAAGGGAAAATTTTAT+TGG | - | chr8_4:17984333-17984352 | Msa1317000:intron | 25.0% |
| !!! | CAATTAATTTGTTTTCGTGT+TGG | + | chr8_4:17984412-17984431 | None:intergenic | 25.0% |
| ! | AAAACAAATTAATTGCAGCA+TGG | - | chr8_4:17984417-17984436 | Msa1317000:intron | 25.0% |
| !! | GTTGACAATGTTTTCAATAT+TGG | - | chr8_4:17984768-17984787 | Msa1317000:intron | 25.0% |
| ! | TGTTCTACAAATCCATAAAA+AGG | + | chr8_4:17984903-17984922 | None:intergenic | 25.0% |
| ! | TTATTTAATCCACAAGACAA+AGG | + | chr8_4:17985148-17985167 | None:intergenic | 25.0% |
| !! | TGATGTTTAAGTTTATCTAC+TGG | + | chr8_4:17985634-17985653 | None:intergenic | 25.0% |
| !! | TTATCCATAAATTGGTAACA+TGG | - | chr8_4:17985704-17985723 | Msa1317000:intron | 25.0% |
| ! | ATTTCCATGTTACCAATTTA+TGG | + | chr8_4:17985711-17985730 | None:intergenic | 25.0% |
| ! | AATTACATTACAAGAATGCA+TGG | + | chr8_4:17985781-17985800 | None:intergenic | 25.0% |
| !! | ATGCTTTTATTAATTCAGTG+TGG | - | chr8_4:17985847-17985866 | Msa1317000:CDS | 25.0% |
| !!! | CAATTTTAGTCTAACATAGT+AGG | + | chr8_4:17985910-17985929 | None:intergenic | 25.0% |
| ! | ATTGCAATATCATGTGTTAT+TGG | + | chr8_4:17986289-17986308 | None:intergenic | 25.0% |
| !! | ATTATATTTGGAGTGAAGTT+AGG | + | chr8_4:17986386-17986405 | None:intergenic | 25.0% |
| ! | GATTGTTCTTATTATGATAG+TGG | - | chr8_4:17986483-17986502 | Msa1317000:CDS | 25.0% |
| ! | AGGAATATGAAGAAAAGATA+AGG | + | chr8_4:17986646-17986665 | None:intergenic | 25.0% |
| !! | CAAATGGTGTTAAAGAATAA+TGG | + | chr8_4:17986669-17986688 | None:intergenic | 25.0% |
| ! | ATATCATGGTATGATTTGAT+TGG | + | chr8_4:17986878-17986897 | None:intergenic | 25.0% |
| ! | CATTGTCATATAGATATTTG+TGG | + | chr8_4:17986915-17986934 | None:intergenic | 25.0% |
| ! | TATCTATATGACAATGTGAA+TGG | - | chr8_4:17986919-17986938 | Msa1317000:intron | 25.0% |
| !!! | TCCTTTTTAGTTGTCATTTT+AGG | - | chr8_4:17987107-17987126 | Msa1317000:intron | 25.0% |
| ! | TCCTAAAATGACAACTAAAA+AGG | + | chr8_4:17987111-17987130 | None:intergenic | 25.0% |
| !! | ATAAGATTTATTGGTTGTCT+TGG | + | chr8_4:17987147-17987166 | None:intergenic | 25.0% |
| !!! | ATTTCTCTCTGGAATAAATA+AGG | - | chr8_4:17987234-17987253 | Msa1317000:intron | 25.0% |
| !!! | TTTCTCTCTGGAATAAATAA+GGG | - | chr8_4:17987235-17987254 | Msa1317000:intron | 25.0% |
| ! | TTTGAAGACGATAAGTAAAT+AGG | - | chr8_4:17987294-17987313 | Msa1317000:intron | 25.0% |
| !!! | TTTTTGCTTATATTTGAGAC+CGG | + | chr8_4:17987865-17987884 | None:intergenic | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | - | chr8_4:17987889-17987908 | Msa1317000:intron | 25.0% |
| !!! | GATGTATTTGGTTCAAATTT+TGG | + | chr8_4:17987916-17987935 | None:intergenic | 25.0% |
| ! | GCAAACTTAGAAATAGTTAA+TGG | + | chr8_4:17988239-17988258 | None:intergenic | 25.0% |
| ! | GAACATACAAAATCTTAAGT+AGG | + | chr8_4:17988332-17988351 | None:intergenic | 25.0% |
| ! | TTGTGAAAATACATCATGAT+AGG | + | chr8_4:17988402-17988421 | None:intergenic | 25.0% |
| ! | AGTCAAGTGTTTATATCATA+AGG | - | chr8_4:17988661-17988680 | Msa1317000:intron | 25.0% |
| !! | ACTTATTTGAGTTTATCTAC+TGG | + | chr8_4:17988878-17988897 | None:intergenic | 25.0% |
| ! | TCAAATAAGTTAATCGAAAC+AGG | - | chr8_4:17988888-17988907 | Msa1317000:intron | 25.0% |
| !! | ATCTGTTGTTTATTCATCAA+CGG | + | chr8_4:17988992-17989011 | None:intergenic | 25.0% |
| ! | AACATATTACAAATTTCGCA+AGG | - | chr8_4:17989032-17989051 | Msa1317000:intron | 25.0% |
| ! | ACATATTACAAATTTCGCAA+GGG | - | chr8_4:17989033-17989052 | Msa1317000:intron | 25.0% |
| ! | ATATTTGTATATTCATCGTC+AGG | + | chr8_4:17989154-17989173 | None:intergenic | 25.0% |
| ! | ATATATCTATTATTAGGGAG+AGG | - | chr8_4:17989750-17989769 | Msa1317000:five_prime_UTR | 25.0% |
| ! | TGTAATTCATTTGATGCATT+TGG | - | chr8_4:17989791-17989810 | Msa1317000:five_prime_UTR | 25.0% |
| !!! | GAGATATTTTTTGAAAAGGG+TGG | + | chr8_4:17982058-17982077 | None:intergenic | 30.0% |
| !!! | GGGAGAGATATTTTTTGAAA+AGG | + | chr8_4:17982062-17982081 | None:intergenic | 30.0% |
| TAATGAGAATAGTAGCAATG+AGG | + | chr8_4:17982127-17982146 | None:intergenic | 30.0% | |
| GAAAAAGATTGAAAGTTTGG+GGG | + | chr8_4:17982206-17982225 | None:intergenic | 30.0% | |
| AACAACTCATGAACCAAAAA+TGG | + | chr8_4:17982403-17982422 | None:intergenic | 30.0% | |
| ! | ATTTTTGTGTTTGATGCATC+TGG | - | chr8_4:17982424-17982443 | Msa1317000:intron | 30.0% |
| ! | TTTTTGTGTTTGATGCATCT+GGG | - | chr8_4:17982425-17982444 | Msa1317000:intron | 30.0% |
| CTTCATTCACAATTTAGATC+TGG | - | chr8_4:17982532-17982551 | Msa1317000:intron | 30.0% | |
| GTTCATGTTAAAAATTGTGG+TGG | - | chr8_4:17982847-17982866 | Msa1317000:intron | 30.0% | |
| ! | TGTTAAAAATTGTGGTGGAA+TGG | - | chr8_4:17982852-17982871 | Msa1317000:intron | 30.0% |
| CATTTGAGAGCTTACTATAA+AGG | + | chr8_4:17983018-17983037 | None:intergenic | 30.0% | |
| !! | AAATAATTTTGGTGTGCTAC+TGG | - | chr8_4:17983060-17983079 | Msa1317000:intron | 30.0% |
| ACATGATTATGTAACTGCAT+AGG | - | chr8_4:17983096-17983115 | Msa1317000:intron | 30.0% | |
| TCTTCATTTCAGTTGAAAGA+AGG | + | chr8_4:17983347-17983366 | None:intergenic | 30.0% | |
| GGTTCAACCTAGATATTTAA+AGG | + | chr8_4:17983429-17983448 | None:intergenic | 30.0% | |
| AACAAGCATACAATAAGTTG+AGG | + | chr8_4:17983450-17983469 | None:intergenic | 30.0% | |
| !! | CTTGTTATGCATTTTTCTGT+TGG | - | chr8_4:17983464-17983483 | Msa1317000:intron | 30.0% |
| ! | TTATGCATTTTTCTGTTGGA+AGG | - | chr8_4:17983468-17983487 | Msa1317000:intron | 30.0% |
| TAGATAAACACTATCCACAA+CGG | + | chr8_4:17983681-17983700 | None:intergenic | 30.0% | |
| GAAAATTGCAAGGGAAATAT+TGG | + | chr8_4:17983771-17983790 | None:intergenic | 30.0% | |
| CAAAACAATGTTATCGTTTC+TGG | - | chr8_4:17983842-17983861 | Msa1317000:intron | 30.0% | |
| ! | ATGAATTTTCCGGTAATACT+TGG | - | chr8_4:17984117-17984136 | Msa1317000:intron | 30.0% |
| ! | TTAGACAAGTTGAAATAGCT+AGG | + | chr8_4:17984204-17984223 | None:intergenic | 30.0% |
| GTTTCTGTTATAGTTTCTCT+AGG | + | chr8_4:17984663-17984682 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr8_4:17984692-17984711 | Msa1317000:intron | 30.0% | |
| TTCAAGCAATGATAGCAAAA+AGG | - | chr8_4:17985029-17985048 | Msa1317000:CDS | 30.0% | |
| ATGATAGCAAAAAGGTTTCA+CGG | - | chr8_4:17985037-17985056 | Msa1317000:CDS | 30.0% | |
| AGGTCCAGAATTTAATAGAA+AGG | - | chr8_4:17985213-17985232 | Msa1317000:intron | 30.0% | |
| TGGTTAAAACTCTACTGAAT+CGG | - | chr8_4:17985267-17985286 | Msa1317000:intron | 30.0% | |
| TTAAACTGTTTATCCAGACA+GGG | + | chr8_4:17985436-17985455 | None:intergenic | 30.0% | |
| ATTAAACTGTTTATCCAGAC+AGG | + | chr8_4:17985437-17985456 | None:intergenic | 30.0% | |
| ACACGGAAAATCATTTATGA+GGG | + | chr8_4:17985664-17985683 | None:intergenic | 30.0% | |
| !! | TGTGTTATTTAGGTAAGACA+CGG | + | chr8_4:17985681-17985700 | None:intergenic | 30.0% |
| !! | TGGATAAACCTGTGTTATTT+AGG | + | chr8_4:17985691-17985710 | None:intergenic | 30.0% |
| ACACAGGTTTATCCATAAAT+TGG | - | chr8_4:17985696-17985715 | Msa1317000:intron | 30.0% | |
| ! | AAAGCATCAATTACAAAGCA+AGG | + | chr8_4:17985834-17985853 | None:intergenic | 30.0% |
| TTCATTAAATATGACGAGAG+GGG | + | chr8_4:17986062-17986081 | None:intergenic | 30.0% | |
| CTTCATTAAATATGACGAGA+GGG | + | chr8_4:17986063-17986082 | None:intergenic | 30.0% | |
| ACTTCATTAAATATGACGAG+AGG | + | chr8_4:17986064-17986083 | None:intergenic | 30.0% | |
| AACAAGGTTTCTAAACCTAA+TGG | - | chr8_4:17986174-17986193 | Msa1317000:intron | 30.0% | |
| ! | AACTACAATCAATGCACTTT+TGG | - | chr8_4:17986215-17986234 | Msa1317000:intron | 30.0% |
| ACAATGACATCAATTGTTAG+AGG | + | chr8_4:17986243-17986262 | None:intergenic | 30.0% | |
| AACACATGATATTGCAATTG+TGG | - | chr8_4:17986291-17986310 | Msa1317000:intron | 30.0% | |
| TTCTTAACTGTCCAAAGATT+TGG | + | chr8_4:17986421-17986440 | None:intergenic | 30.0% | |
| AGAAAAGATAAGGCATAGAA+GGG | + | chr8_4:17986636-17986655 | None:intergenic | 30.0% | |
| AAGAAAAGATAAGGCATAGA+AGG | + | chr8_4:17986637-17986656 | None:intergenic | 30.0% | |
| ! | ATGGTGTTAAAGAATAATGG+AGG | + | chr8_4:17986666-17986685 | None:intergenic | 30.0% |
| ! | ATTTTATGCCTTGATCATTG+TGG | - | chr8_4:17987053-17987072 | Msa1317000:intron | 30.0% |
| ! | TCATTTCATCTATTTCTCTC+TGG | - | chr8_4:17987223-17987242 | Msa1317000:intron | 30.0% |
| TAAAAATGAATAGAGGGAGT+AGG | - | chr8_4:17987345-17987364 | Msa1317000:intron | 30.0% | |
| ATTTGTGGTTTATTGAAGCA+TGG | - | chr8_4:17987447-17987466 | Msa1317000:intron | 30.0% | |
| TTCAGCATTTAATTCTGATG+TGG | - | chr8_4:17987636-17987655 | Msa1317000:intron | 30.0% | |
| TAATTCTGATGTGGTAAGTT+CGG | - | chr8_4:17987645-17987664 | Msa1317000:intron | 30.0% | |
| AATAAATTACCTCCCAAGTT+TGG | + | chr8_4:17987769-17987788 | None:intergenic | 30.0% | |
| ! | CTTTTTAGATATATAGACCC+TGG | - | chr8_4:17987798-17987817 | Msa1317000:intron | 30.0% |
| TAATAAGCGCTTAACTAATC+TGG | + | chr8_4:17987832-17987851 | None:intergenic | 30.0% | |
| ! | AGTTACTTATATTTGAGACC+CGG | - | chr8_4:17987952-17987971 | Msa1317000:intron | 30.0% |
| AAAATCTTAAGTAGGATCCA+AGG | + | chr8_4:17988324-17988343 | None:intergenic | 30.0% | |
| GATTGTCAACTAAATCTTGT+AGG | + | chr8_4:17988611-17988630 | None:intergenic | 30.0% | |
| ATAAACACTTGACTATGTTG+TGG | + | chr8_4:17988655-17988674 | None:intergenic | 30.0% | |
| TCATTAGCTATTAGAGCTTA+TGG | - | chr8_4:17988773-17988792 | Msa1317000:intron | 30.0% | |
| TATACTTACATCTTACCTTG+TGG | - | chr8_4:17989435-17989454 | Msa1317000:intron | 30.0% | |
| CTTGTTGCACATTAATTCTT+AGG | - | chr8_4:17989552-17989571 | Msa1317000:five_prime_UTR | 30.0% | |
| TGCACATTAATTCTTAGGTT+AGG | - | chr8_4:17989557-17989576 | Msa1317000:five_prime_UTR | 30.0% | |
| GCACATTAATTCTTAGGTTA+GGG | - | chr8_4:17989558-17989577 | Msa1317000:five_prime_UTR | 30.0% | |
| TTAGGTTAGGGAGAAAATTT+AGG | - | chr8_4:17989570-17989589 | Msa1317000:five_prime_UTR | 30.0% | |
| ! | TAAAATTTTGCAGAGTGACA+AGG | + | chr8_4:17989849-17989868 | None:intergenic | 30.0% |
| GAAGAAGTTCAAGGTAAAGT+AGG | + | chr8_4:17982247-17982266 | None:intergenic | 35.0% | |
| TTTACCTTGAACTTCTTCGT+GGG | - | chr8_4:17982249-17982268 | Msa1317000:exon | 35.0% | |
| AACTGAAATGAAGAACTTGC+AGG | - | chr8_4:17983353-17983372 | Msa1317000:intron | 35.0% | |
| GCATAAGAATATGCTTTCTC+TGG | - | chr8_4:17983527-17983546 | Msa1317000:intron | 35.0% | |
| AGATAAACACTATCCACAAC+GGG | + | chr8_4:17983680-17983699 | None:intergenic | 35.0% | |
| TGGAAGACAAGCTAGAAATA+AGG | + | chr8_4:17983873-17983892 | None:intergenic | 35.0% | |
| TTAAATTGCTAGCAAGGAGA+TGG | + | chr8_4:17983933-17983952 | None:intergenic | 35.0% | |
| !!! | CAGACTATTTTTGTAGCTGT+TGG | - | chr8_4:17984005-17984024 | Msa1317000:intron | 35.0% |
| TCCATTTCTCCAAGTATTAC+CGG | + | chr8_4:17984129-17984148 | None:intergenic | 35.0% | |
| ! | AAAGTATCACGCATGTTGAA+GGG | - | chr8_4:17984320-17984339 | Msa1317000:intron | 35.0% |
| TGACAACATTAGAGAGAGTT+AGG | - | chr8_4:17984502-17984521 | Msa1317000:intron | 35.0% | |
| GACAACATTAGAGAGAGTTA+GGG | - | chr8_4:17984503-17984522 | Msa1317000:intron | 35.0% | |
| ACCAATAGTAGAAAAGATGG+TGG | - | chr8_4:17984530-17984549 | Msa1317000:intron | 35.0% | |
| ! | TCCACCATCTTTTCTACTAT+TGG | + | chr8_4:17984534-17984553 | None:intergenic | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | - | chr8_4:17984538-17984557 | Msa1317000:intron | 35.0% |
| AGTCAAATCACTAGAGGTAA+AGG | - | chr8_4:17984633-17984652 | Msa1317000:intron | 35.0% | |
| TTGTTTGGATGTTCACTCTT+GGG | + | chr8_4:17984964-17984983 | None:intergenic | 35.0% | |
| ATTGTTTGGATGTTCACTCT+TGG | + | chr8_4:17984965-17984984 | None:intergenic | 35.0% | |
| ! | CATTTTCTTCCTTTGTCTTG+TGG | - | chr8_4:17985136-17985155 | Msa1317000:intron | 35.0% |
| ! | TCTGGACCTACAAAAGTTTT+TGG | + | chr8_4:17985202-17985221 | None:intergenic | 35.0% |
| GGCACCTTTCTATTAAATTC+TGG | + | chr8_4:17985220-17985239 | None:intergenic | 35.0% | |
| GGTTAAAACTCTACTGAATC+GGG | - | chr8_4:17985268-17985287 | Msa1317000:intron | 35.0% | |
| AAATATAAATGGCATGCCTG+AGG | + | chr8_4:17985339-17985358 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTAATGAGCTATTC+TGG | - | chr8_4:17985553-17985572 | Msa1317000:intron | 35.0% |
| GACACGGAAAATCATTTATG+AGG | + | chr8_4:17985665-17985684 | None:intergenic | 35.0% | |
| GTGTCTTACCTAAATAACAC+AGG | - | chr8_4:17985680-17985699 | Msa1317000:intron | 35.0% | |
| GTAAGAATTTACCAGGCATA+GGG | + | chr8_4:17986040-17986059 | None:intergenic | 35.0% | |
| ! | AATCACCCTCCCTTTTAATA+GGG | - | chr8_4:17986139-17986158 | Msa1317000:intron | 35.0% |
| ATGCTTCGACCCTATTAAAA+GGG | + | chr8_4:17986151-17986170 | None:intergenic | 35.0% | |
| ATTGGATAACGCTTTCAATC+AGG | + | chr8_4:17986271-17986290 | None:intergenic | 35.0% | |
| CTTTGGACAGTTAAGAAGTT+TGG | - | chr8_4:17986424-17986443 | Msa1317000:intron | 35.0% | |
| CATAAGGCTCAAATATTCTC+AGG | + | chr8_4:17986535-17986554 | None:intergenic | 35.0% | |
| !! | TACCTTTCGGTGTTAAATGA+CGG | - | chr8_4:17986584-17986603 | Msa1317000:intron | 35.0% |
| TTAACTGCACTGCAAACAAA+TGG | + | chr8_4:17986685-17986704 | None:intergenic | 35.0% | |
| TGCAGTTAACAATCTACCTA+TGG | - | chr8_4:17986696-17986715 | Msa1317000:intron | 35.0% | |
| GCAGTTAACAATCTACCTAT+GGG | - | chr8_4:17986697-17986716 | Msa1317000:intron | 35.0% | |
| ! | TCAAGTTGTCATGTGGTTAA+TGG | - | chr8_4:17986787-17986806 | Msa1317000:CDS | 35.0% |
| AGTAAAACCTAAGTGCATGA+CGG | + | chr8_4:17987079-17987098 | None:intergenic | 35.0% | |
| GACAACTAAAAAGGAACTGA+GGG | + | chr8_4:17987102-17987121 | None:intergenic | 35.0% | |
| TGACAACTAAAAAGGAACTG+AGG | + | chr8_4:17987103-17987122 | None:intergenic | 35.0% | |
| AATAGAGGGAGTAGGTTAAT+TGG | - | chr8_4:17987353-17987372 | Msa1317000:intron | 35.0% | |
| GTAGGTTAATTGGTTGAATG+CGG | - | chr8_4:17987363-17987382 | Msa1317000:intron | 35.0% | |
| !! | AGTAATTTGCTCTGCATTTG+TGG | - | chr8_4:17987432-17987451 | Msa1317000:intron | 35.0% |
| ATATTTCCGATGCAGTGAAA+GGG | + | chr8_4:17987585-17987604 | None:intergenic | 35.0% | |
| AATCTGCGGTTAAATCTGAT+AGG | + | chr8_4:17987744-17987763 | None:intergenic | 35.0% | |
| TTAGATATATAGACCCTGGT+TGG | - | chr8_4:17987802-17987821 | Msa1317000:intron | 35.0% | |
| GGGTCTCAAATATAAGTAAC+TGG | + | chr8_4:17987953-17987972 | None:intergenic | 35.0% | |
| TACATAAGCACTTACTACTC+CGG | + | chr8_4:17987974-17987993 | None:intergenic | 35.0% | |
| ! | TTGTCCTCTGAAAAGAAGAA+TGG | - | chr8_4:17988087-17988106 | Msa1317000:intron | 35.0% |
| TAACAGTTCTCCACAGATAA+GGG | + | chr8_4:17988164-17988183 | None:intergenic | 35.0% | |
| !! | GCATTTTGAAAATCACACCT+TGG | - | chr8_4:17988304-17988323 | Msa1317000:intron | 35.0% |
| TCTGAATCAGATGGCAAAAA+TGG | + | chr8_4:17988481-17988500 | None:intergenic | 35.0% | |
| AGACTGTTTAAGAGAGCTTA+TGG | + | chr8_4:17988841-17988860 | None:intergenic | 35.0% | |
| TCATCTGTTGTAGAGTCTAT+AGG | + | chr8_4:17988951-17988970 | None:intergenic | 35.0% | |
| GCTCTGTGAACAACTAAAAA+AGG | - | chr8_4:17989081-17989100 | Msa1317000:intron | 35.0% | |
| AGTGAATTGCTCATGCTAAA+GGG | + | chr8_4:17989114-17989133 | None:intergenic | 35.0% | |
| AAGTGAATTGCTCATGCTAA+AGG | + | chr8_4:17989115-17989134 | None:intergenic | 35.0% | |
| CCACTGAAATTAAAACCACA+AGG | + | chr8_4:17989453-17989472 | None:intergenic | 35.0% | |
| !!! | CCTTGTGGTTTTAATTTCAG+TGG | - | chr8_4:17989450-17989469 | Msa1317000:five_prime_UTR | 35.0% |
| AGGAGAAACCTTCAACTTAA+GGG | - | chr8_4:17989518-17989537 | Msa1317000:five_prime_UTR | 35.0% | |
| ! | ATGTCATCATCTAGCTTACT+TGG | - | chr8_4:17989601-17989620 | Msa1317000:five_prime_UTR | 35.0% |
| CTTTACCTTGAACTTCTTCG+TGG | - | chr8_4:17982248-17982267 | Msa1317000:exon | 40.0% | |
| TTACCTTGAACTTCTTCGTG+GGG | - | chr8_4:17982250-17982269 | Msa1317000:exon | 40.0% | |
| TTGAGTTCAGTGGAAGTTAG+TGG | - | chr8_4:17983289-17983308 | Msa1317000:CDS | 40.0% | |
| CAGTTGTGAAAGAGAGAAGA+TGG | + | chr8_4:17983893-17983912 | None:intergenic | 40.0% | |
| ! | TTTTTGTAGCTGTTGGCAAC+TGG | - | chr8_4:17984012-17984031 | Msa1317000:intron | 40.0% |
| TCCGGTAATACTTGGAGAAA+TGG | - | chr8_4:17984125-17984144 | Msa1317000:intron | 40.0% | |
| TGGAGAAATGGAAGTTTGTG+CGG | - | chr8_4:17984137-17984156 | Msa1317000:intron | 40.0% | |
| TTTGAAAAATTGGCGAGCGT+TGG | - | chr8_4:17984272-17984291 | Msa1317000:CDS | 40.0% | |
| TTGAAAAATTGGCGAGCGTT+GGG | - | chr8_4:17984273-17984292 | Msa1317000:CDS | 40.0% | |
| !! | GAAAGTATCACGCATGTTGA+AGG | - | chr8_4:17984319-17984338 | Msa1317000:intron | 40.0% |
| TTATTGGACGACTGTAAGAC+CGG | - | chr8_4:17984349-17984368 | Msa1317000:intron | 40.0% | |
| ! | TGATGATGATGATGTTGCGT+TGG | - | chr8_4:17984444-17984463 | Msa1317000:intron | 40.0% |
| AACATTAGAGAGAGTTAGGG+TGG | - | chr8_4:17984506-17984525 | Msa1317000:intron | 40.0% | |
| GGCACCAATAGTAGAAAAGA+TGG | - | chr8_4:17984527-17984546 | Msa1317000:intron | 40.0% | |
| AAACTAGGCTTAGGTGGTTT+GGG | - | chr8_4:17984553-17984572 | Msa1317000:intron | 40.0% | |
| AGCTAGGAGAGTAGATCAAA+TGG | - | chr8_4:17984605-17984624 | Msa1317000:intron | 40.0% | |
| TAGGAGAGTAGATCAAATGG+AGG | - | chr8_4:17984608-17984627 | Msa1317000:intron | 40.0% | |
| AGGAGAGTAGATCAAATGGA+GGG | - | chr8_4:17984609-17984628 | Msa1317000:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAGTTG+GGG | + | chr8_4:17984739-17984758 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAGTT+GGG | + | chr8_4:17984740-17984759 | None:intergenic | 40.0% |
| GCATCAGTTGTGTGATTGTT+TGG | + | chr8_4:17984979-17984998 | None:intergenic | 40.0% | |
| ATACCAAGAGCTGTAAATCC+GGG | + | chr8_4:17985305-17985324 | None:intergenic | 40.0% | |
| CATACCAAGAGCTGTAAATC+CGG | + | chr8_4:17985306-17985325 | None:intergenic | 40.0% | |
| AGCTCTTGGTATGCATCTTT+AGG | - | chr8_4:17985313-17985332 | Msa1317000:intron | 40.0% | |
| AGTGTGGCAAAAGTTAGAAG+AGG | - | chr8_4:17985863-17985882 | Msa1317000:CDS | 40.0% | |
| GGTAAGAATTTACCAGGCAT+AGG | + | chr8_4:17986041-17986060 | None:intergenic | 40.0% | |
| ! | GAATCACCCTCCCTTTTAAT+AGG | - | chr8_4:17986138-17986157 | Msa1317000:intron | 40.0% |
| TTCGACCCTATTAAAAGGGA+GGG | + | chr8_4:17986147-17986166 | None:intergenic | 40.0% | |
| CATGCTTCGACCCTATTAAA+AGG | + | chr8_4:17986152-17986171 | None:intergenic | 40.0% | |
| CTTTCCTTTCTTGTCCTTGA+TGG | - | chr8_4:17986509-17986528 | Msa1317000:CDS | 40.0% | |
| CAAATATTCTCAGGCCATCA+AGG | + | chr8_4:17986526-17986545 | None:intergenic | 40.0% | |
| ATCCGTCATTTAACACCGAA+AGG | + | chr8_4:17986589-17986608 | None:intergenic | 40.0% | |
| !! | TCGGTGTTAAATGACGGATT+AGG | - | chr8_4:17986590-17986609 | Msa1317000:intron | 40.0% |
| ! | TGTAGTACTGGATATCCCAT+AGG | + | chr8_4:17986715-17986734 | None:intergenic | 40.0% |
| TTCCCAGAATTCATCCGAAT+GGG | + | chr8_4:17986838-17986857 | None:intergenic | 40.0% | |
| ATTCCCAGAATTCATCCGAA+TGG | + | chr8_4:17986839-17986858 | None:intergenic | 40.0% | |
| GGTTTATTGAAGCATGGTGA+TGG | - | chr8_4:17987453-17987472 | Msa1317000:intron | 40.0% | |
| GCTCCAATGATTCCACAAAA+CGG | - | chr8_4:17987496-17987515 | Msa1317000:intron | 40.0% | |
| ! | GTACCGTTTTGTGGAATCAT+TGG | + | chr8_4:17987502-17987521 | None:intergenic | 40.0% |
| ! | GATGACATTGTACCGTTTTG+TGG | + | chr8_4:17987511-17987530 | None:intergenic | 40.0% |
| TCATTTCCCTTTCACTGCAT+CGG | - | chr8_4:17987576-17987595 | Msa1317000:intron | 40.0% | |
| GATATTTCCGATGCAGTGAA+AGG | + | chr8_4:17987586-17987605 | None:intergenic | 40.0% | |
| TTCACTGCATCGGAAATATC+AGG | - | chr8_4:17987586-17987605 | Msa1317000:intron | 40.0% | |
| TGCATCGGAAATATCAGGAA+TGG | - | chr8_4:17987591-17987610 | Msa1317000:intron | 40.0% | |
| GCATCGGAAATATCAGGAAT+GGG | - | chr8_4:17987592-17987611 | Msa1317000:intron | 40.0% | |
| AACCGCAGATTTACCAAACT+TGG | - | chr8_4:17987753-17987772 | Msa1317000:intron | 40.0% | |
| ACCGCAGATTTACCAAACTT+GGG | - | chr8_4:17987754-17987773 | Msa1317000:intron | 40.0% | |
| TCCCAAGTTTGGTAAATCTG+CGG | + | chr8_4:17987758-17987777 | None:intergenic | 40.0% | |
| CTAATCTGGTTAACCAACCA+GGG | + | chr8_4:17987818-17987837 | None:intergenic | 40.0% | |
| ACTAATCTGGTTAACCAACC+AGG | + | chr8_4:17987819-17987838 | None:intergenic | 40.0% | |
| CGCTTATTATATACTCCCTC+CGG | - | chr8_4:17987843-17987862 | Msa1317000:intron | 40.0% | |
| ! | TGCTTATATTTGAGACCGGA+GGG | + | chr8_4:17987861-17987880 | None:intergenic | 40.0% |
| ! | TTGCTTATATTTGAGACCGG+AGG | + | chr8_4:17987862-17987881 | None:intergenic | 40.0% |
| ACATAAGCACTTACTACTCC+GGG | + | chr8_4:17987973-17987992 | None:intergenic | 40.0% | |
| ! | TGCACCATTCTTCTTTTCAG+AGG | + | chr8_4:17988094-17988113 | None:intergenic | 40.0% |
| CTAACAGTTCTCCACAGATA+AGG | + | chr8_4:17988165-17988184 | None:intergenic | 40.0% | |
| ! | TTGAAGTCTTAGAGCTTGCT+TGG | + | chr8_4:17988370-17988389 | None:intergenic | 40.0% |
| GTTGAACTCTTTGCAGATCT+TGG | - | chr8_4:17988430-17988449 | Msa1317000:exon | 40.0% | |
| AGCAACATGTCTGAATCAGA+TGG | + | chr8_4:17988490-17988509 | None:intergenic | 40.0% | |
| TCTCCAGATCAACAGGATAT+AGG | - | chr8_4:17988514-17988533 | Msa1317000:five_prime_UTR | 40.0% | |
| CTACCTATATCCTGTTGATC+TGG | + | chr8_4:17988520-17988539 | None:intergenic | 40.0% | |
| TTGTATTAGGTTCGGGATGT+AGG | - | chr8_4:17988924-17988943 | Msa1317000:intron | 40.0% | |
| GTGAATTGCTCATGCTAAAG+GGG | + | chr8_4:17989113-17989132 | None:intergenic | 40.0% | |
| GAGGAGAAACCTTCAACTTA+AGG | - | chr8_4:17989517-17989536 | Msa1317000:five_prime_UTR | 40.0% | |
| GGAGAAACCTTCAACTTAAG+GGG | - | chr8_4:17989519-17989538 | Msa1317000:five_prime_UTR | 40.0% | |
| CTATACTGTAACCGAAGTGT+AGG | - | chr8_4:17989632-17989651 | Msa1317000:five_prime_UTR | 40.0% | |
| ! | CAGAGAGAACAAGTGTTGCT+GGG | + | chr8_4:17982013-17982032 | None:intergenic | 45.0% |
| ! | ACAGAGAGAACAAGTGTTGC+TGG | + | chr8_4:17982014-17982033 | None:intergenic | 45.0% |
| GAGAGAGAGAGAGAGAGAAT+GGG | + | chr8_4:17982082-17982101 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+TGG | + | chr8_4:17982083-17982102 | None:intergenic | 45.0% | |
| AAACCCCACGAAGAAGTTCA+AGG | + | chr8_4:17982256-17982275 | None:intergenic | 45.0% | |
| TAACGGTTATTGAAGCGGCT+TGG | - | chr8_4:17983183-17983202 | Msa1317000:intron | 45.0% | |
| GCGAACAATCTTGAGTTCAG+TGG | - | chr8_4:17983279-17983298 | Msa1317000:CDS | 45.0% | |
| GGAAGGATGCATTCATCGTA+AGG | - | chr8_4:17983485-17983504 | Msa1317000:intron | 45.0% | |
| TAAGACCGGCGATGTTGTAT+GGG | - | chr8_4:17984363-17984382 | Msa1317000:intron | 45.0% | |
| ATGATGTTGCGTTGGATGTG+TGG | - | chr8_4:17984452-17984471 | Msa1317000:intron | 45.0% | |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr8_4:17984544-17984563 | Msa1317000:intron | 45.0% |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr8_4:17984552-17984571 | Msa1317000:intron | 45.0% | |
| GGAGAGTAGATCAAATGGAG+GGG | - | chr8_4:17984610-17984629 | Msa1317000:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAGT+TGG | + | chr8_4:17984741-17984760 | None:intergenic | 45.0% |
| CCAACTAGTGGGATAAGACT+TGG | - | chr8_4:17984738-17984757 | Msa1317000:intron | 45.0% | |
| GTTTGCATCACCACAAGAGT+AGG | + | chr8_4:17984811-17984830 | None:intergenic | 45.0% | |
| TAGCAAAAAGGTTTCACGGC+AGG | - | chr8_4:17985041-17985060 | Msa1317000:CDS | 45.0% | |
| AATCGGGCAAAGATAGATCC+CGG | - | chr8_4:17985284-17985303 | Msa1317000:intron | 45.0% | |
| GTATACATTTAGGCCCTGTC+TGG | - | chr8_4:17985420-17985439 | Msa1317000:intron | 45.0% | |
| ! | AATGGAACCTTTGGAGGCAT+GGG | + | chr8_4:17985993-17986012 | None:intergenic | 45.0% |
| ATTGGAGCCAATGGAACCTT+TGG | + | chr8_4:17986002-17986021 | None:intergenic | 45.0% | |
| CCATTCTGTATTGGAGCCAA+TGG | + | chr8_4:17986011-17986030 | None:intergenic | 45.0% | |
| !! | CCATTGGCTCCAATACAGAA+TGG | - | chr8_4:17986008-17986027 | Msa1317000:intron | 45.0% |
| ! | GGGTGGATTCCATTCTGTAT+TGG | + | chr8_4:17986020-17986039 | None:intergenic | 45.0% |
| AGAATTTACCAGGCATAGGG+TGG | + | chr8_4:17986037-17986056 | None:intergenic | 45.0% | |
| GAGAGGGGTAAGAATTTACC+AGG | + | chr8_4:17986047-17986066 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGTTCACCTA+TGG | - | chr8_4:17986116-17986135 | Msa1317000:intron | 45.0% | |
| AAAAGGGAGGGTGATTCCAT+AGG | + | chr8_4:17986135-17986154 | None:intergenic | 45.0% | |
| CTTCGACCCTATTAAAAGGG+AGG | + | chr8_4:17986148-17986167 | None:intergenic | 45.0% | |
| ATAGGATGCTGCTGTAGTAC+TGG | + | chr8_4:17986727-17986746 | None:intergenic | 45.0% | |
| ATGACAACTTGACATGCCCA+TGG | + | chr8_4:17986779-17986798 | None:intergenic | 45.0% | |
| ACCCCATTCGGATGAATTCT+GGG | - | chr8_4:17986833-17986852 | Msa1317000:CDS | 45.0% | |
| TCCCAGAATTCATCCGAATG+GGG | + | chr8_4:17986837-17986856 | None:intergenic | 45.0% | |
| GGTTAATTGGTTGAATGCGG+AGG | - | chr8_4:17987366-17987385 | Msa1317000:intron | 45.0% | |
| GGAATCATTGGAGCCATATC+AGG | + | chr8_4:17987490-17987509 | None:intergenic | 45.0% | |
| ! | ACTCACTGGCATTTCTGAGA+CGG | + | chr8_4:17987533-17987552 | None:intergenic | 45.0% |
| AATGCCAGTGAGTCCAACAT+CGG | - | chr8_4:17987540-17987559 | Msa1317000:intron | 45.0% | |
| TCTGATGTGGTAAGTTCGGT+TGG | - | chr8_4:17987649-17987668 | Msa1317000:intron | 45.0% | |
| GATCGCTGGATCAAATTCAG+TGG | - | chr8_4:17987710-17987729 | Msa1317000:intron | 45.0% | |
| GCAGATTTACCAAACTTGGG+AGG | - | chr8_4:17987757-17987776 | Msa1317000:intron | 45.0% | |
| TCTGTGTGTTCCCTTATCTG+TGG | - | chr8_4:17988151-17988170 | Msa1317000:intron | 45.0% | |
| TTTGCAGATCTTGGAGCTCT+AGG | - | chr8_4:17988439-17988458 | Msa1317000:exon | 45.0% | |
| !! | TGGAGCTCTAGGAAACTATC+CGG | - | chr8_4:17988450-17988469 | Msa1317000:five_prime_UTR | 45.0% |
| GCTTGAATCTCCAGATCAAC+AGG | - | chr8_4:17988507-17988526 | Msa1317000:five_prime_UTR | 45.0% | |
| ATCCCGAACCTAATACAACC+TGG | + | chr8_4:17988922-17988941 | None:intergenic | 45.0% | |
| AGGGTTGCATTAGTGTCTTG+TGG | - | chr8_4:17989052-17989071 | Msa1317000:intron | 45.0% | |
| GTTGCATTAGTGTCTTGTGG+AGG | - | chr8_4:17989055-17989074 | Msa1317000:intron | 45.0% | |
| ATTGCTCATGCTAAAGGGGT+CGG | + | chr8_4:17989109-17989128 | None:intergenic | 45.0% | |
| ! | TCATCTGATTGAGAGCATGG+AGG | + | chr8_4:17989499-17989518 | None:intergenic | 45.0% |
| TCCATGCTCTCAATCAGATG+AGG | - | chr8_4:17989498-17989517 | Msa1317000:five_prime_UTR | 45.0% | |
| TCCTCATCTGATTGAGAGCA+TGG | + | chr8_4:17989502-17989521 | None:intergenic | 45.0% | |
| GAAACCTTCAACTTAAGGGG+AGG | - | chr8_4:17989522-17989541 | Msa1317000:five_prime_UTR | 45.0% | |
| !! | CTTTCCTCCCCTTAAGTTGA+AGG | + | chr8_4:17989529-17989548 | None:intergenic | 45.0% |
| ! | ATCTAGCTTACTTGGCATGC+AGG | - | chr8_4:17989609-17989628 | Msa1317000:five_prime_UTR | 45.0% |
| AGATAAGGCTGCCTACACTT+CGG | + | chr8_4:17989646-17989665 | None:intergenic | 45.0% | |
| !! | AAAAATCTATATATTATATT+TGG | + | chr8_4:17986398-17986417 | None:intergenic | 5.0% |
| !! | ATATATTATATAATAAGATA+AGG | + | chr8_4:17989661-17989680 | None:intergenic | 5.0% |
| ! | GAACAAGTGTTGCTGGGAGT+GGG | + | chr8_4:17982007-17982026 | None:intergenic | 50.0% |
| ! | AGAACAAGTGTTGCTGGGAG+TGG | + | chr8_4:17982008-17982027 | None:intergenic | 50.0% |
| ! | CTTTGAGGGGTTGCAGATTC+AGG | - | chr8_4:17982325-17982344 | Msa1317000:intron | 50.0% |
| GGGTTGCAGATTCAGGAACT+GGG | - | chr8_4:17982332-17982351 | Msa1317000:intron | 50.0% | |
| ATTCAGGAACTGGGTGTGTG+AGG | - | chr8_4:17982341-17982360 | Msa1317000:intron | 50.0% | |
| ATTCATATACGGCGGTGTGC+TGG | - | chr8_4:17983248-17983267 | Msa1317000:intron | 50.0% | |
| ATGTTGTATGCGACCCGTTG+TGG | - | chr8_4:17983664-17983683 | Msa1317000:intron | 50.0% | |
| GTAAGACCGGCGATGTTGTA+TGG | - | chr8_4:17984362-17984381 | Msa1317000:intron | 50.0% | |
| TGTTGTATGGGACGGAGTGT+TGG | - | chr8_4:17984375-17984394 | Msa1317000:intron | 50.0% | |
| ! | GTTGTATGGGACGGAGTGTT+GGG | - | chr8_4:17984376-17984395 | Msa1317000:intron | 50.0% |
| TGGTGGAAACTAGGCTTAGG+TGG | - | chr8_4:17984547-17984566 | Msa1317000:intron | 50.0% | |
| GGCATGTAGAGAGAAGACCT+GGG | - | chr8_4:17984574-17984593 | Msa1317000:intron | 50.0% | |
| GCATGTAGAGAGAAGACCTG+GGG | - | chr8_4:17984575-17984594 | Msa1317000:intron | 50.0% | |
| ! | GACCTGGGGATTTTGTAGCT+AGG | - | chr8_4:17984589-17984608 | Msa1317000:intron | 50.0% |
| CTCCTAGCTACAAAATCCCC+AGG | + | chr8_4:17984594-17984613 | None:intergenic | 50.0% | |
| GAGGGGAGTCAAATCACTAG+AGG | - | chr8_4:17984627-17984646 | Msa1317000:intron | 50.0% | |
| ATGTAGCTGACCCCAACTAG+TGG | - | chr8_4:17984726-17984745 | Msa1317000:intron | 50.0% | |
| TGTAGCTGACCCCAACTAGT+GGG | - | chr8_4:17984727-17984746 | Msa1317000:intron | 50.0% | |
| TGCCTTGCTTCCTACTCTTG+TGG | - | chr8_4:17984798-17984817 | Msa1317000:intron | 50.0% | |
| CACCACAAGAGTAGGAAGCA+AGG | + | chr8_4:17984803-17984822 | None:intergenic | 50.0% | |
| GATCCCGGATTTACAGCTCT+TGG | - | chr8_4:17985299-17985318 | Msa1317000:intron | 50.0% | |
| GGTATGCATCTTTAGGCCTC+AGG | - | chr8_4:17985320-17985339 | Msa1317000:intron | 50.0% | |
| ! | CAATGGAACCTTTGGAGGCA+TGG | + | chr8_4:17985994-17986013 | None:intergenic | 50.0% |
| CATGCCTCCAAAGGTTCCAT+TGG | - | chr8_4:17985992-17986011 | Msa1317000:intron | 50.0% | |
| AATGGAATCCACCCTATGCC+TGG | - | chr8_4:17986026-17986045 | Msa1317000:intron | 50.0% | |
| AGGGTCGAAGCATGAGAACA+AGG | - | chr8_4:17986158-17986177 | Msa1317000:intron | 50.0% | |
| CAGGCCATCAAGGACAAGAA+AGG | + | chr8_4:17986516-17986535 | None:intergenic | 50.0% | |
| TCAGCCTCATATGGACTCCA+TGG | - | chr8_4:17986759-17986778 | Msa1317000:CDS | 50.0% | |
| CAGCCTCATATGGACTCCAT+GGG | - | chr8_4:17986760-17986779 | Msa1317000:CDS | 50.0% | |
| ATGCCCATGGAGTCCATATG+AGG | + | chr8_4:17986766-17986785 | None:intergenic | 50.0% | |
| ! | GGGCATGTCAAGTTGTCATG+TGG | - | chr8_4:17986780-17986799 | Msa1317000:CDS | 50.0% |
| CGAATGGGGTGGAAATTGCT+CGG | + | chr8_4:17986823-17986842 | None:intergenic | 50.0% | |
| CGAGCAATTTCCACCCCATT+CGG | - | chr8_4:17986821-17986840 | Msa1317000:CDS | 50.0% | |
| CAGAATTCATCCGAATGGGG+TGG | + | chr8_4:17986834-17986853 | None:intergenic | 50.0% | |
| CACCCCATTCGGATGAATTC+TGG | - | chr8_4:17986832-17986851 | Msa1317000:CDS | 50.0% | |
| CATGACGGCCACAATGATCA+AGG | + | chr8_4:17987064-17987083 | None:intergenic | 50.0% | |
| ATTGTGGCCGTCATGCACTT+AGG | - | chr8_4:17987069-17987088 | Msa1317000:intron | 50.0% | |
| ! | GAACGGGATTTCTAGATCGC+TGG | - | chr8_4:17987696-17987715 | Msa1317000:intron | 50.0% |
| !! | CTTGCTTGGTGTCGACAGAT+TGG | + | chr8_4:17988356-17988375 | None:intergenic | 50.0% |
| !! | GGAGCTCTAGGAAACTATCC+GGG | - | chr8_4:17988451-17988470 | Msa1317000:five_prime_UTR | 50.0% |
| GATGGCAAAAATGGCGAACC+CGG | + | chr8_4:17988472-17988491 | None:intergenic | 50.0% | |
| CCTAATACAACCTGGCGCAT+TGG | + | chr8_4:17988914-17988933 | None:intergenic | 50.0% | |
| CCAATGCGCCAGGTTGTATT+AGG | - | chr8_4:17988911-17988930 | Msa1317000:intron | 50.0% | |
| GCGCCAGGTTGTATTAGGTT+CGG | - | chr8_4:17988916-17988935 | Msa1317000:intron | 50.0% | |
| CGCCAGGTTGTATTAGGTTC+GGG | - | chr8_4:17988917-17988936 | Msa1317000:intron | 50.0% | |
| GAGAGGTGAAGACAGTGCTT+AGG | - | chr8_4:17989767-17989786 | Msa1317000:five_prime_UTR | 50.0% | |
| GGGGTTGCAGATTCAGGAAC+TGG | - | chr8_4:17982331-17982350 | Msa1317000:intron | 55.0% | |
| !! | AAATTGGCGAGCGTTGGGCA+AGG | - | chr8_4:17984278-17984297 | Msa1317000:CDS | 55.0% |
| ACCGGCGATGTTGTATGGGA+CGG | - | chr8_4:17984367-17984386 | Msa1317000:intron | 55.0% | |
| TCCGTCCCATACAACATCGC+CGG | + | chr8_4:17984371-17984390 | None:intergenic | 55.0% | |
| GGGCATGTAGAGAGAAGACC+TGG | - | chr8_4:17984573-17984592 | Msa1317000:intron | 55.0% | |
| GATGCTCCTGTTGCAGACTC+AGG | - | chr8_4:17984994-17985013 | Msa1317000:intron | 55.0% | |
| ! | GAAGTGTCCCATGCCTCCAA+AGG | - | chr8_4:17985983-17986002 | Msa1317000:intron | 55.0% |
| GGAGCCAATGGAACCTTTGG+AGG | + | chr8_4:17985999-17986018 | None:intergenic | 55.0% | |
| GTCCATATGAGGCTGACCTG+CGG | + | chr8_4:17986755-17986774 | None:intergenic | 55.0% | |
| !! | GGTGGAAATTGCTCGGTGCA+GGG | + | chr8_4:17986816-17986835 | None:intergenic | 55.0% |
| GGACCACAGTGCTCCTGATA+TGG | - | chr8_4:17987474-17987493 | Msa1317000:intron | 55.0% | |
| !! | GAGCCATATCAGGAGCACTG+TGG | + | chr8_4:17987480-17987499 | None:intergenic | 55.0% |
| GCTGAGCCTGAGTCTGCAAC+AGG | + | chr8_4:17985003-17985022 | None:intergenic | 60.0% | |
| ATATGAGGCTGACCTGCGGC+TGG | + | chr8_4:17986751-17986770 | None:intergenic | 60.0% | |
| AGCCGCAGGTCAGCCTCATA+TGG | - | chr8_4:17986750-17986769 | Msa1317000:CDS | 60.0% | |
| !! | GGGTGGAAATTGCTCGGTGC+AGG | + | chr8_4:17986817-17986836 | None:intergenic | 60.0% |
| GCCAGTGAGTCCAACATCGG+TGG | - | chr8_4:17987543-17987562 | Msa1317000:intron | 60.0% | |
| GCCACCGATGTTGGACTCAC+TGG | + | chr8_4:17987547-17987566 | None:intergenic | 60.0% | |
| CCACTCGATGCCACCGATGT+TGG | + | chr8_4:17987556-17987575 | None:intergenic | 60.0% | |
| ! | CCAACATCGGTGGCATCGAG+TGG | - | chr8_4:17987553-17987572 | Msa1317000:intron | 60.0% |
| GGTTGGACTGCAGCTTGCAC+CGG | - | chr8_4:17987666-17987685 | Msa1317000:intron | 60.0% | |
| GAAATCCCGTTCCCGCCATC+CGG | + | chr8_4:17987688-17987707 | None:intergenic | 60.0% | |
| TCGAAACAGGCCAATGCGCC+AGG | - | chr8_4:17988901-17988920 | Msa1317000:intron | 60.0% | |
| CAGCATCCTATGCCAGCCGC+AGG | - | chr8_4:17986736-17986755 | Msa1317000:CDS | 65.0% | |
| GGACTGCAGCTTGCACCGGA+TGG | - | chr8_4:17987670-17987689 | Msa1317000:intron | 65.0% | |
| CTGCAGCTTGCACCGGATGG+CGG | - | chr8_4:17987673-17987692 | Msa1317000:intron | 65.0% | |
| TGCAGCTTGCACCGGATGGC+GGG | - | chr8_4:17987674-17987693 | Msa1317000:intron | 65.0% | |
| !! | CTTGCACCGGATGGCGGGAA+CGG | - | chr8_4:17987679-17987698 | Msa1317000:intron | 65.0% |
| !! | TTGCACCGGATGGCGGGAAC+GGG | - | chr8_4:17987680-17987699 | Msa1317000:intron | 65.0% |
| GGCTGACCTGCGGCTGGCAT+AGG | + | chr8_4:17986745-17986764 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 17981899 | 17989901 | 17981899 | ID=Msa1317000;Name=Msa1317000 |
| chr8_4 | mRNA | 17981899 | 17989901 | 17981899 | ID=Msa1317000-mRNA-1;Parent=Msa1317000;Name=Msa1317000-mRNA-1;_AED=0.14;_eAED=0.14;_QI=585|0.75|0.77|1|0.87|0.77|9|364|299 |
| chr8_4 | exon | 17981899 | 17982330 | 17981899 | ID=Msa1317000-mRNA-1:exon:6693;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17983265 | 17983354 | 17983265 | ID=Msa1317000-mRNA-1:exon:6692;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17984139 | 17984335 | 17984139 | ID=Msa1317000-mRNA-1:exon:6691;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17985015 | 17985099 | 17985015 | ID=Msa1317000-mRNA-1:exon:6690;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17985753 | 17985935 | 17985753 | ID=Msa1317000-mRNA-1:exon:6689;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17986480 | 17986585 | 17986480 | ID=Msa1317000-mRNA-1:exon:6688;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17986726 | 17986881 | 17986726 | ID=Msa1317000-mRNA-1:exon:6687;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17988426 | 17988561 | 17988426 | ID=Msa1317000-mRNA-1:exon:6686;Parent=Msa1317000-mRNA-1 |
| chr8_4 | exon | 17989438 | 17989901 | 17989438 | ID=Msa1317000-mRNA-1:exon:6685;Parent=Msa1317000-mRNA-1 |
| chr8_4 | five_prime_UTR | 17989438 | 17989901 | 17989438 | ID=Msa1317000-mRNA-1:five_prime_utr;Parent=Msa1317000-mRNA-1 |
| chr8_4 | five_prime_UTR | 17988441 | 17988561 | 17988441 | ID=Msa1317000-mRNA-1:five_prime_utr;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17988426 | 17988440 | 17988426 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17986726 | 17986881 | 17986726 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17986480 | 17986585 | 17986480 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17985753 | 17985935 | 17985753 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17985015 | 17985099 | 17985015 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17984139 | 17984335 | 17984139 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17983265 | 17983354 | 17983265 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | CDS | 17982263 | 17982330 | 17982263 | ID=Msa1317000-mRNA-1:cds;Parent=Msa1317000-mRNA-1 |
| chr8_4 | three_prime_UTR | 17981899 | 17982262 | 17981899 | ID=Msa1317000-mRNA-1:three_prime_utr;Parent=Msa1317000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
