Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177210 | XP_013444645.1 | 81.543 | 363 | 3 | 2 | 1 | 299 | 1 | 363 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0225880 | Msa1177210 | 0.804947 | 1.691644e-49 | -8.615850e-47 |
| Msa1177210 | Msa1317000 | 0.869588 | 2.766417e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177210 | MtrunA17_Chr8g0347131 | 81.543 | 363 | 3 | 2 | 1 | 299 | 1 | 363 | 0.0 | 549 |
| Msa1177210 | MtrunA17_Chr1g0171941 | 61.739 | 115 | 41 | 2 | 43 | 155 | 2 | 115 | 1.05e-39 | 140 |
| Msa1177210 | MtrunA17_Chr7g0256541 | 51.613 | 93 | 44 | 1 | 66 | 158 | 1 | 92 | 1.54e-22 | 96.7 |
| Msa1177210 | MtrunA17_Chr8g0368511 | 50.000 | 54 | 27 | 0 | 55 | 108 | 50 | 103 | 7.44e-13 | 63.9 |
| Msa1177210 | MtrunA17_Chr7g0222601 | 48.148 | 54 | 28 | 0 | 55 | 108 | 16 | 69 | 2.88e-12 | 62.0 |
| Msa1177210 | MtrunA17_Chr1g0212831 | 42.857 | 63 | 36 | 0 | 55 | 117 | 11 | 73 | 5.34e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177210 | AT3G61700.1 | 59.229 | 363 | 78 | 8 | 1 | 297 | 1 | 359 | 9.41e-134 | 384 |
| Msa1177210 | AT3G61700.3 | 59.229 | 363 | 78 | 8 | 1 | 297 | 1 | 359 | 9.41e-134 | 384 |
| Msa1177210 | AT3G61700.2 | 58.424 | 368 | 78 | 8 | 1 | 297 | 1 | 364 | 2.20e-133 | 383 |
| Msa1177210 | AT2G46420.3 | 56.831 | 366 | 81 | 6 | 4 | 296 | 1 | 362 | 3.44e-132 | 380 |
| Msa1177210 | AT2G46420.1 | 56.831 | 366 | 81 | 6 | 4 | 296 | 1 | 362 | 3.44e-132 | 380 |
| Msa1177210 | AT3G61700.4 | 59.104 | 357 | 76 | 8 | 7 | 297 | 5 | 357 | 2.24e-131 | 377 |
| Msa1177210 | AT2G46420.2 | 56.522 | 345 | 76 | 4 | 4 | 277 | 1 | 342 | 6.58e-125 | 360 |
| Msa1177210 | AT3G10250.3 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.01e-43 | 151 |
| Msa1177210 | AT3G10250.2 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1177210 | AT3G10250.5 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1177210 | AT3G10250.1 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1177210 | AT3G10250.4 | 60.000 | 120 | 48 | 0 | 43 | 162 | 2 | 121 | 1.77e-43 | 151 |
| Msa1177210 | AT5G04090.6 | 53.906 | 128 | 59 | 0 | 34 | 161 | 10 | 137 | 3.12e-39 | 140 |
| Msa1177210 | AT5G04090.2 | 57.895 | 114 | 48 | 0 | 48 | 161 | 7 | 120 | 3.51e-39 | 140 |
| Msa1177210 | AT5G04090.4 | 52.174 | 92 | 44 | 0 | 70 | 161 | 1 | 92 | 5.85e-24 | 99.0 |
| Msa1177210 | AT5G04090.7 | 52.174 | 92 | 44 | 0 | 70 | 161 | 1 | 92 | 5.85e-24 | 99.0 |
| Msa1177210 | AT3G55240.1 | 40.000 | 85 | 39 | 1 | 34 | 118 | 1 | 73 | 7.80e-14 | 66.6 |
| Msa1177210 | AT2G29605.1 | 37.079 | 89 | 55 | 1 | 44 | 132 | 12 | 99 | 1.44e-12 | 67.8 |
| Msa1177210 | AT5G04090.3 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
| Msa1177210 | AT5G04090.5 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
| Msa1177210 | AT5G04090.1 | 46.377 | 69 | 37 | 0 | 93 | 161 | 11 | 79 | 2.55e-12 | 66.2 |
Find 113 sgRNAs with CRISPR-Local
Find 457 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGATATATCTATTATT+AGG | 0.161419 | 8_1:-9534024 | Msa1177210:three_prime_UTR |
| CTTTGAGGGGTTGCAGATTC+AGG | 0.199940 | 8_1:-9541409 | Msa1177210:five_prime_UTR |
| TTAGGTTAGGGAGAAAATTT+AGG | 0.243691 | 8_1:-9534198 | Msa1177210:three_prime_UTR |
| CTTGTTGCACATTAATTCTT+AGG | 0.275223 | 8_1:-9534216 | Msa1177210:three_prime_UTR |
| TGTAATTCATTTGATGCATT+TGG | 0.283357 | 8_1:-9533977 | Msa1177210:three_prime_UTR |
| GGCACCTTTCTATTAAATTC+TGG | 0.297711 | 8_1:+9538513 | None:intergenic |
| TTGAGATATATCTATTATTA+GGG | 0.298619 | 8_1:-9534023 | Msa1177210:three_prime_UTR |
| AGATGAAATTTATTCATATA+CGG | 0.304370 | 8_1:-9540495 | Msa1177210:five_prime_UTR |
| TTCAAGCAATGATAGCAAAA+AGG | 0.331651 | 8_1:-9538701 | Msa1177210:CDS |
| CTTTATTCATATATAATTGC+AGG | 0.333218 | 8_1:+9538492 | None:intergenic |
| CTTGAAAAGGATTGAAACTT+TGG | 0.335255 | 8_1:+9541529 | None:intergenic |
| CTTTCCTCCCCTTAAGTTGA+AGG | 0.350001 | 8_1:+9534242 | None:intergenic |
| ATTGTTTGGATGTTCACTCT+TGG | 0.355224 | 8_1:+9538768 | None:intergenic |
| AACTGAAATGAAGAACTTGC+AGG | 0.359277 | 8_1:-9540379 | Msa1177210:intron |
| TGCACATTAATTCTTAGGTT+AGG | 0.360279 | 8_1:-9534211 | Msa1177210:three_prime_UTR |
| GCATCAGTTGTGTGATTGTT+TGG | 0.373031 | 8_1:+9538754 | None:intergenic |
| GGGGTTGCAGATTCAGGAAC+TGG | 0.381072 | 8_1:-9541403 | Msa1177210:five_prime_UTR |
| TTGTTTGGATGTTCACTCTT+GGG | 0.381138 | 8_1:+9538769 | None:intergenic |
| AAATAGAGAAAAGTAAGAAA+TGG | 0.383301 | 8_1:+9541555 | None:intergenic |
| GCACATTAATTCTTAGGTTA+GGG | 0.384750 | 8_1:-9534210 | Msa1177210:three_prime_UTR |
| GGACCACAGTGCTCCTGATA+TGG | 0.385772 | 8_1:-9536270 | Msa1177210:CDS |
| GAAAATTATGCATCTTGAAA+AGG | 0.393092 | 8_1:+9541516 | None:intergenic |
| GAGGAGAAACCTTCAACTTA+AGG | 0.399945 | 8_1:-9534251 | Msa1177210:exon |
| GGAATCATTGGAGCCATATC+AGG | 0.405214 | 8_1:+9536257 | None:intergenic |
| ATTGGAGCCAATGGAACCTT+TGG | 0.405471 | 8_1:+9537741 | None:intergenic |
| TTCACTGCATCGGAAATATC+AGG | 0.412044 | 8_1:-9536158 | Msa1177210:CDS |
| CTACCTATATCCTGTTGATC+TGG | 0.413318 | 8_1:+9535230 | None:intergenic |
| GCTTGAATCTCCAGATCAAC+AGG | 0.418289 | 8_1:-9535240 | Msa1177210:CDS |
| TGGTTAAAACTCTACTGAAT+CGG | 0.422829 | 8_1:-9538463 | Msa1177210:CDS |
| TCTCCAGATCAACAGGATAT+AGG | 0.424911 | 8_1:-9535233 | Msa1177210:intron |
| AATAGAGAAAAGTAAGAAAT+GGG | 0.427492 | 8_1:+9541556 | None:intergenic |
| AGCCGCAGGTCAGCCTCATA+TGG | 0.443308 | 8_1:-9536993 | Msa1177210:CDS |
| TAAATTTATATATTGTTGCT+TGG | 0.443412 | 8_1:-9533947 | Msa1177210:three_prime_UTR |
| TTTACCTTAAACTTCTTCGT+GGG | 0.444112 | 8_1:-9541486 | Msa1177210:five_prime_UTR |
| ATCTAGCTTACTTGGCATGC+AGG | 0.445337 | 8_1:-9534159 | Msa1177210:three_prime_UTR |
| GCCACCGATGTTGGACTCAC+TGG | 0.445851 | 8_1:+9536200 | None:intergenic |
| TGCAGTTAACAATCTACCTA+TGG | 0.446046 | 8_1:-9537047 | Msa1177210:intron |
| CATACCAAGAGCTGTAAATC+CGG | 0.451036 | 8_1:+9538427 | None:intergenic |
| GATCCCGGATTTACAGCTCT+TGG | 0.457556 | 8_1:-9538431 | Msa1177210:intron |
| TCTTCATTTCAGTTGAAAGA+AGG | 0.458910 | 8_1:+9540388 | None:intergenic |
| TTTGCAGATCTTGGAGCTCT+AGG | 0.459587 | 8_1:-9535308 | Msa1177210:intron |
| TCCTCATCTGATTGAGAGCA+TGG | 0.469797 | 8_1:+9534269 | None:intergenic |
| GCTGAGCCTGAGTCTGCAAC+AGG | 0.471905 | 8_1:+9538730 | None:intergenic |
| GAAGAAGTTTAAGGTAAAGT+AGG | 0.474232 | 8_1:+9541491 | None:intergenic |
| ATGTCATCATCTAGCTTACT+TGG | 0.475503 | 8_1:-9534167 | Msa1177210:three_prime_UTR |
| AGGAGAAACCTTCAACTTAA+GGG | 0.477107 | 8_1:-9534250 | Msa1177210:exon |
| GGAGCCAATGGAACCTTTGG+AGG | 0.481798 | 8_1:+9537744 | None:intergenic |
| CCACTCGATGCCACCGATGT+TGG | 0.483016 | 8_1:+9536191 | None:intergenic |
| GAGAGGTGAAGACAGTGCTT+AGG | 0.483895 | 8_1:-9534001 | Msa1177210:three_prime_UTR |
| GGTTAAAACTCTACTGAATC+GGG | 0.484157 | 8_1:-9538462 | Msa1177210:CDS |
| GGGTGGATTCCATTCTGTAT+TGG | 0.484433 | 8_1:+9537723 | None:intergenic |
| CCATTCTGTATTGGAGCCAA+TGG | 0.484477 | 8_1:+9537732 | None:intergenic |
| GAAAAGGATTGAAACTTTGG+CGG | 0.487720 | 8_1:+9541532 | None:intergenic |
| ATATGAGGCTGACCTGCGGC+TGG | 0.488258 | 8_1:+9536995 | None:intergenic |
| TGGAGCTCTAGGAAACTATC+CGG | 0.489098 | 8_1:-9535297 | Msa1177210:CDS |
| ATAGGATGCTGCTGTAGTAC+TGG | 0.491737 | 8_1:+9537019 | None:intergenic |
| TCATTTCCCTTTCACTGCAT+CGG | 0.494611 | 8_1:-9536168 | Msa1177210:CDS |
| CAATGGAACCTTTGGAGGCA+TGG | 0.494839 | 8_1:+9537749 | None:intergenic |
| CTTTACCTTAAACTTCTTCG+TGG | 0.498114 | 8_1:-9541487 | Msa1177210:five_prime_UTR |
| CATGCCTCCAAAGGTTCCAT+TGG | 0.502362 | 8_1:-9537748 | Msa1177210:CDS |
| AGGTCCAGAATTTAATAGAA+AGG | 0.502568 | 8_1:-9538517 | Msa1177210:CDS |
| CAGCATCCTATGCCAGCCGC+AGG | 0.510852 | 8_1:-9537007 | Msa1177210:CDS |
| TCAGCCTCATATGGACTCCA+TGG | 0.515218 | 8_1:-9536984 | Msa1177210:CDS |
| AATGGAATCCACCCTATGCC+TGG | 0.520904 | 8_1:-9537714 | Msa1177210:intron |
| GCATCGGAAATATCAGGAAT+GGG | 0.521866 | 8_1:-9536152 | Msa1177210:CDS |
| TGCATCGGAAATATCAGGAA+TGG | 0.524609 | 8_1:-9536153 | Msa1177210:CDS |
| AATGGAACCTTTGGAGGCAT+GGG | 0.531912 | 8_1:+9537750 | None:intergenic |
| GGTTTATTGAAGCATGGTGA+TGG | 0.538713 | 8_1:-9536291 | Msa1177210:intron |
| AATATATTTCATTATTACTG+TGG | 0.546740 | 8_1:-9534094 | Msa1177210:three_prime_UTR |
| ATATATTATATAATAAGATA+CGG | 0.551325 | 8_1:+9534110 | None:intergenic |
| GATGCTCCTGTTGCAGACTC+AGG | 0.552659 | 8_1:-9538736 | Msa1177210:CDS |
| GGCTGACCTGCGGCTGGCAT+AGG | 0.554669 | 8_1:+9537001 | None:intergenic |
| GATATTTCCGATGCAGTGAA+AGG | 0.556620 | 8_1:+9536161 | None:intergenic |
| ATATTTCCGATGCAGTGAAA+GGG | 0.562015 | 8_1:+9536162 | None:intergenic |
| ATATATGAATAAAGATGAAG+TGG | 0.563348 | 8_1:-9538483 | Msa1177210:CDS |
| ATTCATATACGGTGGTGTGT+TGG | 0.565411 | 8_1:-9540484 | Msa1177210:five_prime_UTR |
| GTAAGAATTTACCAGGCATA+GGG | 0.565431 | 8_1:+9537703 | None:intergenic |
| GCAAACAATCTTGAGTTCAG+TGG | 0.577034 | 8_1:-9540453 | Msa1177210:five_prime_UTR |
| TTCAGCATTTAATTCTGATG+TGG | 0.577584 | 8_1:-9536108 | Msa1177210:CDS |
| GGTAAGAATTTACCAGGCAT+AGG | 0.578613 | 8_1:+9537702 | None:intergenic |
| GCAGTTAACAATCTACCTAT+GGG | 0.581803 | 8_1:-9537046 | Msa1177210:intron |
| AATCGGGCAAAGATAGATCC+CGG | 0.583846 | 8_1:-9538446 | Msa1177210:CDS |
| CCATTGGCTCCAATACAGAA+TGG | 0.587395 | 8_1:-9537732 | Msa1177210:CDS |
| ATGCCCATGGAGTCCATATG+AGG | 0.589725 | 8_1:+9536980 | None:intergenic |
| ATACCAAGAGCTGTAAATCC+GGG | 0.591106 | 8_1:+9538428 | None:intergenic |
| AGAATTTACCAGGCATAGGG+TGG | 0.592466 | 8_1:+9537706 | None:intergenic |
| TTACCTTAAACTTCTTCGTG+GGG | 0.596179 | 8_1:-9541485 | Msa1177210:five_prime_UTR |
| TACCTTAAACTTCTTCGTGG+GGG | 0.598485 | 8_1:-9541484 | Msa1177210:five_prime_UTR |
| GCTCCAATGATTCCACAAAA+CGG | 0.598722 | 8_1:-9536248 | Msa1177210:CDS |
| CTATACTGTAACCGAAGTGT+AGG | 0.601952 | 8_1:-9534136 | Msa1177210:three_prime_UTR |
| ACTCACTGGCATTTCTGAGA+CGG | 0.603360 | 8_1:+9536214 | None:intergenic |
| AGCAACATGTCTGAATCAGA+TGG | 0.604874 | 8_1:+9535260 | None:intergenic |
| ATATATCTATTATTAGGGAG+AGG | 0.605655 | 8_1:-9534018 | Msa1177210:three_prime_UTR |
| CAGCCTCATATGGACTCCAT+GGG | 0.606700 | 8_1:-9536983 | Msa1177210:CDS |
| GAAGTGTCCCATGCCTCCAA+AGG | 0.607338 | 8_1:-9537757 | Msa1177210:CDS |
| GCCAGTGAGTCCAACATCGG+TGG | 0.616717 | 8_1:-9536201 | Msa1177210:CDS |
| TGTAGTACTGGATATCCCAT+AGG | 0.618753 | 8_1:+9537031 | None:intergenic |
| AGTGTGGCAAAAGTTAGAAG+AGG | 0.618952 | 8_1:-9537877 | Msa1177210:CDS |
| GGAGAAACCTTCAACTTAAG+GGG | 0.620998 | 8_1:-9534249 | Msa1177210:exon |
| TCCATGCTCTCAATCAGATG+AGG | 0.630730 | 8_1:-9534270 | Msa1177210:CDS |
| GGAGCTCTAGGAAACTATCC+GGG | 0.632052 | 8_1:-9535296 | Msa1177210:CDS |
| ATTCAGGAACTGGGTATGTG+AGG | 0.637385 | 8_1:-9541393 | Msa1177210:intron |
| ATGACAACTTGACATGCCCA+TGG | 0.641314 | 8_1:+9536967 | None:intergenic |
| CCAACATCGGTGGCATCGAG+TGG | 0.649411 | 8_1:-9536191 | Msa1177210:CDS |
| GGGTTGCAGATTCAGGAACT+GGG | 0.651935 | 8_1:-9541402 | Msa1177210:five_prime_UTR |
| GAAACCTTCAACTTAAGGGG+AGG | 0.654911 | 8_1:-9534246 | Msa1177210:exon |
| TGAAATTTATTCATATACGG+TGG | 0.658844 | 8_1:-9540492 | Msa1177210:five_prime_UTR |
| AAATGAGAATAGTAGCAATG+AGG | 0.668739 | 8_1:+9541604 | None:intergenic |
| AATGCCAGTGAGTCCAACAT+CGG | 0.681951 | 8_1:-9536204 | Msa1177210:CDS |
| AGATACGGCTGCCTACACTT+CGG | 0.684656 | 8_1:+9534125 | None:intergenic |
| TCATCTGATTGAGAGCATGG+AGG | 0.698983 | 8_1:+9534272 | None:intergenic |
| GTCCATATGAGGCTGACCTG+CGG | 0.704335 | 8_1:+9536991 | None:intergenic |
| GAGCCATATCAGGAGCACTG+TGG | 0.761103 | 8_1:+9536267 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATGGAAAATAATATTT+TGG | - | chr8_1:9534958-9534977 | Msa1177210:intron | 10.0% |
| !! | TTCAAAATTATTAAAGAAAA+TGG | + | chr8_1:9535696-9535715 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAATACCTTT+CGG | - | chr8_1:9538468-9538487 | Msa1177210:CDS | 10.0% |
| !! | TTATCAAGTAAAATTAATAA+AGG | + | chr8_1:9541082-9541101 | None:intergenic | 10.0% |
| !!! | TATTTTGTTATTTCTTTTAA+AGG | + | chr8_1:9541182-9541201 | None:intergenic | 10.0% |
| !! | TTAAAAGAAATAACAAAATA+TGG | - | chr8_1:9541182-9541201 | Msa1177210:intron | 10.0% |
| !!! | TTTTTTACTTAAGATTCAAA+AGG | - | chr8_1:9534523-9534542 | Msa1177210:intron | 15.0% |
| !!! | TTTTTACTTAAGATTCAAAA+GGG | - | chr8_1:9534524-9534543 | Msa1177210:intron | 15.0% |
| !!! | TTTTTTTACCCTTTTTTATA+TGG | - | chr8_1:9534642-9534661 | Msa1177210:intron | 15.0% |
| !!! | TTTTCTAACCATATAAAAAA+GGG | + | chr8_1:9534653-9534672 | None:intergenic | 15.0% |
| !!! | TTTTTCTAACCATATAAAAA+AGG | + | chr8_1:9534654-9534673 | None:intergenic | 15.0% |
| !! | ATTAATGTCTACTATTATTA+TGG | - | chr8_1:9534685-9534704 | Msa1177210:intron | 15.0% |
| !!! | AATGTTCAATTTGTTATATA+TGG | - | chr8_1:9534943-9534962 | Msa1177210:intron | 15.0% |
| !! | AGATGAAATTTATTCATATA+CGG | - | chr8_1:9535145-9535164 | Msa1177210:intron | 15.0% |
| !!! | AAATAAACATAAAAGCATAT+AGG | - | chr8_1:9535654-9535673 | Msa1177210:intron | 15.0% |
| !!! | ATTTCAAGATATTTTGAAAA+TGG | - | chr8_1:9535729-9535748 | Msa1177210:intron | 15.0% |
| !!! | TATTTAATGCTTTGAAAAAT+TGG | - | chr8_1:9536175-9536194 | Msa1177210:CDS | 15.0% |
| !! | ATTAGAATGCAAAATATAAA+TGG | + | chr8_1:9537260-9537279 | None:intergenic | 15.0% |
| !!! | AAGTTTGTATTCATTTTTAA+AGG | + | chr8_1:9537705-9537724 | None:intergenic | 15.0% |
| !! | TCAAAAGTAATAAGATTTAT+TGG | + | chr8_1:9539052-9539071 | None:intergenic | 15.0% |
| !!! | TCAAAAGATACAAAATATTT+TGG | - | chr8_1:9540102-9540121 | Msa1177210:intron | 15.0% |
| !! | CATCAAAGTAATTAAAATTT+AGG | + | chr8_1:9540469-9540488 | None:intergenic | 15.0% |
| !! | TGAAAATTTCCTAAAAATAT+AGG | - | chr8_1:9541054-9541073 | Msa1177210:intron | 15.0% |
| !! | AGAATATGAAGAATATATTA+AGG | + | chr8_1:9541285-9541304 | None:intergenic | 15.0% |
| !! | AATATATTTCATTATTACTG+TGG | - | chr8_1:9541546-9541565 | Msa1177210:five_prime_UTR | 15.0% |
| !!! | TTTGAGATATATCTATTATT+AGG | - | chr8_1:9541616-9541635 | Msa1177210:five_prime_UTR | 15.0% |
| !! | TTGAGATATATCTATTATTA+GGG | - | chr8_1:9541617-9541636 | Msa1177210:five_prime_UTR | 15.0% |
| !! | TAAATTTATATATTGTTGCT+TGG | - | chr8_1:9541693-9541712 | Msa1177210:intron | 15.0% |
| !! | AATAGAGAAAAGTAAGAAAT+GGG | + | chr8_1:9534087-9534106 | None:intergenic | 20.0% |
| !! | AAATAGAGAAAAGTAAGAAA+TGG | + | chr8_1:9534088-9534107 | None:intergenic | 20.0% |
| !!! | TTTTTTTGCTTTTTTCTTTG+AGG | - | chr8_1:9534216-9534235 | Msa1177210:three_prime_UTR | 20.0% |
| !!! | TTTTTTGCTTTTTTCTTTGA+GGG | - | chr8_1:9534217-9534236 | Msa1177210:three_prime_UTR | 20.0% |
| !!! | TTTTGTTTATTTGGTTTCAA+TGG | - | chr8_1:9534550-9534569 | Msa1177210:intron | 20.0% |
| !!! | TTTTTTCTTTTTGTTGTTTG+AGG | - | chr8_1:9534589-9534608 | Msa1177210:intron | 20.0% |
| !!! | TTTTTCTTTTTGTTGTTTGA+GGG | - | chr8_1:9534590-9534609 | Msa1177210:intron | 20.0% |
| !! | AAAGTTCATGTTAAAAATTG+TGG | - | chr8_1:9534753-9534772 | Msa1177210:intron | 20.0% |
| !! | TGAATGAAAAAAATAGCTAT+TGG | - | chr8_1:9534817-9534836 | Msa1177210:intron | 20.0% |
| !! | TTCTCATATTTACTTTCATA+TGG | - | chr8_1:9534882-9534901 | Msa1177210:intron | 20.0% |
| !! | CATTTGAAAGCTTATTATAA+AGG | + | chr8_1:9534927-9534946 | None:intergenic | 20.0% |
| !!! | ATAATATTTTGGTGTACTAT+TGG | - | chr8_1:9534969-9534988 | Msa1177210:intron | 20.0% |
| !!! | TTCATTTTCTTTATCATATG+AGG | - | chr8_1:9535032-9535051 | Msa1177210:intron | 20.0% |
| !! | AAATTTAACGATTATTGAAG+CGG | - | chr8_1:9535086-9535105 | Msa1177210:intron | 20.0% |
| !! | CATTTCTATTATTAGTATTG+AGG | + | chr8_1:9535302-9535321 | None:intergenic | 20.0% |
| !! | TATTGTTCCTTTAAATATCT+AGG | - | chr8_1:9535327-9535346 | Msa1177210:intron | 20.0% |
| !!! | ACAAACTTTTAATGACAAAT+TGG | + | chr8_1:9535521-9535540 | None:intergenic | 20.0% |
| !! | TTGAAGTGAAAATGAAAATA+AGG | + | chr8_1:9535633-9535652 | None:intergenic | 20.0% |
| !! | ATTATTAAAGAAAATGGCAA+GGG | + | chr8_1:9535690-9535709 | None:intergenic | 20.0% |
| !! | AATTATTAAAGAAAATGGCA+AGG | + | chr8_1:9535691-9535710 | None:intergenic | 20.0% |
| !!! | CTAACAAAGTACTATAATTA+CGG | + | chr8_1:9536006-9536025 | None:intergenic | 20.0% |
| !! | GCATTAAATATGTACAAATT+AGG | + | chr8_1:9536165-9536184 | None:intergenic | 20.0% |
| !!! | GAACTAAATATACCTTTTTA+TGG | - | chr8_1:9536798-9536817 | Msa1177210:intron | 20.0% |
| !!! | AGTTTTTGGAATAAATCAAA+GGG | + | chr8_1:9537098-9537117 | None:intergenic | 20.0% |
| !!! | AAGTTTTTGGAATAAATCAA+AGG | + | chr8_1:9537099-9537118 | None:intergenic | 20.0% |
| !!! | TTTATTCCAAAAACTTTTGT+AGG | - | chr8_1:9537103-9537122 | Msa1177210:intron | 20.0% |
| !! | CTTTATTCATATATAATTGC+AGG | + | chr8_1:9537151-9537170 | None:intergenic | 20.0% |
| !! | ATATATGAATAAAGATGAAG+TGG | - | chr8_1:9537157-9537176 | Msa1177210:intron | 20.0% |
| !! | TGAAAAACTAGTATACATTT+AGG | - | chr8_1:9537313-9537332 | Msa1177210:intron | 20.0% |
| !! | AATTATATTACAAGAATGCA+TGG | + | chr8_1:9537681-9537700 | None:intergenic | 20.0% |
| !! | ACATAACATATATAACCATT+AGG | + | chr8_1:9538094-9538113 | None:intergenic | 20.0% |
| !! | AGTTCACTTTAATATAATCA+AGG | + | chr8_1:9538224-9538243 | None:intergenic | 20.0% |
| !! | CATGATAGTTTATAGAATTT+AGG | + | chr8_1:9538256-9538275 | None:intergenic | 20.0% |
| !!! | TATAGATTTTTCCAAATCTT+TGG | - | chr8_1:9538309-9538328 | Msa1177210:intron | 20.0% |
| !! | TAATAAGAACAATCTTGTAA+TGG | + | chr8_1:9538379-9538398 | None:intergenic | 20.0% |
| !!! | TTTTTAAAAAAGACTGCATA+AGG | + | chr8_1:9538453-9538472 | None:intergenic | 20.0% |
| !! | AGATACATAAAATGATATCA+TGG | + | chr8_1:9538789-9538808 | None:intergenic | 20.0% |
| !! | TGACAATTAAAAATGAATAG+AGG | - | chr8_1:9539234-9539253 | Msa1177210:intron | 20.0% |
| !! | GACAATTAAAAATGAATAGA+GGG | - | chr8_1:9539235-9539254 | Msa1177210:intron | 20.0% |
| !! | TCTCAAATATAAGCAAAAAA+TGG | - | chr8_1:9539762-9539781 | Msa1177210:intron | 20.0% |
| !! | AAACAAAATGTTGATGTATT+TGG | + | chr8_1:9539824-9539843 | None:intergenic | 20.0% |
| !!! | TATCAATTTCAAGTAAATGA+TGG | - | chr8_1:9540170-9540189 | Msa1177210:intron | 20.0% |
| !!! | ATAAAGGTTCCTATATTTTT+AGG | + | chr8_1:9541066-9541085 | None:intergenic | 20.0% |
| !!! | GGAGAGATATTTTTTGAAAA+GGG | + | chr8_1:9533985-9534004 | None:intergenic | 25.0% |
| ! | GAAAATTATGCATCTTGAAA+AGG | + | chr8_1:9534127-9534146 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTTTTTCTTTGAG+GGG | - | chr8_1:9534218-9534237 | Msa1177210:three_prime_UTR | 25.0% |
| !! | AGATCTTAAAGTTCCATTTT+TGG | - | chr8_1:9534295-9534314 | Msa1177210:CDS | 25.0% |
| !! | ATTTTTGTGTTTGATGCATT+TGG | - | chr8_1:9534332-9534351 | Msa1177210:intron | 25.0% |
| !! | TTTTTGTGTTTGATGCATTT+GGG | - | chr8_1:9534333-9534352 | Msa1177210:intron | 25.0% |
| !! | TAAAAAGTTTGTTCCTTTGA+AGG | - | chr8_1:9534379-9534398 | Msa1177210:intron | 25.0% |
| ! | CAAACAAAAATTTCCTTCAA+AGG | + | chr8_1:9534395-9534414 | None:intergenic | 25.0% |
| !!! | CTTTGAAGGAAATTTTTGTT+TGG | - | chr8_1:9534393-9534412 | Msa1177210:intron | 25.0% |
| !!! | AAAGGGTTGTTTTGTTTATT+TGG | - | chr8_1:9534541-9534560 | Msa1177210:intron | 25.0% |
| !!! | TTTTCTTTTTGTTGTTTGAG+GGG | - | chr8_1:9534591-9534610 | Msa1177210:intron | 25.0% |
| ! | AAAAAATAGCTATTGGAATG+TGG | - | chr8_1:9534824-9534843 | Msa1177210:intron | 25.0% |
| ! | TGAAATTTATTCATATACGG+TGG | - | chr8_1:9535148-9535167 | Msa1177210:intron | 25.0% |
| ! | GTTCAAACCTAGATATTTAA+AGG | + | chr8_1:9535337-9535356 | None:intergenic | 25.0% |
| ! | ATAAAAGATGACTTCATATG+TGG | + | chr8_1:9535481-9535500 | None:intergenic | 25.0% |
| !! | TTCATTTTAAATTGCTAGCA+AGG | + | chr8_1:9535852-9535871 | None:intergenic | 25.0% |
| ! | AAGTTGTTAATTTCGTTGTT+TGG | - | chr8_1:9535973-9535992 | Msa1177210:intron | 25.0% |
| ! | AGTTGTTAATTTCGTTGTTT+GGG | - | chr8_1:9535974-9535993 | Msa1177210:intron | 25.0% |
| !! | TGTTAGCATAATGAATTTTC+CGG | - | chr8_1:9536020-9536039 | Msa1177210:intron | 25.0% |
| !! | TGTTGAAGGGAAAATTTTAT+TGG | - | chr8_1:9536246-9536265 | Msa1177210:CDS | 25.0% |
| !!! | CAATTAATTTGTTTTCGTGT+TGG | + | chr8_1:9536325-9536344 | None:intergenic | 25.0% |
| ! | AAAACAAATTAATTGCAGCA+TGG | - | chr8_1:9536330-9536349 | Msa1177210:intron | 25.0% |
| ! | TGTTCTACAAATCCATAAAA+AGG | + | chr8_1:9536813-9536832 | None:intergenic | 25.0% |
| ! | TTATTTAATCCACAAGACAA+AGG | + | chr8_1:9537058-9537077 | None:intergenic | 25.0% |
| !! | AAATTCTTTAGAAGAGTCTA+TGG | + | chr8_1:9537500-9537519 | None:intergenic | 25.0% |
| !! | TGATGTTTAAGTTTATCTAC+TGG | + | chr8_1:9537537-9537556 | None:intergenic | 25.0% |
| !! | ATGCTTTTATTAATTCAGTG+TGG | - | chr8_1:9537747-9537766 | Msa1177210:CDS | 25.0% |
| !!! | CAATTTTAGTCTAACATAGT+AGG | + | chr8_1:9537810-9537829 | None:intergenic | 25.0% |
| ! | ATTGCAATATCATGTGTTAT+TGG | + | chr8_1:9538191-9538210 | None:intergenic | 25.0% |
| !! | ATTATATTTGGAGTGAAGTT+AGG | + | chr8_1:9538288-9538307 | None:intergenic | 25.0% |
| ! | GATTGTTCTTATTATGATAG+TGG | - | chr8_1:9538385-9538404 | Msa1177210:intron | 25.0% |
| ! | AGGAATATGAAGAAAAGATA+AGG | + | chr8_1:9538543-9538562 | None:intergenic | 25.0% |
| !! | CAAATGGTGTTAAAGAATAA+TGG | + | chr8_1:9538566-9538585 | None:intergenic | 25.0% |
| ! | ATATCATGGTATGATTTGAT+TGG | + | chr8_1:9538775-9538794 | None:intergenic | 25.0% |
| ! | CATTGTCATATAGATATTTG+TGG | + | chr8_1:9538812-9538831 | None:intergenic | 25.0% |
| ! | TATCTATATGACAATGTGAA+TGG | - | chr8_1:9538816-9538835 | Msa1177210:intron | 25.0% |
| !!! | TCCTTTTTAGTTGTCATTTT+AGG | - | chr8_1:9539003-9539022 | Msa1177210:intron | 25.0% |
| ! | TCCTAAAATGACAACTAAAA+AGG | + | chr8_1:9539007-9539026 | None:intergenic | 25.0% |
| !! | ATAAGATTTATTGGTTGTCT+TGG | + | chr8_1:9539043-9539062 | None:intergenic | 25.0% |
| !!! | ATTTCTCTCTGGAATAAATA+AGG | - | chr8_1:9539130-9539149 | Msa1177210:intron | 25.0% |
| !!! | TTTCTCTCTGGAATAAATAA+GGG | - | chr8_1:9539131-9539150 | Msa1177210:intron | 25.0% |
| ! | TTTGAAGACGATAAGTAAAT+AGG | - | chr8_1:9539190-9539209 | Msa1177210:intron | 25.0% |
| !!! | TTTTTGCTTATATTTGAGAC+CGG | + | chr8_1:9539761-9539780 | None:intergenic | 25.0% |
| !!! | TCAAAGAAAGTTGATGTATT+TGG | - | chr8_1:9539785-9539804 | Msa1177210:intron | 25.0% |
| !!! | GATGTATTTGGTTCAAATTT+TGG | + | chr8_1:9539812-9539831 | None:intergenic | 25.0% |
| ! | GCAAACTTAGAAATAGTTAA+TGG | + | chr8_1:9540133-9540152 | None:intergenic | 25.0% |
| ! | GAACATACAAAATCTTAAGT+AGG | + | chr8_1:9540225-9540244 | None:intergenic | 25.0% |
| ! | AGTCAAGTGTTTATATCATA+AGG | - | chr8_1:9540554-9540573 | Msa1177210:intron | 25.0% |
| !! | ACTTATTTGAGTTTATCTAC+TGG | + | chr8_1:9540771-9540790 | None:intergenic | 25.0% |
| !!! | TCAAATAAGTTGATTGAAAC+AGG | - | chr8_1:9540781-9540800 | Msa1177210:intron | 25.0% |
| !! | ATCTGTTGTTTATTCATCAA+CGG | + | chr8_1:9540869-9540888 | None:intergenic | 25.0% |
| ! | AACATATTACAAATTTCGCA+AGG | - | chr8_1:9540909-9540928 | Msa1177210:intron | 25.0% |
| ! | ACATATTACAAATTTCGCAA+GGG | - | chr8_1:9540910-9540929 | Msa1177210:intron | 25.0% |
| ! | ATATTTGTATATTCATCGTC+AGG | + | chr8_1:9541031-9541050 | None:intergenic | 25.0% |
| ! | ATATATCTATTATTAGGGAG+AGG | - | chr8_1:9541622-9541641 | Msa1177210:five_prime_UTR | 25.0% |
| ! | TGTAATTCATTTGATGCATT+TGG | - | chr8_1:9541663-9541682 | Msa1177210:intron | 25.0% |
| !!! | GAGATATTTTTTGAAAAGGG+TGG | + | chr8_1:9533982-9534001 | None:intergenic | 30.0% |
| !!! | GGGAGAGATATTTTTTGAAA+AGG | + | chr8_1:9533986-9534005 | None:intergenic | 30.0% |
| AAATGAGAATAGTAGCAATG+AGG | + | chr8_1:9534039-9534058 | None:intergenic | 30.0% | |
| CTTGAAAAGGATTGAAACTT+TGG | + | chr8_1:9534114-9534133 | None:intergenic | 30.0% | |
| ! | GAAGAAGTTTAAGGTAAAGT+AGG | + | chr8_1:9534152-9534171 | None:intergenic | 30.0% |
| TTTACCTTAAACTTCTTCGT+GGG | - | chr8_1:9534154-9534173 | Msa1177210:three_prime_UTR | 30.0% | |
| AACAACTCATGAACCAAAAA+TGG | + | chr8_1:9534311-9534330 | None:intergenic | 30.0% | |
| CTTCATTCACAATTTAGATC+TGG | - | chr8_1:9534440-9534459 | Msa1177210:intron | 30.0% | |
| GTTCATGTTAAAAATTGTGG+TGG | - | chr8_1:9534756-9534775 | Msa1177210:intron | 30.0% | |
| ! | TGTTAAAAATTGTGGTGGAA+TGG | - | chr8_1:9534761-9534780 | Msa1177210:intron | 30.0% |
| TTGGTTTACAATTCTCTCAT+TGG | - | chr8_1:9535110-9535129 | Msa1177210:intron | 30.0% | |
| TCTTCATTTCAGTTGAAAGA+AGG | + | chr8_1:9535255-9535274 | None:intergenic | 30.0% | |
| ! | TTAGTATTGAGGTGTATGAT+GGG | + | chr8_1:9535291-9535310 | None:intergenic | 30.0% |
| ! | ATTAGTATTGAGGTGTATGA+TGG | + | chr8_1:9535292-9535311 | None:intergenic | 30.0% |
| AACAAGCATACAATAAGTTG+AGG | + | chr8_1:9535359-9535378 | None:intergenic | 30.0% | |
| !! | CTTGTTATGCATTTTTCTGT+TGG | - | chr8_1:9535373-9535392 | Msa1177210:intron | 30.0% |
| ! | TTATGCATTTTTCTGTTGGA+AGG | - | chr8_1:9535377-9535396 | Msa1177210:intron | 30.0% |
| TAGATAAACACTATCCACAA+CGG | + | chr8_1:9535591-9535610 | None:intergenic | 30.0% | |
| ! | AACAATGTTATCGTTGTTTC+TGG | - | chr8_1:9535755-9535774 | Msa1177210:intron | 30.0% |
| ! | ATGAATTTTCCGGTAATACT+TGG | - | chr8_1:9536030-9536049 | Msa1177210:intron | 30.0% |
| ! | TTAGACAAGTTGAAATAGCT+AGG | + | chr8_1:9536117-9536136 | None:intergenic | 30.0% |
| ! | AAAGTATCACACATGTTGAA+GGG | - | chr8_1:9536233-9536252 | Msa1177210:CDS | 30.0% |
| GTTTCTGTTATAGTTTCTCT+AGG | + | chr8_1:9536573-9536592 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr8_1:9536602-9536621 | Msa1177210:intron | 30.0% | |
| ! | GTTGGCAATGTTTTCAATAT+TGG | - | chr8_1:9536678-9536697 | Msa1177210:intron | 30.0% |
| TTCAAGCAATGATAGCAAAA+AGG | - | chr8_1:9536939-9536958 | Msa1177210:intron | 30.0% | |
| ATGATAGCAAAAAGGTTTCA+CGG | - | chr8_1:9536947-9536966 | Msa1177210:intron | 30.0% | |
| AGGTCCAGAATTTAATAGAA+AGG | - | chr8_1:9537123-9537142 | Msa1177210:intron | 30.0% | |
| TGGTTAAAACTCTACTGAAT+CGG | - | chr8_1:9537177-9537196 | Msa1177210:intron | 30.0% | |
| TTAAACTGTTTATCCAGACA+GGG | + | chr8_1:9537339-9537358 | None:intergenic | 30.0% | |
| ATTAAACTGTTTATCCAGAC+AGG | + | chr8_1:9537340-9537359 | None:intergenic | 30.0% | |
| ACACGGAAAATCATTTATGA+GGG | + | chr8_1:9537567-9537586 | None:intergenic | 30.0% | |
| !! | TGTGTTATTTAGGTAAGACA+CGG | + | chr8_1:9537584-9537603 | None:intergenic | 30.0% |
| !! | TGGATAAACCTGTGTTATTT+AGG | + | chr8_1:9537594-9537613 | None:intergenic | 30.0% |
| ATAACACAGGTTTATCCAAT+TGG | - | chr8_1:9537596-9537615 | Msa1177210:intron | 30.0% | |
| TTGATTTCCATGTTACCAAT+TGG | + | chr8_1:9537614-9537633 | None:intergenic | 30.0% | |
| ! | AAAGCATCAATTACAAAGCA+AGG | + | chr8_1:9537734-9537753 | None:intergenic | 30.0% |
| TTCATTAAATATGACGAGAG+GGG | + | chr8_1:9537962-9537981 | None:intergenic | 30.0% | |
| CTTCATTAAATATGACGAGA+GGG | + | chr8_1:9537963-9537982 | None:intergenic | 30.0% | |
| ACTTCATTAAATATGACGAG+AGG | + | chr8_1:9537964-9537983 | None:intergenic | 30.0% | |
| AACAAGGTTTCTAAACCTAA+TGG | - | chr8_1:9538076-9538095 | Msa1177210:intron | 30.0% | |
| ! | AACTACAATCAATGCACTTT+TGG | - | chr8_1:9538117-9538136 | Msa1177210:intron | 30.0% |
| ACAATGACATCAATTGTTAG+AGG | + | chr8_1:9538145-9538164 | None:intergenic | 30.0% | |
| AACACATGATATTGCAATTG+TGG | - | chr8_1:9538193-9538212 | Msa1177210:intron | 30.0% | |
| TTCTTAACTGTCCAAAGATT+TGG | + | chr8_1:9538323-9538342 | None:intergenic | 30.0% | |
| AGAAAAGATAAGGCATAGAA+GGG | + | chr8_1:9538533-9538552 | None:intergenic | 30.0% | |
| AAGAAAAGATAAGGCATAGA+AGG | + | chr8_1:9538534-9538553 | None:intergenic | 30.0% | |
| ! | ATGGTGTTAAAGAATAATGG+AGG | + | chr8_1:9538563-9538582 | None:intergenic | 30.0% |
| ! | ATTTTATGCCTTGATCATTG+TGG | - | chr8_1:9538949-9538968 | Msa1177210:intron | 30.0% |
| ! | TCATTTCATCTATTTCTCTC+TGG | - | chr8_1:9539119-9539138 | Msa1177210:intron | 30.0% |
| TAAAAATGAATAGAGGGAGT+AGG | - | chr8_1:9539241-9539260 | Msa1177210:intron | 30.0% | |
| ATTTGTGGTTTATTGAAGCA+TGG | - | chr8_1:9539343-9539362 | Msa1177210:intron | 30.0% | |
| TTCAGCATTTAATTCTGATG+TGG | - | chr8_1:9539532-9539551 | Msa1177210:intron | 30.0% | |
| TAATTCTGATGTGGTAAGTT+CGG | - | chr8_1:9539541-9539560 | Msa1177210:intron | 30.0% | |
| AATAAATTACCTCCCAAGTT+TGG | + | chr8_1:9539665-9539684 | None:intergenic | 30.0% | |
| ! | CTTTTTAGATATATAGACCC+TGG | - | chr8_1:9539694-9539713 | Msa1177210:intron | 30.0% |
| TAATAAGCGCTTAACTAATC+TGG | + | chr8_1:9539728-9539747 | None:intergenic | 30.0% | |
| ! | AGTTACTTATATTTGAGACC+CGG | - | chr8_1:9539848-9539867 | Msa1177210:intron | 30.0% |
| AAAATCTTAAGTAGGATCCA+AGG | + | chr8_1:9540217-9540236 | None:intergenic | 30.0% | |
| TTGCGAAAATACATCATGAT+AGG | + | chr8_1:9540295-9540314 | None:intergenic | 30.0% | |
| GATTGTCAACTAAATCTTGT+AGG | + | chr8_1:9540504-9540523 | None:intergenic | 30.0% | |
| ATAAACACTTGACTATGTTG+TGG | + | chr8_1:9540548-9540567 | None:intergenic | 30.0% | |
| TCATTAGCTATTAGAGCTTA+TGG | - | chr8_1:9540666-9540685 | Msa1177210:intron | 30.0% | |
| GAAATTACTTTACCCTCTAT+AGG | + | chr8_1:9540844-9540863 | None:intergenic | 30.0% | |
| TATACTTACATCTTACCTTG+TGG | - | chr8_1:9541307-9541326 | Msa1177210:intron | 30.0% | |
| CTTGTTGCACATTAATTCTT+AGG | - | chr8_1:9541424-9541443 | Msa1177210:five_prime_UTR | 30.0% | |
| TGCACATTAATTCTTAGGTT+AGG | - | chr8_1:9541429-9541448 | Msa1177210:five_prime_UTR | 30.0% | |
| GCACATTAATTCTTAGGTTA+GGG | - | chr8_1:9541430-9541449 | Msa1177210:five_prime_UTR | 30.0% | |
| TTAGGTTAGGGAGAAAATTT+AGG | - | chr8_1:9541442-9541461 | Msa1177210:five_prime_UTR | 30.0% | |
| ! | TAAAATTTTGCAGAGTGACA+AGG | + | chr8_1:9541721-9541740 | None:intergenic | 30.0% |
| GAAAAGGATTGAAACTTTGG+CGG | + | chr8_1:9534111-9534130 | None:intergenic | 35.0% | |
| CTTTACCTTAAACTTCTTCG+TGG | - | chr8_1:9534153-9534172 | Msa1177210:three_prime_UTR | 35.0% | |
| TTACCTTAAACTTCTTCGTG+GGG | - | chr8_1:9534155-9534174 | Msa1177210:three_prime_UTR | 35.0% | |
| ACGTGATTATGTAACTGCAT+AGG | - | chr8_1:9535005-9535024 | Msa1177210:intron | 35.0% | |
| AACTGAAATGAAGAACTTGC+AGG | - | chr8_1:9535261-9535280 | Msa1177210:CDS | 35.0% | |
| AGATAAACACTATCCACAAC+GGG | + | chr8_1:9535590-9535609 | None:intergenic | 35.0% | |
| GAAAATGGCAAGGGAAATAT+AGG | + | chr8_1:9535681-9535700 | None:intergenic | 35.0% | |
| TGGAAGACAAGCTAGAAATA+AGG | + | chr8_1:9535786-9535805 | None:intergenic | 35.0% | |
| TTAAATTGCTAGCAAGGAGA+TGG | + | chr8_1:9535846-9535865 | None:intergenic | 35.0% | |
| !!! | CAGACTATTTTTGTAGCTGT+TGG | - | chr8_1:9535918-9535937 | Msa1177210:intron | 35.0% |
| TCCATTTCTCCAAGTATTAC+CGG | + | chr8_1:9536042-9536061 | None:intergenic | 35.0% | |
| !! | GAAAGTATCACACATGTTGA+AGG | - | chr8_1:9536232-9536251 | Msa1177210:CDS | 35.0% |
| TGACAACATTAGAGAGAGTT+AGG | - | chr8_1:9536418-9536437 | Msa1177210:intron | 35.0% | |
| GACAACATTAGAGAGAGTTA+GGG | - | chr8_1:9536419-9536438 | Msa1177210:intron | 35.0% | |
| ACCAATAGTAGAAAAGATGG+TGG | - | chr8_1:9536446-9536465 | Msa1177210:intron | 35.0% | |
| ! | TCCACCATCTTTTCTACTAT+TGG | + | chr8_1:9536450-9536469 | None:intergenic | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | - | chr8_1:9536454-9536473 | Msa1177210:intron | 35.0% |
| ! | ATAAGACTTGGTTGTTGAGT+TGG | - | chr8_1:9536660-9536679 | Msa1177210:intron | 35.0% |
| TTGTTTGGATGTTCACTCTT+GGG | + | chr8_1:9536874-9536893 | None:intergenic | 35.0% | |
| ATTGTTTGGATGTTCACTCT+TGG | + | chr8_1:9536875-9536894 | None:intergenic | 35.0% | |
| ! | CATTTTCTTCCTTTGTCTTG+TGG | - | chr8_1:9537046-9537065 | Msa1177210:intron | 35.0% |
| ! | TCTGGACCTACAAAAGTTTT+TGG | + | chr8_1:9537112-9537131 | None:intergenic | 35.0% |
| GGCACCTTTCTATTAAATTC+TGG | + | chr8_1:9537130-9537149 | None:intergenic | 35.0% | |
| GGTTAAAACTCTACTGAATC+GGG | - | chr8_1:9537178-9537197 | Msa1177210:intron | 35.0% | |
| AAATATAAATGGCATGCCTG+AGG | + | chr8_1:9537249-9537268 | None:intergenic | 35.0% | |
| !!! | GCTGTTTTAATGAGCTATTC+TGG | - | chr8_1:9537456-9537475 | Msa1177210:intron | 35.0% |
| GACACGGAAAATCATTTATG+AGG | + | chr8_1:9537568-9537587 | None:intergenic | 35.0% | |
| GTGTCTTACCTAAATAACAC+AGG | - | chr8_1:9537583-9537602 | Msa1177210:intron | 35.0% | |
| ! | GGTTTATCCAATTGGTAACA+TGG | - | chr8_1:9537604-9537623 | Msa1177210:intron | 35.0% |
| GTAAGAATTTACCAGGCATA+GGG | + | chr8_1:9537940-9537959 | None:intergenic | 35.0% | |
| ATGCTTCGATCCTGTTAAAA+GGG | + | chr8_1:9538053-9538072 | None:intergenic | 35.0% | |
| ATTGGATAACGCTTTCAATC+AGG | + | chr8_1:9538173-9538192 | None:intergenic | 35.0% | |
| CTTTGGACAGTTAAGAAGTT+TGG | - | chr8_1:9538326-9538345 | Msa1177210:intron | 35.0% | |
| CATAAGGCTCAAATATTCTC+AGG | + | chr8_1:9538437-9538456 | None:intergenic | 35.0% | |
| !! | TACCTTTCGGTGTTAAATGA+CGG | - | chr8_1:9538481-9538500 | Msa1177210:CDS | 35.0% |
| TTAACTGCACTGCAAACAAA+TGG | + | chr8_1:9538582-9538601 | None:intergenic | 35.0% | |
| TGCAGTTAACAATCTACCTA+TGG | - | chr8_1:9538593-9538612 | Msa1177210:intron | 35.0% | |
| GCAGTTAACAATCTACCTAT+GGG | - | chr8_1:9538594-9538613 | Msa1177210:intron | 35.0% | |
| ! | TCAAGTTGTCATGTGGTTAA+TGG | - | chr8_1:9538684-9538703 | Msa1177210:CDS | 35.0% |
| AGTAAAACCTAAGTGCATGA+CGG | + | chr8_1:9538975-9538994 | None:intergenic | 35.0% | |
| GACAACTAAAAAGGAACTGA+GGG | + | chr8_1:9538998-9539017 | None:intergenic | 35.0% | |
| TGACAACTAAAAAGGAACTG+AGG | + | chr8_1:9538999-9539018 | None:intergenic | 35.0% | |
| !! | AGTAATTTGCTCTGCATTTG+TGG | - | chr8_1:9539328-9539347 | Msa1177210:intron | 35.0% |
| ATATTTCCGATGCAGTGAAA+GGG | + | chr8_1:9539481-9539500 | None:intergenic | 35.0% | |
| AATCTGCGGTTAAATCTGAT+AGG | + | chr8_1:9539640-9539659 | None:intergenic | 35.0% | |
| TTAGATATATAGACCCTGGT+TGG | - | chr8_1:9539698-9539717 | Msa1177210:intron | 35.0% | |
| GGGTCTCAAATATAAGTAAC+TGG | + | chr8_1:9539849-9539868 | None:intergenic | 35.0% | |
| TACATAAGCACTTACTACTC+CGG | + | chr8_1:9539870-9539889 | None:intergenic | 35.0% | |
| ! | TTGTCCTCTGAAAAGAAGAA+TGG | - | chr8_1:9539983-9540002 | Msa1177210:intron | 35.0% |
| TAACAGTTCTCCACAGATAA+AGG | + | chr8_1:9540058-9540077 | None:intergenic | 35.0% | |
| !! | GCATTTTGAAAATCACACCT+TGG | - | chr8_1:9540197-9540216 | Msa1177210:intron | 35.0% |
| TCTGAATCAGATGGCAAAAA+TGG | + | chr8_1:9540374-9540393 | None:intergenic | 35.0% | |
| AGACTGTTTAAGAGAGCTTA+TGG | + | chr8_1:9540734-9540753 | None:intergenic | 35.0% | |
| GCTCTGTGAACAACTAAAAA+AGG | - | chr8_1:9540958-9540977 | Msa1177210:intron | 35.0% | |
| AGTGAATTGCTCATGCTAAA+GGG | + | chr8_1:9540991-9541010 | None:intergenic | 35.0% | |
| AAGTGAATTGCTCATGCTAA+AGG | + | chr8_1:9540992-9541011 | None:intergenic | 35.0% | |
| CCACTGAAATTAAAACCACA+AGG | + | chr8_1:9541325-9541344 | None:intergenic | 35.0% | |
| !!! | CCTTGTGGTTTTAATTTCAG+TGG | - | chr8_1:9541322-9541341 | Msa1177210:intron | 35.0% |
| AGGAGAAACCTTCAACTTAA+GGG | - | chr8_1:9541390-9541409 | Msa1177210:intron | 35.0% | |
| ! | ATGTCATCATCTAGCTTACT+TGG | - | chr8_1:9541473-9541492 | Msa1177210:five_prime_UTR | 35.0% |
| GAGAGAAATAGAGAGAGAGT+GGG | + | chr8_1:9534006-9534025 | None:intergenic | 40.0% | |
| AGAGAGAAATAGAGAGAGAG+TGG | + | chr8_1:9534007-9534026 | None:intergenic | 40.0% | |
| TACCTTAAACTTCTTCGTGG+GGG | - | chr8_1:9534156-9534175 | Msa1177210:three_prime_UTR | 40.0% | |
| TAACGATTATTGAAGCGGCT+TGG | - | chr8_1:9535091-9535110 | Msa1177210:intron | 40.0% | |
| ATTCATATACGGTGGTGTGT+TGG | - | chr8_1:9535156-9535175 | Msa1177210:intron | 40.0% | |
| GCAAACAATCTTGAGTTCAG+TGG | - | chr8_1:9535187-9535206 | Msa1177210:intron | 40.0% | |
| GCATAAGCATATGCTTTCTC+TGG | - | chr8_1:9535436-9535455 | Msa1177210:intron | 40.0% | |
| CAGTTGTGAAAGAGAGAAGA+TGG | + | chr8_1:9535806-9535825 | None:intergenic | 40.0% | |
| ! | TTTTTGTAGCTGTTGGCAAC+TGG | - | chr8_1:9535925-9535944 | Msa1177210:intron | 40.0% |
| TCCGGTAATACTTGGAGAAA+TGG | - | chr8_1:9536038-9536057 | Msa1177210:intron | 40.0% | |
| TGGAGAAATGGAAGTTTGTG+CGG | - | chr8_1:9536050-9536069 | Msa1177210:intron | 40.0% | |
| TTTGAAAAATTGGCGAGCGT+TGG | - | chr8_1:9536185-9536204 | Msa1177210:CDS | 40.0% | |
| TTGAAAAATTGGCGAGCGTT+GGG | - | chr8_1:9536186-9536205 | Msa1177210:CDS | 40.0% | |
| TTATTGGACGACTGTAAGAC+CGG | - | chr8_1:9536262-9536281 | Msa1177210:CDS | 40.0% | |
| ! | TGATGATGATGATGTTGCGT+TGG | - | chr8_1:9536360-9536379 | Msa1177210:intron | 40.0% |
| AACATTAGAGAGAGTTAGGG+TGG | - | chr8_1:9536422-9536441 | Msa1177210:intron | 40.0% | |
| GGCACCAATAGTAGAAAAGA+TGG | - | chr8_1:9536443-9536462 | Msa1177210:intron | 40.0% | |
| AAACTAGGCTTAGGTGGTTT+GGG | - | chr8_1:9536469-9536488 | Msa1177210:intron | 40.0% | |
| AGCTAGGAGAGTAGATCAAA+TGG | - | chr8_1:9536521-9536540 | Msa1177210:intron | 40.0% | |
| TAGGAGAGTAGATCAAATGG+AGG | - | chr8_1:9536524-9536543 | Msa1177210:intron | 40.0% | |
| AGGAGAGTAGATCAAATGGA+GGG | - | chr8_1:9536525-9536544 | Msa1177210:intron | 40.0% | |
| ! | AAGTCTTATCCCACTAGTTG+GGG | + | chr8_1:9536649-9536668 | None:intergenic | 40.0% |
| ! | CAAGTCTTATCCCACTAGTT+GGG | + | chr8_1:9536650-9536669 | None:intergenic | 40.0% |
| GCATCAGTTGTGTGATTGTT+TGG | + | chr8_1:9536889-9536908 | None:intergenic | 40.0% | |
| ATACCAAGAGCTGTAAATCC+GGG | + | chr8_1:9537215-9537234 | None:intergenic | 40.0% | |
| CATACCAAGAGCTGTAAATC+CGG | + | chr8_1:9537216-9537235 | None:intergenic | 40.0% | |
| AGCTCTTGGTATGCATCTTT+AGG | - | chr8_1:9537223-9537242 | Msa1177210:intron | 40.0% | |
| AGTGTGGCAAAAGTTAGAAG+AGG | - | chr8_1:9537763-9537782 | Msa1177210:CDS | 40.0% | |
| GGTAAGAATTTACCAGGCAT+AGG | + | chr8_1:9537941-9537960 | None:intergenic | 40.0% | |
| TTCGATCCTGTTAAAAGGGA+GGG | + | chr8_1:9538049-9538068 | None:intergenic | 40.0% | |
| CATGCTTCGATCCTGTTAAA+AGG | + | chr8_1:9538054-9538073 | None:intergenic | 40.0% | |
| CTTTCCTTTCTTGTCCTTGA+TGG | - | chr8_1:9538411-9538430 | Msa1177210:intron | 40.0% | |
| CAAATATTCTCAGGCCATCA+AGG | + | chr8_1:9538428-9538447 | None:intergenic | 40.0% | |
| ATCCGTCATTTAACACCGAA+AGG | + | chr8_1:9538486-9538505 | None:intergenic | 40.0% | |
| !! | TCGGTGTTAAATGACGGATT+AGG | - | chr8_1:9538487-9538506 | Msa1177210:CDS | 40.0% |
| ! | TGTAGTACTGGATATCCCAT+AGG | + | chr8_1:9538612-9538631 | None:intergenic | 40.0% |
| TTCCCAGAATTCATCCGAAT+GGG | + | chr8_1:9538735-9538754 | None:intergenic | 40.0% | |
| ATTCCCAGAATTCATCCGAA+TGG | + | chr8_1:9538736-9538755 | None:intergenic | 40.0% | |
| AATAGAGGGAGTAGGCTAAT+TGG | - | chr8_1:9539249-9539268 | Msa1177210:intron | 40.0% | |
| GTAGGCTAATTGGTTGAATG+CGG | - | chr8_1:9539259-9539278 | Msa1177210:intron | 40.0% | |
| GGTTTATTGAAGCATGGTGA+TGG | - | chr8_1:9539349-9539368 | Msa1177210:intron | 40.0% | |
| GCTCCAATGATTCCACAAAA+CGG | - | chr8_1:9539392-9539411 | Msa1177210:intron | 40.0% | |
| ! | GTACCGTTTTGTGGAATCAT+TGG | + | chr8_1:9539398-9539417 | None:intergenic | 40.0% |
| ! | GATGACATTGTACCGTTTTG+TGG | + | chr8_1:9539407-9539426 | None:intergenic | 40.0% |
| TCATTTCCCTTTCACTGCAT+CGG | - | chr8_1:9539472-9539491 | Msa1177210:intron | 40.0% | |
| GATATTTCCGATGCAGTGAA+AGG | + | chr8_1:9539482-9539501 | None:intergenic | 40.0% | |
| TTCACTGCATCGGAAATATC+AGG | - | chr8_1:9539482-9539501 | Msa1177210:intron | 40.0% | |
| TGCATCGGAAATATCAGGAA+TGG | - | chr8_1:9539487-9539506 | Msa1177210:intron | 40.0% | |
| GCATCGGAAATATCAGGAAT+GGG | - | chr8_1:9539488-9539507 | Msa1177210:intron | 40.0% | |
| AACCGCAGATTTACCAAACT+TGG | - | chr8_1:9539649-9539668 | Msa1177210:intron | 40.0% | |
| ACCGCAGATTTACCAAACTT+GGG | - | chr8_1:9539650-9539669 | Msa1177210:intron | 40.0% | |
| TCCCAAGTTTGGTAAATCTG+CGG | + | chr8_1:9539654-9539673 | None:intergenic | 40.0% | |
| CTAATCTGGTTAACCAACCA+GGG | + | chr8_1:9539714-9539733 | None:intergenic | 40.0% | |
| ACTAATCTGGTTAACCAACC+AGG | + | chr8_1:9539715-9539734 | None:intergenic | 40.0% | |
| CGCTTATTATATACTCCCTC+CGG | - | chr8_1:9539739-9539758 | Msa1177210:intron | 40.0% | |
| ! | TGCTTATATTTGAGACCGGA+GGG | + | chr8_1:9539757-9539776 | None:intergenic | 40.0% |
| ! | TTGCTTATATTTGAGACCGG+AGG | + | chr8_1:9539758-9539777 | None:intergenic | 40.0% |
| ACATAAGCACTTACTACTCC+GGG | + | chr8_1:9539869-9539888 | None:intergenic | 40.0% | |
| ! | TGCACCATTCTTCTTTTCAG+AGG | + | chr8_1:9539990-9540009 | None:intergenic | 40.0% |
| TCTGTGTGTTCCTTTATCTG+TGG | - | chr8_1:9540045-9540064 | Msa1177210:intron | 40.0% | |
| ! | TTGAAGTCTTAGAGCTTGCT+TGG | + | chr8_1:9540263-9540282 | None:intergenic | 40.0% |
| GTTGAACTCTTTGCAGATCT+TGG | - | chr8_1:9540323-9540342 | Msa1177210:intron | 40.0% | |
| AGCAACATGTCTGAATCAGA+TGG | + | chr8_1:9540383-9540402 | None:intergenic | 40.0% | |
| TCTCCAGATCAACAGGATAT+AGG | - | chr8_1:9540407-9540426 | Msa1177210:five_prime_UTR | 40.0% | |
| CTACCTATATCCTGTTGATC+TGG | + | chr8_1:9540413-9540432 | None:intergenic | 40.0% | |
| TTGTATTAGGTTCGGGATGT+AGG | - | chr8_1:9540817-9540836 | Msa1177210:intron | 40.0% | |
| GTGAATTGCTCATGCTAAAG+GGG | + | chr8_1:9540990-9541009 | None:intergenic | 40.0% | |
| GAGGAGAAACCTTCAACTTA+AGG | - | chr8_1:9541389-9541408 | Msa1177210:intron | 40.0% | |
| GGAGAAACCTTCAACTTAAG+GGG | - | chr8_1:9541391-9541410 | Msa1177210:intron | 40.0% | |
| CTATACTGTAACCGAAGTGT+AGG | - | chr8_1:9541504-9541523 | Msa1177210:five_prime_UTR | 40.0% | |
| CTGGGAGAGAAGAGAATTAC+AGG | + | chr8_1:9533917-9533936 | None:intergenic | 45.0% | |
| ! | GAGAGAACACAAGTGTTGCT+GGG | + | chr8_1:9533935-9533954 | None:intergenic | 45.0% |
| ! | AGAGAGAACACAAGTGTTGC+TGG | + | chr8_1:9533936-9533955 | None:intergenic | 45.0% |
| AACCCCCACGAAGAAGTTTA+AGG | + | chr8_1:9534161-9534180 | None:intergenic | 45.0% | |
| ATTCAGGAACTGGGTATGTG+AGG | - | chr8_1:9534247-9534266 | Msa1177210:exon | 45.0% | |
| GGAAGGATGCATTCATCGTA+AGG | - | chr8_1:9535394-9535413 | Msa1177210:intron | 45.0% | |
| ATGTTGTATGTGACCCGTTG+TGG | - | chr8_1:9535574-9535593 | Msa1177210:intron | 45.0% | |
| TAAGACCGGCGATGTTGTAT+GGG | - | chr8_1:9536276-9536295 | Msa1177210:CDS | 45.0% | |
| ATGATGTTGCGTTGGATGTG+TGG | - | chr8_1:9536368-9536387 | Msa1177210:intron | 45.0% | |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | chr8_1:9536460-9536479 | Msa1177210:intron | 45.0% |
| GAAACTAGGCTTAGGTGGTT+TGG | - | chr8_1:9536468-9536487 | Msa1177210:intron | 45.0% | |
| GGAGAGTAGATCAAATGGAG+GGG | - | chr8_1:9536526-9536545 | Msa1177210:intron | 45.0% | |
| ! | CCAAGTCTTATCCCACTAGT+TGG | + | chr8_1:9536651-9536670 | None:intergenic | 45.0% |
| CCAACTAGTGGGATAAGACT+TGG | - | chr8_1:9536648-9536667 | Msa1177210:intron | 45.0% | |
| GTTTGCATCACCACAAGAGT+AGG | + | chr8_1:9536721-9536740 | None:intergenic | 45.0% | |
| TAGCAAAAAGGTTTCACGGC+AGG | - | chr8_1:9536951-9536970 | Msa1177210:intron | 45.0% | |
| AATCGGGCAAAGATAGATCC+CGG | - | chr8_1:9537194-9537213 | Msa1177210:intron | 45.0% | |
| GTATACATTTAGGCCCTGTC+TGG | - | chr8_1:9537323-9537342 | Msa1177210:intron | 45.0% | |
| ! | AATGGAACCTTTGGAGGCAT+GGG | + | chr8_1:9537893-9537912 | None:intergenic | 45.0% |
| ATTGGAGCCAATGGAACCTT+TGG | + | chr8_1:9537902-9537921 | None:intergenic | 45.0% | |
| CCATTCTGTATTGGAGCCAA+TGG | + | chr8_1:9537911-9537930 | None:intergenic | 45.0% | |
| !! | CCATTGGCTCCAATACAGAA+TGG | - | chr8_1:9537908-9537927 | Msa1177210:intron | 45.0% |
| ! | GGGTGGATTCCATTCTGTAT+TGG | + | chr8_1:9537920-9537939 | None:intergenic | 45.0% |
| AGAATTTACCAGGCATAGGG+TGG | + | chr8_1:9537937-9537956 | None:intergenic | 45.0% | |
| GAGAGGGGTAAGAATTTACC+AGG | + | chr8_1:9537947-9537966 | None:intergenic | 45.0% | |
| TGTGTGTGCGTATTCACCTA+TGG | - | chr8_1:9538018-9538037 | Msa1177210:intron | 45.0% | |
| AAAAGGGAGGGTGATTCCAT+AGG | + | chr8_1:9538037-9538056 | None:intergenic | 45.0% | |
| ! | GAATCACCCTCCCTTTTAAC+AGG | - | chr8_1:9538040-9538059 | Msa1177210:intron | 45.0% |
| CTTCGATCCTGTTAAAAGGG+AGG | + | chr8_1:9538050-9538069 | None:intergenic | 45.0% | |
| AGGATCGAAGCATGAGAACA+AGG | - | chr8_1:9538060-9538079 | Msa1177210:intron | 45.0% | |
| ATAGGATGCTGCTGTAGTAC+TGG | + | chr8_1:9538624-9538643 | None:intergenic | 45.0% | |
| ATGACAACTTGACATGCCCA+TGG | + | chr8_1:9538676-9538695 | None:intergenic | 45.0% | |
| ACCCCATTCGGATGAATTCT+GGG | - | chr8_1:9538730-9538749 | Msa1177210:CDS | 45.0% | |
| TCCCAGAATTCATCCGAATG+GGG | + | chr8_1:9538734-9538753 | None:intergenic | 45.0% | |
| GGAATCATTGGAGCCATATC+AGG | + | chr8_1:9539386-9539405 | None:intergenic | 45.0% | |
| ! | ACTCACTGGCATTTCTGAGA+CGG | + | chr8_1:9539429-9539448 | None:intergenic | 45.0% |
| AATGCCAGTGAGTCCAACAT+CGG | - | chr8_1:9539436-9539455 | Msa1177210:intron | 45.0% | |
| TCTGATGTGGTAAGTTCGGT+TGG | - | chr8_1:9539545-9539564 | Msa1177210:intron | 45.0% | |
| GATCGCTGGATCAAATTCAG+TGG | - | chr8_1:9539606-9539625 | Msa1177210:intron | 45.0% | |
| GCAGATTTACCAAACTTGGG+AGG | - | chr8_1:9539653-9539672 | Msa1177210:intron | 45.0% | |
| TTTGCAGATCTTGGAGCTCT+AGG | - | chr8_1:9540332-9540351 | Msa1177210:intron | 45.0% | |
| !! | TGGAGCTCTAGGAAACTATC+CGG | - | chr8_1:9540343-9540362 | Msa1177210:intron | 45.0% |
| GATGGCAAAAATGGTGAACC+CGG | + | chr8_1:9540365-9540384 | None:intergenic | 45.0% | |
| GCTTGAATCTCCAGATCAAC+AGG | - | chr8_1:9540400-9540419 | Msa1177210:five_prime_UTR | 45.0% | |
| ATCCCGAACCTAATACAACC+TGG | + | chr8_1:9540815-9540834 | None:intergenic | 45.0% | |
| AGGGTTGCATTAGTGTCTTG+TGG | - | chr8_1:9540929-9540948 | Msa1177210:intron | 45.0% | |
| GTTGCATTAGTGTCTTGTGG+AGG | - | chr8_1:9540932-9540951 | Msa1177210:intron | 45.0% | |
| ATTGCTCATGCTAAAGGGGT+CGG | + | chr8_1:9540986-9541005 | None:intergenic | 45.0% | |
| ! | TCATCTGATTGAGAGCATGG+AGG | + | chr8_1:9541371-9541390 | None:intergenic | 45.0% |
| TCCATGCTCTCAATCAGATG+AGG | - | chr8_1:9541370-9541389 | Msa1177210:intron | 45.0% | |
| TCCTCATCTGATTGAGAGCA+TGG | + | chr8_1:9541374-9541393 | None:intergenic | 45.0% | |
| GAAACCTTCAACTTAAGGGG+AGG | - | chr8_1:9541394-9541413 | Msa1177210:five_prime_UTR | 45.0% | |
| !! | CTTTCCTCCCCTTAAGTTGA+AGG | + | chr8_1:9541401-9541420 | None:intergenic | 45.0% |
| ! | ATCTAGCTTACTTGGCATGC+AGG | - | chr8_1:9541481-9541500 | Msa1177210:five_prime_UTR | 45.0% |
| !! | AAAAATCTATATATTATATT+TGG | + | chr8_1:9538300-9538319 | None:intergenic | 5.0% |
| !! | ATATATTATATAATAAGATA+CGG | + | chr8_1:9541533-9541552 | None:intergenic | 5.0% |
| ! | CTTTGAGGGGTTGCAGATTC+AGG | - | chr8_1:9534231-9534250 | Msa1177210:three_prime_UTR | 50.0% |
| GGGTTGCAGATTCAGGAACT+GGG | - | chr8_1:9534238-9534257 | Msa1177210:exon | 50.0% | |
| GTAAGACCGGCGATGTTGTA+TGG | - | chr8_1:9536275-9536294 | Msa1177210:CDS | 50.0% | |
| TGTTGTATGGGACGGAGTGT+TGG | - | chr8_1:9536288-9536307 | Msa1177210:intron | 50.0% | |
| ! | GTTGTATGGGACGGAGTGTT+GGG | - | chr8_1:9536289-9536308 | Msa1177210:intron | 50.0% |
| GTTGCGTTGGATGTGTGGTA+AGG | - | chr8_1:9536373-9536392 | Msa1177210:intron | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+TGG | - | chr8_1:9536463-9536482 | Msa1177210:intron | 50.0% | |
| GGCATGTAGAGAGAAGACCT+GGG | - | chr8_1:9536490-9536509 | Msa1177210:intron | 50.0% | |
| GCATGTAGAGAGAAGACCTG+GGG | - | chr8_1:9536491-9536510 | Msa1177210:intron | 50.0% | |
| ! | GACCTGGGGATTTTGTAGCT+AGG | - | chr8_1:9536505-9536524 | Msa1177210:intron | 50.0% |
| CTCCTAGCTACAAAATCCCC+AGG | + | chr8_1:9536510-9536529 | None:intergenic | 50.0% | |
| GAGGGGAGTCAAATCACTAG+AGG | - | chr8_1:9536543-9536562 | Msa1177210:intron | 50.0% | |
| ATGTTGCTGACCCCAACTAG+TGG | - | chr8_1:9536636-9536655 | Msa1177210:intron | 50.0% | |
| TGTTGCTGACCCCAACTAGT+GGG | - | chr8_1:9536637-9536656 | Msa1177210:intron | 50.0% | |
| TGCCTTGCTTCCTACTCTTG+TGG | - | chr8_1:9536708-9536727 | Msa1177210:intron | 50.0% | |
| CACCACAAGAGTAGGAAGCA+AGG | + | chr8_1:9536713-9536732 | None:intergenic | 50.0% | |
| GATCCCGGATTTACAGCTCT+TGG | - | chr8_1:9537209-9537228 | Msa1177210:intron | 50.0% | |
| GGTATGCATCTTTAGGCCTC+AGG | - | chr8_1:9537230-9537249 | Msa1177210:intron | 50.0% | |
| ! | CAATGGAACCTTTGGAGGCA+TGG | + | chr8_1:9537894-9537913 | None:intergenic | 50.0% |
| CATGCCTCCAAAGGTTCCAT+TGG | - | chr8_1:9537892-9537911 | Msa1177210:intron | 50.0% | |
| AATGGAATCCACCCTATGCC+TGG | - | chr8_1:9537926-9537945 | Msa1177210:intron | 50.0% | |
| CAGGCCATCAAGGACAAGAA+AGG | + | chr8_1:9538418-9538437 | None:intergenic | 50.0% | |
| TCAGCCTCATATGGACTCCA+TGG | - | chr8_1:9538656-9538675 | Msa1177210:intron | 50.0% | |
| CAGCCTCATATGGACTCCAT+GGG | - | chr8_1:9538657-9538676 | Msa1177210:intron | 50.0% | |
| ATGCCCATGGAGTCCATATG+AGG | + | chr8_1:9538663-9538682 | None:intergenic | 50.0% | |
| ! | GGGCATGTCAAGTTGTCATG+TGG | - | chr8_1:9538677-9538696 | Msa1177210:intron | 50.0% |
| CGAATGGGGTGGAAATTGCT+CGG | + | chr8_1:9538720-9538739 | None:intergenic | 50.0% | |
| CGAGCAATTTCCACCCCATT+CGG | - | chr8_1:9538718-9538737 | Msa1177210:CDS | 50.0% | |
| CAGAATTCATCCGAATGGGG+TGG | + | chr8_1:9538731-9538750 | None:intergenic | 50.0% | |
| CACCCCATTCGGATGAATTC+TGG | - | chr8_1:9538729-9538748 | Msa1177210:CDS | 50.0% | |
| CATGACGGCCACAATGATCA+AGG | + | chr8_1:9538960-9538979 | None:intergenic | 50.0% | |
| ATTGTGGCCGTCATGCACTT+AGG | - | chr8_1:9538965-9538984 | Msa1177210:intron | 50.0% | |
| GGCTAATTGGTTGAATGCGG+AGG | - | chr8_1:9539262-9539281 | Msa1177210:intron | 50.0% | |
| ! | GAACGGGATTTCTAGATCGC+TGG | - | chr8_1:9539592-9539611 | Msa1177210:intron | 50.0% |
| !! | CTTGCTTGGTGTCGACAGAT+TGG | + | chr8_1:9540249-9540268 | None:intergenic | 50.0% |
| !! | GGAGCTCTAGGAAACTATCC+GGG | - | chr8_1:9540344-9540363 | Msa1177210:intron | 50.0% |
| CCTAATACAACCTGGCGCAT+TGG | + | chr8_1:9540807-9540826 | None:intergenic | 50.0% | |
| CCAATGCGCCAGGTTGTATT+AGG | - | chr8_1:9540804-9540823 | Msa1177210:intron | 50.0% | |
| GCGCCAGGTTGTATTAGGTT+CGG | - | chr8_1:9540809-9540828 | Msa1177210:intron | 50.0% | |
| CGCCAGGTTGTATTAGGTTC+GGG | - | chr8_1:9540810-9540829 | Msa1177210:intron | 50.0% | |
| TCGGGATGTAGGTCCTATAG+AGG | - | chr8_1:9540828-9540847 | Msa1177210:intron | 50.0% | |
| CGGGATGTAGGTCCTATAGA+GGG | - | chr8_1:9540829-9540848 | Msa1177210:intron | 50.0% | |
| AGATACGGCTGCCTACACTT+CGG | + | chr8_1:9541518-9541537 | None:intergenic | 50.0% | |
| GAGAGGTGAAGACAGTGCTT+AGG | - | chr8_1:9541639-9541658 | Msa1177210:intron | 50.0% | |
| GGGGTTGCAGATTCAGGAAC+TGG | - | chr8_1:9534237-9534256 | Msa1177210:exon | 55.0% | |
| !! | AAATTGGCGAGCGTTGGGCA+AGG | - | chr8_1:9536191-9536210 | Msa1177210:CDS | 55.0% |
| ACCGGCGATGTTGTATGGGA+CGG | - | chr8_1:9536280-9536299 | Msa1177210:CDS | 55.0% | |
| TCCGTCCCATACAACATCGC+CGG | + | chr8_1:9536284-9536303 | None:intergenic | 55.0% | |
| GGGCATGTAGAGAGAAGACC+TGG | - | chr8_1:9536489-9536508 | Msa1177210:intron | 55.0% | |
| GATGCTCCTGTTGCAGACTC+AGG | - | chr8_1:9536904-9536923 | Msa1177210:intron | 55.0% | |
| ! | GAAGTGTCCCATGCCTCCAA+AGG | - | chr8_1:9537883-9537902 | Msa1177210:intron | 55.0% |
| GGAGCCAATGGAACCTTTGG+AGG | + | chr8_1:9537899-9537918 | None:intergenic | 55.0% | |
| GTCCATATGAGGCTGACCTG+CGG | + | chr8_1:9538652-9538671 | None:intergenic | 55.0% | |
| !! | GGTGGAAATTGCTCGGTGCA+GGG | + | chr8_1:9538713-9538732 | None:intergenic | 55.0% |
| GGACCACAGTGCTCCTGATA+TGG | - | chr8_1:9539370-9539389 | Msa1177210:intron | 55.0% | |
| !! | GAGCCATATCAGGAGCACTG+TGG | + | chr8_1:9539376-9539395 | None:intergenic | 55.0% |
| TTGAAACAGGCCAATGCGCC+AGG | - | chr8_1:9540794-9540813 | Msa1177210:intron | 55.0% | |
| GCTGAGCCTGAGTCTGCAAC+AGG | + | chr8_1:9536913-9536932 | None:intergenic | 60.0% | |
| ATATGAGGCTGACCTGCGGC+TGG | + | chr8_1:9538648-9538667 | None:intergenic | 60.0% | |
| AGCCGCAGGTCAGCCTCATA+TGG | - | chr8_1:9538647-9538666 | Msa1177210:intron | 60.0% | |
| !! | GGGTGGAAATTGCTCGGTGC+AGG | + | chr8_1:9538714-9538733 | None:intergenic | 60.0% |
| GCCAGTGAGTCCAACATCGG+TGG | - | chr8_1:9539439-9539458 | Msa1177210:intron | 60.0% | |
| GCCACCGATGTTGGACTCAC+TGG | + | chr8_1:9539443-9539462 | None:intergenic | 60.0% | |
| CCACTCGATGCCACCGATGT+TGG | + | chr8_1:9539452-9539471 | None:intergenic | 60.0% | |
| ! | CCAACATCGGTGGCATCGAG+TGG | - | chr8_1:9539449-9539468 | Msa1177210:intron | 60.0% |
| GGTTGGACTGCAGCTTGCAC+CGG | - | chr8_1:9539562-9539581 | Msa1177210:intron | 60.0% | |
| GAAATCCCGTTCCCGCCATC+CGG | + | chr8_1:9539584-9539603 | None:intergenic | 60.0% | |
| CAGCATCCTATGCCAGCCGC+AGG | - | chr8_1:9538633-9538652 | Msa1177210:intron | 65.0% | |
| GGACTGCAGCTTGCACCGGA+TGG | - | chr8_1:9539566-9539585 | Msa1177210:intron | 65.0% | |
| CTGCAGCTTGCACCGGATGG+CGG | - | chr8_1:9539569-9539588 | Msa1177210:intron | 65.0% | |
| TGCAGCTTGCACCGGATGGC+GGG | - | chr8_1:9539570-9539589 | Msa1177210:intron | 65.0% | |
| !! | CTTGCACCGGATGGCGGGAA+CGG | - | chr8_1:9539575-9539594 | Msa1177210:intron | 65.0% |
| !! | TTGCACCGGATGGCGGGAAC+GGG | - | chr8_1:9539576-9539595 | Msa1177210:intron | 65.0% |
| GGCTGACCTGCGGCTGGCAT+AGG | + | chr8_1:9538642-9538661 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 9533889 | 9541773 | 9533889 | ID=Msa1177210;Name=Msa1177210 |
| chr8_1 | mRNA | 9533889 | 9541773 | 9533889 | ID=Msa1177210-mRNA-1;Parent=Msa1177210;Name=Msa1177210-mRNA-1;_AED=0.21;_eAED=0.21;_QI=397|0.77|0.8|1|0.77|0.7|10|364|299 |
| chr8_1 | exon | 9533889 | 9534320 | 9533889 | ID=Msa1177210-mRNA-1:exon:3268;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9535234 | 9535323 | 9535234 | ID=Msa1177210-mRNA-1:exon:3267;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9536105 | 9536301 | 9536105 | ID=Msa1177210-mRNA-1:exon:3266;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9536980 | 9537064 | 9536980 | ID=Msa1177210-mRNA-1:exon:3265;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9537715 | 9537897 | 9537715 | ID=Msa1177210-mRNA-1:exon:3264;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9538432 | 9538537 | 9538432 | ID=Msa1177210-mRNA-1:exon:3263;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9538678 | 9538833 | 9538678 | ID=Msa1177210-mRNA-1:exon:3262;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9540380 | 9540515 | 9540380 | ID=Msa1177210-mRNA-1:exon:3261;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9541394 | 9541641 | 9541394 | ID=Msa1177210-mRNA-1:exon:3260;Parent=Msa1177210-mRNA-1 |
| chr8_1 | exon | 9541746 | 9541773 | 9541746 | ID=Msa1177210-mRNA-1:exon:3259;Parent=Msa1177210-mRNA-1 |
| chr8_1 | five_prime_UTR | 9541746 | 9541773 | 9541746 | ID=Msa1177210-mRNA-1:five_prime_utr;Parent=Msa1177210-mRNA-1 |
| chr8_1 | five_prime_UTR | 9541394 | 9541641 | 9541394 | ID=Msa1177210-mRNA-1:five_prime_utr;Parent=Msa1177210-mRNA-1 |
| chr8_1 | five_prime_UTR | 9540395 | 9540515 | 9540395 | ID=Msa1177210-mRNA-1:five_prime_utr;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9540380 | 9540394 | 9540380 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9538678 | 9538833 | 9538678 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9538432 | 9538537 | 9538432 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9537715 | 9537897 | 9537715 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9536980 | 9537064 | 9536980 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9536105 | 9536301 | 9536105 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9535234 | 9535323 | 9535234 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | CDS | 9534253 | 9534320 | 9534253 | ID=Msa1177210-mRNA-1:cds;Parent=Msa1177210-mRNA-1 |
| chr8_1 | three_prime_UTR | 9533889 | 9534252 | 9533889 | ID=Msa1177210-mRNA-1:three_prime_utr;Parent=Msa1177210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
