AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1319110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1319110 MtrunA17_Chr8g0349341 91.237 194 15 1 1 192 1 194 5.59e-125 360
Msa1319110 MtrunA17_Chr8g0349341 91.026 78 7 0 192 269 288 365 1.05e-46 159
Msa1319110 MtrunA17_Chr8g0349321 77.523 218 39 2 1 216 1 210 4.05e-118 342
Msa1319110 MtrunA17_Chr8g0349321 87.179 78 10 0 192 269 288 365 5.53e-42 147
Msa1319110 MtrunA17_Chr8g0349301 82.474 194 31 2 1 192 1 193 6.32e-110 320
Msa1319110 MtrunA17_Chr8g0349301 93.750 32 2 0 192 223 287 318 9.41e-14 70.1
Msa1319110 MtrunA17_Chr8g0349331 68.394 193 29 2 1 192 1 162 2.12e-86 261
Msa1319110 MtrunA17_Chr8g0349331 87.179 78 10 0 192 269 256 333 1.65e-45 155
Msa1319110 MtrunA17_Chr8g0344931 59.278 194 66 4 12 192 7 200 9.83e-63 201
Msa1319110 MtrunA17_Chr8g0344931 51.948 77 27 2 192 268 294 360 3.58e-19 85.9
Msa1319110 MtrunA17_Chr8g0344941 52.105 190 84 3 10 192 15 204 6.05e-57 186
Msa1319110 MtrunA17_Chr8g0344941 48.101 79 39 1 192 268 297 375 1.20e-19 87.4
Msa1319110 MtrunA17_Chr2g0301641 56.364 165 64 4 35 192 43 206 3.23e-50 169
Msa1319110 MtrunA17_Chr2g0301641 48.684 76 39 0 192 267 300 375 8.35e-21 90.9
Msa1319110 MtrunA17_Chr4g0046151 36.649 191 109 6 6 191 12 195 6.22e-26 104
Msa1319110 MtrunA17_Chr5g0444401 29.050 358 144 13 10 266 11 359 7.16e-26 104
Msa1319110 MtrunA17_Chr7g0275021 36.269 193 102 7 13 191 16 201 1.14e-25 103
Msa1319110 MtrunA17_Chr7g0275011 40.936 171 84 6 35 191 34 201 2.14e-25 103
Msa1319110 MtrunA17_Chr7g0274991 41.243 177 87 8 11 177 8 177 2.45e-24 100
Msa1319110 MtrunA17_Chr1g0189891 38.674 181 96 7 10 178 4 181 2.65e-24 100
Msa1319110 MtrunA17_Chr3g0077571 39.873 158 91 2 19 174 14 169 3.41e-24 99.8
Msa1319110 MtrunA17_Chr1g0189931 46.309 149 70 7 35 177 32 176 4.81e-24 99.4
Msa1319110 MtrunA17_Chr1g0189931 29.851 134 77 4 146 267 234 362 8.80e-12 64.7
Msa1319110 MtrunA17_Chr3g0086641 39.011 182 100 6 1 174 1 179 5.28e-24 99.4
Msa1319110 MtrunA17_Chr5g0438631 33.333 222 122 9 7 216 3 210 5.91e-24 99.0
Msa1319110 MtrunA17_Chr3g0120861 39.306 173 90 7 35 195 38 207 6.29e-24 99.0
Msa1319110 MtrunA17_Chr2g0283531 39.011 182 93 8 5 173 2 178 7.17e-24 99.0
Msa1319110 MtrunA17_Chr5g0405821 38.150 173 96 6 6 172 18 185 1.00e-23 98.6
Msa1319110 MtrunA17_Chr5g0405831 44.444 144 72 5 35 172 43 184 1.67e-23 98.2
Msa1319110 MtrunA17_Chr1g0189901 45.455 154 72 8 30 177 28 175 2.30e-23 97.8
Msa1319110 MtrunA17_Chr1g0182811 45.033 151 70 8 35 177 33 178 3.38e-23 97.4
Msa1319110 MtrunA17_Chr4g0027521 35.838 173 99 6 9 176 6 171 4.92e-23 96.7
Msa1319110 MtrunA17_Chr2g0283191 35.417 192 113 6 7 190 11 199 8.82e-23 95.9
Msa1319110 MtrunA17_Chr4g0008851 43.421 152 76 6 32 177 29 176 1.94e-22 95.1
Msa1319110 MtrunA17_Chr2g0294301 35.294 170 94 5 35 191 35 201 5.69e-22 94.0
Msa1319110 MtrunA17_Chr5g0438621 35.321 218 114 10 15 216 6 212 6.28e-22 93.6
Msa1319110 MtrunA17_Chr4g0017431 32.738 168 102 4 10 173 11 171 8.98e-22 93.2
Msa1319110 MtrunA17_Chr3g0105401 40.541 148 80 6 35 177 28 172 1.44e-21 92.4
Msa1319110 MtrunA17_Chr4g0068441 39.583 144 80 4 35 174 35 175 2.33e-21 92.0
Msa1319110 MtrunA17_Chr3g0131321 34.328 201 112 7 9 191 5 203 2.37e-21 92.4
Msa1319110 MtrunA17_Chr6g0457921 41.892 148 75 6 37 177 31 174 3.87e-21 91.3
Msa1319110 MtrunA17_Chr5g0438641 35.052 194 103 8 35 216 32 214 4.87e-21 90.9
Msa1319110 MtrunA17_Chr8g0371491 40.559 143 78 5 35 172 36 176 1.04e-20 90.1
Msa1319110 MtrunA17_Chr5g0434621 32.642 193 112 7 11 191 6 192 1.18e-20 90.1
Msa1319110 MtrunA17_Chr2g0284941 35.714 168 94 5 36 191 34 199 1.19e-20 90.1
Msa1319110 MtrunA17_Chr2g0284951 36.310 168 93 5 36 191 34 199 2.20e-20 89.4
Msa1319110 MtrunA17_Chr5g0420811 34.896 192 107 9 31 216 29 208 3.47e-20 88.6
Msa1319110 MtrunA17_Chr7g0275001 41.026 156 82 6 28 177 18 169 3.78e-20 88.6
Msa1319110 MtrunA17_Chr7g0229591 36.782 174 90 8 6 173 12 171 6.83e-20 85.5
Msa1319110 MtrunA17_Chr3g0085231 37.143 175 101 7 8 175 2 174 7.60e-20 87.8
Msa1319110 MtrunA17_Chr8g0370981 36.111 180 98 7 8 174 17 192 8.03e-20 88.2
Msa1319110 MtrunA17_Chr6g0455661 43.548 124 64 2 1 124 1 118 1.01e-19 88.2
Msa1319110 MtrunA17_Chr8g0341001 39.474 152 76 8 35 177 32 176 1.21e-19 87.0
Msa1319110 MtrunA17_Chr8g0380031 38.732 142 82 3 36 174 85 224 2.64e-19 86.7
Msa1319110 MtrunA17_Chr1g0156891 36.413 184 105 8 10 185 16 195 3.13e-19 86.3
Msa1319110 MtrunA17_Chr3g0092131 33.136 169 99 5 37 192 25 192 3.89e-19 85.9
Msa1319110 MtrunA17_Chr2g0320671 34.104 173 102 6 10 177 9 174 3.99e-19 85.5
Msa1319110 MtrunA17_Chr7g0215961 33.632 223 108 11 7 205 6 212 4.38e-19 85.5
Msa1319110 MtrunA17_Chr7g0215961 33.000 100 60 2 170 267 256 350 1.41e-11 63.9
Msa1319110 MtrunA17_Chr3g0085881 37.500 168 90 5 36 191 34 198 5.00e-19 85.5
Msa1319110 MtrunA17_Chr2g0283501 35.326 184 102 6 1 173 1 178 5.32e-19 85.5
Msa1319110 MtrunA17_Chr2g0285061 36.250 160 96 4 19 174 16 173 5.64e-19 85.5
Msa1319110 MtrunA17_Chr2g0294311 34.444 180 93 7 9 174 14 182 6.06e-19 85.5
Msa1319110 MtrunA17_Chr4g0060811 31.395 172 104 5 34 192 26 196 6.13e-19 85.1
Msa1319110 MtrunA17_Chr3g0099161 37.748 151 82 4 35 174 92 241 6.61e-19 85.5
Msa1319110 MtrunA17_Chr1g0156901 35.294 187 105 8 5 185 25 201 6.78e-19 85.1
Msa1319110 MtrunA17_Chr3g0077581 34.286 210 108 9 4 191 2 203 7.64e-19 85.1
Msa1319110 MtrunA17_Chr1g0157001 37.410 139 79 5 40 172 41 177 2.08e-18 84.0
Msa1319110 MtrunA17_Chr3g0104821 40.000 155 76 9 29 172 40 188 2.50e-18 83.6
Msa1319110 MtrunA17_Chr3g0099151 38.411 151 81 4 35 174 87 236 2.67e-18 84.0
Msa1319110 MtrunA17_Chr2g0330781 38.158 152 78 8 35 177 31 175 2.75e-18 83.2
Msa1319110 MtrunA17_Chr3g0096551 36.410 195 103 9 10 191 7 193 2.98e-18 83.6
Msa1319110 MtrunA17_Chr5g0396511 37.063 143 83 4 37 174 48 188 3.76e-18 83.2
Msa1319110 MtrunA17_Chr2g0284991 34.857 175 104 5 4 174 6 174 4.60e-18 82.8
Msa1319110 MtrunA17_Chr1g0156911 32.979 188 115 7 35 216 37 219 5.86e-18 82.4
Msa1319110 MtrunA17_Chr8g0374101 34.043 188 102 9 1 174 4 183 5.93e-18 82.4
Msa1319110 MtrunA17_Chr2g0285001 33.929 168 98 5 36 191 34 200 1.07e-17 82.0
Msa1319110 MtrunA17_Chr2g0283481 38.158 152 79 6 35 173 47 196 1.65e-17 81.6
Msa1319110 MtrunA17_Chr8g0371481 34.320 169 97 7 35 191 41 207 1.75e-17 81.3
Msa1319110 MtrunA17_Chr5g0432101 30.409 171 110 6 10 174 8 175 2.00e-17 80.9
Msa1319110 MtrunA17_Chr0c01g0489571 36.735 196 99 10 10 195 7 187 2.24e-17 80.9
Msa1319110 MtrunA17_Chr0c01g0489581 36.735 196 99 10 10 195 7 187 2.52e-17 80.5
Msa1319110 MtrunA17_Chr8g0371471 33.929 168 98 7 35 191 41 206 2.86e-17 80.5
Msa1319110 MtrunA17_Chr2g0317271 38.728 173 89 8 10 172 7 172 3.15e-17 80.5
Msa1319110 MtrunA17_Chr2g0284921 35.294 170 94 6 36 191 35 202 3.84e-17 80.1
Msa1319110 MtrunA17_Chr2g0317261 38.728 173 89 8 10 172 7 172 4.10e-17 80.1
Msa1319110 MtrunA17_Chr1g0156931 35.417 192 105 9 1 180 9 193 6.12e-17 79.7
Msa1319110 MtrunA17_Chr3g0104801 41.406 128 61 7 29 146 40 163 6.41e-17 76.6
Msa1319110 MtrunA17_Chr2g0283511 38.926 149 73 6 40 173 36 181 7.22e-17 79.7
Msa1319110 MtrunA17_Chr3g0112821 33.796 216 117 9 5 204 2 207 1.01e-16 79.0
Msa1319110 MtrunA17_Chr8g0380041 35.928 167 92 6 37 191 33 196 1.23e-16 78.6
Msa1319110 MtrunA17_Chr1g0189921 41.463 123 61 5 35 149 31 150 1.49e-16 74.7
Msa1319110 MtrunA17_Chr3g0099231 34.054 185 102 7 1 174 1 176 1.77e-16 78.6
Msa1319110 MtrunA17_Chr6g0450701 36.842 152 80 3 32 172 36 182 6.38e-16 76.6
Msa1319110 MtrunA17_Chr1g0156921 37.500 152 84 6 26 172 37 182 6.57e-16 76.6
Msa1319110 MtrunA17_Chr3g0112691 39.744 156 76 8 30 174 25 173 6.83e-16 76.6
Msa1319110 MtrunA17_Chr2g0301541 39.597 149 73 6 35 172 34 176 8.61e-16 76.3
Msa1319110 MtrunA17_Chr2g0301581 39.597 149 73 6 35 172 34 176 9.39e-16 76.3
Msa1319110 MtrunA17_Chr7g0266061 39.583 144 65 7 36 173 43 170 2.46e-15 74.7
Msa1319110 MtrunA17_Chr7g0275291 32.609 184 103 6 1 173 1 174 3.04e-15 74.7
Msa1319110 MtrunA17_Chr3g0093031 33.155 187 109 6 30 204 25 207 3.19e-15 74.7
Msa1319110 MtrunA17_Chr1g0160031 31.429 175 99 4 10 172 18 183 4.47e-15 74.3
Msa1319110 MtrunA17_Chr1g0159971 37.255 153 73 6 35 172 47 191 7.19e-15 73.9
Msa1319110 MtrunA17_Chr1g0191461 32.778 180 105 5 1 172 1 172 8.73e-15 73.6
Msa1319110 MtrunA17_Chr1g0160101 33.880 183 98 6 5 172 13 187 1.48e-14 72.8
Msa1319110 MtrunA17_Chr6g0450721 31.795 195 110 6 8 191 11 193 1.80e-14 72.4
Msa1319110 MtrunA17_Chr8g0370971 37.762 143 71 7 7 136 10 147 1.87e-14 69.3
Msa1319110 MtrunA17_Chr3g0106911 32.547 212 112 13 65 254 7 209 2.42e-14 70.5
Msa1319110 MtrunA17_Chr7g0226931 32.738 168 82 4 30 172 33 194 2.53e-14 72.0
Msa1319110 MtrunA17_Chr1g0160011 34.667 150 81 4 35 172 40 184 2.70e-14 72.0
Msa1319110 MtrunA17_Chr1g0178931 37.037 162 84 7 36 191 38 187 2.96e-14 71.6
Msa1319110 MtrunA17_Chr8g0370951 30.601 183 110 7 1 172 1 177 4.63e-14 71.2
Msa1319110 MtrunA17_Chr2g0321991 41.837 98 51 4 30 123 28 123 5.93e-14 67.0
Msa1319110 MtrunA17_Chr4g0027561 40.336 119 52 7 6 119 12 116 8.40e-14 67.0
Msa1319110 MtrunA17_Chr1g0198351 35.000 140 77 5 34 173 42 167 8.88e-14 70.5
Msa1319110 MtrunA17_Chr7g0226941 35.669 157 78 5 35 175 33 182 9.96e-14 70.5
Msa1319110 MtrunA17_Chr1g0198381 35.374 147 78 6 34 177 1 133 1.12e-13 69.7
Msa1319110 MtrunA17_Chr7g0273101 33.129 163 93 5 20 172 16 172 1.38e-13 70.1
Msa1319110 MtrunA17_Chr7g0254461 32.955 176 97 6 32 191 40 210 1.44e-13 70.1
Msa1319110 MtrunA17_Chr7g0226911 32.258 155 85 4 32 172 32 180 1.73e-13 69.7
Msa1319110 MtrunA17_Chr2g0301591 37.143 140 71 5 35 161 34 169 2.75e-13 68.2
Msa1319110 MtrunA17_Chr8g0381581 32.680 153 80 3 35 172 40 184 3.45e-13 68.9
Msa1319110 MtrunA17_Chr8g0352901 32.955 176 94 7 11 172 6 171 5.56e-13 68.2
Msa1319110 MtrunA17_Chr8g0347751 32.692 156 82 4 36 173 37 187 7.91e-13 67.8
Msa1319110 MtrunA17_Chr1g0159981 32.667 150 84 3 35 172 46 190 2.13e-12 66.6
Msa1319110 MtrunA17_Chr6g0450711 36.184 152 75 4 35 172 122 265 2.19e-12 66.6
Msa1319110 MtrunA17_Chr6g0469511 36.842 114 65 4 35 143 30 141 2.55e-12 63.2
Msa1319110 MtrunA17_Chr6g0450731 32.124 193 104 8 8 189 11 187 5.61e-12 65.1
Msa1319110 MtrunA17_Chr1g0159991 33.143 175 96 6 10 172 15 180 1.07e-11 64.3
Msa1319110 MtrunA17_Chr8g0339251 34.940 166 90 6 11 172 6 157 1.51e-11 63.5
Msa1319110 MtrunA17_Chr4g0057991 29.530 149 92 3 36 173 40 186 2.98e-11 63.2
Msa1319110 MtrunA17_Chr1g0178941 35.417 144 74 6 36 173 41 171 4.71e-11 62.4
Msa1319110 MtrunA17_Chr5g0437421 28.966 145 96 4 35 174 32 174 5.11e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1319110 AT1G53920.1 52.604 192 80 4 12 192 19 210 1.91e-56 186
Msa1319110 AT1G53920.1 43.434 99 51 2 174 268 286 383 2.47e-20 89.7
Msa1319110 AT5G40990.1 54.872 195 73 6 12 192 9 202 2.74e-56 185
Msa1319110 AT5G40990.1 56.410 78 33 1 192 268 295 372 1.24e-22 96.3
Msa1319110 AT1G53940.1 46.847 222 93 6 11 216 8 220 4.90e-52 172
Msa1319110 AT1G53940.2 46.847 222 93 6 11 216 8 220 3.69e-51 172
Msa1319110 AT1G53940.2 50.000 78 38 1 192 268 297 374 6.07e-20 88.6
Msa1319110 AT3G14225.2 50.289 173 76 4 29 192 31 202 8.50e-47 160
Msa1319110 AT3G14225.2 51.282 78 37 1 192 268 295 372 5.21e-20 88.6
Msa1319110 AT3G14225.1 50.282 177 74 5 29 192 31 206 3.11e-46 159
Msa1319110 AT3G14225.1 51.282 78 37 1 192 268 299 376 4.65e-20 89.0
Msa1319110 AT1G53990.1 47.692 195 82 5 11 192 6 193 1.08e-44 155
Msa1319110 AT1G53990.1 51.282 78 37 1 192 268 286 363 1.35e-19 87.4
Msa1319110 AT5G15720.2 40.306 196 89 8 35 205 30 222 1.04e-26 106
Msa1319110 AT5G15720.1 41.899 179 87 7 35 199 30 205 2.28e-26 106
Msa1319110 AT5G18430.1 38.308 201 96 9 8 191 7 196 2.92e-26 105
Msa1319110 AT5G45960.1 39.645 169 87 7 35 191 47 212 1.37e-25 104
Msa1319110 AT1G71120.1 38.514 148 75 4 35 174 31 170 1.95e-25 103
Msa1319110 AT1G71120.1 42.667 75 39 2 192 266 285 355 6.06e-13 68.6
Msa1319110 AT2G19060.1 43.165 139 72 3 37 174 32 164 4.13e-25 102
Msa1319110 AT1G53970.2 60.526 76 30 0 29 104 14 89 8.68e-24 92.8
Msa1319110 AT1G53970.1 60.526 76 30 0 29 104 14 89 8.68e-24 92.8
Msa1319110 AT2G19050.2 42.553 141 70 5 37 174 33 165 1.08e-23 97.4
Msa1319110 AT2G19050.1 42.553 141 70 5 37 174 33 165 1.49e-23 98.2
Msa1319110 AT3G04290.1 44.295 149 73 6 35 177 29 173 2.93e-23 97.8
Msa1319110 AT4G26790.1 43.243 148 76 6 35 177 29 173 5.11e-23 97.1
Msa1319110 AT4G26790.2 43.243 148 76 6 35 177 29 173 5.11e-23 97.1
Msa1319110 AT2G40250.1 40.559 143 78 5 35 172 36 176 4.61e-22 94.4
Msa1319110 AT1G20132.1 39.860 143 79 5 35 172 61 201 5.53e-22 94.4
Msa1319110 AT4G16230.1 36.471 170 97 7 11 172 3 169 6.38e-22 92.0
Msa1319110 AT4G28780.1 42.667 150 74 7 35 177 31 175 7.93e-22 94.0
Msa1319110 AT5G08460.1 39.583 144 80 4 35 173 49 190 8.79e-22 94.0
Msa1319110 AT5G33370.2 36.170 188 104 6 18 191 12 197 9.67e-22 93.2
Msa1319110 AT5G33370.1 36.170 188 104 6 18 191 12 197 1.47e-21 93.2
Msa1319110 AT2G04570.1 36.364 198 106 8 10 195 8 197 1.71e-21 92.8
Msa1319110 AT4G30140.1 41.727 139 74 3 37 174 35 167 2.67e-21 92.0
Msa1319110 AT1G06990.1 39.456 147 76 6 35 173 37 178 1.12e-20 90.5
Msa1319110 AT1G28600.2 35.838 173 91 7 35 192 31 198 1.49e-20 87.8
Msa1319110 AT5G37690.1 34.320 169 94 6 37 191 29 194 1.50e-20 90.1
Msa1319110 AT2G03980.2 39.041 146 80 5 35 173 43 186 1.98e-20 89.7
Msa1319110 AT2G03980.3 39.041 146 80 5 35 173 43 186 1.98e-20 89.7
Msa1319110 AT2G03980.1 39.041 146 80 5 35 173 43 186 1.98e-20 89.7
Msa1319110 AT2G03980.4 39.041 146 80 5 35 173 43 186 1.98e-20 89.7
Msa1319110 AT2G19010.2 34.078 179 96 7 9 173 23 193 2.05e-20 90.1
Msa1319110 AT5G45950.1 36.129 155 93 4 35 185 40 192 2.67e-20 89.4
Msa1319110 AT2G19010.1 33.333 177 102 6 1 174 1 164 2.98e-20 89.4
Msa1319110 AT1G28650.1 31.863 204 121 8 1 191 7 205 3.48e-20 89.4
Msa1319110 AT1G28600.1 35.838 173 91 7 35 192 31 198 7.56e-20 88.6
Msa1319110 AT3G14820.1 40.000 170 86 8 35 193 32 196 1.65e-19 87.0
Msa1319110 AT5G41890.1 35.556 180 90 8 4 172 10 174 1.83e-19 87.4
Msa1319110 AT1G28590.1 33.908 174 101 6 11 173 12 182 4.31e-19 86.3
Msa1319110 AT2G42990.1 36.207 174 96 7 35 196 28 198 5.19e-19 85.9
Msa1319110 AT3G50400.1 33.889 180 108 6 4 174 3 180 5.70e-19 85.9
Msa1319110 AT5G42170.1 38.158 152 83 6 26 172 45 190 6.29e-19 85.5
Msa1319110 AT3G14210.1 36.806 144 77 5 33 174 34 165 7.79e-19 85.5
Msa1319110 AT2G27360.1 35.870 184 103 7 1 173 1 180 1.27e-18 85.1
Msa1319110 AT1G75920.2 36.000 200 101 9 10 195 12 198 1.62e-18 84.3
Msa1319110 AT1G20130.1 39.103 156 78 7 35 175 204 357 2.10e-18 85.1
Msa1319110 AT1G20130.2 39.103 156 78 7 35 175 184 337 2.12e-18 84.7
Msa1319110 AT3G43550.1 38.462 156 77 7 26 172 25 170 3.16e-18 82.8
Msa1319110 AT1G28660.1 33.505 194 106 6 1 178 1 187 3.28e-18 83.6
Msa1319110 AT1G28580.1 37.662 154 82 6 31 173 33 183 3.40e-18 84.0
Msa1319110 AT1G29670.1 32.843 204 117 8 1 191 1 197 3.49e-18 83.6
Msa1319110 AT1G28660.2 33.505 194 106 6 1 178 1 187 3.70e-18 83.6
Msa1319110 AT4G10950.2 35.862 145 86 4 35 174 71 213 5.01e-18 83.6
Msa1319110 AT4G18970.1 40.141 142 79 4 37 174 30 169 5.71e-18 82.8
Msa1319110 AT1G20135.1 32.759 174 99 8 35 194 29 198 6.34e-18 82.4
Msa1319110 AT5G45670.1 40.141 142 79 4 37 174 31 170 6.60e-18 82.8
Msa1319110 AT1G20120.1 37.063 143 83 5 35 172 78 218 7.01e-18 82.8
Msa1319110 AT1G31550.1 38.514 148 80 4 35 173 36 181 7.48e-18 82.8
Msa1319110 AT1G29670.2 32.843 204 117 8 1 191 69 265 7.48e-18 83.2
Msa1319110 AT1G31550.2 38.514 148 80 4 35 173 36 181 8.14e-18 82.8
Msa1319110 AT4G18970.2 40.141 142 79 4 37 174 30 169 8.20e-18 82.8
Msa1319110 AT3G43570.1 38.621 145 78 5 35 172 30 170 1.33e-17 81.3
Msa1319110 AT1G71691.3 39.161 143 82 3 35 174 55 195 1.59e-17 81.3
Msa1319110 AT1G71691.2 39.161 143 82 3 35 174 55 195 1.71e-17 81.6
Msa1319110 AT1G28670.1 32.367 207 120 9 1 191 1 203 1.92e-17 81.6
Msa1319110 AT1G29660.1 36.527 167 91 6 37 191 34 197 3.97e-17 80.5
Msa1319110 AT1G71250.1 35.417 144 87 3 35 174 41 182 4.08e-17 80.5
Msa1319110 AT1G74460.1 34.459 148 90 4 33 174 21 167 4.18e-17 80.5
Msa1319110 AT3G16370.1 38.312 154 75 9 35 177 30 174 6.70e-17 79.7
Msa1319110 AT1G75890.2 37.931 145 80 6 35 172 47 188 8.73e-17 79.7
Msa1319110 AT1G75890.3 37.931 145 80 6 35 172 76 217 1.18e-16 79.3
Msa1319110 AT5G63170.1 35.593 177 94 9 35 196 28 199 1.61e-16 78.6
Msa1319110 AT1G28640.1 33.898 177 88 7 35 191 35 202 1.83e-16 79.0
Msa1319110 AT1G58520.3 39.189 148 73 6 35 172 30 170 2.00e-16 78.2
Msa1319110 AT1G58525.1 39.189 148 73 6 35 172 30 170 2.00e-16 78.2
Msa1319110 AT1G28570.1 34.899 149 85 5 35 173 34 180 2.37e-16 78.6
Msa1319110 AT1G54030.2 35.252 139 77 5 36 174 53 178 3.06e-16 77.4
Msa1319110 AT1G54030.1 35.252 139 77 5 36 174 53 178 3.07e-16 78.2
Msa1319110 AT1G59406.1 40.000 145 76 7 35 172 30 170 3.66e-16 77.8
Msa1319110 AT1G59030.1 40.000 145 76 7 35 172 30 170 3.66e-16 77.8
Msa1319110 AT1G58725.1 40.000 145 76 7 35 172 30 170 3.66e-16 77.8
Msa1319110 AT2G23540.1 35.570 149 85 6 35 174 48 194 3.75e-16 77.8
Msa1319110 AT2G04020.1 38.776 147 80 6 35 173 43 187 3.89e-16 76.6
Msa1319110 AT2G04020.2 38.776 147 80 6 35 173 43 187 4.04e-16 77.4
Msa1319110 AT5G37690.2 32.143 168 91 6 37 191 29 186 4.54e-16 77.4
Msa1319110 AT2G24560.1 35.333 150 83 6 35 175 34 178 5.79e-16 77.0
Msa1319110 AT2G24560.2 35.333 150 83 6 35 175 34 178 7.51e-16 76.3
Msa1319110 AT5G45910.1 35.955 178 97 6 11 173 5 180 7.61e-16 77.0
Msa1319110 AT4G10950.1 35.172 145 83 5 35 174 71 209 9.20e-16 76.6
Msa1319110 AT1G75910.1 37.762 143 82 4 35 172 28 168 1.51e-15 75.9
Msa1319110 AT2G30310.1 34.932 146 89 5 35 175 34 178 1.73e-15 75.9
Msa1319110 AT3G48460.1 33.533 167 89 7 23 173 28 188 1.92e-15 75.9
Msa1319110 AT1G75920.1 33.491 212 105 9 10 195 7 208 1.98e-15 75.5
Msa1319110 AT1G58430.1 34.000 150 85 6 35 175 35 179 2.19e-15 75.5
Msa1319110 AT2G30220.1 32.558 172 104 6 15 175 7 177 2.27e-15 75.5
Msa1319110 AT3G09930.2 36.170 141 77 4 36 173 40 170 2.37e-15 75.5
Msa1319110 AT3G09930.1 36.170 141 77 4 36 173 40 170 2.37e-15 75.5
Msa1319110 AT1G54790.3 33.721 172 98 6 11 172 10 175 2.95e-15 75.1
Msa1319110 AT1G54000.1 33.526 173 98 8 7 174 4 164 3.49e-15 75.1
Msa1319110 AT1G33811.1 38.194 144 82 5 36 174 35 176 3.62e-15 75.1
Msa1319110 AT5G03610.1 32.778 180 98 6 5 173 6 173 4.68e-15 74.3
Msa1319110 AT1G28610.1 44.086 93 41 2 35 121 31 118 6.11e-15 72.8
Msa1319110 AT1G54020.2 32.370 173 95 8 9 174 3 160 6.80e-15 73.9
Msa1319110 AT5G03820.1 35.570 149 81 8 35 174 33 175 7.40e-15 73.9
Msa1319110 AT3G14220.1 32.886 149 88 6 27 174 24 161 1.01e-14 73.6
Msa1319110 AT5G03820.2 34.000 150 82 8 35 174 61 203 1.02e-14 73.6
Msa1319110 AT5G22810.1 34.416 154 84 9 35 177 34 181 2.93e-14 72.0
Msa1319110 AT1G28610.2 35.484 155 76 6 35 173 31 177 3.26e-14 72.0
Msa1319110 AT3G53100.1 31.034 145 93 4 35 174 29 171 3.92e-14 71.6
Msa1319110 AT1G75880.1 33.523 176 101 7 11 172 20 193 5.17e-14 71.6
Msa1319110 AT1G73610.1 37.584 149 75 7 35 172 35 176 5.37e-14 71.2
Msa1319110 AT1G75880.2 33.143 175 102 7 11 172 20 192 9.52e-14 70.9
Msa1319110 AT1G75900.1 32.738 168 104 6 12 172 18 183 1.28e-13 70.5
Msa1319110 AT1G54010.1 31.928 166 91 7 34 191 35 186 1.32e-13 70.5
Msa1319110 AT1G67830.1 35.333 150 80 6 35 172 30 174 3.29e-13 69.3
Msa1319110 AT3G26430.1 29.949 197 110 4 35 216 31 214 3.65e-13 68.9
Msa1319110 AT5G03810.1 31.293 147 90 5 35 174 30 172 3.66e-13 68.9
Msa1319110 AT3G62280.2 36.620 142 77 5 64 196 61 198 4.41e-13 68.2
Msa1319110 AT3G62280.1 36.620 142 77 5 64 196 61 198 4.98e-13 68.6
Msa1319110 AT4G01130.1 31.977 172 98 5 35 192 34 200 1.32e-12 67.4
Msa1319110 AT4G01130.2 31.977 172 98 5 35 192 34 200 1.68e-12 67.0
Msa1319110 AT4G16220.1 45.455 99 47 5 27 121 21 116 1.91e-12 65.9
Msa1319110 AT2G31540.1 33.108 148 89 5 35 175 35 179 4.30e-12 65.9
Msa1319110 AT5G55050.1 34.667 150 85 6 36 174 40 187 1.29e-11 64.7
Msa1319110 AT5G14450.1 32.911 158 81 5 35 175 41 190 1.80e-11 64.3
Msa1319110 AT1G23500.1 35.503 169 92 8 35 191 35 198 2.11e-11 63.9
Msa1319110 AT3G05180.1 33.133 166 91 7 20 172 21 179 2.60e-11 63.5
Msa1319110 AT1G75920.4 34.194 155 85 6 55 195 19 170 2.65e-11 63.2

Find 58 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTCCACTCCACATATAT+TGG 0.208033 8_4:-21335784 None:intergenic
AATAAATATGGCTGAATTAA+TGG 0.210671 8_4:-21331346 None:intergenic
CATGTTGCGTTATTTGTATT+TGG 0.249504 8_4:+21330829 Msa1319110:CDS
AGCTGGAGCTGGGGCCTTAA+TGG 0.280798 8_4:+21331411 Msa1319110:CDS
CAATACTACTGCTGATTATC+TGG 0.284780 8_4:+21330888 Msa1319110:CDS
TCCTTGATGGGTTTCCATTA+AGG 0.292122 8_4:-21331425 None:intergenic
AATAACGCAACATGTTCTTT+TGG 0.303876 8_4:-21330820 None:intergenic
GGAGATTCATTATTTGATAT+CGG 0.321455 8_4:+21330850 Msa1319110:CDS
TTGCTTGGGGATGAAGATAA+TGG 0.324336 8_4:+21330574 None:intergenic
ATTCAGCCATATTTATTTCC+TGG 0.329277 8_4:+21331352 Msa1319110:CDS
TCTATCTATATATATAATAT+TGG 0.338687 8_4:-21330641 None:intergenic
ATTTCCACTCCACATATATT+GGG 0.342945 8_4:-21335783 None:intergenic
TGAGAACCAGGAAATAAATA+TGG 0.364089 8_4:-21331358 None:intergenic
TCTACTCACCCTACTGAAAC+TGG 0.389950 8_4:+21335746 Msa1319110:CDS
GTTGATTAAGTAAACAGCTT+TGG 0.391709 8_4:-21333082 None:intergenic
TTGAAGAAGGTTTCACCATA+TGG 0.403375 8_4:-21330922 None:intergenic
ATATTCTTACCTATGAAATC+TGG 0.406113 8_4:-21330982 None:intergenic
CAACTGTAATATCCTCTGTA+TGG 0.426069 8_4:-21335656 None:intergenic
TAAAACAGACCAGTCCTTGA+TGG 0.436055 8_4:-21331438 None:intergenic
TGAAAAGGTTTGAAAGAAGC+AGG 0.440425 8_4:+21335611 Msa1319110:intron
TATATAATATTGGAAGTATG+AGG 0.450820 8_4:-21330631 None:intergenic
CGTGTCATTCCAGATTTCAT+AGG 0.463040 8_4:+21330973 Msa1319110:CDS
GGAGTGGCATGCTGTGGTAG+TGG 0.477898 8_4:+21335632 Msa1319110:CDS
ACCTTCTTCAAGTATCCATC+TGG 0.479315 8_4:+21330934 Msa1319110:CDS
GCTGTTTACTTAATCAACAT+TGG 0.479448 8_4:+21333087 Msa1319110:CDS
CTGGCAAATTACCCACCATA+TGG 0.493318 8_4:+21330907 Msa1319110:CDS
GGATTATTTCCCAATATATG+TGG 0.497938 8_4:+21335774 Msa1319110:CDS
ACCCTACTGAAACTGGTAGT+AGG 0.503783 8_4:+21335753 Msa1319110:CDS
GGTTCTCAACTATATATCAA+TGG 0.507572 8_4:+21331373 Msa1319110:CDS
AAAACAGACCAGTCCTTGAT+GGG 0.518468 8_4:-21331437 None:intergenic
TGAAGAAACCACATCTCTGC+TGG 0.521036 8_4:+21333059 Msa1319110:CDS
ACCAGATGGATACTTGAAGA+AGG 0.545031 8_4:-21330935 None:intergenic
GTTTACTTAATCAACATTGG+AGG 0.549518 8_4:+21333090 Msa1319110:CDS
AAATACGTATCCATGGTAGT+TGG 0.555951 8_4:+21333156 Msa1319110:CDS
GAATTAGCATTCCATAACAT+AGG 0.556966 8_4:-21330774 None:intergenic
TACAGAGGATATTACAGTTG+TGG 0.558522 8_4:+21335659 Msa1319110:CDS
ATCCTACTACCAGTTTCAGT+AGG 0.562625 8_4:-21335755 None:intergenic
AACGTATTGAGGCAGAAACT+AGG 0.562730 8_4:+21333033 Msa1319110:CDS
AAACATATGTTACCAAGTGT+TGG 0.574366 8_4:-21330796 None:intergenic
GGAATGCTAATTCCAACACT+TGG 0.575060 8_4:+21330784 Msa1319110:CDS
AGCTTTGGCCAGCAGAGATG+TGG 0.576046 8_4:-21333067 None:intergenic
AAGAAGGTTTCACCATATGG+TGG 0.576872 8_4:-21330919 None:intergenic
AACTGTAATATCCTCTGTAT+GGG 0.576942 8_4:-21335655 None:intergenic
GCCTTAATGGAAACCCATCA+AGG 0.582593 8_4:+21331424 Msa1319110:CDS
TCAAAGAACAAATATTCAGA+AGG 0.585525 8_4:-21335722 None:intergenic
AATGGAAACCCATCAAGGAC+TGG 0.588507 8_4:+21331429 Msa1319110:CDS
TTGATATATAGTTGAGAACC+AGG 0.593545 8_4:-21331370 None:intergenic
ATTTCCCAATATATGTGGAG+TGG 0.596347 8_4:+21335779 Msa1319110:CDS
TCCTACTACCAGTTTCAGTA+GGG 0.598502 8_4:-21335754 None:intergenic
AGAATGTCAAGAACGTATTG+AGG 0.601494 8_4:+21333022 Msa1319110:CDS
CCATCAGAAAATCTACCAGA+TGG 0.603978 8_4:-21330949 None:intergenic
AGTGGAAATCAAAGTATCAC+CGG 0.606433 8_4:+21335797 Msa1319110:CDS
AGAAGGTTTCACCATATGGT+GGG 0.608192 8_4:-21330918 None:intergenic
AGGTTTGAAAGAAGCAGGAG+TGG 0.636959 8_4:+21335616 Msa1319110:intron
AGTAAGATTACCAACTACCA+TGG 0.638643 8_4:-21333166 None:intergenic
AGAGGATATTACAGTTGTGG+AGG 0.638747 8_4:+21335662 Msa1319110:CDS
GAAGCAGGAGTGGCATGCTG+TGG 0.644819 8_4:+21335626 Msa1319110:CDS
TGTGGTAGTGGCCCATACAG+AGG 0.687434 8_4:+21335644 Msa1319110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAATAAT+TGG + chr8_4:21331531-21331550 Msa1319110:intron 0.0%
!! TCTATCTATATATATAATAT+TGG - chr8_4:21330644-21330663 None:intergenic 10.0%
!!! TTTATTTGTTAATTTAATGA+TGG + chr8_4:21331457-21331476 Msa1319110:intron 10.0%
!!! AAAAAACTAGATTTTAAAAA+AGG + chr8_4:21331594-21331613 Msa1319110:intron 10.0%
!!! AAAAACTAGATTTTAAAAAA+GGG + chr8_4:21331595-21331614 Msa1319110:intron 10.0%
!! ACTTATTTAAAAAGTAATTA+GGG + chr8_4:21333643-21333662 Msa1319110:intron 10.0%
!!! ATTTATAAAAATAAGTTGAA+AGG - chr8_4:21333721-21333740 None:intergenic 10.0%
!! TGTATATTAATAGAAAAATA+CGG - chr8_4:21333812-21333831 None:intergenic 10.0%
!!! TTATATTCAAATAAAAGTTT+TGG - chr8_4:21334690-21334709 None:intergenic 10.0%
!!! AAAAACAAAACAATTTTTTT+TGG + chr8_4:21335347-21335366 Msa1319110:intron 10.0%
!!! AAAACAAAACAATTTTTTTT+GGG + chr8_4:21335348-21335367 Msa1319110:intron 10.0%
!!! GGATTCTTTTTTTTTTTTTT+TGG - chr8_4:21330686-21330705 None:intergenic 15.0%
!!! ATCATTTTTGGTTATATTTT+GGG + chr8_4:21331195-21331214 Msa1319110:intron 15.0%
!! TTACGATAAAAGTTAAAATT+AGG - chr8_4:21331249-21331268 None:intergenic 15.0%
!! ATTATGCAGTAAATAAAAAA+TGG - chr8_4:21331728-21331747 None:intergenic 15.0%
!! TCTTTCTTTCAAAAAAAAAA+AGG + chr8_4:21332537-21332556 Msa1319110:intron 15.0%
!! CTTTCTTTCAAAAAAAAAAA+GGG + chr8_4:21332538-21332557 Msa1319110:intron 15.0%
!! GATTTATGTAAAAATTTATC+AGG + chr8_4:21332816-21332835 Msa1319110:intron 15.0%
!! AAATATAAATGCATAGTATT+TGG + chr8_4:21333258-21333277 Msa1319110:intron 15.0%
!!! TCAAAACATGTTTTAATTAT+GGG - chr8_4:21333620-21333639 None:intergenic 15.0%
!!! ATCAAAACATGTTTTAATTA+TGG - chr8_4:21333621-21333640 None:intergenic 15.0%
!! GACTTATTTAAAAAGTAATT+AGG + chr8_4:21333642-21333661 Msa1319110:intron 15.0%
!! TACTGTTAAAATCATTTAAT+TGG - chr8_4:21334776-21334795 None:intergenic 15.0%
!!! AATGTCATACTTTTTTTTTT+TGG - chr8_4:21334840-21334859 None:intergenic 15.0%
!!! GATATAATCAATTAATTTGA+TGG - chr8_4:21335008-21335027 None:intergenic 15.0%
!! TTAAACCTAAATTATAAGTT+AGG - chr8_4:21335067-21335086 None:intergenic 15.0%
!!! CAAAATTGACTATATTTTTA+AGG - chr8_4:21335104-21335123 None:intergenic 15.0%
!! ATAGTCCATAAAAAATATAA+CGG + chr8_4:21335127-21335146 Msa1319110:intron 15.0%
!!! AAGAATTCATAGTATTTTTA+AGG + chr8_4:21335408-21335427 Msa1319110:intron 15.0%
!!! TTATCTAATTCTAAAATTTG+TGG + chr8_4:21335575-21335594 Msa1319110:intron 15.0%
!!! TATATAATATTGGAAGTATG+AGG - chr8_4:21330634-21330653 None:intergenic 20.0%
!!! ATTTTTTTTCATCACTCAAA+CGG - chr8_4:21331026-21331045 None:intergenic 20.0%
!!! GCTGTTTTGATAAATTATTA+TGG - chr8_4:21331072-21331091 None:intergenic 20.0%
!!! GATCATTTTTGGTTATATTT+TGG + chr8_4:21331194-21331213 Msa1319110:intron 20.0%
!! AATAAATATGGCTGAATTAA+TGG - chr8_4:21331349-21331368 None:intergenic 20.0%
!!! TGCTTGTTAATTTTTTTAGT+TGG + chr8_4:21331482-21331501 Msa1319110:intron 20.0%
!! TAGTTGGTCAATAAAAAATT+TGG + chr8_4:21331498-21331517 Msa1319110:intron 20.0%
!!! TAGAATTTTGGATCTAAAAA+TGG - chr8_4:21331564-21331583 None:intergenic 20.0%
!! CAAAAGAACATTCAAATAAA+AGG - chr8_4:21331627-21331646 None:intergenic 20.0%
!! TAATAGTTTCAATACAATGT+GGG - chr8_4:21332494-21332513 None:intergenic 20.0%
!! ATAATAGTTTCAATACAATG+TGG - chr8_4:21332495-21332514 None:intergenic 20.0%
!! AATATAAATGTACAGTGTTT+AGG - chr8_4:21333380-21333399 None:intergenic 20.0%
!!! GTTCTTTTAGTTATAAGTAA+AGG + chr8_4:21333438-21333457 Msa1319110:intron 20.0%
!!! AAGTAAAACTTACATTTTCA+AGG + chr8_4:21333552-21333571 Msa1319110:intron 20.0%
!!! TATAAAAATAAGTTGAAAGG+AGG - chr8_4:21333718-21333737 None:intergenic 20.0%
!! AATATTATACATTGTCAACT+AGG - chr8_4:21333772-21333791 None:intergenic 20.0%
!! TTAAGATGTTTATTCAAACA+TGG + chr8_4:21334091-21334110 Msa1319110:intron 20.0%
!! ATGATAATAGTAGAAGATTT+AGG - chr8_4:21334117-21334136 None:intergenic 20.0%
!!! TCATTCCAATATTTAATTTC+AGG + chr8_4:21334153-21334172 Msa1319110:intron 20.0%
!!! CATTCCAATATTTAATTTCA+GGG + chr8_4:21334154-21334173 Msa1319110:intron 20.0%
!! TATTCCCTGAAATTAAATAT+TGG - chr8_4:21334161-21334180 None:intergenic 20.0%
!! AATTTAACAAAACAGATCAA+AGG + chr8_4:21334343-21334362 Msa1319110:intron 20.0%
!!! AAACTTGAGAAAATTTTCAA+TGG - chr8_4:21334588-21334607 None:intergenic 20.0%
!!! AAACTTGAGAAAATTTTCAA+TGG + chr8_4:21334588-21334607 Msa1319110:intron 20.0%
!! AAAAATAAATATGCCGTAAT+TGG - chr8_4:21334627-21334646 None:intergenic 20.0%
!!! TTCAAATAAAAGTTTTGGAA+TGG - chr8_4:21334685-21334704 None:intergenic 20.0%
!! AATTAAAGTTGTATGTATGT+CGG + chr8_4:21334717-21334736 Msa1319110:intron 20.0%
!!! GTAAAAGATTTGGTAAAAAA+AGG - chr8_4:21334970-21334989 None:intergenic 20.0%
!! AAATCATTTGATATGTGATT+TGG - chr8_4:21335030-21335049 None:intergenic 20.0%
!! AAGTACCTAACTTATAATTT+AGG + chr8_4:21335059-21335078 Msa1319110:intron 20.0%
!! TAGTCCATAAAAAATATAAC+GGG + chr8_4:21335128-21335147 Msa1319110:intron 20.0%
!!! ACAAAACAATTTTTTTTGAG+AGG - chr8_4:21335164-21335183 None:intergenic 20.0%
!! ATAATAGATTGTCATTACTT+GGG - chr8_4:21335257-21335276 None:intergenic 20.0%
!!! TAGTTTTTCAGAATACTCTT+CGG - chr8_4:21330707-21330726 None:intergenic 25.0%
!! TTCTGAAAAACTAACTTAGA+TGG + chr8_4:21330714-21330733 Msa1319110:intron 25.0%
!! GTAATTTTCTTCCTATGTTA+TGG + chr8_4:21330763-21330782 Msa1319110:CDS 25.0%
! GGAGATTCATTATTTGATAT+CGG + chr8_4:21330850-21330869 Msa1319110:CDS 25.0%
! ATATTCTTACCTATGAAATC+TGG - chr8_4:21330985-21331004 None:intergenic 25.0%
!! CCAATTTTTGCTTACATTTT+GGG - chr8_4:21331117-21331136 None:intergenic 25.0%
!! ACCAATTTTTGCTTACATTT+TGG - chr8_4:21331118-21331137 None:intergenic 25.0%
!! CAACTTATGTTGATCATTTT+TGG + chr8_4:21331183-21331202 Msa1319110:intron 25.0%
! ATCATGATCAGATTGTTAAT+TGG - chr8_4:21331296-21331315 None:intergenic 25.0%
! TTAGATCCAAAATTCTAGTA+AGG + chr8_4:21331567-21331586 Msa1319110:intron 25.0%
! TAGATCCAAAATTCTAGTAA+GGG + chr8_4:21331568-21331587 Msa1319110:intron 25.0%
! GGGATAACATAATAAATCAT+GGG - chr8_4:21332474-21332493 None:intergenic 25.0%
! TGGGATAACATAATAAATCA+TGG - chr8_4:21332475-21332494 None:intergenic 25.0%
! AAAAAAAAAGGGAACTCATA+TGG + chr8_4:21332549-21332568 Msa1319110:intron 25.0%
! TGTACTATAGAACACTATAT+TGG + chr8_4:21332696-21332715 Msa1319110:intron 25.0%
! TTAAAGGTTACTATCATAGA+GGG - chr8_4:21332850-21332869 None:intergenic 25.0%
! TTTAAAGGTTACTATCATAG+AGG - chr8_4:21332851-21332870 None:intergenic 25.0%
! ATAGTAACCTTTAAATCCAA+TGG + chr8_4:21332856-21332875 Msa1319110:intron 25.0%
! TTCCAAATAACTAAACAACT+CGG - chr8_4:21332884-21332903 None:intergenic 25.0%
! TATAGTGTTTATATGTTTCC+AGG + chr8_4:21332966-21332985 Msa1319110:intron 25.0%
!! CACTTCTCTATTTTATAATG+AGG + chr8_4:21333218-21333237 Msa1319110:intron 25.0%
!!! GATTTAGTCTTTTGAGAAAA+AGG - chr8_4:21333302-21333321 None:intergenic 25.0%
! TAAAATGAGAAAGTCTATCA+TGG - chr8_4:21333408-21333427 None:intergenic 25.0%
! ATTATCATGTAAGAAGTTGT+TGG + chr8_4:21333841-21333860 Msa1319110:intron 25.0%
!!! AAGTGGTTGTTGTATTTTAA+AGG - chr8_4:21334506-21334525 None:intergenic 25.0%
! AAAGAAACCAAATCCAATTA+CGG + chr8_4:21334611-21334630 Msa1319110:intron 25.0%
!! TGTCGGTGTAAAAAATTTTA+CGG + chr8_4:21334734-21334753 Msa1319110:intron 25.0%
!! ATCAATTAATTTGATGGCTT+AGG - chr8_4:21335002-21335021 None:intergenic 25.0%
!!! ACATCCCGTTATATTTTTTA+TGG - chr8_4:21335135-21335154 None:intergenic 25.0%
! ATGAACATAAAATAGTCGTT+AGG - chr8_4:21335195-21335214 None:intergenic 25.0%
! CATAATAGATTGTCATTACT+TGG - chr8_4:21335258-21335277 None:intergenic 25.0%
! AACAAAATATGGACATACAA+TGG - chr8_4:21335286-21335305 None:intergenic 25.0%
! CTTGACATTTGAACAAAATA+TGG - chr8_4:21335297-21335316 None:intergenic 25.0%
!! CATATTTTGTTCAAATGTCA+AGG + chr8_4:21335295-21335314 Msa1319110:intron 25.0%
!!! ACAAAACAATTTTTTTTGGG+AGG + chr8_4:21335351-21335370 Msa1319110:intron 25.0%
! CCAATATCATGTAAATTACA+GGG - chr8_4:21335451-21335470 None:intergenic 25.0%
! ACCAATATCATGTAAATTAC+AGG - chr8_4:21335452-21335471 None:intergenic 25.0%
!!! GATATTGGTTTTCAATTCAA+CGG + chr8_4:21335463-21335482 Msa1319110:intron 25.0%
! TCAAAGAACAAATATTCAGA+AGG - chr8_4:21335725-21335744 None:intergenic 25.0%
!!! ATAGAGTTTTGAGATTGTAA+GGG - chr8_4:21335823-21335842 None:intergenic 25.0%
!!! AATAGAGTTTTGAGATTGTA+AGG - chr8_4:21335824-21335843 None:intergenic 25.0%
GAATTAGCATTCCATAACAT+AGG - chr8_4:21330777-21330796 None:intergenic 30.0%
AAACATATGTTACCAAGTGT+TGG - chr8_4:21330799-21330818 None:intergenic 30.0%
! AATAACGCAACATGTTCTTT+TGG - chr8_4:21330823-21330842 None:intergenic 30.0%
CATGTTGCGTTATTTGTATT+TGG + chr8_4:21330829-21330848 Msa1319110:CDS 30.0%
!! TTTTTGCTTACATTTTGGGA+CGG - chr8_4:21331113-21331132 None:intergenic 30.0%
CCCAAAATGTAAGCAAAAAT+TGG + chr8_4:21331114-21331133 Msa1319110:intron 30.0%
ATTCAGCCATATTTATTTCC+TGG + chr8_4:21331352-21331371 Msa1319110:CDS 30.0%
TGAGAACCAGGAAATAAATA+TGG - chr8_4:21331361-21331380 None:intergenic 30.0%
TTGATATATAGTTGAGAACC+AGG - chr8_4:21331373-21331392 None:intergenic 30.0%
GGTTCTCAACTATATATCAA+TGG + chr8_4:21331373-21331392 Msa1319110:CDS 30.0%
! TTGATCCCTTACTAGAATTT+TGG - chr8_4:21331576-21331595 None:intergenic 30.0%
!!! CTGCTATTTTTTGGAGTTTA+TGG + chr8_4:21331776-21331795 Msa1319110:intron 30.0%
AGCATAGGAACCTTAAAATT+TGG + chr8_4:21331800-21331819 Msa1319110:intron 30.0%
GCATAGGAACCTTAAAATTT+GGG + chr8_4:21331801-21331820 Msa1319110:intron 30.0%
! CAACATTCTCCCAAATTTTA+AGG - chr8_4:21331813-21331832 None:intergenic 30.0%
TAAGTGATAGTAGTGTCTAT+TGG - chr8_4:21332657-21332676 None:intergenic 30.0%
GTCATTAAAATACGTTAACG+TGG + chr8_4:21332750-21332769 Msa1319110:intron 30.0%
ATCCGAGTTGTTTAGTTATT+TGG + chr8_4:21332879-21332898 Msa1319110:intron 30.0%
GTTGATTAAGTAAACAGCTT+TGG - chr8_4:21333085-21333104 None:intergenic 30.0%
GCTGTTTACTTAATCAACAT+TGG + chr8_4:21333087-21333106 Msa1319110:CDS 30.0%
GTTTACTTAATCAACATTGG+AGG + chr8_4:21333090-21333109 Msa1319110:CDS 30.0%
! TTTTTCATGAGTGTATAAGC+TGG - chr8_4:21333139-21333158 None:intergenic 30.0%
TCATGAAAAATACGTATCCA+TGG + chr8_4:21333149-21333168 Msa1319110:CDS 30.0%
ATTTGAGAATTCCTTAACCA+TGG + chr8_4:21333585-21333604 Msa1319110:intron 30.0%
TCAACTGTGTCAAGTAATAT+GGG + chr8_4:21333970-21333989 Msa1319110:intron 30.0%
GTAACTTACCAAATTTGGAA+GGG - chr8_4:21334423-21334442 None:intergenic 30.0%
CTTCCAAATTTGGTAAGTTA+CGG + chr8_4:21334422-21334441 Msa1319110:intron 30.0%
TTAAAGGTGGAGATTGAAAA+TGG - chr8_4:21334490-21334509 None:intergenic 30.0%
!! TGGTTGTTGTATTTTAAAGG+TGG - chr8_4:21334503-21334522 None:intergenic 30.0%
AAATATGCCGTAATTGGATT+TGG - chr8_4:21334621-21334640 None:intergenic 30.0%
AAATATGGACATACAATGGT+TGG - chr8_4:21335282-21335301 None:intergenic 30.0%
ATGCCAAAATTATGTCCATT+AGG + chr8_4:21335320-21335339 Msa1319110:intron 30.0%
TGCCAAAATTATGTCCATTA+GGG + chr8_4:21335321-21335340 Msa1319110:intron 30.0%
CCCTGTAATTTACATGATAT+TGG + chr8_4:21335448-21335467 Msa1319110:intron 30.0%
!! AACGGTGAGTTTTGTAATAT+AGG + chr8_4:21335481-21335500 Msa1319110:intron 30.0%
!! GGCTTAATTTGATGATGAAA+AGG + chr8_4:21335596-21335615 Msa1319110:intron 30.0%
AACTGTAATATCCTCTGTAT+GGG - chr8_4:21335658-21335677 None:intergenic 30.0%
GGATTATTTCCCAATATATG+TGG + chr8_4:21335774-21335793 Msa1319110:CDS 30.0%
ATTTCCACTCCACATATATT+GGG - chr8_4:21335786-21335805 None:intergenic 30.0%
!!! TTTTGGTGATGAATACGCTT+CGG - chr8_4:21330669-21330688 None:intergenic 35.0%
! CAATACTACTGCTGATTATC+TGG + chr8_4:21330888-21330907 Msa1319110:CDS 35.0%
TTGAAGAAGGTTTCACCATA+TGG - chr8_4:21330925-21330944 None:intergenic 35.0%
!! GTTCTTTTGCTATCCAAGTT+TGG + chr8_4:21331638-21331657 Msa1319110:intron 35.0%
! ATTGCTGCATTTTGAACTTC+AGG - chr8_4:21331682-21331701 None:intergenic 35.0%
TCAAAATGCAGCAATACACT+CGG + chr8_4:21331687-21331706 Msa1319110:intron 35.0%
TGCCAATGAATGTTCAACAA+CGG + chr8_4:21331749-21331768 Msa1319110:intron 35.0%
ATCCGTTGTTGAACATTCAT+TGG - chr8_4:21331754-21331773 None:intergenic 35.0%
!!! AACGGATTGCTGCTATTTTT+TGG + chr8_4:21331767-21331786 Msa1319110:intron 35.0%
! TTTGGAGTTTATGGAAGCAT+AGG + chr8_4:21331785-21331804 Msa1319110:intron 35.0%
! TGTTGATGAAAATAGTGCAC+AGG + chr8_4:21331828-21331847 Msa1319110:intron 35.0%
CTCGACATTTGATTGAAGAT+TGG + chr8_4:21331863-21331882 Msa1319110:intron 35.0%
! TTTTGATCAAGTTTATCCCG+TGG + chr8_4:21332182-21332201 Msa1319110:intron 35.0%
!! ATAAATCATGGGACTAGCTA+AGG - chr8_4:21332463-21332482 None:intergenic 35.0%
CTCATATGGTGAGTGAAAAA+TGG + chr8_4:21332563-21332582 Msa1319110:intron 35.0%
GTTCTATAGTACATCTGTCT+AGG - chr8_4:21332689-21332708 None:intergenic 35.0%
AGAATGTCAAGAACGTATTG+AGG + chr8_4:21333022-21333041 Msa1319110:CDS 35.0%
AAATACGTATCCATGGTAGT+TGG + chr8_4:21333156-21333175 Msa1319110:CDS 35.0%
AGTAAGATTACCAACTACCA+TGG - chr8_4:21333169-21333188 None:intergenic 35.0%
! TATAATGAGGCATTCTTGCA+TGG + chr8_4:21333231-21333250 Msa1319110:intron 35.0%
TAAAGGAGAATGTTAACTCC+TGG + chr8_4:21333455-21333474 Msa1319110:intron 35.0%
AAAGGAGAATGTTAACTCCT+GGG + chr8_4:21333456-21333475 Msa1319110:intron 35.0%
TCAACTAGGTCATCTATTGT+GGG - chr8_4:21333758-21333777 None:intergenic 35.0%
GTCAACTGTGTCAAGTAATA+TGG + chr8_4:21333969-21333988 Msa1319110:intron 35.0%
TTTCAGGGAATACATGAGAT+TGG + chr8_4:21334169-21334188 Msa1319110:intron 35.0%
ATTCTTAACCAACCATCTCT+TGG + chr8_4:21334208-21334227 Msa1319110:intron 35.0%
! TTTACAAATGCCTTGATGGT+TGG - chr8_4:21334241-21334260 None:intergenic 35.0%
! ACCATCAAGGCATTTGTAAA+TGG + chr8_4:21334241-21334260 Msa1319110:intron 35.0%
ACCATTTACAAATGCCTTGA+TGG - chr8_4:21334245-21334264 None:intergenic 35.0%
!! TAGTTTGGTGTTGTGTACTT+GGG - chr8_4:21334308-21334327 None:intergenic 35.0%
!! ATAGTTTGGTGTTGTGTACT+TGG - chr8_4:21334309-21334328 None:intergenic 35.0%
ATAAGCAACCCTTCCAAATT+TGG + chr8_4:21334412-21334431 Msa1319110:intron 35.0%
CGTAACTTACCAAATTTGGA+AGG - chr8_4:21334424-21334443 None:intergenic 35.0%
ACTTTCTCTCTCATGTTTGA+TGG + chr8_4:21334546-21334565 Msa1319110:intron 35.0%
! TCATGTTTGATGGTTGAGAT+TGG + chr8_4:21334556-21334575 Msa1319110:intron 35.0%
! TTGATGGTTGAGATTGGAAA+TGG + chr8_4:21334562-21334581 Msa1319110:intron 35.0%
!! GTCCCTAATGGACATAATTT+TGG - chr8_4:21335326-21335345 None:intergenic 35.0%
!!! GTTTTGTTTTTCGTCCCTAA+TGG - chr8_4:21335338-21335357 None:intergenic 35.0%
TGAAAAGGTTTGAAAGAAGC+AGG + chr8_4:21335611-21335630 Msa1319110:intron 35.0%
CAACTGTAATATCCTCTGTA+TGG - chr8_4:21335659-21335678 None:intergenic 35.0%
TACAGAGGATATTACAGTTG+TGG + chr8_4:21335659-21335678 Msa1319110:CDS 35.0%
ATTTCCCAATATATGTGGAG+TGG + chr8_4:21335779-21335798 Msa1319110:CDS 35.0%
GATTTCCACTCCACATATAT+TGG - chr8_4:21335787-21335806 None:intergenic 35.0%
! AGTGGAAATCAAAGTATCAC+CGG + chr8_4:21335797-21335816 Msa1319110:CDS 35.0%
GGAATGCTAATTCCAACACT+TGG + chr8_4:21330784-21330803 Msa1319110:CDS 40.0%
AGAAGGTTTCACCATATGGT+GGG - chr8_4:21330921-21330940 None:intergenic 40.0%
AAGAAGGTTTCACCATATGG+TGG - chr8_4:21330922-21330941 None:intergenic 40.0%
ACCTTCTTCAAGTATCCATC+TGG + chr8_4:21330934-21330953 Msa1319110:CDS 40.0%
ACCAGATGGATACTTGAAGA+AGG - chr8_4:21330938-21330957 None:intergenic 40.0%
CCATCAGAAAATCTACCAGA+TGG - chr8_4:21330952-21330971 None:intergenic 40.0%
! CCATCTGGTAGATTTTCTGA+TGG + chr8_4:21330949-21330968 Msa1319110:CDS 40.0%
! CGTGTCATTCCAGATTTCAT+AGG + chr8_4:21330973-21330992 Msa1319110:CDS 40.0%
!! TCCTTGATGGGTTTCCATTA+AGG - chr8_4:21331428-21331447 None:intergenic 40.0%
AAAACAGACCAGTCCTTGAT+GGG - chr8_4:21331440-21331459 None:intergenic 40.0%
TAAAACAGACCAGTCCTTGA+TGG - chr8_4:21331441-21331460 None:intergenic 40.0%
TTGAACTTCAGGCCAAATTC+CGG - chr8_4:21331671-21331690 None:intergenic 40.0%
ACTCAAGTGTAATGTAGACG+CGG + chr8_4:21332074-21332093 Msa1319110:intron 40.0%
AATGCATGTCTTGCATCCAT+TGG - chr8_4:21332242-21332261 None:intergenic 40.0%
AGGAGGAGGAAAAAATCTCA+CGG - chr8_4:21332365-21332384 None:intergenic 40.0%
CTCGGATCCATTGGATTTAA+AGG - chr8_4:21332866-21332885 None:intergenic 40.0%
ACTAAACAACTCGGATCCAT+TGG - chr8_4:21332875-21332894 None:intergenic 40.0%
AACGTATTGAGGCAGAAACT+AGG + chr8_4:21333033-21333052 Msa1319110:CDS 40.0%
AAGGAGAATGTTAACTCCTG+GGG + chr8_4:21333457-21333476 Msa1319110:intron 40.0%
ATTATGGGTCATGCTAACCA+TGG - chr8_4:21333605-21333624 None:intergenic 40.0%
GTCAACTAGGTCATCTATTG+TGG - chr8_4:21333759-21333778 None:intergenic 40.0%
CTGTGTCAAGTAATATGGGA+CGG + chr8_4:21333974-21333993 Msa1319110:intron 40.0%
TCAAGTAATATGGGACGGAA+GGG + chr8_4:21333979-21333998 Msa1319110:intron 40.0%
AGGGAATACATGAGATTGGA+GGG + chr8_4:21334173-21334192 Msa1319110:intron 40.0%
AGATTGGAGGGAGGAAATTT+GGG + chr8_4:21334185-21334204 Msa1319110:intron 40.0%
GAAAACAACCAAGAGATGGT+TGG - chr8_4:21334219-21334238 None:intergenic 40.0%
GTTGGAAAACAACCAAGAGA+TGG - chr8_4:21334223-21334242 None:intergenic 40.0%
!! TGGTTGTTTTCCAACCATCA+AGG + chr8_4:21334228-21334247 Msa1319110:intron 40.0%
ACACAACACCAAACTATCAG+TGG + chr8_4:21334312-21334331 Msa1319110:intron 40.0%
CTCAAGTTCCACTGATAGTT+TGG - chr8_4:21334323-21334342 None:intergenic 40.0%
CCAAATTTGGTAAGTTACGG+CGG + chr8_4:21334425-21334444 Msa1319110:intron 40.0%
GACACAGGAGGTAAAAGATT+TGG - chr8_4:21334980-21334999 None:intergenic 40.0%
! AATTTGATGGCTTAGGACAC+AGG - chr8_4:21334995-21335014 None:intergenic 40.0%
AGAGGATATTACAGTTGTGG+AGG + chr8_4:21335662-21335681 Msa1319110:CDS 40.0%
TCCTACTACCAGTTTCAGTA+GGG - chr8_4:21335757-21335776 None:intergenic 40.0%
ATCCTACTACCAGTTTCAGT+AGG - chr8_4:21335758-21335777 None:intergenic 40.0%
!!! AGTTTTGAGATTGTAAGGGC+CGG - chr8_4:21335819-21335838 None:intergenic 40.0%
CTGGCAAATTACCCACCATA+TGG + chr8_4:21330907-21330926 Msa1319110:CDS 45.0%
!!! TGCTTACATTTTGGGACGGA+GGG - chr8_4:21331109-21331128 None:intergenic 45.0%
!!! TTGCTTACATTTTGGGACGG+AGG - chr8_4:21331110-21331129 None:intergenic 45.0%
! GGAGTCAATTTTGCATCAGC+TGG + chr8_4:21331394-21331413 Msa1319110:CDS 45.0%
! AATTTTGCATCAGCTGGAGC+TGG + chr8_4:21331400-21331419 Msa1319110:CDS 45.0%
! ATTTTGCATCAGCTGGAGCT+GGG + chr8_4:21331401-21331420 Msa1319110:CDS 45.0%
GCCTTAATGGAAACCCATCA+AGG + chr8_4:21331424-21331443 Msa1319110:CDS 45.0%
AATGGAAACCCATCAAGGAC+TGG + chr8_4:21331429-21331448 Msa1319110:CDS 45.0%
! ATCCAAGTTTGGAATTCCGC+CGG + chr8_4:21331649-21331668 Msa1319110:intron 45.0%
! TTTGGAATTCCGCCGGAATT+TGG + chr8_4:21331656-21331675 Msa1319110:intron 45.0%
ATAGTGCACAGGTTGTTGAC+AGG + chr8_4:21331839-21331858 Msa1319110:intron 45.0%
TAGTGCACAGGTTGTTGACA+GGG + chr8_4:21331840-21331859 Msa1319110:intron 45.0%
! TAATGTAGACGCGGCGTTTT+CGG + chr8_4:21332083-21332102 Msa1319110:intron 45.0%
! CGTTTTCGGAACGATTTCAG+AGG + chr8_4:21332097-21332116 Msa1319110:intron 45.0%
CGATTTCAGAGGACAGGTAT+CGG + chr8_4:21332108-21332127 Msa1319110:intron 45.0%
GTGTGTATTCGTGATGAGTC+TGG + chr8_4:21332132-21332151 Msa1319110:intron 45.0%
CAAGTTTATCCCGTGGTTGT+CGG + chr8_4:21332189-21332208 Msa1319110:intron 45.0%
GTCTATATCATGCCCTCCAA+TGG + chr8_4:21332223-21332242 Msa1319110:intron 45.0%
CATGTCTTGCATCCATTGGA+GGG - chr8_4:21332238-21332257 None:intergenic 45.0%
ACGATCGATGTCACAGAGTT+TGG + chr8_4:21332321-21332340 Msa1319110:intron 45.0%
TATTAGGCGACAAGCGAATG+CGG + chr8_4:21332407-21332426 Msa1319110:intron 45.0%
GTGTCTTTAGATCTGTCACC+TGG - chr8_4:21332987-21333006 None:intergenic 45.0%
TGAAGAAACCACATCTCTGC+TGG + chr8_4:21333059-21333078 Msa1319110:CDS 45.0%
AATGTTAACTCCTGGGGCAA+TGG + chr8_4:21333463-21333482 Msa1319110:intron 45.0%
TATTCCTTAACCATTGCCCC+AGG - chr8_4:21333476-21333495 None:intergenic 45.0%
GGTCATGCTAACCATGGTTA+AGG - chr8_4:21333599-21333618 None:intergenic 45.0%
GTCATCTATTGTGGGACAGA+GGG - chr8_4:21333750-21333769 None:intergenic 45.0%
GTCAAGTAATATGGGACGGA+AGG + chr8_4:21333978-21333997 Msa1319110:intron 45.0%
CAAGTAATATGGGACGGAAG+GGG + chr8_4:21333980-21333999 Msa1319110:intron 45.0%
CAGGGAATACATGAGATTGG+AGG + chr8_4:21334172-21334191 Msa1319110:intron 45.0%
GAATACATGAGATTGGAGGG+AGG + chr8_4:21334176-21334195 Msa1319110:intron 45.0%
GAGATTGGAGGGAGGAAATT+TGG + chr8_4:21334184-21334203 Msa1319110:intron 45.0%
CCGCCGTAACTTACCAAATT+TGG - chr8_4:21334428-21334447 None:intergenic 45.0%
TTGGTAAGTTACGGCGGATA+TGG + chr8_4:21334431-21334450 Msa1319110:intron 45.0%
AGGTTTGAAAGAAGCAGGAG+TGG + chr8_4:21335616-21335635 Msa1319110:intron 45.0%
TCTACTCACCCTACTGAAAC+TGG + chr8_4:21335746-21335765 Msa1319110:CDS 45.0%
ACCCTACTGAAACTGGTAGT+AGG + chr8_4:21335753-21335772 Msa1319110:CDS 45.0%
!! AATTAAATTATAATAAAAAG+TGG - chr8_4:21334523-21334542 None:intergenic 5.0%
! TTTTGCATCAGCTGGAGCTG+GGG + chr8_4:21331402-21331421 Msa1319110:CDS 50.0%
TTCCGGCGGAATTCCAAACT+TGG - chr8_4:21331654-21331673 None:intergenic 50.0%
AACTTCAGGCCAAATTCCGG+CGG - chr8_4:21331668-21331687 None:intergenic 50.0%
CACTTGAGTCTCCCATTGCT+CGG - chr8_4:21332063-21332082 None:intergenic 50.0%
TCGGAACGATTTCAGAGGAC+AGG + chr8_4:21332102-21332121 Msa1319110:intron 50.0%
GCATGTCTTGCATCCATTGG+AGG - chr8_4:21332239-21332258 None:intergenic 50.0%
ACTCTGTGACATCGATCGTG+CGG - chr8_4:21332320-21332339 None:intergenic 50.0%
CCTCCTCCTTTACAAACTCC+CGG + chr8_4:21332376-21332395 Msa1319110:intron 50.0%
CTCCTCCTTTACAAACTCCC+GGG + chr8_4:21332377-21332396 Msa1319110:intron 50.0%
ACTCCCGGGTCGAGTTTATT+AGG + chr8_4:21332391-21332410 Msa1319110:intron 50.0%
TCGCCTAATAAACTCGACCC+GGG - chr8_4:21332397-21332416 None:intergenic 50.0%
GTCGCCTAATAAACTCGACC+CGG - chr8_4:21332398-21332417 None:intergenic 50.0%
GGATGTGGCTTCTCTTGCAA+GGG - chr8_4:21332442-21332461 None:intergenic 50.0%
AGGATGTGGCTTCTCTTGCA+AGG - chr8_4:21332443-21332462 None:intergenic 50.0%
!! CATGGGACTAGCTAAGGATG+TGG - chr8_4:21332457-21332476 None:intergenic 50.0%
AACTCCTGGGGCAATGGTTA+AGG + chr8_4:21333469-21333488 Msa1319110:intron 50.0%
GGTCATCTATTGTGGGACAG+AGG - chr8_4:21333751-21333770 None:intergenic 50.0%
!! TTGGTGTTGTGTACTTGGGC+AGG - chr8_4:21334304-21334323 None:intergenic 50.0%
! TTGATGGCTTAGGACACAGG+AGG - chr8_4:21334992-21335011 None:intergenic 50.0%
TGCTGAAACGCTGCTGAACG+CGG - chr8_4:21331904-21331923 None:intergenic 55.0%
GCAGTCTGCTATCTCTGTGC+AGG + chr8_4:21331939-21331958 Msa1319110:intron 55.0%
!! TTGCTCGGAGGTGTCCATCT+CGG - chr8_4:21332048-21332067 None:intergenic 55.0%
AGATGGACACCTCCGAGCAA+TGG + chr8_4:21332048-21332067 Msa1319110:intron 55.0%
GATGGACACCTCCGAGCAAT+GGG + chr8_4:21332049-21332068 Msa1319110:intron 55.0%
TTGAGTCTCCCATTGCTCGG+AGG - chr8_4:21332060-21332079 None:intergenic 55.0%
CTCTGTGACATCGATCGTGC+GGG - chr8_4:21332319-21332338 None:intergenic 55.0%
CCGGGAGTTTGTAAAGGAGG+AGG - chr8_4:21332379-21332398 None:intergenic 55.0%
GACCCGGGAGTTTGTAAAGG+AGG - chr8_4:21332382-21332401 None:intergenic 55.0%
CTCGACCCGGGAGTTTGTAA+AGG - chr8_4:21332385-21332404 None:intergenic 55.0%
! AGCTTTGGCCAGCAGAGATG+TGG - chr8_4:21333070-21333089 None:intergenic 55.0%
!! TGTGGTAGTGGCCCATACAG+AGG + chr8_4:21335644-21335663 Msa1319110:CDS 55.0%
AGCTGGAGCTGGGGCCTTAA+TGG + chr8_4:21331411-21331430 Msa1319110:CDS 60.0%
CAGCTGCTGTTCAGCCGAGA+TGG + chr8_4:21332031-21332050 Msa1319110:intron 60.0%
TTATCCCGTGGTTGTCGGCG+AGG + chr8_4:21332194-21332213 Msa1319110:intron 60.0%
TAACGCCTCGCCGACAACCA+CGG - chr8_4:21332202-21332221 None:intergenic 60.0%
ATCGATCGTGCGGGAGTGGA+AGG - chr8_4:21332310-21332329 None:intergenic 60.0%
TGACATCGATCGTGCGGGAG+TGG - chr8_4:21332314-21332333 None:intergenic 60.0%
TAGGCGACAAGCGAATGCGG+CGG + chr8_4:21332410-21332429 Msa1319110:intron 60.0%
GAAGCAGGAGTGGCATGCTG+TGG + chr8_4:21335626-21335645 Msa1319110:CDS 60.0%
GGAGTGGCATGCTGTGGTAG+TGG + chr8_4:21335632-21335651 Msa1319110:CDS 60.0%
CTCGGCTGAACAGCAGCTGC+TGG - chr8_4:21332030-21332049 None:intergenic 65.0%
AACGCCTCGCCGACAACCAC+GGG - chr8_4:21332201-21332220 None:intergenic 65.0%
! GTGGTTGTCGGCGAGGCGTT+AGG + chr8_4:21332201-21332220 Msa1319110:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 21330587 21335939 21330587 ID=Msa1319110;Name=Msa1319110
chr8_4 mRNA 21330587 21335939 21330587 ID=Msa1319110-mRNA-1;Parent=Msa1319110;Name=Msa1319110-mRNA-1;_AED=0.13;_eAED=0.13;_QI=97|0.75|0.8|1|0.75|0.6|5|86|269
chr8_4 exon 21330587 21330672 21330587 ID=Msa1319110-mRNA-1:exon:7746;Parent=Msa1319110-mRNA-1
chr8_4 exon 21330722 21330994 21330722 ID=Msa1319110-mRNA-1:exon:7747;Parent=Msa1319110-mRNA-1
chr8_4 exon 21331329 21331450 21331329 ID=Msa1319110-mRNA-1:exon:7748;Parent=Msa1319110-mRNA-1
chr8_4 exon 21332988 21333177 21332988 ID=Msa1319110-mRNA-1:exon:7749;Parent=Msa1319110-mRNA-1
chr8_4 exon 21335618 21335939 21335618 ID=Msa1319110-mRNA-1:exon:7750;Parent=Msa1319110-mRNA-1
chr8_4 five_prime_UTR 21330587 21330672 21330587 ID=Msa1319110-mRNA-1:five_prime_utr;Parent=Msa1319110-mRNA-1
chr8_4 five_prime_UTR 21330722 21330732 21330722 ID=Msa1319110-mRNA-1:five_prime_utr;Parent=Msa1319110-mRNA-1
chr8_4 CDS 21330733 21330994 21330733 ID=Msa1319110-mRNA-1:cds;Parent=Msa1319110-mRNA-1
chr8_4 CDS 21331329 21331450 21331329 ID=Msa1319110-mRNA-1:cds;Parent=Msa1319110-mRNA-1
chr8_4 CDS 21332988 21333177 21332988 ID=Msa1319110-mRNA-1:cds;Parent=Msa1319110-mRNA-1
chr8_4 CDS 21335618 21335853 21335618 ID=Msa1319110-mRNA-1:cds;Parent=Msa1319110-mRNA-1
chr8_4 three_prime_UTR 21335854 21335939 21335854 ID=Msa1319110-mRNA-1:three_prime_utr;Parent=Msa1319110-mRNA-1
Gene Sequence

>Msa1319110

ATGGCAAGCAAAAAATTTAATTTTTGTTTCGTAATTTTCTTCCTATGTTATGGAATGCTAATTCCAACACTTGGTAACATATGTTTGCCAAAAGAACATGTTGCGTTATTTGTATTTGGAGATTCATTATTTGATATCGGAAACAATAATTATATCAATACTACTGCTGATTATCTGGCAAATTACCCACCATATGGTGAAACCTTCTTCAAGTATCCATCTGGTAGATTTTCTGATGGACGTGTCATTCCAGATTTCATAGCTGAGTATGCTAAGTTACCATTAATTCAGCCATATTTATTTCCTGGTTCTCAACTATATATCAATGGAGTCAATTTTGCATCAGCTGGAGCTGGGGCCTTAATGGAAACCCATCAAGGACTGGTGACAGATCTAAAGACACAATTGACTTATTTCAAGAATGTCAAGAACGTATTGAGGCAGAAACTAGGAGATGAAGAAACCACATCTCTGCTGGCCAAAGCTGTTTACTTAATCAACATTGGAGGCAATGATTATTTTGTAGAAAATTCCAGCTTATACACTCATGAAAAATACGTATCCATGGTAGTTGGTTTGAAAGAAGCAGGAGTGGCATGCTGTGGTAGTGGCCCATACAGAGGATATTACAGTTGTGGAGGTAAAAGAGAAGTAAAAGATTATGACTTGTGTGAGAATCCTTCTGAATATTTGTTCTTTGACTCTACTCACCCTACTGAAACTGGTAGTAGGATTATTTCCCAATATATGTGGAGTGGAAATCAAAGTATCACCGGCCCTTACAATCTCAAAACTCTATTTGAAGAATAG
Protein sequence

>Msa1319110

MASKKFNFCFVIFFLCYGMLIPTLGNICLPKEHVALFVFGDSLFDIGNNNYINTTADYLANYPPYGETFFKYPSGRFSDGRVIPDFIAEYAKLPLIQPYLFPGSQLYINGVNFASAGAGALMETHQGLVTDLKTQLTYFKNVKNVLRQKLGDEETTSLLAKAVYLINIGGNDYFVENSSLYTHEKYVSMVVGLKEAGVACCGSGPYRGYYSCGGKREVKDYDLCENPSEYLFFDSTHPTETGSRIISQYMWSGNQSITGPYNLKTLFEE*