Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320050 | XP_013444993.1 | 70.000 | 70 | 21 | 0 | 1 | 70 | 228 | 297 | 3.02e-21 | 105 |
| Msa1320050 | XP_013444993.1 | 96.626 | 326 | 11 | 0 | 92 | 417 | 1 | 326 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320050 | sp|Q9LE33|HPR3_ARATH | 50.000 | 324 | 149 | 4 | 97 | 415 | 7 | 322 | 3.59e-103 | 311 |
| Msa1320050 | sp|Q9LE33|HPR3_ARATH | 63.333 | 90 | 28 | 1 | 1 | 85 | 226 | 315 | 1.25e-26 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320050 | A0A072TQA0 | 70.000 | 70 | 21 | 0 | 1 | 70 | 228 | 297 | 1.44e-21 | 105 |
| Msa1320050 | A0A072TQA0 | 96.626 | 326 | 11 | 0 | 92 | 417 | 1 | 326 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1239440 | Msa1320050 | 0.898173 | 6.876844e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320050 | MtrunA17_Chr8g0351111 | 96.626 | 326 | 11 | 0 | 92 | 417 | 1 | 326 | 0.0 | 647 |
| Msa1320050 | MtrunA17_Chr8g0351111 | 70.000 | 70 | 21 | 0 | 1 | 70 | 228 | 297 | 2.78e-25 | 105 |
| Msa1320050 | MtrunA17_Chr8g0351121 | 54.496 | 367 | 148 | 5 | 57 | 413 | 1 | 358 | 2.69e-135 | 392 |
| Msa1320050 | MtrunA17_Chr8g0351121 | 79.348 | 92 | 14 | 1 | 1 | 87 | 264 | 355 | 1.52e-38 | 142 |
| Msa1320050 | MtrunA17_Chr8g0351141 | 59.119 | 318 | 129 | 1 | 96 | 413 | 9 | 325 | 3.12e-135 | 390 |
| Msa1320050 | MtrunA17_Chr8g0351141 | 73.913 | 92 | 19 | 1 | 1 | 87 | 231 | 322 | 2.07e-35 | 133 |
| Msa1320050 | MtrunA17_Chr7g0246361 | 52.234 | 291 | 123 | 6 | 127 | 415 | 15 | 291 | 8.09e-98 | 294 |
| Msa1320050 | MtrunA17_Chr7g0246361 | 64.935 | 77 | 26 | 1 | 1 | 77 | 196 | 271 | 1.16e-24 | 102 |
| Msa1320050 | MtrunA17_Chr4g0004711 | 43.689 | 309 | 156 | 5 | 111 | 413 | 16 | 312 | 8.53e-88 | 269 |
| Msa1320050 | MtrunA17_Chr4g0004711 | 55.882 | 68 | 30 | 0 | 3 | 70 | 220 | 287 | 1.31e-17 | 83.2 |
| Msa1320050 | MtrunA17_Chr4g0004681 | 44.840 | 281 | 147 | 2 | 133 | 413 | 37 | 309 | 1.18e-87 | 268 |
| Msa1320050 | MtrunA17_Chr4g0004681 | 55.882 | 68 | 30 | 0 | 3 | 70 | 217 | 284 | 1.88e-17 | 82.8 |
| Msa1320050 | MtrunA17_Chr4g0004721 | 45.936 | 283 | 144 | 3 | 133 | 413 | 38 | 313 | 4.60e-87 | 267 |
| Msa1320050 | MtrunA17_Chr4g0004721 | 55.882 | 68 | 30 | 0 | 3 | 70 | 221 | 288 | 3.79e-18 | 84.7 |
| Msa1320050 | MtrunA17_Chr2g0331641 | 44.660 | 309 | 158 | 5 | 109 | 413 | 14 | 313 | 2.00e-77 | 243 |
| Msa1320050 | MtrunA17_Chr2g0331641 | 50.649 | 77 | 38 | 0 | 3 | 79 | 221 | 297 | 2.42e-17 | 82.4 |
| Msa1320050 | MtrunA17_Chr4g0004741 | 44.170 | 283 | 149 | 3 | 133 | 413 | 37 | 312 | 6.85e-72 | 228 |
| Msa1320050 | MtrunA17_Chr4g0004741 | 54.412 | 68 | 31 | 0 | 3 | 70 | 220 | 287 | 1.26e-17 | 83.2 |
| Msa1320050 | MtrunA17_Chr3g0077771 | 24.862 | 362 | 230 | 9 | 81 | 417 | 38 | 382 | 2.00e-26 | 109 |
| Msa1320050 | MtrunA17_Chr4g0000511 | 29.457 | 258 | 167 | 5 | 167 | 412 | 152 | 406 | 5.16e-24 | 104 |
| Msa1320050 | MtrunA17_Chr1g0208141 | 29.730 | 259 | 163 | 7 | 167 | 411 | 119 | 372 | 1.00e-22 | 100 |
| Msa1320050 | MtrunA17_Chr1g0210971 | 27.734 | 256 | 157 | 6 | 174 | 403 | 94 | 347 | 7.72e-22 | 96.7 |
| Msa1320050 | MtrunA17_Chr6g0450811 | 26.923 | 260 | 173 | 5 | 156 | 404 | 111 | 364 | 2.44e-21 | 95.1 |
| Msa1320050 | MtrunA17_Chr7g0248631 | 26.549 | 226 | 157 | 4 | 189 | 406 | 97 | 321 | 2.25e-16 | 81.3 |
| Msa1320050 | MtrunA17_Chr6g0450821 | 25.197 | 254 | 166 | 4 | 156 | 404 | 81 | 315 | 2.44e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320050 | AT2G45630.2 | 49.704 | 338 | 159 | 5 | 81 | 413 | 6 | 337 | 1.70e-109 | 326 |
| Msa1320050 | AT2G45630.2 | 59.091 | 88 | 31 | 1 | 3 | 85 | 245 | 332 | 8.42e-26 | 107 |
| Msa1320050 | AT1G12550.1 | 50.000 | 324 | 149 | 4 | 97 | 415 | 7 | 322 | 3.65e-104 | 311 |
| Msa1320050 | AT1G12550.1 | 63.333 | 90 | 28 | 1 | 1 | 85 | 226 | 315 | 1.27e-27 | 112 |
| Msa1320050 | AT1G79870.1 | 43.533 | 317 | 167 | 5 | 99 | 413 | 6 | 312 | 1.71e-81 | 253 |
| Msa1320050 | AT1G79870.1 | 54.286 | 70 | 32 | 0 | 1 | 70 | 218 | 287 | 8.95e-18 | 84.0 |
| Msa1320050 | AT1G79870.2 | 40.063 | 317 | 159 | 5 | 99 | 413 | 6 | 293 | 3.23e-71 | 226 |
| Msa1320050 | AT1G79870.2 | 54.286 | 70 | 32 | 0 | 1 | 70 | 199 | 268 | 6.74e-18 | 84.0 |
| Msa1320050 | AT2G45630.1 | 41.916 | 167 | 87 | 4 | 81 | 243 | 6 | 166 | 1.92e-32 | 121 |
| Msa1320050 | AT1G72190.1 | 24.390 | 369 | 220 | 10 | 51 | 397 | 23 | 354 | 5.69e-27 | 111 |
| Msa1320050 | AT1G17745.1 | 29.537 | 281 | 178 | 9 | 147 | 412 | 125 | 400 | 1.85e-25 | 109 |
| Msa1320050 | AT4G34200.1 | 30.620 | 258 | 162 | 6 | 167 | 411 | 125 | 378 | 1.09e-24 | 107 |
| Msa1320050 | AT5G28310.1 | 34.197 | 193 | 75 | 3 | 222 | 413 | 91 | 232 | 4.73e-24 | 100 |
| Msa1320050 | AT1G17745.2 | 27.063 | 303 | 184 | 8 | 147 | 412 | 125 | 427 | 6.94e-24 | 104 |
| Msa1320050 | AT3G19480.1 | 31.395 | 258 | 158 | 8 | 167 | 410 | 110 | 362 | 4.45e-23 | 102 |
| Msa1320050 | AT5G14780.2 | 26.337 | 243 | 164 | 4 | 172 | 404 | 111 | 348 | 1.29e-21 | 95.9 |
| Msa1320050 | AT5G14780.3 | 26.337 | 243 | 164 | 4 | 172 | 404 | 99 | 336 | 1.42e-21 | 95.9 |
| Msa1320050 | AT5G14780.1 | 26.337 | 243 | 164 | 4 | 172 | 404 | 125 | 362 | 3.21e-21 | 95.1 |
| Msa1320050 | AT1G68010.3 | 27.519 | 258 | 166 | 3 | 174 | 410 | 94 | 351 | 7.38e-20 | 90.9 |
| Msa1320050 | AT1G68010.1 | 28.627 | 255 | 156 | 6 | 174 | 403 | 94 | 347 | 8.48e-20 | 90.9 |
| Msa1320050 | AT1G68010.2 | 28.516 | 256 | 156 | 7 | 174 | 403 | 94 | 348 | 3.03e-18 | 86.3 |
| Msa1320050 | AT1G01510.1 | 25.751 | 233 | 154 | 4 | 189 | 406 | 105 | 333 | 1.99e-13 | 72.8 |
Find 104 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGATAGGCCTGAGGGTTT+GGG | 0.244134 | 8_4:-24228625 | None:intergenic |
| GGCCTGAGGGTTTGGGGTTT+AGG | 0.249977 | 8_4:-24228618 | None:intergenic |
| CTCGGAGGATGTGGCTGATA+TGG | 0.258496 | 8_4:+24228852 | Msa1320050:CDS |
| CTTCCAAAAGTACTTGTTCT+TGG | 0.268392 | 8_4:+24228541 | Msa1320050:CDS |
| CAGTGATAGGCCTGAGGGTT+TGG | 0.272695 | 8_4:-24228626 | None:intergenic |
| AAGAACTCTTTAGGAACATT+AGG | 0.281582 | 8_4:-24226528 | None:intergenic |
| GATCCTTGGGATTTCCCTCT+TGG | 0.293816 | 8_4:+24228952 | Msa1320050:CDS |
| TATAAACAACGATGTCCTTT+TGG | 0.311089 | 8_4:+24229661 | Msa1320050:CDS |
| CGCGACGACGGCATTCATTC+AGG | 0.317773 | 8_4:-24228798 | None:intergenic |
| TCCAATGAAAAGAACTCTTT+AGG | 0.329921 | 8_4:-24226537 | None:intergenic |
| ATGCCGTCGTCGCGGAATTC+AGG | 0.333564 | 8_4:+24228807 | Msa1320050:CDS |
| CGAGTTGGAATTGTTGGATT+AGG | 0.338569 | 8_4:+24229461 | Msa1320050:CDS |
| GGCGGGAACGTTCTGATCCT+TGG | 0.343806 | 8_4:+24228938 | Msa1320050:CDS |
| ATATGCAGCGCTACAGAATA+TGG | 0.355416 | 8_4:-24228695 | None:intergenic |
| GGCAAGCGAGTTGGAATTGT+TGG | 0.356871 | 8_4:+24229455 | Msa1320050:CDS |
| ACAATTGATCAAGTGTTTGA+TGG | 0.359013 | 8_4:+24229742 | Msa1320050:CDS |
| GGAATTCAGGTTGCCGGTGC+TGG | 0.372744 | 8_4:+24228820 | Msa1320050:CDS |
| GGACCAAGAACAAGTACTTT+TGG | 0.377384 | 8_4:-24228544 | None:intergenic |
| AGAAATTGCTGGTGCTGGTT+TGG | 0.382247 | 8_4:+24229769 | Msa1320050:CDS |
| TGTAACTTCTGAGTCTTTGA+TGG | 0.385938 | 8_4:+24226590 | Msa1320050:CDS |
| ACTGATTCTCTCATGGGATT+AGG | 0.389865 | 8_4:+24229975 | Msa1320050:exon |
| GAAGGGTTTATTGTAAATGT+TGG | 0.390642 | 8_4:+24229695 | Msa1320050:CDS |
| ATTGTTGGATTAGGAAGTAT+TGG | 0.399827 | 8_4:+24229470 | Msa1320050:CDS |
| TGAGATTGGAGGTGCTGGTT+TGG | 0.404758 | 8_4:+24226488 | Msa1320050:CDS |
| TTGTTGATGGATTGTGGTTG+TGG | 0.413973 | 8_4:-24228666 | None:intergenic |
| GGATTTCCCTCTTGGATACA+AGG | 0.415287 | 8_4:+24228960 | Msa1320050:CDS |
| GCGGGAACGTTCTGATCCTT+GGG | 0.419342 | 8_4:+24228939 | Msa1320050:CDS |
| GGATGAATTGTTGCAGTGAT+AGG | 0.422185 | 8_4:-24228639 | None:intergenic |
| TGTTTATAATGTGTCGTGTT+TGG | 0.423029 | 8_4:-24229646 | None:intergenic |
| TGTTTGATTGATGATGAGAT+TGG | 0.423622 | 8_4:+24226474 | Msa1320050:CDS |
| AATATGGCGGGAATTGTTGA+TGG | 0.425691 | 8_4:-24228679 | None:intergenic |
| ATGGATTGTGGTTGTGGGAA+AGG | 0.445567 | 8_4:-24228660 | None:intergenic |
| TCAATAACATTGGAATAGAA+AGG | 0.449303 | 8_4:-24229575 | None:intergenic |
| AACTTCACTGGACTAATTAG+TGG | 0.456808 | 8_4:-24229944 | None:intergenic |
| CGGGAATTGTTGATGGATTG+TGG | 0.457939 | 8_4:-24228672 | None:intergenic |
| GTTGATAACTGATTCTCTCA+TGG | 0.458385 | 8_4:+24229968 | Msa1320050:exon |
| ACTAATTAGTCCAGTGAAGT+TGG | 0.461367 | 8_4:+24229946 | Msa1320050:CDS |
| GGATTTGTGGTCTTTGAGAA+AGG | 0.465144 | 8_4:-24228495 | None:intergenic |
| TTTATTGTAAATGTTGGAAG+AGG | 0.472073 | 8_4:+24229701 | Msa1320050:CDS |
| GATGATGAGATTGGAGGTGC+TGG | 0.475466 | 8_4:+24226483 | Msa1320050:CDS |
| CGTCGCGGAATTCAGGTTGC+CGG | 0.475850 | 8_4:+24228814 | Msa1320050:CDS |
| TGTTGATGGATTGTGGTTGT+GGG | 0.478601 | 8_4:-24228665 | None:intergenic |
| CAAGGCTGAGCGAGGGAAGA+AGG | 0.482908 | 8_4:-24228741 | None:intergenic |
| TTGATAACTGATTCTCTCAT+GGG | 0.484176 | 8_4:+24229969 | Msa1320050:exon |
| CAGTTATCAACCAACTTCAC+TGG | 0.488690 | 8_4:-24229956 | None:intergenic |
| GTAACTTCTGAGTCTTTGAT+GGG | 0.496900 | 8_4:+24226591 | Msa1320050:CDS |
| GGTGGAATCATAGTGAATGT+TGG | 0.498393 | 8_4:+24226414 | Msa1320050:CDS |
| ATTGTAAATGTTGGAAGAGG+TGG | 0.499918 | 8_4:+24229704 | Msa1320050:CDS |
| ATCGATATGTGAGGAGGTGG+CGG | 0.500364 | 8_4:+24228920 | Msa1320050:CDS |
| GTTGAGAACGTCGGTAGTGA+TGG | 0.509803 | 8_4:-24228719 | None:intergenic |
| GTGATAGGCCTGAGGGTTTG+GGG | 0.518270 | 8_4:-24228624 | None:intergenic |
| TTCCTAAACCCCAAACCCTC+AGG | 0.518357 | 8_4:+24228616 | Msa1320050:CDS |
| GCTCTTTGCAATGGATAATG+TGG | 0.520923 | 8_4:+24229826 | Msa1320050:CDS |
| CTTGTTGTCACCTCCAGTGT+TGG | 0.525756 | 8_4:+24228760 | Msa1320050:CDS |
| CATGAGGAAGGTGACGGTGG+CGG | 0.532819 | 8_4:+24228897 | Msa1320050:CDS |
| AAGGTTGAGAAGCATGTTGG+TGG | 0.532888 | 8_4:-24228565 | None:intergenic |
| GTGATGTTGGCACTAGGAAA+AGG | 0.533205 | 8_4:+24226393 | None:intergenic |
| TAGTTATCAGGCAAGCGAGT+TGG | 0.543767 | 8_4:+24229446 | Msa1320050:intron |
| CAATAACATTGGAATAGAAA+GGG | 0.548282 | 8_4:-24229574 | None:intergenic |
| TTGATCAAGTGTTTGATGGA+AGG | 0.551467 | 8_4:+24229746 | Msa1320050:CDS |
| CGGATCGATATGTGAGGAGG+TGG | 0.555208 | 8_4:+24228917 | Msa1320050:CDS |
| GTGAGAGTAGAGTGATTCGA+AGG | 0.555679 | 8_4:-24228584 | None:intergenic |
| GAAGGAGAAATTGCTGGTGC+TGG | 0.558068 | 8_4:+24229764 | Msa1320050:CDS |
| AGTTTGTGTGAACTTGTGGC+AGG | 0.560200 | 8_4:+24229893 | Msa1320050:CDS |
| ATCATAGTGAATGTTGGAAG+AGG | 0.561649 | 8_4:+24226420 | Msa1320050:CDS |
| ACAGTAAAAGCTGCAGAATG+TGG | 0.564794 | 8_4:-24229857 | None:intergenic |
| ATTCAGGTTGCCGGTGCTGG+AGG | 0.565610 | 8_4:+24228823 | Msa1320050:CDS |
| TCGATATGTGAGGAGGTGGC+GGG | 0.566864 | 8_4:+24228921 | Msa1320050:CDS |
| AACTTCTAGCGACGCACTTG+TGG | 0.568567 | 8_4:+24229604 | Msa1320050:CDS |
| TTGATTGATGATGAGATTGG+AGG | 0.572091 | 8_4:+24226477 | Msa1320050:CDS |
| TGATGAAAAGCTCTTTGCAA+TGG | 0.579661 | 8_4:+24229817 | Msa1320050:CDS |
| CAACAGCTGCATGTGGTGAA+AGG | 0.581694 | 8_4:-24226569 | None:intergenic |
| TTGATGGAAGGAGAAATTGC+TGG | 0.584407 | 8_4:+24229758 | Msa1320050:CDS |
| AAAGAAGTGATGTTGGCACT+AGG | 0.585797 | 8_4:+24226387 | None:intergenic |
| AGTTGCAAGATCAATAACAT+TGG | 0.588695 | 8_4:-24229585 | None:intergenic |
| AATGTGATCAGTTCCAACAC+TGG | 0.588992 | 8_4:-24228773 | None:intergenic |
| CAACCTGAATTCCGCGACGA+CGG | 0.589863 | 8_4:-24228810 | None:intergenic |
| CGAGAAAACTCCTCCAGCAC+CGG | 0.593259 | 8_4:-24228833 | None:intergenic |
| TGGATTAGGAAGTATTGGCA+TGG | 0.593545 | 8_4:+24229475 | Msa1320050:CDS |
| GCAGCGCTACAGAATATGGC+GGG | 0.604474 | 8_4:-24228691 | None:intergenic |
| TGTTGCAGTGATAGGCCTGA+GGG | 0.610418 | 8_4:-24228631 | None:intergenic |
| GGTGACAACAAGGCTGAGCG+AGG | 0.616021 | 8_4:-24228749 | None:intergenic |
| AATGAGTTTGTGTGAACTTG+TGG | 0.617149 | 8_4:+24229889 | Msa1320050:CDS |
| CGTTGCTGATTGCTGTCATG+AGG | 0.622722 | 8_4:+24228881 | Msa1320050:CDS |
| TGTGAACCTTGTATCCAAGA+GGG | 0.623359 | 8_4:-24228966 | None:intergenic |
| CAACACTGGAGGTGACAACA+AGG | 0.627680 | 8_4:-24228759 | None:intergenic |
| ATGTTGGCACTAGGAAAAGG+TGG | 0.629017 | 8_4:+24226396 | Msa1320050:CDS |
| ATGTGAACCTTGTATCCAAG+AGG | 0.641365 | 8_4:-24228967 | None:intergenic |
| CTGAATGAATGCCGTCGTCG+CGG | 0.646790 | 8_4:+24228799 | Msa1320050:CDS |
| TCGAAGGTTGAGAAGCATGT+TGG | 0.650000 | 8_4:-24228568 | None:intergenic |
| TATCCAAGAGGGAAATCCCA+AGG | 0.655740 | 8_4:-24228955 | None:intergenic |
| GAAGTTACAACAGCTGCATG+TGG | 0.657680 | 8_4:-24226576 | None:intergenic |
| GCTGATTGCTGTCATGAGGA+AGG | 0.663926 | 8_4:+24228885 | Msa1320050:CDS |
| GTGACAACAAGGCTGAGCGA+GGG | 0.665503 | 8_4:-24228748 | None:intergenic |
| TGCTGTCATGAGGAAGGTGA+CGG | 0.670329 | 8_4:+24228891 | Msa1320050:CDS |
| TGCAGCGCTACAGAATATGG+CGG | 0.674749 | 8_4:-24228692 | None:intergenic |
| TTGTTGCAGTGATAGGCCTG+AGG | 0.677465 | 8_4:-24228632 | None:intergenic |
| GTTTGTGTGAACTTGTGGCA+GGG | 0.679026 | 8_4:+24229894 | Msa1320050:CDS |
| GTGATCAGTTCCAACACTGG+AGG | 0.687001 | 8_4:-24228770 | None:intergenic |
| GGAGGATGTGGCTGATATGG+CGG | 0.694931 | 8_4:+24228855 | Msa1320050:CDS |
| GGGAAGAAGGTTGAGAACGT+CGG | 0.695377 | 8_4:-24228728 | None:intergenic |
| TGGCGGATCGATATGTGAGG+AGG | 0.696654 | 8_4:+24228914 | Msa1320050:CDS |
| TGTCATGAGGAAGGTGACGG+TGG | 0.712837 | 8_4:+24228894 | Msa1320050:CDS |
| CGGTGGCGGATCGATATGTG+AGG | 0.719773 | 8_4:+24228911 | Msa1320050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGAAATATTTTTTTGA+AGG | + | chr8_4:24227692-24227711 | Msa1320050:intron | 10.0% |
| !! | TCAAAAAATATTATTTATAG+AGG | - | chr8_4:24228260-24228279 | None:intergenic | 10.0% |
| !! | AACTATATAACTTGATTAAT+CGG | - | chr8_4:24226669-24226688 | None:intergenic | 15.0% |
| !! | CAAATTTGATTCAAAATATA+TGG | - | chr8_4:24227678-24227697 | None:intergenic | 15.0% |
| !!! | ATAATATTTTTTGAGTCATT+AGG | + | chr8_4:24228266-24228285 | Msa1320050:intron | 15.0% |
| !! | AAATTAAAAGGATTCAACAA+AGG | - | chr8_4:24226806-24226825 | None:intergenic | 20.0% |
| !! | GAGGAACAAAAAAAATTAAA+AGG | - | chr8_4:24226818-24226837 | None:intergenic | 20.0% |
| !! | TAAGAACAAACATGTTTAAA+AGG | - | chr8_4:24226849-24226868 | None:intergenic | 20.0% |
| !! | TTTAAACATGTTTGTTCTTA+TGG | + | chr8_4:24226849-24226868 | Msa1320050:intron | 20.0% |
| !! | TTATTCTCTAATAACATGTT+TGG | + | chr8_4:24227840-24227859 | Msa1320050:intron | 20.0% |
| !!! | TTGAGAAAGGAATATTTTTA+AGG | - | chr8_4:24228485-24228504 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTAAGGATTTG+TGG | - | chr8_4:24228511-24228530 | None:intergenic | 20.0% |
| !! | ACAAATCCTTAAAAATTCAA+TGG | + | chr8_4:24228510-24228529 | Msa1320050:CDS | 20.0% |
| !!! | AATTTTTTCCGATGTTAATT+TGG | - | chr8_4:24229070-24229089 | None:intergenic | 20.0% |
| !! | AAATTTCAATTTCTCATGAA+TGG | - | chr8_4:24229218-24229237 | None:intergenic | 20.0% |
| !! | ATGAGAAATTGAAATTTCTT+TGG | + | chr8_4:24229221-24229240 | Msa1320050:intron | 20.0% |
| ! | TAGTTGATTGAATGTGTATT+TGG | + | chr8_4:24226684-24226703 | Msa1320050:intron | 25.0% |
| !! | TTTGTTCTTATGGTGTTTTT+AGG | + | chr8_4:24226859-24226878 | Msa1320050:intron | 25.0% |
| ! | AGTGATCAATAAGTTCATTA+AGG | + | chr8_4:24226984-24227003 | Msa1320050:intron | 25.0% |
| ! | CTATAGAAGGGATAATATTT+GGG | - | chr8_4:24227311-24227330 | None:intergenic | 25.0% |
| ! | TGATTCAAAATATATGGCAA+AGG | - | chr8_4:24227672-24227691 | None:intergenic | 25.0% |
| !!! | GAAATATTTTTTTGAAGGTG+TGG | + | chr8_4:24227697-24227716 | Msa1320050:intron | 25.0% |
| !! | ATTATTCGCTAAGTTTTACA+TGG | - | chr8_4:24227729-24227748 | None:intergenic | 25.0% |
| !! | CATCAAAACACTTTTGATAA+TGG | - | chr8_4:24228064-24228083 | None:intergenic | 25.0% |
| ! | AACTAAGTTAACATTCATTG+CGG | - | chr8_4:24228153-24228172 | None:intergenic | 25.0% |
| ! | TTTCTGATTATCTATCAAAG+AGG | - | chr8_4:24228234-24228253 | None:intergenic | 25.0% |
| ! | GAGACACAATAATAATTAAG+AGG | + | chr8_4:24228369-24228388 | Msa1320050:intron | 25.0% |
| !!! | GGAATATTTTTAAGGATTTG+TGG | - | chr8_4:24228477-24228496 | None:intergenic | 25.0% |
| ! | TAACCTATCCAAATTAACAT+CGG | + | chr8_4:24229059-24229078 | Msa1320050:intron | 25.0% |
| !! | AATCATATTGAAAGTGCATA+TGG | + | chr8_4:24229360-24229379 | Msa1320050:intron | 25.0% |
| !!! | TTTTCACTGTTTTAGTTATC+AGG | + | chr8_4:24229434-24229453 | Msa1320050:intron | 25.0% |
| ! | CAATAACATTGGAATAGAAA+GGG | - | chr8_4:24229577-24229596 | None:intergenic | 25.0% |
| ! | TCAATAACATTGGAATAGAA+AGG | - | chr8_4:24229578-24229597 | None:intergenic | 25.0% |
| ! | TTTATTGTAAATGTTGGAAG+AGG | + | chr8_4:24229701-24229720 | Msa1320050:CDS | 25.0% |
| !! | TGTTTGATTGATGATGAGAT+TGG | + | chr8_4:24226474-24226493 | Msa1320050:CDS | 30.0% |
| ! | AAGAACTCTTTAGGAACATT+AGG | - | chr8_4:24226531-24226550 | None:intergenic | 30.0% |
| ! | TCCTAAAGAGTTCTTTTCAT+TGG | + | chr8_4:24226536-24226555 | Msa1320050:CDS | 30.0% |
| TCCAATGAAAAGAACTCTTT+AGG | - | chr8_4:24226540-24226559 | None:intergenic | 30.0% | |
| ! | TCAAATTTTGTTCCACAAGT+TGG | - | chr8_4:24226623-24226642 | None:intergenic | 30.0% |
| TGTTTAAAAGGATTCAACAG+AGG | - | chr8_4:24226837-24226856 | None:intergenic | 30.0% | |
| CCTATAGAAGGGATAATATT+TGG | - | chr8_4:24227312-24227331 | None:intergenic | 30.0% | |
| CCAAATATTATCCCTTCTAT+AGG | + | chr8_4:24227309-24227328 | Msa1320050:intron | 30.0% | |
| TCTCAGTAAAGATTCAAACT+CGG | + | chr8_4:24227751-24227770 | Msa1320050:intron | 30.0% | |
| ATCAAATGTATGAGTTCAAG+TGG | - | chr8_4:24227802-24227821 | None:intergenic | 30.0% | |
| CTTGGTAAACTTGAAAATCA+TGG | - | chr8_4:24227935-24227954 | None:intergenic | 30.0% | |
| TTAGATGAATTAAACTCCGA+GGG | - | chr8_4:24228313-24228332 | None:intergenic | 30.0% | |
| TTTAGATGAATTAAACTCCG+AGG | - | chr8_4:24228314-24228333 | None:intergenic | 30.0% | |
| AATGAAACTAGTACTGTTTG+AGG | - | chr8_4:24228441-24228460 | None:intergenic | 30.0% | |
| ! | CTTTGGCCATTGAATTTTTA+AGG | - | chr8_4:24228519-24228538 | None:intergenic | 30.0% |
| ! | TTTCCGATGTTAATTTGGAT+AGG | - | chr8_4:24229065-24229084 | None:intergenic | 30.0% |
| ACATGAAGTATATGTTGAAG+TGG | - | chr8_4:24229279-24229298 | None:intergenic | 30.0% | |
| ! | ATTGTTGGATTAGGAAGTAT+TGG | + | chr8_4:24229470-24229489 | Msa1320050:CDS | 30.0% |
| AGTTGCAAGATCAATAACAT+TGG | - | chr8_4:24229588-24229607 | None:intergenic | 30.0% | |
| TGTTTATAATGTGTCGTGTT+TGG | - | chr8_4:24229649-24229668 | None:intergenic | 30.0% | |
| ! | TATAAACAACGATGTCCTTT+TGG | + | chr8_4:24229661-24229680 | Msa1320050:CDS | 30.0% |
| ! | TTTTGGCATTAGGAAAAGAA+GGG | + | chr8_4:24229678-24229697 | Msa1320050:CDS | 30.0% |
| GAAGGGTTTATTGTAAATGT+TGG | + | chr8_4:24229695-24229714 | Msa1320050:CDS | 30.0% | |
| ACAATTGATCAAGTGTTTGA+TGG | + | chr8_4:24229742-24229761 | Msa1320050:CDS | 30.0% | |
| ! | TTGATAACTGATTCTCTCAT+GGG | + | chr8_4:24229969-24229988 | Msa1320050:exon | 30.0% |
| ATCATAGTGAATGTTGGAAG+AGG | + | chr8_4:24226420-24226439 | Msa1320050:CDS | 35.0% | |
| !! | TTGATTGATGATGAGATTGG+AGG | + | chr8_4:24226477-24226496 | Msa1320050:CDS | 35.0% |
| TGTAACTTCTGAGTCTTTGA+TGG | + | chr8_4:24226590-24226609 | Msa1320050:CDS | 35.0% | |
| GTAACTTCTGAGTCTTTGAT+GGG | + | chr8_4:24226591-24226610 | Msa1320050:CDS | 35.0% | |
| !! | TCATAGTCTACTTGATAACG+CGG | - | chr8_4:24226758-24226777 | None:intergenic | 35.0% |
| ! | TGCTACTAGTTTGTAGTGAT+CGG | + | chr8_4:24226905-24226924 | Msa1320050:intron | 35.0% |
| CTTCTATAGGGGTAGTAATT+GGG | + | chr8_4:24227150-24227169 | Msa1320050:intron | 35.0% | |
| TTTGTACACTTGTGACATTG+TGG | + | chr8_4:24227263-24227282 | Msa1320050:intron | 35.0% | |
| GGATAATATTTGGGTGACAT+TGG | - | chr8_4:24227302-24227321 | None:intergenic | 35.0% | |
| AACGATCTTGACCTATAGAA+GGG | - | chr8_4:24227323-24227342 | None:intergenic | 35.0% | |
| !! | TAGGTCAAGATCGTTGTTTT+TGG | + | chr8_4:24227328-24227347 | Msa1320050:intron | 35.0% |
| ATCAATCACATCGATAACGT+TGG | - | chr8_4:24227477-24227496 | None:intergenic | 35.0% | |
| !! | GTTGATGAATTTTCAGCTCT+GGG | + | chr8_4:24227563-24227582 | Msa1320050:intron | 35.0% |
| ! | TTGATGAATTTTCAGCTCTG+GGG | + | chr8_4:24227564-24227583 | Msa1320050:intron | 35.0% |
| ! | AAACTCGGATTTTCTCCAAT+TGG | + | chr8_4:24227766-24227785 | Msa1320050:intron | 35.0% |
| ! | AGTGGTTTGTAAACTCCAAT+TGG | - | chr8_4:24227784-24227803 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCCAAATTGATG+TGG | + | chr8_4:24227856-24227875 | Msa1320050:intron | 35.0% |
| CGTTCATTTCCACATCAATT+TGG | - | chr8_4:24227868-24227887 | None:intergenic | 35.0% | |
| GCGCAATTGAAAAACTCTAT+AGG | + | chr8_4:24227887-24227906 | Msa1320050:intron | 35.0% | |
| TTAGGCTTATCCTCATCTAA+CGG | + | chr8_4:24228284-24228303 | Msa1320050:intron | 35.0% | |
| ACACTCAAAATTGTGGTTAC+TGG | - | chr8_4:24228418-24228437 | None:intergenic | 35.0% | |
| TTTGAGGACACTCAAAATTG+TGG | - | chr8_4:24228425-24228444 | None:intergenic | 35.0% | |
| !! | AAGTACTTTTGGAAGGTCTT+TGG | - | chr8_4:24228536-24228555 | None:intergenic | 35.0% |
| ! | CAAGAACAAGTACTTTTGGA+AGG | - | chr8_4:24228543-24228562 | None:intergenic | 35.0% |
| !! | CTTCCAAAAGTACTTGTTCT+TGG | + | chr8_4:24228541-24228560 | Msa1320050:CDS | 35.0% |
| !!! | GAAGTGGTTTTTTTTTCTGC+TGG | - | chr8_4:24229263-24229282 | None:intergenic | 35.0% |
| ! | TGGTTCATCTCACATTTTGT+TGG | - | chr8_4:24229315-24229334 | None:intergenic | 35.0% |
| ! | GAAGCGACAATTCTATGTTT+TGG | - | chr8_4:24229335-24229354 | None:intergenic | 35.0% |
| ! | ATGTCTTTTGATGCTTAGAG+TGG | - | chr8_4:24229544-24229563 | None:intergenic | 35.0% |
| ! | CTTCTTTTCCTAATGCCAAA+AGG | - | chr8_4:24229679-24229698 | None:intergenic | 35.0% |
| ! | CTTTTGGCATTAGGAAAAGA+AGG | + | chr8_4:24229677-24229696 | Msa1320050:CDS | 35.0% |
| ATTGTAAATGTTGGAAGAGG+TGG | + | chr8_4:24229704-24229723 | Msa1320050:CDS | 35.0% | |
| TTGATCAAGTGTTTGATGGA+AGG | + | chr8_4:24229746-24229765 | Msa1320050:CDS | 35.0% | |
| ! | AAGAGCTTTTCATCAACATG+AGG | - | chr8_4:24229812-24229831 | None:intergenic | 35.0% |
| TGATGAAAAGCTCTTTGCAA+TGG | + | chr8_4:24229817-24229836 | Msa1320050:CDS | 35.0% | |
| AATGAGTTTGTGTGAACTTG+TGG | + | chr8_4:24229889-24229908 | Msa1320050:CDS | 35.0% | |
| AACTTCACTGGACTAATTAG+TGG | - | chr8_4:24229947-24229966 | None:intergenic | 35.0% | |
| ACTAATTAGTCCAGTGAAGT+TGG | + | chr8_4:24229946-24229965 | Msa1320050:CDS | 35.0% | |
| !! | GTTGATAACTGATTCTCTCA+TGG | + | chr8_4:24229968-24229987 | Msa1320050:exon | 35.0% |
| GGTGGAATCATAGTGAATGT+TGG | + | chr8_4:24226414-24226433 | Msa1320050:CDS | 40.0% | |
| CAATGAGGAGAATGAAGTTG+AGG | + | chr8_4:24227050-24227069 | Msa1320050:intron | 40.0% | |
| GCTTCTATAGGGGTAGTAAT+TGG | + | chr8_4:24227149-24227168 | Msa1320050:intron | 40.0% | |
| GTAGTAATTGGGTGACATTG+TGG | + | chr8_4:24227161-24227180 | Msa1320050:intron | 40.0% | |
| TAATTGGGTGACATTGTGGT+TGG | + | chr8_4:24227165-24227184 | Msa1320050:intron | 40.0% | |
| GAAAGACACTTGTGACATTG+TGG | - | chr8_4:24227212-24227231 | None:intergenic | 40.0% | |
| TACACTTGTGACATTGTGGT+TGG | + | chr8_4:24227267-24227286 | Msa1320050:intron | 40.0% | |
| CAACGATCTTGACCTATAGA+AGG | - | chr8_4:24227324-24227343 | None:intergenic | 40.0% | |
| !!! | GTCAAGATCGTTGTTTTTGG+TGG | + | chr8_4:24227331-24227350 | Msa1320050:intron | 40.0% |
| TGATGAGGTACGTCAAAAAG+TGG | - | chr8_4:24227360-24227379 | None:intergenic | 40.0% | |
| TGACGTACCTCATCATCAAT+AGG | + | chr8_4:24227365-24227384 | Msa1320050:intron | 40.0% | |
| GTACCTCATCATCAATAGGT+GGG | + | chr8_4:24227369-24227388 | Msa1320050:intron | 40.0% | |
| ACATGTTATGAACGCATGCT+TGG | + | chr8_4:24227405-24227424 | Msa1320050:intron | 40.0% | |
| CTCATGATCAACAGTGTTCA+AGG | - | chr8_4:24227432-24227451 | None:intergenic | 40.0% | |
| CTGTTGATCATGAGAGATAG+AGG | + | chr8_4:24227438-24227457 | Msa1320050:intron | 40.0% | |
| !! | TCGATGTGATTGATTTGACG+TGG | + | chr8_4:24227483-24227502 | Msa1320050:intron | 40.0% |
| !! | CGATGTGATTGATTTGACGT+GGG | + | chr8_4:24227484-24227503 | Msa1320050:intron | 40.0% |
| !! | TTGATAGTGCCCATTGTTAG+TGG | + | chr8_4:24227530-24227549 | Msa1320050:intron | 40.0% |
| ACCACACAACCACTAACAAT+GGG | - | chr8_4:24227542-24227561 | None:intergenic | 40.0% | |
| !!! | GGTTGATGAATTTTCAGCTC+TGG | + | chr8_4:24227562-24227581 | Msa1320050:intron | 40.0% |
| !! | TGATGAATTTTCAGCTCTGG+GGG | + | chr8_4:24227565-24227584 | Msa1320050:intron | 40.0% |
| !!! | AAGGAGATGCTGATTTTGCT+AGG | + | chr8_4:24227623-24227642 | Msa1320050:intron | 40.0% |
| !!! | AGGAGATGCTGATTTTGCTA+GGG | + | chr8_4:24227624-24227643 | Msa1320050:intron | 40.0% |
| CTATAGGCATAACTTCAACG+TGG | + | chr8_4:24227903-24227922 | Msa1320050:intron | 40.0% | |
| AAAGTGACAGAACATGTGCT+TGG | - | chr8_4:24227953-24227972 | None:intergenic | 40.0% | |
| TATCAAAGAGGTCCTCACAA+CGG | - | chr8_4:24228222-24228241 | None:intergenic | 40.0% | |
| ! | GGATTTGTGGTCTTTGAGAA+AGG | - | chr8_4:24228464-24228483 | None:intergenic | 40.0% |
| ! | GGATTTGTGGTCTTTGAGAA+AGG | - | chr8_4:24228464-24228483 | None:intergenic | 40.0% |
| ! | GGACCAAGAACAAGTACTTT+TGG | - | chr8_4:24228547-24228566 | None:intergenic | 40.0% |
| GGATGAATTGTTGCAGTGAT+AGG | - | chr8_4:24228642-24228661 | None:intergenic | 40.0% | |
| !! | TGTTGATGGATTGTGGTTGT+GGG | - | chr8_4:24228668-24228687 | None:intergenic | 40.0% |
| !! | TTGTTGATGGATTGTGGTTG+TGG | - | chr8_4:24228669-24228688 | None:intergenic | 40.0% |
| ! | AATATGGCGGGAATTGTTGA+TGG | - | chr8_4:24228682-24228701 | None:intergenic | 40.0% |
| ATATGCAGCGCTACAGAATA+TGG | - | chr8_4:24228698-24228717 | None:intergenic | 40.0% | |
| AATGTGATCAGTTCCAACAC+TGG | - | chr8_4:24228776-24228795 | None:intergenic | 40.0% | |
| TGTGAACCTTGTATCCAAGA+GGG | - | chr8_4:24228969-24228988 | None:intergenic | 40.0% | |
| ATGTGAACCTTGTATCCAAG+AGG | - | chr8_4:24228970-24228989 | None:intergenic | 40.0% | |
| CTTCTACTTGCTTCTCTTCA+AGG | - | chr8_4:24229101-24229120 | None:intergenic | 40.0% | |
| GAATATTAGTGTCTCGCTAC+TGG | - | chr8_4:24229146-24229165 | None:intergenic | 40.0% | |
| ! | CGAGTTGGAATTGTTGGATT+AGG | + | chr8_4:24229461-24229480 | Msa1320050:CDS | 40.0% |
| !! | TGGATTAGGAAGTATTGGCA+TGG | + | chr8_4:24229475-24229494 | Msa1320050:CDS | 40.0% |
| ! | AACGATGTCCTTTTGGCATT+AGG | + | chr8_4:24229668-24229687 | Msa1320050:CDS | 40.0% |
| TTGATGGAAGGAGAAATTGC+TGG | + | chr8_4:24229758-24229777 | Msa1320050:CDS | 40.0% | |
| GCTCTTTGCAATGGATAATG+TGG | + | chr8_4:24229826-24229845 | Msa1320050:CDS | 40.0% | |
| ACAGTAAAAGCTGCAGAATG+TGG | - | chr8_4:24229860-24229879 | None:intergenic | 40.0% | |
| CAGTTATCAACCAACTTCAC+TGG | - | chr8_4:24229959-24229978 | None:intergenic | 40.0% | |
| ! | ACTGATTCTCTCATGGGATT+AGG | + | chr8_4:24229975-24229994 | Msa1320050:exon | 40.0% |
| ATGTTGGCACTAGGAAAAGG+TGG | + | chr8_4:24226396-24226415 | Msa1320050:CDS | 45.0% | |
| GAAGTTACAACAGCTGCATG+TGG | - | chr8_4:24226579-24226598 | None:intergenic | 45.0% | |
| GATGGGTATTTGCCAACTTG+TGG | + | chr8_4:24226608-24226627 | Msa1320050:intron | 45.0% | |
| !! | AGTCTACTTGATAACGCGGT+GGG | - | chr8_4:24226754-24226773 | None:intergenic | 45.0% |
| !! | TAGTCTACTTGATAACGCGG+TGG | - | chr8_4:24226755-24226774 | None:intergenic | 45.0% |
| CATACAGTGAATGTACGCCA+CGG | - | chr8_4:24227112-24227131 | None:intergenic | 45.0% | |
| TGCGTCGAGATGCTTCTATA+GGG | + | chr8_4:24227138-24227157 | Msa1320050:intron | 45.0% | |
| GACACTTGTGACATTGTGGT+TGG | - | chr8_4:24227208-24227227 | None:intergenic | 45.0% | |
| ! | TTGGGTGACATTGGTGACAT+TGG | - | chr8_4:24227293-24227312 | None:intergenic | 45.0% |
| CGTACCTCATCATCAATAGG+TGG | + | chr8_4:24227368-24227387 | Msa1320050:intron | 45.0% | |
| !! | CATCCCACCTATTGATGATG+AGG | - | chr8_4:24227375-24227394 | None:intergenic | 45.0% |
| CATCAATAGGTGGGATGATG+TGG | + | chr8_4:24227378-24227397 | Msa1320050:intron | 45.0% | |
| !! | TGTGATTGATTTGACGTGGG+TGG | + | chr8_4:24227487-24227506 | Msa1320050:intron | 45.0% |
| CACCACACAACCACTAACAA+TGG | - | chr8_4:24227543-24227562 | None:intergenic | 45.0% | |
| CATTGTTAGTGGTTGTGTGG+TGG | + | chr8_4:24227541-24227560 | Msa1320050:intron | 45.0% | |
| GGAGTGGTCGTCCATTTAAT+CGG | + | chr8_4:24227598-24227617 | Msa1320050:intron | 45.0% | |
| GAGTGGTCGTCCATTTAATC+GGG | + | chr8_4:24227599-24227618 | Msa1320050:intron | 45.0% | |
| AGTGGTCGTCCATTTAATCG+GGG | + | chr8_4:24227600-24227619 | Msa1320050:intron | 45.0% | |
| CATCTCCTTCCCCGATTAAA+TGG | - | chr8_4:24227612-24227631 | None:intergenic | 45.0% | |
| !!! | GGAGATGCTGATTTTGCTAG+GGG | + | chr8_4:24227625-24227644 | Msa1320050:intron | 45.0% |
| !!! | GAGATGCTGATTTTGCTAGG+GGG | + | chr8_4:24227626-24227645 | Msa1320050:intron | 45.0% |
| TTGACTCACTCGTAAGATCG+TGG | + | chr8_4:24228182-24228201 | Msa1320050:intron | 45.0% | |
| ! | AAGGTTGAGAAGCATGTTGG+TGG | - | chr8_4:24228568-24228587 | None:intergenic | 45.0% |
| ! | TCGAAGGTTGAGAAGCATGT+TGG | - | chr8_4:24228571-24228590 | None:intergenic | 45.0% |
| GTGAGAGTAGAGTGATTCGA+AGG | - | chr8_4:24228587-24228606 | None:intergenic | 45.0% | |
| ! | ATGGATTGTGGTTGTGGGAA+AGG | - | chr8_4:24228663-24228682 | None:intergenic | 45.0% |
| !! | CGGGAATTGTTGATGGATTG+TGG | - | chr8_4:24228675-24228694 | None:intergenic | 45.0% |
| TATCCAAGAGGGAAATCCCA+AGG | - | chr8_4:24228958-24228977 | None:intergenic | 45.0% | |
| GGATTTCCCTCTTGGATACA+AGG | + | chr8_4:24228960-24228979 | Msa1320050:CDS | 45.0% | |
| ACTTGCTTCTCTTCAAGGTC+TGG | - | chr8_4:24229096-24229115 | None:intergenic | 45.0% | |
| GCGCAACAAACATGCACTTA+AGG | + | chr8_4:24229405-24229424 | Msa1320050:intron | 45.0% | |
| TAGTTATCAGGCAAGCGAGT+TGG | + | chr8_4:24229446-24229465 | Msa1320050:intron | 45.0% | |
| !! | AGAAATTGCTGGTGCTGGTT+TGG | + | chr8_4:24229769-24229788 | Msa1320050:CDS | 45.0% |
| AGTTTGTGTGAACTTGTGGC+AGG | + | chr8_4:24229893-24229912 | Msa1320050:CDS | 45.0% | |
| GTTTGTGTGAACTTGTGGCA+GGG | + | chr8_4:24229894-24229913 | Msa1320050:CDS | 45.0% | |
| !!! | AAATTTTAGTTATTTTTATA+TGG | + | chr8_4:24226959-24226978 | Msa1320050:intron | 5.0% |
| ! | GATGATGAGATTGGAGGTGC+TGG | + | chr8_4:24226483-24226502 | Msa1320050:CDS | 50.0% |
| !! | TGAGATTGGAGGTGCTGGTT+TGG | + | chr8_4:24226488-24226507 | Msa1320050:CDS | 50.0% |
| CAACAGCTGCATGTGGTGAA+AGG | - | chr8_4:24226572-24226591 | None:intergenic | 50.0% | |
| !! | TTGATAACGCGGTGGGATGA+AGG | - | chr8_4:24226747-24226766 | None:intergenic | 50.0% |
| GTTCAGTCGAGTCGTCAATG+AGG | + | chr8_4:24227035-24227054 | Msa1320050:intron | 50.0% | |
| CTGCGTCGAGATGCTTCTAT+AGG | + | chr8_4:24227137-24227156 | Msa1320050:intron | 50.0% | |
| GCGTCGAGATGCTTCTATAG+GGG | + | chr8_4:24227139-24227158 | Msa1320050:intron | 50.0% | |
| !! | GATTGATTTGACGTGGGTGG+TGG | + | chr8_4:24227490-24227509 | Msa1320050:intron | 50.0% |
| GCCCATTGTTAGTGGTTGTG+TGG | + | chr8_4:24227538-24227557 | Msa1320050:intron | 50.0% | |
| !!! | TGAATTTTCAGCTCTGGGGG+AGG | + | chr8_4:24227568-24227587 | Msa1320050:intron | 50.0% |
| GTCGTCCATTTAATCGGGGA+AGG | + | chr8_4:24227604-24227623 | Msa1320050:intron | 50.0% | |
| TTCCTAAACCCCAAACCCTC+AGG | + | chr8_4:24228616-24228635 | Msa1320050:CDS | 50.0% | |
| AGTGATAGGCCTGAGGGTTT+GGG | - | chr8_4:24228628-24228647 | None:intergenic | 50.0% | |
| TGTTGCAGTGATAGGCCTGA+GGG | - | chr8_4:24228634-24228653 | None:intergenic | 50.0% | |
| TTGTTGCAGTGATAGGCCTG+AGG | - | chr8_4:24228635-24228654 | None:intergenic | 50.0% | |
| TGCAGCGCTACAGAATATGG+CGG | - | chr8_4:24228695-24228714 | None:intergenic | 50.0% | |
| GTTGAGAACGTCGGTAGTGA+TGG | - | chr8_4:24228722-24228741 | None:intergenic | 50.0% | |
| GGGAAGAAGGTTGAGAACGT+CGG | - | chr8_4:24228731-24228750 | None:intergenic | 50.0% | |
| CAACACTGGAGGTGACAACA+AGG | - | chr8_4:24228762-24228781 | None:intergenic | 50.0% | |
| ! | CTTGTTGTCACCTCCAGTGT+TGG | + | chr8_4:24228760-24228779 | Msa1320050:CDS | 50.0% |
| GTGATCAGTTCCAACACTGG+AGG | - | chr8_4:24228773-24228792 | None:intergenic | 50.0% | |
| ! | AGGAGTTTTCTCGGAGGATG+TGG | + | chr8_4:24228843-24228862 | Msa1320050:CDS | 50.0% |
| ! | CGTTGCTGATTGCTGTCATG+AGG | + | chr8_4:24228881-24228900 | Msa1320050:CDS | 50.0% |
| GCTGATTGCTGTCATGAGGA+AGG | + | chr8_4:24228885-24228904 | Msa1320050:CDS | 50.0% | |
| TGCTGTCATGAGGAAGGTGA+CGG | + | chr8_4:24228891-24228910 | Msa1320050:CDS | 50.0% | |
| ATCGATATGTGAGGAGGTGG+CGG | + | chr8_4:24228920-24228939 | Msa1320050:CDS | 50.0% | |
| GATCCTTGGGATTTCCCTCT+TGG | + | chr8_4:24228952-24228971 | Msa1320050:CDS | 50.0% | |
| TCTCGCTACTGGTAAGAACG+AGG | - | chr8_4:24229135-24229154 | None:intergenic | 50.0% | |
| ! | GGCAAGCGAGTTGGAATTGT+TGG | + | chr8_4:24229455-24229474 | Msa1320050:CDS | 50.0% |
| AACTTCTAGCGACGCACTTG+TGG | + | chr8_4:24229604-24229623 | Msa1320050:CDS | 50.0% | |
| GAAGGAGAAATTGCTGGTGC+TGG | + | chr8_4:24229764-24229783 | Msa1320050:CDS | 50.0% | |
| TCACACACGACATCCTGCCA+CGG | - | chr8_4:24227089-24227108 | None:intergenic | 55.0% | |
| AGAGGTCCTCACAACGGCAT+CGG | - | chr8_4:24228216-24228235 | None:intergenic | 55.0% | |
| ! | CCTCATCTAACGGACACCCT+CGG | + | chr8_4:24228294-24228313 | Msa1320050:intron | 55.0% |
| GTGATAGGCCTGAGGGTTTG+GGG | - | chr8_4:24228627-24228646 | None:intergenic | 55.0% | |
| CAGTGATAGGCCTGAGGGTT+TGG | - | chr8_4:24228629-24228648 | None:intergenic | 55.0% | |
| GCAGCGCTACAGAATATGGC+GGG | - | chr8_4:24228694-24228713 | None:intergenic | 55.0% | |
| GTGACAACAAGGCTGAGCGA+GGG | - | chr8_4:24228751-24228770 | None:intergenic | 55.0% | |
| CTGAATGAATGCCGTCGTCG+CGG | + | chr8_4:24228799-24228818 | Msa1320050:CDS | 55.0% | |
| CAACCTGAATTCCGCGACGA+CGG | - | chr8_4:24228813-24228832 | None:intergenic | 55.0% | |
| CGAGAAAACTCCTCCAGCAC+CGG | - | chr8_4:24228836-24228855 | None:intergenic | 55.0% | |
| !! | CGGTGCTGGAGGAGTTTTCT+CGG | + | chr8_4:24228834-24228853 | Msa1320050:CDS | 55.0% |
| ! | TGCTGGAGGAGTTTTCTCGG+AGG | + | chr8_4:24228837-24228856 | Msa1320050:CDS | 55.0% |
| CTCGGAGGATGTGGCTGATA+TGG | + | chr8_4:24228852-24228871 | Msa1320050:CDS | 55.0% | |
| GGAGGATGTGGCTGATATGG+CGG | + | chr8_4:24228855-24228874 | Msa1320050:CDS | 55.0% | |
| ! | TGTCATGAGGAAGGTGACGG+TGG | + | chr8_4:24228894-24228913 | Msa1320050:CDS | 55.0% |
| ! | TGGCGGATCGATATGTGAGG+AGG | + | chr8_4:24228914-24228933 | Msa1320050:CDS | 55.0% |
| CGGATCGATATGTGAGGAGG+TGG | + | chr8_4:24228917-24228936 | Msa1320050:CDS | 55.0% | |
| TCGATATGTGAGGAGGTGGC+GGG | + | chr8_4:24228921-24228940 | Msa1320050:CDS | 55.0% | |
| GCGGGAACGTTCTGATCCTT+GGG | + | chr8_4:24228939-24228958 | Msa1320050:CDS | 55.0% | |
| GAGGATGTCGTGTGTGACCG+TGG | + | chr8_4:24227069-24227088 | Msa1320050:intron | 60.0% | |
| ATGTCGTGTGTGACCGTGGC+AGG | + | chr8_4:24227073-24227092 | Msa1320050:intron | 60.0% | |
| CAGGATGTCGTGTGTGACCG+TGG | + | chr8_4:24227092-24227111 | Msa1320050:intron | 60.0% | |
| ! | ACGTGGGTGGTGGCGAAAAC+AGG | + | chr8_4:24227500-24227519 | Msa1320050:intron | 60.0% |
| !! | AGCTCTGGGGGAGGAGAAAG+AGG | + | chr8_4:24227577-24227596 | Msa1320050:intron | 60.0% |
| TGGGGGAGGAGAAAGAGGAG+TGG | + | chr8_4:24227582-24227601 | Msa1320050:intron | 60.0% | |
| CAACACCCGATGCCGTTGTG+AGG | + | chr8_4:24228207-24228226 | Msa1320050:intron | 60.0% | |
| GAGGTCCTCACAACGGCATC+GGG | - | chr8_4:24228215-24228234 | None:intergenic | 60.0% | |
| !! | CCGAGGGTGTCCGTTAGATG+AGG | - | chr8_4:24228297-24228316 | None:intergenic | 60.0% |
| ! | GGCCTGAGGGTTTGGGGTTT+AGG | - | chr8_4:24228621-24228640 | None:intergenic | 60.0% |
| CAAGGCTGAGCGAGGGAAGA+AGG | - | chr8_4:24228744-24228763 | None:intergenic | 60.0% | |
| GGTGACAACAAGGCTGAGCG+AGG | - | chr8_4:24228752-24228771 | None:intergenic | 60.0% | |
| CGCGACGACGGCATTCATTC+AGG | - | chr8_4:24228801-24228820 | None:intergenic | 60.0% | |
| ATGCCGTCGTCGCGGAATTC+AGG | + | chr8_4:24228807-24228826 | Msa1320050:CDS | 60.0% | |
| !! | CGTCGCGGAATTCAGGTTGC+CGG | + | chr8_4:24228814-24228833 | Msa1320050:CDS | 60.0% |
| !! | GGAATTCAGGTTGCCGGTGC+TGG | + | chr8_4:24228820-24228839 | Msa1320050:CDS | 60.0% |
| !! | ATTCAGGTTGCCGGTGCTGG+AGG | + | chr8_4:24228823-24228842 | Msa1320050:CDS | 60.0% |
| ! | CATGAGGAAGGTGACGGTGG+CGG | + | chr8_4:24228897-24228916 | Msa1320050:CDS | 60.0% |
| !! | CGGTGGCGGATCGATATGTG+AGG | + | chr8_4:24228911-24228930 | Msa1320050:CDS | 60.0% |
| GGCGGGAACGTTCTGATCCT+TGG | + | chr8_4:24228938-24228957 | Msa1320050:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 24226396 | 24230003 | 24226396 | ID=Msa1320050;Name=Msa1320050 |
| chr8_4 | mRNA | 24226396 | 24230003 | 24226396 | ID=Msa1320050-mRNA-1;Parent=Msa1320050;Name=Msa1320050-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.33|1|0.5|0.66|3|24|418 |
| chr8_4 | exon | 24226396 | 24226612 | 24226396 | ID=Msa1320050-mRNA-1:exon:8335;Parent=Msa1320050-mRNA-1 |
| chr8_4 | exon | 24228473 | 24228981 | 24228473 | ID=Msa1320050-mRNA-1:exon:8336;Parent=Msa1320050-mRNA-1 |
| chr8_4 | exon | 24229449 | 24230003 | 24229449 | ID=Msa1320050-mRNA-1:exon:8337;Parent=Msa1320050-mRNA-1 |
| chr8_4 | CDS | 24226396 | 24226612 | 24226396 | ID=Msa1320050-mRNA-1:cds;Parent=Msa1320050-mRNA-1 |
| chr8_4 | CDS | 24228473 | 24228981 | 24228473 | ID=Msa1320050-mRNA-1:cds;Parent=Msa1320050-mRNA-1 |
| chr8_4 | CDS | 24229449 | 24229979 | 24229449 | ID=Msa1320050-mRNA-1:cds;Parent=Msa1320050-mRNA-1 |
| chr8_4 | three_prime_UTR | 24229980 | 24230003 | 24229980 | ID=Msa1320050-mRNA-1:three_prime_utr;Parent=Msa1320050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
