Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320750 | sp|Q9SJT1|SAE2_ARATH | 78.435 | 524 | 112 | 1 | 4 | 526 | 8 | 531 | 0.0 | 879 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320750 | A0A072TPF5 | 98.898 | 635 | 7 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1295 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117710 | Msa1320750 | 0.807218 | 5.626679e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320750 | MtrunA17_Chr8g0352371 | 98.898 | 635 | 7 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1295 |
| Msa1320750 | MtrunA17_Chr4g0074481 | 41.711 | 187 | 92 | 3 | 9 | 180 | 48 | 232 | 1.92e-39 | 150 |
| Msa1320750 | MtrunA17_Chr0c01g0489601 | 29.139 | 453 | 254 | 14 | 6 | 405 | 210 | 648 | 9.47e-37 | 146 |
| Msa1320750 | MtrunA17_Chr5g0431171 | 40.217 | 184 | 102 | 2 | 6 | 181 | 493 | 676 | 8.64e-33 | 135 |
| Msa1320750 | MtrunA17_Chr5g0431151 | 40.659 | 182 | 100 | 2 | 8 | 181 | 496 | 677 | 2.47e-30 | 127 |
| Msa1320750 | MtrunA17_Chr5g0444711 | 28.105 | 153 | 108 | 2 | 9 | 160 | 91 | 242 | 1.43e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320750 | AT2G21470.1 | 72.375 | 619 | 153 | 5 | 4 | 621 | 8 | 609 | 0.0 | 912 |
| Msa1320750 | AT2G21470.3 | 72.026 | 622 | 153 | 6 | 4 | 621 | 8 | 612 | 0.0 | 905 |
| Msa1320750 | AT2G21470.2 | 78.435 | 524 | 112 | 1 | 4 | 526 | 8 | 531 | 0.0 | 879 |
| Msa1320750 | AT5G19180.1 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 3.81e-39 | 150 |
| Msa1320750 | AT5G19180.2 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 5.20e-39 | 149 |
| Msa1320750 | AT5G06460.1 | 39.674 | 184 | 103 | 2 | 6 | 181 | 487 | 670 | 5.81e-32 | 133 |
| Msa1320750 | AT2G30110.1 | 40.761 | 184 | 101 | 2 | 6 | 181 | 490 | 673 | 1.05e-29 | 126 |
| Msa1320750 | AT5G55130.1 | 29.560 | 159 | 109 | 3 | 3 | 160 | 87 | 243 | 5.15e-18 | 87.8 |
| Msa1320750 | AT1G05350.1 | 28.235 | 170 | 96 | 4 | 6 | 154 | 80 | 244 | 6.06e-14 | 74.7 |
| Msa1320750 | AT5G55130.2 | 26.950 | 141 | 99 | 3 | 23 | 160 | 77 | 216 | 2.37e-12 | 70.1 |
| Msa1320750 | AT5G55130.3 | 26.154 | 130 | 94 | 2 | 32 | 160 | 11 | 139 | 1.83e-11 | 66.6 |
| Msa1320750 | AT2G32410.2 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 2.00e-11 | 67.0 |
| Msa1320750 | AT2G32410.3 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 2.68e-11 | 66.6 |
| Msa1320750 | AT2G32410.1 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 5.69e-11 | 65.9 |
Find 129 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATTTGATCACGTATT+TGG | 0.071426 | 8_4:+25546821 | Msa1320750:CDS |
| CAATTTAATGTTGTTCTTAA+TGG | 0.121606 | 8_4:+25545031 | Msa1320750:CDS |
| AGTTTCTGCCATGTCATCTT+TGG | 0.181999 | 8_4:+25546994 | Msa1320750:CDS |
| AATTTAATGTTGTTCTTAAT+GGG | 0.285173 | 8_4:+25545032 | Msa1320750:CDS |
| ATGCTCGATGGGAATTTAGA+TGG | 0.308432 | 8_4:+25549449 | Msa1320750:CDS |
| GTAGAGGTTTGGCGATTCTT+TGG | 0.322009 | 8_4:+25549552 | Msa1320750:three_prime_UTR |
| CTCAAAACTCTTGCTCTCTC+TGG | 0.324705 | 8_4:+25543451 | Msa1320750:CDS |
| TGAAGAACCCGCAAGATATC+TGG | 0.325240 | 8_4:+25547020 | Msa1320750:CDS |
| GTTTCTGCCATGTCATCTTT+GGG | 0.331041 | 8_4:+25546995 | Msa1320750:CDS |
| AAATATTTGATCACGTATTT+GGG | 0.339346 | 8_4:+25546822 | Msa1320750:CDS |
| GATGAAGACATCGGTCAATA+TGG | 0.341758 | 8_4:+25546794 | Msa1320750:CDS |
| GAGCTTCCTTCTCCTGTAAC+TGG | 0.354131 | 8_4:+25548941 | Msa1320750:CDS |
| AAAATGACATTAAAAGTTAT+AGG | 0.357518 | 8_4:+25547425 | Msa1320750:CDS |
| AACATACGTGCTGCTTCATT+TGG | 0.360112 | 8_4:+25547283 | Msa1320750:CDS |
| TTTGAAGCTAAAGGAATTGC+TGG | 0.366032 | 8_4:+25547325 | Msa1320750:CDS |
| ATGGTTGGTGCTGGTGGAAT+TGG | 0.366549 | 8_4:+25543418 | Msa1320750:CDS |
| ACAACAAATGCTGTTATTGC+TGG | 0.369447 | 8_4:+25547370 | Msa1320750:CDS |
| GGCGATTCTTTGGCCATAAC+CGG | 0.370821 | 8_4:+25549562 | Msa1320750:three_prime_UTR |
| TCCTTGATGTATATAGGTTT+AGG | 0.374063 | 8_4:-25546899 | None:intergenic |
| CATGATTTGTTAGGCTCAAA+TGG | 0.375091 | 8_4:-25548553 | None:intergenic |
| CAAACATAACATGATTTGTT+AGG | 0.378706 | 8_4:-25548562 | None:intergenic |
| CACTCAACCCTCAATTTCAA+TGG | 0.379525 | 8_4:+25543280 | Msa1320750:exon |
| GGATGTCCTGTCTGATGAAT+TGG | 0.384417 | 8_4:+25546919 | Msa1320750:CDS |
| GTGTTTATTTCAAGCAATAC+AGG | 0.388272 | 8_4:-25548685 | None:intergenic |
| TATGTCTTTGGAGCTGGTTT+AGG | 0.388767 | 8_4:-25546227 | None:intergenic |
| GTACAGACTGGATATGTCTT+TGG | 0.400617 | 8_4:-25546239 | None:intergenic |
| GCAGCATACCTAACCGGTTA+TGG | 0.407720 | 8_4:-25549575 | None:intergenic |
| AACTTCTGTTAACTAATATC+AGG | 0.408324 | 8_4:-25549730 | None:intergenic |
| AGGACATCCTTGATGTATAT+AGG | 0.412817 | 8_4:-25546905 | None:intergenic |
| TTAGTTGAAAGTGGAACTAC+TGG | 0.412993 | 8_4:+25545115 | Msa1320750:CDS |
| GGATAAACAGAATGGAAATC+TGG | 0.413162 | 8_4:+25546940 | Msa1320750:CDS |
| TCACATGTCGCCGTGCATCT+AGG | 0.421302 | 8_4:-25545063 | None:intergenic |
| ATATGATGTAATGTTTATCT+TGG | 0.423235 | 8_4:-25544963 | None:intergenic |
| AAACCAACACATACCTTTGA+TGG | 0.425453 | 8_4:-25546275 | None:intergenic |
| AGCATTGTACCACCAGTTAC+AGG | 0.426441 | 8_4:-25548953 | None:intergenic |
| TAAGACTCCAGATATCTTGC+GGG | 0.426595 | 8_4:-25547027 | None:intergenic |
| AAAATTTATGAGAGAGAAAG+AGG | 0.428612 | 8_4:-25543225 | None:intergenic |
| TTAGAATGCAAGTTCTCAAC+CGG | 0.432873 | 8_4:-25549518 | None:intergenic |
| ATATTAACTTACTTTAGCCT+TGG | 0.442247 | 8_4:-25544842 | None:intergenic |
| AAGAAGTCCACATTGAAATC+AGG | 0.442885 | 8_4:-25545004 | None:intergenic |
| GGAAGAAGCCATTGAAATTG+AGG | 0.443022 | 8_4:-25543288 | None:intergenic |
| GATGTTCCTTTAGTTGAAAG+TGG | 0.443027 | 8_4:+25545106 | Msa1320750:CDS |
| CACAAACCGTTCAAAGTTGA+AGG | 0.445330 | 8_4:+25548705 | Msa1320750:CDS |
| GTAGTTCCACTTTCAACTAA+AGG | 0.445658 | 8_4:-25545112 | None:intergenic |
| TGTTTCGACAATCTCATGTT+GGG | 0.447258 | 8_4:+25544815 | Msa1320750:CDS |
| GATTGTCATTGAAGCAATCA+AGG | 0.448464 | 8_4:+25547396 | Msa1320750:CDS |
| AACTACTGGGTTCCTTGGTC+AGG | 0.453865 | 8_4:+25545129 | Msa1320750:CDS |
| TTCTTTGGCCATAACCGGTT+AGG | 0.463668 | 8_4:+25549567 | Msa1320750:three_prime_UTR |
| ATAAGCAGAGTGTTTCTTGC+TGG | 0.467423 | 8_4:-25548520 | None:intergenic |
| ACTGGATATGTCTTTGGAGC+TGG | 0.467879 | 8_4:-25546233 | None:intergenic |
| TTAGGCTCAAATGGCTCCAC+TGG | 0.469251 | 8_4:-25548544 | None:intergenic |
| AAGATCATCAAGGCTAAGCT+TGG | 0.472669 | 8_4:+25548739 | Msa1320750:CDS |
| TAATGTTGTTCTTAATGGGC+TGG | 0.473444 | 8_4:+25545036 | Msa1320750:CDS |
| TCGCAGAATGACATATTGTC+TGG | 0.476359 | 8_4:+25548492 | Msa1320750:intron |
| AAGTCCTCAACCAGGTTGCT+AGG | 0.477793 | 8_4:+25544918 | Msa1320750:intron |
| TTATAATGCCAACCTTGAAA+AGG | 0.483006 | 8_4:+25548840 | Msa1320750:CDS |
| CTAGTAGCAGCATACCTAAC+CGG | 0.483967 | 8_4:-25549581 | None:intergenic |
| TTGTGCACGAACTATTAATC+CGG | 0.488584 | 8_4:+25549499 | Msa1320750:three_prime_UTR |
| AATGATAATGCTTGTGGCGA+TGG | 0.491355 | 8_4:+25546965 | Msa1320750:CDS |
| GTTGAGTGAGAAGAAGTTGA+AGG | 0.494967 | 8_4:-25543265 | None:intergenic |
| CAACATCCTTCAACTTTGAA+CGG | 0.496977 | 8_4:-25548711 | None:intergenic |
| AACCAACACATACCTTTGAT+GGG | 0.507387 | 8_4:-25546274 | None:intergenic |
| AAAGTTCTCATGGTTGGTGC+TGG | 0.510374 | 8_4:+25543409 | Msa1320750:CDS |
| TTCGAATTATCAGAATCATC+AGG | 0.510491 | 8_4:-25549362 | None:intergenic |
| GTTTATCCAATTCATCAGAC+AGG | 0.510714 | 8_4:-25546925 | None:intergenic |
| GAAGAAGCCATTGAAATTGA+GGG | 0.511407 | 8_4:-25543287 | None:intergenic |
| TGCTCGATGGGAATTTAGAT+GGG | 0.511557 | 8_4:+25549450 | Msa1320750:CDS |
| TCAGGATGCAAAAGTTCTCA+TGG | 0.512135 | 8_4:+25543399 | Msa1320750:intron |
| CTTTGTCCAATGAGGAGACA+TGG | 0.515275 | 8_4:+25546861 | Msa1320750:CDS |
| AGTGGAACTACTGGGTTCCT+TGG | 0.519409 | 8_4:+25545124 | Msa1320750:CDS |
| TAACAAATTCTACAGCCAAC+TGG | 0.522537 | 8_4:-25547249 | None:intergenic |
| TTGTTTCGACAATCTCATGT+TGG | 0.522739 | 8_4:+25544814 | Msa1320750:CDS |
| ATTCTTGCTGACTCTGACAG+AGG | 0.523698 | 8_4:+25549676 | Msa1320750:three_prime_UTR |
| ATGATCTTGTCATGCTCGAT+GGG | 0.524523 | 8_4:+25549438 | Msa1320750:CDS |
| AGATCATCAAGGCTAAGCTT+GGG | 0.526278 | 8_4:+25548740 | Msa1320750:CDS |
| GTTCTCATGGTTGGTGCTGG+TGG | 0.527023 | 8_4:+25543412 | Msa1320750:CDS |
| TTTGAAGCATTCATAACAAG+TGG | 0.529740 | 8_4:-25548772 | None:intergenic |
| TCTGAAAATGATGATGATGT+TGG | 0.533388 | 8_4:+25549308 | Msa1320750:CDS |
| CTATGAAGCTGGTGATATTG+AGG | 0.533747 | 8_4:+25548801 | Msa1320750:CDS |
| ACATGTGAATCGTTTGTGCT+TGG | 0.533993 | 8_4:+25545078 | Msa1320750:CDS |
| TATGATGTAATGTTTATCTT+GGG | 0.534382 | 8_4:-25544962 | None:intergenic |
| GATGAATTGGATAAACAGAA+TGG | 0.535107 | 8_4:+25546932 | Msa1320750:CDS |
| TCAAACCTCCTCTATGAAGC+TGG | 0.536148 | 8_4:+25548790 | Msa1320750:CDS |
| CCTGAGAGTACCATACCATC+AGG | 0.536555 | 8_4:-25549191 | None:intergenic |
| ATCATGTTATGTTTGTTCTG+AGG | 0.544345 | 8_4:+25548570 | Msa1320750:CDS |
| AGAGAAAGAACCTGATGGTA+TGG | 0.546467 | 8_4:+25549181 | Msa1320750:CDS |
| TGCTGTTATTGGTGCGTCTG+AGG | 0.548448 | 8_4:-25549276 | None:intergenic |
| TGAATTAGCTTTGTCCAATG+AGG | 0.549430 | 8_4:+25546853 | Msa1320750:CDS |
| CTAAGACTCCAGATATCTTG+CGG | 0.551875 | 8_4:-25547028 | None:intergenic |
| AGTCCTCAACCAGGTTGCTA+GGG | 0.552690 | 8_4:+25544919 | Msa1320750:intron |
| CCTGATGGTATGGTACTCTC+AGG | 0.555999 | 8_4:+25549191 | Msa1320750:CDS |
| CAGGAGAAGGAAGCTCAGCT+AGG | 0.563041 | 8_4:-25548934 | None:intergenic |
| CAGGTTACAGTTCATGTCAA+AGG | 0.563874 | 8_4:+25546179 | Msa1320750:intron |
| GCAACATTAACATAAAGCAC+AGG | 0.567973 | 8_4:+25549008 | Msa1320750:CDS |
| ATCTCATGTTGGGCAGTCCA+AGG | 0.572346 | 8_4:+25544825 | Msa1320750:CDS |
| TGATGTTGGTATAATTTCTC+CGG | 0.575254 | 8_4:+25549322 | Msa1320750:CDS |
| CTTCATGCCCAAAGATGACA+TGG | 0.576049 | 8_4:-25547002 | None:intergenic |
| AAGCATTCATAACAAGTGGA+AGG | 0.577024 | 8_4:-25548768 | None:intergenic |
| CGAATACTGCTGATGACGAA+AGG | 0.577207 | 8_4:+25549381 | Msa1320750:CDS |
| GATGATCTTGTCATGCTCGA+TGG | 0.578942 | 8_4:+25549437 | Msa1320750:CDS |
| AAATTTATGAGAGAGAAAGA+GGG | 0.580793 | 8_4:-25543224 | None:intergenic |
| CAATATCACCAGCTTCATAG+AGG | 0.585950 | 8_4:-25548798 | None:intergenic |
| ACCTAAACCTATATACATCA+AGG | 0.587437 | 8_4:+25546898 | Msa1320750:CDS |
| TGGTACAATGCTTACAGTAG+AGG | 0.589747 | 8_4:+25548964 | Msa1320750:CDS |
| AGTTTGTTCACTGTATTGTG+TGG | 0.591410 | 8_4:+25546648 | Msa1320750:intron |
| GGCTGGACAACCTAGATGCA+CGG | 0.596414 | 8_4:+25545053 | Msa1320750:CDS |
| GAAGACAAATCTGTTAGTAA+CGG | 0.601754 | 8_4:+25549245 | Msa1320750:CDS |
| GTACCACCAGTTACAGGAGA+AGG | 0.604017 | 8_4:-25548947 | None:intergenic |
| CTTCCTTCTCCTGTAACTGG+TGG | 0.604762 | 8_4:+25548944 | Msa1320750:CDS |
| TATCACAAGTACCCCATCAA+AGG | 0.606863 | 8_4:+25546262 | Msa1320750:CDS |
| ATGGTATGGTACTCTCAGGA+TGG | 0.606940 | 8_4:+25549195 | Msa1320750:CDS |
| GTTTGTTCACTGTATTGTGT+GGG | 0.608652 | 8_4:+25546649 | Msa1320750:intron |
| TATCACCAGCTTCATAGAGG+AGG | 0.611607 | 8_4:-25548795 | None:intergenic |
| GATGCAAAAGTTCTCATGGT+TGG | 0.612790 | 8_4:+25543403 | Msa1320750:CDS |
| TCTCAATGTGCAGATTGACA+TGG | 0.615008 | 8_4:+25544756 | Msa1320750:intron |
| CTGGATAATGATAATGCTTG+TGG | 0.617844 | 8_4:+25546959 | Msa1320750:CDS |
| TGTTGTCGAAAAGATCATCA+AGG | 0.630051 | 8_4:+25548729 | Msa1320750:CDS |
| ACAATTAAATTACCTGACCA+AGG | 0.630077 | 8_4:-25545141 | None:intergenic |
| TAGTTGAAAGTGGAACTACT+GGG | 0.633402 | 8_4:+25545116 | Msa1320750:CDS |
| GTACTTGTGATAGTACAGAC+TGG | 0.633652 | 8_4:-25546251 | None:intergenic |
| AAACACTCTGCTTATGCCAG+TGG | 0.641266 | 8_4:+25548528 | Msa1320750:CDS |
| ACCAACACATACCTTTGATG+GGG | 0.643072 | 8_4:-25546273 | None:intergenic |
| CTTTGATAAAGATGACCAGT+TGG | 0.646072 | 8_4:+25547234 | Msa1320750:CDS |
| GATGAAGAGAAAGAACCTGA+TGG | 0.659929 | 8_4:+25549176 | Msa1320750:CDS |
| CTGCCAAAGAGAAAAGCACA+AGG | 0.660319 | 8_4:-25549641 | None:intergenic |
| CATAGCAAAGATGAAGACAT+CGG | 0.681737 | 8_4:+25546785 | Msa1320750:CDS |
| TGGTAACATTGTGCATGCTG+TGG | 0.683906 | 8_4:+25547345 | Msa1320750:CDS |
| CAAAGATCCTGATTTCAATG+TGG | 0.694264 | 8_4:+25544997 | Msa1320750:CDS |
| TGGTGATATTGAGGATGACA+TGG | 0.698545 | 8_4:+25548810 | Msa1320750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGAAATTTTGAATTT+TGG | + | chr8_4:25543539-25543558 | Msa1320750:intron | 10.0% |
| !!! | TTTTAATTAAATTGTTGTAT+TGG | + | chr8_4:25543798-25543817 | Msa1320750:intron | 10.0% |
| !! | AGTAAAAATTACTTTGATAA+TGG | - | chr8_4:25543312-25543331 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTGGATTTTTTT+AGG | + | chr8_4:25543550-25543569 | Msa1320750:intron | 15.0% |
| !!! | TTGAATTTTGGATTTTTTTA+GGG | + | chr8_4:25543551-25543570 | Msa1320750:intron | 15.0% |
| !!! | ATAAGACTCATTTTAATTAA+GGG | + | chr8_4:25544124-25544143 | Msa1320750:intron | 15.0% |
| !! | AATTTAATGTTGTTCTTAAT+GGG | + | chr8_4:25545032-25545051 | Msa1320750:CDS | 15.0% |
| !!! | GTTAGTGATATAATTTTTAT+TGG | + | chr8_4:25546153-25546172 | Msa1320750:intron | 15.0% |
| !!! | ATATAATTTTTATTGGAAAC+AGG | + | chr8_4:25546160-25546179 | Msa1320750:intron | 15.0% |
| !! | AAAATGACATTAAAAGTTAT+AGG | + | chr8_4:25547425-25547444 | Msa1320750:CDS | 15.0% |
| !!! | GTTATTTGGATTTATTTTAT+AGG | + | chr8_4:25547786-25547805 | Msa1320750:intron | 15.0% |
| !!! | CTTTTTATTCTAATCTTATT+TGG | + | chr8_4:25548464-25548483 | Msa1320750:intron | 15.0% |
| !!! | TACTTCCTTTTTGTTTTTTT+AGG | + | chr8_4:25543499-25543518 | Msa1320750:intron | 20.0% |
| !!! | ACTTCCTTTTTGTTTTTTTA+GGG | + | chr8_4:25543500-25543519 | Msa1320750:intron | 20.0% |
| !! | AAAACCCTAAAAAAACAAAA+AGG | - | chr8_4:25543507-25543526 | None:intergenic | 20.0% |
| !!! | TAGTAAAGTTTTGAACTTTA+TGG | + | chr8_4:25543605-25543624 | Msa1320750:intron | 20.0% |
| !!! | AGTAAAGTTTTGAACTTTAT+GGG | + | chr8_4:25543606-25543625 | Msa1320750:intron | 20.0% |
| !!! | AACTGTTTTGAGTTTTTAAT+TGG | + | chr8_4:25543747-25543766 | Msa1320750:intron | 20.0% |
| !!! | ACTCTATTGTTTGTTTTAAT+TGG | + | chr8_4:25543885-25543904 | Msa1320750:intron | 20.0% |
| !!! | CTCTATTGTTTGTTTTAATT+GGG | + | chr8_4:25543886-25543905 | Msa1320750:intron | 20.0% |
| !!! | TCTATTGTTTGTTTTAATTG+GGG | + | chr8_4:25543887-25543906 | Msa1320750:intron | 20.0% |
| !!! | TTTTTTGGTATTGGATTTTA+AGG | + | chr8_4:25543914-25543933 | Msa1320750:intron | 20.0% |
| !!! | GATAAGACTCATTTTAATTA+AGG | + | chr8_4:25544123-25544142 | Msa1320750:intron | 20.0% |
| !! | TATATTAACCCTGTTATTAT+TGG | + | chr8_4:25544188-25544207 | Msa1320750:intron | 20.0% |
| !! | ATATTAACCCTGTTATTATT+GGG | + | chr8_4:25544189-25544208 | Msa1320750:intron | 20.0% |
| !!! | TTTCTTTTGAATTATCTATG+TGG | + | chr8_4:25544687-25544706 | Msa1320750:intron | 20.0% |
| !! | TATGATGTAATGTTTATCTT+GGG | - | chr8_4:25544965-25544984 | None:intergenic | 20.0% |
| !! | ATATGATGTAATGTTTATCT+TGG | - | chr8_4:25544966-25544985 | None:intergenic | 20.0% |
| !! | CAATTTAATGTTGTTCTTAA+TGG | + | chr8_4:25545031-25545050 | Msa1320750:CDS | 20.0% |
| !! | GGTAATTTAATTGTAGTTAT+TGG | + | chr8_4:25545150-25545169 | Msa1320750:intron | 20.0% |
| !! | AATAAAAATAACCATTAAGC+AGG | - | chr8_4:25545255-25545274 | None:intergenic | 20.0% |
| !!! | TCACATTGATAACAAATTTT+AGG | - | chr8_4:25545333-25545352 | None:intergenic | 20.0% |
| !! | TGAATAGAAATTAAGAATTC+AGG | - | chr8_4:25545460-25545479 | None:intergenic | 20.0% |
| !! | AGATATATCTATTTCCATAT+AGG | + | chr8_4:25545582-25545601 | Msa1320750:intron | 20.0% |
| !! | GATATATCTATTTCCATATA+GGG | + | chr8_4:25545583-25545602 | Msa1320750:intron | 20.0% |
| !! | ATATATCTATTTCCATATAG+GGG | + | chr8_4:25545584-25545603 | Msa1320750:intron | 20.0% |
| !! | AGTATTAAGTAAATTCTGAA+TGG | + | chr8_4:25545618-25545637 | Msa1320750:intron | 20.0% |
| !!! | GATAACAGATTTTAACAAAT+AGG | - | chr8_4:25545680-25545699 | None:intergenic | 20.0% |
| !!! | TAATTATCCTCTAAAATTTC+AGG | + | chr8_4:25545836-25545855 | Msa1320750:intron | 20.0% |
| !!! | AATTATCCTCTAAAATTTCA+GGG | + | chr8_4:25545837-25545856 | Msa1320750:intron | 20.0% |
| !!! | TATATATTATTGACTTGTTC+AGG | + | chr8_4:25545933-25545952 | Msa1320750:intron | 20.0% |
| !! | TATTGCAATTAAAATCATGT+GGG | - | chr8_4:25546083-25546102 | None:intergenic | 20.0% |
| !! | ATATTGCAATTAAAATCATG+TGG | - | chr8_4:25546084-25546103 | None:intergenic | 20.0% |
| !!! | AGTTCATACATAGAAATTTT+AGG | + | chr8_4:25546354-25546373 | Msa1320750:intron | 20.0% |
| !! | CATTATAAAGATTACATTCA+AGG | - | chr8_4:25546403-25546422 | None:intergenic | 20.0% |
| !!! | CTACTATTTTCTAAGTTATT+TGG | + | chr8_4:25546680-25546699 | Msa1320750:CDS | 20.0% |
| !! | AAAATATTTGATCACGTATT+TGG | + | chr8_4:25546821-25546840 | Msa1320750:CDS | 20.0% |
| !! | AAATATTTGATCACGTATTT+GGG | + | chr8_4:25546822-25546841 | Msa1320750:CDS | 20.0% |
| !!! | ATTTTTCACAAAAAGAGAAA+AGG | + | chr8_4:25547087-25547106 | Msa1320750:CDS | 20.0% |
| !! | GATACATCAAAAGAAATAAA+AGG | - | chr8_4:25547187-25547206 | None:intergenic | 20.0% |
| !! | TACATGTAAGAATTTACTTT+CGG | + | chr8_4:25547654-25547673 | Msa1320750:intron | 20.0% |
| !! | ATCTTATGTTATCAAATAGT+TGG | + | chr8_4:25547979-25547998 | Msa1320750:intron | 20.0% |
| !! | ATAACAGGTTTATTATTTCA+AGG | - | chr8_4:25548074-25548093 | None:intergenic | 20.0% |
| !!! | GAAAATTCTAAGAATATGTT+TGG | - | chr8_4:25548300-25548319 | None:intergenic | 20.0% |
| !!! | TTGCATTCTAATTTTGTATT+TGG | + | chr8_4:25549530-25549549 | Msa1320750:three_prime_UTR | 20.0% |
| ! | AAATTTATGAGAGAGAAAGA+GGG | - | chr8_4:25543227-25543246 | None:intergenic | 25.0% |
| ! | AAAATTTATGAGAGAGAAAG+AGG | - | chr8_4:25543228-25543247 | None:intergenic | 25.0% |
| !!! | CATGTTTTTAATGTCGTTTT+GGG | + | chr8_4:25543369-25543388 | Msa1320750:intron | 25.0% |
| !!! | TTTAAGGTGTTGTTTTAGTA+AGG | + | chr8_4:25543930-25543949 | Msa1320750:intron | 25.0% |
| ! | TTCACAATAATTGTGTGTTT+AGG | + | chr8_4:25543966-25543985 | Msa1320750:intron | 25.0% |
| !!! | TTGACTTTACTTGCTTTTTT+TGG | + | chr8_4:25544016-25544035 | Msa1320750:intron | 25.0% |
| !!! | TACTTGCTTTTTTTGGTAAT+TGG | + | chr8_4:25544023-25544042 | Msa1320750:intron | 25.0% |
| !! | TAAGGTATTTAGTACATGTT+TGG | + | chr8_4:25544064-25544083 | Msa1320750:intron | 25.0% |
| ! | TATTAACCCTGTTATTATTG+GGG | + | chr8_4:25544190-25544209 | Msa1320750:intron | 25.0% |
| !!! | CAATGTTTTAATAACTGAAC+CGG | + | chr8_4:25544221-25544240 | Msa1320750:intron | 25.0% |
| ! | CACATACATCATTTATTGAA+TGG | - | chr8_4:25544457-25544476 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr8_4:25544455-25544474 | Msa1320750:intron | 25.0% |
| ! | CATTGAATAAATGATGTACA+TGG | - | chr8_4:25544504-25544523 | None:intergenic | 25.0% |
| !!! | TGCAGTCTTTTAATTTATTC+TGG | - | chr8_4:25544641-25544660 | None:intergenic | 25.0% |
| ! | ATATTAACTTACTTTAGCCT+TGG | - | chr8_4:25544845-25544864 | None:intergenic | 25.0% |
| ! | TAGATAATTGATCTTCTGAT+TGG | + | chr8_4:25545733-25545752 | Msa1320750:intron | 25.0% |
| ! | AGATAATTGATCTTCTGATT+GGG | + | chr8_4:25545734-25545753 | Msa1320750:intron | 25.0% |
| !!! | ATTATCCTCTAAAATTTCAG+GGG | + | chr8_4:25545838-25545857 | Msa1320750:intron | 25.0% |
| ! | AAACTGTGACAACAAATATA+AGG | - | chr8_4:25546633-25546652 | None:intergenic | 25.0% |
| ! | ATAATTGAAGCTGTTTACTT+AGG | + | chr8_4:25547763-25547782 | Msa1320750:intron | 25.0% |
| ! | TAATTGAAGCTGTTTACTTA+GGG | + | chr8_4:25547764-25547783 | Msa1320750:intron | 25.0% |
| ! | CTAAAATCAAAAAGAGAATG+AGG | - | chr8_4:25547943-25547962 | None:intergenic | 25.0% |
| !! | CATTTGTTAGAATCAATAAC+AGG | - | chr8_4:25548089-25548108 | None:intergenic | 25.0% |
| !!! | CTGTTATTGATTCTAACAAA+TGG | + | chr8_4:25548087-25548106 | Msa1320750:intron | 25.0% |
| ! | AACAGAATAAGAAAAGAATG+TGG | - | chr8_4:25548234-25548253 | None:intergenic | 25.0% |
| !!! | AGAATATGTTTGGTGTTTTA+AGG | - | chr8_4:25548290-25548309 | None:intergenic | 25.0% |
| !!! | CAAACATAACATGATTTGTT+AGG | - | chr8_4:25548565-25548584 | None:intergenic | 25.0% |
| !!! | TACATTGACTTTAAAGTACT+AGG | - | chr8_4:25548618-25548637 | None:intergenic | 25.0% |
| ! | AACGGGAAAAAATAAACATT+AGG | - | chr8_4:25549106-25549125 | None:intergenic | 25.0% |
| ! | AAGATAACAATTCAGAACAA+CGG | - | chr8_4:25549124-25549143 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTATCTTTTCT+TGG | + | chr8_4:25549128-25549147 | Msa1320750:intron | 25.0% |
| !! | TCTAATTTTGTATTTGGTAG+AGG | + | chr8_4:25549536-25549555 | Msa1320750:three_prime_UTR | 25.0% |
| ! | AACTTCTGTTAACTAATATC+AGG | - | chr8_4:25549733-25549752 | None:intergenic | 25.0% |
| !! | TTAACAGAAGTTTTGCAAAT+TGG | + | chr8_4:25549741-25549760 | Msa1320750:three_prime_UTR | 25.0% |
| !! | GCATGTTTTTAATGTCGTTT+TGG | + | chr8_4:25543368-25543387 | Msa1320750:intron | 30.0% |
| !! | ACTTTATGGGTTTTGTCAAA+TGG | + | chr8_4:25543619-25543638 | Msa1320750:intron | 30.0% |
| !! | CTTTATGGGTTTTGTCAAAT+GGG | + | chr8_4:25543620-25543639 | Msa1320750:intron | 30.0% |
| !!! | TTTAATTGGGGAGAGTTTTT+TGG | + | chr8_4:25543899-25543918 | Msa1320750:intron | 30.0% |
| !! | TGTGTTTAGGTTGAAATGTT+TGG | + | chr8_4:25543979-25543998 | Msa1320750:intron | 30.0% |
| !! | GTGTTTAGGTTGAAATGTTT+GGG | + | chr8_4:25543980-25543999 | Msa1320750:intron | 30.0% |
| !!! | CTTTTTTTGGTAATTGGTGT+TGG | + | chr8_4:25544029-25544048 | Msa1320750:intron | 30.0% |
| ATTTAGTACATGTTTGGTTG+TGG | + | chr8_4:25544070-25544089 | Msa1320750:intron | 30.0% | |
| ATTAACCCTGTTATTATTGG+GGG | + | chr8_4:25544191-25544210 | Msa1320750:intron | 30.0% | |
| CGGTTCAGTTATTAAAACAT+TGG | - | chr8_4:25544223-25544242 | None:intergenic | 30.0% | |
| ATGGTTCAACAACTTTAACT+CGG | + | chr8_4:25544268-25544287 | Msa1320750:intron | 30.0% | |
| CAATGATTTAAAAACCAACC+CGG | - | chr8_4:25544379-25544398 | None:intergenic | 30.0% | |
| ATGATGTACATGGTCTATAT+TGG | - | chr8_4:25544494-25544513 | None:intergenic | 30.0% | |
| AATGTAATAAAGCACATCCA+TGG | - | chr8_4:25544720-25544739 | None:intergenic | 30.0% | |
| ! | GACATTCTAGTTACTTGTAT+AGG | + | chr8_4:25544871-25544890 | Msa1320750:intron | 30.0% |
| !!! | GGGATGCTGTTTTAAAATTT+AGG | + | chr8_4:25544939-25544958 | Msa1320750:CDS | 30.0% |
| ACAATTAAATTACCTGACCA+AGG | - | chr8_4:25545144-25545163 | None:intergenic | 30.0% | |
| !! | AATTGTAGTTATTGGCTTCT+TGG | + | chr8_4:25545158-25545177 | Msa1320750:intron | 30.0% |
| TAGATAATCAATCTTCCAAG+TGG | + | chr8_4:25545379-25545398 | Msa1320750:intron | 30.0% | |
| AGATAATCAATCTTCCAAGT+GGG | + | chr8_4:25545380-25545399 | Msa1320750:intron | 30.0% | |
| !! | ACATATTTTTGATTCCCACT+TGG | - | chr8_4:25545397-25545416 | None:intergenic | 30.0% |
| ! | GTGTGTAGTTATTGTTTTCA+TGG | + | chr8_4:25545557-25545576 | Msa1320750:intron | 30.0% |
| ATAGAAACAGTATGAAGAAG+AGG | - | chr8_4:25545866-25545885 | None:intergenic | 30.0% | |
| AAAAGTCATTCAGTGCATAA+AGG | - | chr8_4:25546302-25546321 | None:intergenic | 30.0% | |
| CATAGAACATATGATGCAAT+AGG | + | chr8_4:25546326-25546345 | Msa1320750:intron | 30.0% | |
| !! | TAGAAATTTTAGGCATTGCA+TGG | + | chr8_4:25546364-25546383 | Msa1320750:intron | 30.0% |
| ACATTCAAGGAAAATCCAAA+TGG | - | chr8_4:25546390-25546409 | None:intergenic | 30.0% | |
| ! | AATGCCTTGTTATATCTTTG+TGG | + | chr8_4:25546419-25546438 | Msa1320750:intron | 30.0% |
| TGATCCACAAAGATATAACA+AGG | - | chr8_4:25546426-25546445 | None:intergenic | 30.0% | |
| ATATAACTAATGAGTGCCTT+CGG | - | chr8_4:25546486-25546505 | None:intergenic | 30.0% | |
| ACCTAAACCTATATACATCA+AGG | + | chr8_4:25546898-25546917 | Msa1320750:CDS | 30.0% | |
| TCCTTGATGTATATAGGTTT+AGG | - | chr8_4:25546902-25546921 | None:intergenic | 30.0% | |
| GATGAATTGGATAAACAGAA+TGG | + | chr8_4:25546932-25546951 | Msa1320750:CDS | 30.0% | |
| TTCACAAAAAGAGAAAAGGT+TGG | + | chr8_4:25547091-25547110 | Msa1320750:intron | 30.0% | |
| AATAATCATATATCTCCGTC+TGG | + | chr8_4:25547147-25547166 | Msa1320750:intron | 30.0% | |
| GCTTCAAAAAGACTATGTAA+AGG | - | chr8_4:25547313-25547332 | None:intergenic | 30.0% | |
| !!! | CATAGTCTTTTTGAAGCTAA+AGG | + | chr8_4:25547316-25547335 | Msa1320750:CDS | 30.0% |
| ATGCAAAACAGATAAGTTAG+AGG | - | chr8_4:25547468-25547487 | None:intergenic | 30.0% | |
| ! | CTAACTTATCTGTTTTGCAT+TGG | + | chr8_4:25547468-25547487 | Msa1320750:intron | 30.0% |
| GTTTCAAACAATATACCTTG+AGG | + | chr8_4:25547552-25547571 | Msa1320750:intron | 30.0% | |
| !!! | TAGAGACCAACAAACTTTTT+TGG | + | chr8_4:25547589-25547608 | Msa1320750:intron | 30.0% |
| TTATAGGCAATTTAAGTAGC+TGG | + | chr8_4:25547802-25547821 | Msa1320750:intron | 30.0% | |
| !! | AAGTTACTTTGAAATTCCCA+TGG | + | chr8_4:25548181-25548200 | Msa1320750:intron | 30.0% |
| ! | CATATTCTTAGAATTTTCCC+TGG | + | chr8_4:25548302-25548321 | Msa1320750:intron | 30.0% |
| TTAGAACAGAATTCATTCCA+GGG | - | chr8_4:25548322-25548341 | None:intergenic | 30.0% | |
| ATCATGTTATGTTTGTTCTG+AGG | + | chr8_4:25548570-25548589 | Msa1320750:CDS | 30.0% | |
| ! | TTTAAAGTACTAGGTGAGAA+AGG | - | chr8_4:25548609-25548628 | None:intergenic | 30.0% |
| GTGTTTATTTCAAGCAATAC+AGG | - | chr8_4:25548688-25548707 | None:intergenic | 30.0% | |
| ! | TTTGAAGCATTCATAACAAG+TGG | - | chr8_4:25548775-25548794 | None:intergenic | 30.0% |
| TTATAATGCCAACCTTGAAA+AGG | + | chr8_4:25548840-25548859 | Msa1320750:CDS | 30.0% | |
| ! | ACAAGAAACATACCTTTTCA+AGG | - | chr8_4:25548855-25548874 | None:intergenic | 30.0% |
| CCTGAACAGAATAGTTAAAA+TGG | - | chr8_4:25548913-25548932 | None:intergenic | 30.0% | |
| !!! | CCATTTTAACTATTCTGTTC+AGG | + | chr8_4:25548910-25548929 | Msa1320750:intron | 30.0% |
| CCATAATTCAAGATGCAAAA+GGG | - | chr8_4:25549060-25549079 | None:intergenic | 30.0% | |
| ACCATAATTCAAGATGCAAA+AGG | - | chr8_4:25549061-25549080 | None:intergenic | 30.0% | |
| AGATAACAATTCAGAACAAC+GGG | - | chr8_4:25549123-25549142 | None:intergenic | 30.0% | |
| GAAGACAAATCTGTTAGTAA+CGG | + | chr8_4:25549245-25549264 | Msa1320750:CDS | 30.0% | |
| ! | GAATTTTCTACTGCTGTTAT+TGG | - | chr8_4:25549290-25549309 | None:intergenic | 30.0% |
| ! | TCTGAAAATGATGATGATGT+TGG | + | chr8_4:25549308-25549327 | Msa1320750:CDS | 30.0% |
| TGATGTTGGTATAATTTCTC+CGG | + | chr8_4:25549322-25549341 | Msa1320750:CDS | 30.0% | |
| TTCGAATTATCAGAATCATC+AGG | - | chr8_4:25549365-25549384 | None:intergenic | 30.0% | |
| ! | TTTTGTATTTGGTAGAGGTT+TGG | + | chr8_4:25549541-25549560 | Msa1320750:three_prime_UTR | 30.0% |
| GAAGAAGCCATTGAAATTGA+GGG | - | chr8_4:25543290-25543309 | None:intergenic | 35.0% | |
| ! | TTAGGGTTTTCTTCTGTACT+TGG | + | chr8_4:25543568-25543587 | Msa1320750:intron | 35.0% |
| ! | TAGGGTTTTCTTCTGTACTT+GGG | + | chr8_4:25543569-25543588 | Msa1320750:intron | 35.0% |
| CAAACTGAAACGCGAAATTA+TGG | - | chr8_4:25543651-25543670 | None:intergenic | 35.0% | |
| CATAATTTCGCGTTTCAGTT+TGG | + | chr8_4:25543649-25543668 | Msa1320750:intron | 35.0% | |
| !! | TTCCCTTTTGATCTGATTTG+CGG | + | chr8_4:25543842-25543861 | Msa1320750:intron | 35.0% |
| AACCGCAAATCAGATCAAAA+GGG | - | chr8_4:25543847-25543866 | None:intergenic | 35.0% | |
| TAACCGCAAATCAGATCAAA+AGG | - | chr8_4:25543848-25543867 | None:intergenic | 35.0% | |
| ! | ATTAAGGGTAGTTTGTAGTG+TGG | + | chr8_4:25544139-25544158 | Msa1320750:intron | 35.0% |
| ACTAACCCCCAATAATAACA+GGG | - | chr8_4:25544199-25544218 | None:intergenic | 35.0% | |
| TACTAACCCCCAATAATAAC+AGG | - | chr8_4:25544200-25544219 | None:intergenic | 35.0% | |
| TTATTTGAACAGTTCAACCG+TGG | - | chr8_4:25544310-25544329 | None:intergenic | 35.0% | |
| TCAAATAACCAAACCGTAGA+CGG | + | chr8_4:25544322-25544341 | Msa1320750:intron | 35.0% | |
| !!! | CGGGTTGGTTTTTAAATCAT+TGG | + | chr8_4:25544377-25544396 | Msa1320750:intron | 35.0% |
| TTGCTTATAATAGTGACCAG+AGG | + | chr8_4:25544542-25544561 | Msa1320750:intron | 35.0% | |
| TGCTTATAATAGTGACCAGA+GGG | + | chr8_4:25544543-25544562 | Msa1320750:intron | 35.0% | |
| !!! | ATCTATGTGGTTTTAAGCCA+TGG | + | chr8_4:25544700-25544719 | Msa1320750:intron | 35.0% |
| GAAACAAAAACTGTCTGTTC+AGG | - | chr8_4:25544801-25544820 | None:intergenic | 35.0% | |
| TTGTTTCGACAATCTCATGT+TGG | + | chr8_4:25544814-25544833 | Msa1320750:CDS | 35.0% | |
| TGTTTCGACAATCTCATGTT+GGG | + | chr8_4:25544815-25544834 | Msa1320750:CDS | 35.0% | |
| CAAAGATCCTGATTTCAATG+TGG | + | chr8_4:25544997-25545016 | Msa1320750:CDS | 35.0% | |
| AAGAAGTCCACATTGAAATC+AGG | - | chr8_4:25545007-25545026 | None:intergenic | 35.0% | |
| ! | TAATGTTGTTCTTAATGGGC+TGG | + | chr8_4:25545036-25545055 | Msa1320750:CDS | 35.0% |
| GATGTTCCTTTAGTTGAAAG+TGG | + | chr8_4:25545106-25545125 | Msa1320750:CDS | 35.0% | |
| GTAGTTCCACTTTCAACTAA+AGG | - | chr8_4:25545115-25545134 | None:intergenic | 35.0% | |
| TTAGTTGAAAGTGGAACTAC+TGG | + | chr8_4:25545115-25545134 | Msa1320750:CDS | 35.0% | |
| TAGTTGAAAGTGGAACTACT+GGG | + | chr8_4:25545116-25545135 | Msa1320750:CDS | 35.0% | |
| !!! | TCGTGTTTTTTCCTGCTTAA+TGG | + | chr8_4:25545241-25545260 | Msa1320750:intron | 35.0% |
| GAAGACATGAAGTATGTCAA+AGG | - | chr8_4:25545776-25545795 | None:intergenic | 35.0% | |
| GAATTAGAGATTAAGAGCTC+AGG | - | chr8_4:25545814-25545833 | None:intergenic | 35.0% | |
| !!! | TTTTTCACCTCCTAGTTTTG+TGG | + | chr8_4:25545981-25546000 | Msa1320750:intron | 35.0% |
| AACCAACACATACCTTTGAT+GGG | - | chr8_4:25546277-25546296 | None:intergenic | 35.0% | |
| AAACCAACACATACCTTTGA+TGG | - | chr8_4:25546278-25546297 | None:intergenic | 35.0% | |
| ! | AGTTTGTTCACTGTATTGTG+TGG | + | chr8_4:25546648-25546667 | Msa1320750:intron | 35.0% |
| GTTTGTTCACTGTATTGTGT+GGG | + | chr8_4:25546649-25546668 | Msa1320750:intron | 35.0% | |
| !!! | CTCTATGTTTTTTGATGAGC+TGG | - | chr8_4:25546753-25546772 | None:intergenic | 35.0% |
| CAGCTCATCAAAAAACATAG+AGG | + | chr8_4:25546751-25546770 | Msa1320750:CDS | 35.0% | |
| CATAGCAAAGATGAAGACAT+CGG | + | chr8_4:25546785-25546804 | Msa1320750:CDS | 35.0% | |
| !! | TGAATTAGCTTTGTCCAATG+AGG | + | chr8_4:25546853-25546872 | Msa1320750:CDS | 35.0% |
| ! | ATTTTTCCATGTCTCCTCAT+TGG | - | chr8_4:25546870-25546889 | None:intergenic | 35.0% |
| AGGACATCCTTGATGTATAT+AGG | - | chr8_4:25546908-25546927 | None:intergenic | 35.0% | |
| GTTTATCCAATTCATCAGAC+AGG | - | chr8_4:25546928-25546947 | None:intergenic | 35.0% | |
| GGATAAACAGAATGGAAATC+TGG | + | chr8_4:25546940-25546959 | Msa1320750:CDS | 35.0% | |
| ! | CTGGATAATGATAATGCTTG+TGG | + | chr8_4:25546959-25546978 | Msa1320750:CDS | 35.0% |
| CTTTGATAAAGATGACCAGT+TGG | + | chr8_4:25547234-25547253 | Msa1320750:CDS | 35.0% | |
| TAACAAATTCTACAGCCAAC+TGG | - | chr8_4:25547252-25547271 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTAAAGGAATTGC+TGG | + | chr8_4:25547325-25547344 | Msa1320750:CDS | 35.0% |
| ACAACAAATGCTGTTATTGC+TGG | + | chr8_4:25547370-25547389 | Msa1320750:CDS | 35.0% | |
| GATTGTCATTGAAGCAATCA+AGG | + | chr8_4:25547396-25547415 | Msa1320750:CDS | 35.0% | |
| AACAGATAAGTTAGAGGAAG+CGG | - | chr8_4:25547462-25547481 | None:intergenic | 35.0% | |
| ! | TGACTGTGTTACTGTATGTT+TGG | + | chr8_4:25547508-25547527 | Msa1320750:intron | 35.0% |
| ! | GACTGTGTTACTGTATGTTT+GGG | + | chr8_4:25547509-25547528 | Msa1320750:intron | 35.0% |
| ! | ACTGTGTTACTGTATGTTTG+GGG | + | chr8_4:25547510-25547529 | Msa1320750:intron | 35.0% |
| !!! | AGAAGGTAGTTTTTTCCTCA+AGG | - | chr8_4:25547570-25547589 | None:intergenic | 35.0% |
| !! | AAAGTTTGTTGGTCTCTAGA+AGG | - | chr8_4:25547587-25547606 | None:intergenic | 35.0% |
| !!! | AGACCAACAAACTTTTTTGG+TGG | + | chr8_4:25547592-25547611 | Msa1320750:intron | 35.0% |
| !!! | CAACAAACTTTTTTGGTGGT+GGG | + | chr8_4:25547596-25547615 | Msa1320750:intron | 35.0% |
| !!! | AACAAACTTTTTTGGTGGTG+GGG | + | chr8_4:25547597-25547616 | Msa1320750:intron | 35.0% |
| GCTGTTTACTTAGGGTTATT+TGG | + | chr8_4:25547772-25547791 | Msa1320750:intron | 35.0% | |
| GCTTATGATAATAAGCCATC+TGG | - | chr8_4:25547894-25547913 | None:intergenic | 35.0% | |
| GGAATGCAGTATTCTGTATT+TGG | + | chr8_4:25548036-25548055 | Msa1320750:intron | 35.0% | |
| ! | AGGGATATCATGTTTTTCCA+TGG | + | chr8_4:25548152-25548171 | Msa1320750:intron | 35.0% |
| ! | GGGATATCATGTTTTTCCAT+GGG | + | chr8_4:25548153-25548172 | Msa1320750:intron | 35.0% |
| CTTAGAACAGAATTCATTCC+AGG | - | chr8_4:25548323-25548342 | None:intergenic | 35.0% | |
| !! | CATGATTTGTTAGGCTCAAA+TGG | - | chr8_4:25548556-25548575 | None:intergenic | 35.0% |
| CAACATCCTTCAACTTTGAA+CGG | - | chr8_4:25548714-25548733 | None:intergenic | 35.0% | |
| TGTTGTCGAAAAGATCATCA+AGG | + | chr8_4:25548729-25548748 | Msa1320750:CDS | 35.0% | |
| AAGCATTCATAACAAGTGGA+AGG | - | chr8_4:25548771-25548790 | None:intergenic | 35.0% | |
| !! | GAAACATACCTTTTCAAGGT+TGG | - | chr8_4:25548851-25548870 | None:intergenic | 35.0% |
| ! | TACAGTAGAGGATTTTCAAC+AGG | + | chr8_4:25548976-25548995 | Msa1320750:CDS | 35.0% |
| GCAACATTAACATAAAGCAC+AGG | + | chr8_4:25549008-25549027 | Msa1320750:CDS | 35.0% | |
| TCAAGATGCAAAAGGGAAAT+GGG | - | chr8_4:25549053-25549072 | None:intergenic | 35.0% | |
| TTCAAGATGCAAAAGGGAAA+TGG | - | chr8_4:25549054-25549073 | None:intergenic | 35.0% | |
| ! | CCCTTTTGCATCTTGAATTA+TGG | + | chr8_4:25549057-25549076 | Msa1320750:intron | 35.0% |
| TGGTGACTTTAAATTCAGAG+AGG | + | chr8_4:25549148-25549167 | Msa1320750:intron | 35.0% | |
| TTGTGCACGAACTATTAATC+CGG | + | chr8_4:25549499-25549518 | Msa1320750:three_prime_UTR | 35.0% | |
| TTAGAATGCAAGTTCTCAAC+CGG | - | chr8_4:25549521-25549540 | None:intergenic | 35.0% | |
| !!! | CTGCTACTAGTTTTCTGATT+CGG | + | chr8_4:25549594-25549613 | Msa1320750:three_prime_UTR | 35.0% |
| AGCACAAGGAAGAACAAAAA+AGG | - | chr8_4:25549630-25549649 | None:intergenic | 35.0% | |
| GTTGAGTGAGAAGAAGTTGA+AGG | - | chr8_4:25543268-25543287 | None:intergenic | 40.0% | |
| CACTCAACCCTCAATTTCAA+TGG | + | chr8_4:25543280-25543299 | Msa1320750:exon | 40.0% | |
| GGAAGAAGCCATTGAAATTG+AGG | - | chr8_4:25543291-25543310 | None:intergenic | 40.0% | |
| !!! | GTCGTTTTGGGTTTTCTTTC+AGG | + | chr8_4:25543381-25543400 | Msa1320750:intron | 40.0% |
| TCAGGATGCAAAAGTTCTCA+TGG | + | chr8_4:25543399-25543418 | Msa1320750:intron | 40.0% | |
| GATGCAAAAGTTCTCATGGT+TGG | + | chr8_4:25543403-25543422 | Msa1320750:CDS | 40.0% | |
| ! | AGGGTTTTCTTCTGTACTTG+GGG | + | chr8_4:25543570-25543589 | Msa1320750:intron | 40.0% |
| !!! | TGGGGAGAGTTTTTTGGTAT+TGG | + | chr8_4:25543905-25543924 | Msa1320750:intron | 40.0% |
| !! | GTAATTGGTGTTGGCAATGA+TGG | + | chr8_4:25544038-25544057 | Msa1320750:intron | 40.0% |
| ! | TGTTGGCAATGATGGAGATA+AGG | + | chr8_4:25544046-25544065 | Msa1320750:intron | 40.0% |
| GTTGTTGAACCATGAACCAA+AGG | - | chr8_4:25544261-25544280 | None:intergenic | 40.0% | |
| AACTTTAACTCGGTTGAACC+TGG | + | chr8_4:25544278-25544297 | Msa1320750:intron | 40.0% | |
| GGATAATACTTTACACCCTC+TGG | + | chr8_4:25544398-25544417 | Msa1320750:intron | 40.0% | |
| TGCTTATAACAGTGACCAGA+GGG | - | chr8_4:25544416-25544435 | None:intergenic | 40.0% | |
| TTGCTTATAACAGTGACCAG+AGG | - | chr8_4:25544417-25544436 | None:intergenic | 40.0% | |
| GTGATAAGGTGTAGGTGATA+AGG | + | chr8_4:25544571-25544590 | Msa1320750:intron | 40.0% | |
| TCTCAATGTGCAGATTGACA+TGG | + | chr8_4:25544756-25544775 | Msa1320750:intron | 40.0% | |
| TGGTTGAGGACTTAATCAGA+TGG | - | chr8_4:25544911-25544930 | None:intergenic | 40.0% | |
| ATCTGATTAAGTCCTCAACC+AGG | + | chr8_4:25544910-25544929 | Msa1320750:intron | 40.0% | |
| ACATGTGAATCGTTTGTGCT+TGG | + | chr8_4:25545078-25545097 | Msa1320750:CDS | 40.0% | |
| TGCTAAACACAACCCCTATA+TGG | - | chr8_4:25545599-25545618 | None:intergenic | 40.0% | |
| CAGGTTACAGTTCATGTCAA+AGG | + | chr8_4:25546179-25546198 | Msa1320750:intron | 40.0% | |
| !! | TATGTCTTTGGAGCTGGTTT+AGG | - | chr8_4:25546230-25546249 | None:intergenic | 40.0% |
| GTACAGACTGGATATGTCTT+TGG | - | chr8_4:25546242-25546261 | None:intergenic | 40.0% | |
| GTACTTGTGATAGTACAGAC+TGG | - | chr8_4:25546254-25546273 | None:intergenic | 40.0% | |
| TATCACAAGTACCCCATCAA+AGG | + | chr8_4:25546262-25546281 | Msa1320750:CDS | 40.0% | |
| ACCAACACATACCTTTGATG+GGG | - | chr8_4:25546276-25546295 | None:intergenic | 40.0% | |
| GATGAAGACATCGGTCAATA+TGG | + | chr8_4:25546794-25546813 | Msa1320750:CDS | 40.0% | |
| ! | AATGATAATGCTTGTGGCGA+TGG | + | chr8_4:25546965-25546984 | Msa1320750:CDS | 40.0% |
| AGTTTCTGCCATGTCATCTT+TGG | + | chr8_4:25546994-25547013 | Msa1320750:CDS | 40.0% | |
| GTTTCTGCCATGTCATCTTT+GGG | + | chr8_4:25546995-25547014 | Msa1320750:CDS | 40.0% | |
| TAAGACTCCAGATATCTTGC+GGG | - | chr8_4:25547030-25547049 | None:intergenic | 40.0% | |
| CTAAGACTCCAGATATCTTG+CGG | - | chr8_4:25547031-25547050 | None:intergenic | 40.0% | |
| GTCTGATTTCACACTCTGAT+GGG | + | chr8_4:25547113-25547132 | Msa1320750:intron | 40.0% | |
| ATCTCCGTCTGGAAACTTAA+CGG | + | chr8_4:25547158-25547177 | Msa1320750:intron | 40.0% | |
| !! | AACATACGTGCTGCTTCATT+TGG | + | chr8_4:25547283-25547302 | Msa1320750:CDS | 40.0% |
| ACAGATAAGTTAGAGGAAGC+GGG | - | chr8_4:25547461-25547480 | None:intergenic | 40.0% | |
| CCACCACCAAAAAAGTTTGT+TGG | - | chr8_4:25547598-25547617 | None:intergenic | 40.0% | |
| !!! | CCAACAAACTTTTTTGGTGG+TGG | + | chr8_4:25547595-25547614 | Msa1320750:intron | 40.0% |
| TAGGCAATTTAAGTAGCTGG+AGG | + | chr8_4:25547805-25547824 | Msa1320750:intron | 40.0% | |
| AGCTGAAGACAGCTTATATC+AGG | - | chr8_4:25547847-25547866 | None:intergenic | 40.0% | |
| GATTCATAAGCTTCTCCAGA+TGG | + | chr8_4:25547876-25547895 | Msa1320750:intron | 40.0% | |
| ! | TTGGATATGTTTCTGCTGCA+CGG | + | chr8_4:25547998-25548017 | Msa1320750:intron | 40.0% |
| TTTGCTCGCTGTTTATTCCT+AGG | + | chr8_4:25548123-25548142 | Msa1320750:intron | 40.0% | |
| TGTTTATTCCTAGGAGTAGG+AGG | + | chr8_4:25548132-25548151 | Msa1320750:intron | 40.0% | |
| GTTTATTCCTAGGAGTAGGA+GGG | + | chr8_4:25548133-25548152 | Msa1320750:intron | 40.0% | |
| TGTGGTAGATAAAAGCGAGA+TGG | - | chr8_4:25548216-25548235 | None:intergenic | 40.0% | |
| TCGCAGAATGACATATTGTC+TGG | + | chr8_4:25548492-25548511 | Msa1320750:intron | 40.0% | |
| ! | ATAAGCAGAGTGTTTCTTGC+TGG | - | chr8_4:25548523-25548542 | None:intergenic | 40.0% |
| CTAGGTGAGAAAGGAAGATT+TGG | - | chr8_4:25548600-25548619 | None:intergenic | 40.0% | |
| ACTCACCATGTTCGAATATG+TGG | + | chr8_4:25548652-25548671 | Msa1320750:intron | 40.0% | |
| CTCACCATGTTCGAATATGT+GGG | + | chr8_4:25548653-25548672 | Msa1320750:intron | 40.0% | |
| GTTACCCACATATTCGAACA+TGG | - | chr8_4:25548660-25548679 | None:intergenic | 40.0% | |
| CACAAACCGTTCAAAGTTGA+AGG | + | chr8_4:25548705-25548724 | Msa1320750:CDS | 40.0% | |
| AAGATCATCAAGGCTAAGCT+TGG | + | chr8_4:25548739-25548758 | Msa1320750:CDS | 40.0% | |
| AGATCATCAAGGCTAAGCTT+GGG | + | chr8_4:25548740-25548759 | Msa1320750:CDS | 40.0% | |
| CAATATCACCAGCTTCATAG+AGG | - | chr8_4:25548801-25548820 | None:intergenic | 40.0% | |
| CTATGAAGCTGGTGATATTG+AGG | + | chr8_4:25548801-25548820 | Msa1320750:CDS | 40.0% | |
| TGGTGATATTGAGGATGACA+TGG | + | chr8_4:25548810-25548829 | Msa1320750:CDS | 40.0% | |
| TGGTACAATGCTTACAGTAG+AGG | + | chr8_4:25548964-25548983 | Msa1320750:CDS | 40.0% | |
| GATGAAGAGAAAGAACCTGA+TGG | + | chr8_4:25549176-25549195 | Msa1320750:CDS | 40.0% | |
| AGAGAAAGAACCTGATGGTA+TGG | + | chr8_4:25549181-25549200 | Msa1320750:CDS | 40.0% | |
| ! | GGAAGCTTTCTTTTCTTCAC+CGG | - | chr8_4:25549344-25549363 | None:intergenic | 40.0% |
| ATGATCTTGTCATGCTCGAT+GGG | + | chr8_4:25549438-25549457 | Msa1320750:CDS | 40.0% | |
| ATGCTCGATGGGAATTTAGA+TGG | + | chr8_4:25549449-25549468 | Msa1320750:CDS | 40.0% | |
| TGCTCGATGGGAATTTAGAT+GGG | + | chr8_4:25549450-25549469 | Msa1320750:CDS | 40.0% | |
| ! | CTTCCTTGTGCTTTTCTCTT+TGG | + | chr8_4:25549638-25549657 | Msa1320750:three_prime_UTR | 40.0% |
| ! | AAAGTTCTCATGGTTGGTGC+TGG | + | chr8_4:25543409-25543428 | Msa1320750:CDS | 45.0% |
| CTCAAAACTCTTGCTCTCTC+TGG | + | chr8_4:25543451-25543470 | Msa1320750:CDS | 45.0% | |
| ! | AAAGGTCTTGGTTCGATGTC+CGG | - | chr8_4:25544243-25544262 | None:intergenic | 45.0% |
| ! | GAACCAAGACCTTTGGTTCA+TGG | + | chr8_4:25544249-25544268 | Msa1320750:intron | 45.0% |
| GAACCATGAACCAAAGGTCT+TGG | - | chr8_4:25544255-25544274 | None:intergenic | 45.0% | |
| GTTGAACCTGGACAAAACCA+CGG | + | chr8_4:25544290-25544309 | Msa1320750:intron | 45.0% | |
| !! | GTTCAACCGTTTGACTTGTC+CGG | + | chr8_4:25544357-25544376 | Msa1320750:intron | 45.0% |
| !! | TTCAACCGTTTGACTTGTCC+GGG | + | chr8_4:25544358-25544377 | Msa1320750:intron | 45.0% |
| ! | TAATAGTGACCAGAGGGTGT+AGG | + | chr8_4:25544549-25544568 | Msa1320750:intron | 45.0% |
| AGGTGTAGGTGATAAGGTTG+TGG | + | chr8_4:25544577-25544596 | Msa1320750:intron | 45.0% | |
| GGTGTAGGTGATAAGGTTGT+GGG | + | chr8_4:25544578-25544597 | Msa1320750:intron | 45.0% | |
| GTGTAGGTGATAAGGTTGTG+GGG | + | chr8_4:25544579-25544598 | Msa1320750:intron | 45.0% | |
| ! | AGGTGCCCCTGAAATTTTAG+AGG | - | chr8_4:25545846-25545865 | None:intergenic | 45.0% |
| TTTCACAGACATGCTTGCCA+AGG | - | chr8_4:25546024-25546043 | None:intergenic | 45.0% | |
| !! | ACTGGATATGTCTTTGGAGC+TGG | - | chr8_4:25546236-25546255 | None:intergenic | 45.0% |
| ! | ACCCCATCAAAGGTATGTGT+TGG | + | chr8_4:25546272-25546291 | Msa1320750:intron | 45.0% |
| ! | TTAGGCATTGCATGGCCATT+TGG | + | chr8_4:25546372-25546391 | Msa1320750:intron | 45.0% |
| ACAGTCTAACCTATCACCGA+AGG | + | chr8_4:25546467-25546486 | Msa1320750:intron | 45.0% | |
| TAATGAGTGCCTTCGGTGAT+AGG | - | chr8_4:25546479-25546498 | None:intergenic | 45.0% | |
| CTTTGTCCAATGAGGAGACA+TGG | + | chr8_4:25546861-25546880 | Msa1320750:CDS | 45.0% | |
| GGATGTCCTGTCTGATGAAT+TGG | + | chr8_4:25546919-25546938 | Msa1320750:CDS | 45.0% | |
| CTTCATGCCCAAAGATGACA+TGG | - | chr8_4:25547005-25547024 | None:intergenic | 45.0% | |
| TGAAGAACCCGCAAGATATC+TGG | + | chr8_4:25547020-25547039 | Msa1320750:CDS | 45.0% | |
| GGTCTGATTTCACACTCTGA+TGG | + | chr8_4:25547112-25547131 | Msa1320750:intron | 45.0% | |
| TCTCCGTCTGGAAACTTAAC+GGG | + | chr8_4:25547159-25547178 | Msa1320750:intron | 45.0% | |
| GTTCCCGTTAAGTTTCCAGA+CGG | - | chr8_4:25547165-25547184 | None:intergenic | 45.0% | |
| TGGTAACATTGTGCATGCTG+TGG | + | chr8_4:25547345-25547364 | Msa1320750:CDS | 45.0% | |
| ! | TGGATATGTTTCTGCTGCAC+GGG | + | chr8_4:25547999-25548018 | Msa1320750:intron | 45.0% |
| ! | GCACGGGTTGTAGAATTGTT+AGG | + | chr8_4:25548015-25548034 | Msa1320750:intron | 45.0% |
| CGCTGTTTATTCCTAGGAGT+AGG | + | chr8_4:25548129-25548148 | Msa1320750:intron | 45.0% | |
| ATGATATCCCTCCTACTCCT+AGG | - | chr8_4:25548143-25548162 | None:intergenic | 45.0% | |
| ! | ATCATGTTTTTCCATGGGCG+TGG | + | chr8_4:25548158-25548177 | Msa1320750:intron | 45.0% |
| GAGATGGAAGTTACAGCCAT+GGG | - | chr8_4:25548200-25548219 | None:intergenic | 45.0% | |
| CGTCAGAGAGGAAATCATCA+TGG | - | chr8_4:25548405-25548424 | None:intergenic | 45.0% | |
| AAGCTAAGAACTCGTCAGAG+AGG | - | chr8_4:25548417-25548436 | None:intergenic | 45.0% | |
| AAACACTCTGCTTATGCCAG+TGG | + | chr8_4:25548528-25548547 | Msa1320750:CDS | 45.0% | |
| TCAAACCTCCTCTATGAAGC+TGG | + | chr8_4:25548790-25548809 | Msa1320750:CDS | 45.0% | |
| TATCACCAGCTTCATAGAGG+AGG | - | chr8_4:25548798-25548817 | None:intergenic | 45.0% | |
| AGCATTGTACCACCAGTTAC+AGG | - | chr8_4:25548956-25548975 | None:intergenic | 45.0% | |
| ATGGTATGGTACTCTCAGGA+TGG | + | chr8_4:25549195-25549214 | Msa1320750:CDS | 45.0% | |
| ! | CGAATACTGCTGATGACGAA+AGG | + | chr8_4:25549381-25549400 | Msa1320750:CDS | 45.0% |
| GATGATCTTGTCATGCTCGA+TGG | + | chr8_4:25549437-25549456 | Msa1320750:CDS | 45.0% | |
| GTAGAGGTTTGGCGATTCTT+TGG | + | chr8_4:25549552-25549571 | Msa1320750:three_prime_UTR | 45.0% | |
| TTCTTTGGCCATAACCGGTT+AGG | + | chr8_4:25549567-25549586 | Msa1320750:three_prime_UTR | 45.0% | |
| CTAGTAGCAGCATACCTAAC+CGG | - | chr8_4:25549584-25549603 | None:intergenic | 45.0% | |
| ! | CTGCCAAAGAGAAAAGCACA+AGG | - | chr8_4:25549644-25549663 | None:intergenic | 45.0% |
| !! | ATTCTTGCTGACTCTGACAG+AGG | + | chr8_4:25549676-25549695 | Msa1320750:three_prime_UTR | 45.0% |
| !! | AATATATAATATAATTACTA+TGG | - | chr8_4:25545921-25545940 | None:intergenic | 5.0% |
| !! | ATGGTTGGTGCTGGTGGAAT+TGG | + | chr8_4:25543418-25543437 | Msa1320750:CDS | 50.0% |
| GGACATCGAACCAAGACCTT+TGG | + | chr8_4:25544242-25544261 | Msa1320750:intron | 50.0% | |
| !!! | GTTCAACCGTGGTTTTGTCC+AGG | - | chr8_4:25544299-25544318 | None:intergenic | 50.0% |
| ACCAACCCGGACAAGTCAAA+CGG | - | chr8_4:25544366-25544385 | None:intergenic | 50.0% | |
| ! | ACCAGAGGGTGTAGGTGATA+AGG | + | chr8_4:25544557-25544576 | Msa1320750:intron | 50.0% |
| ACCTTATCACCTACACCCTC+TGG | - | chr8_4:25544561-25544580 | None:intergenic | 50.0% | |
| GGGTGTAGGTGATAAGGTGT+AGG | + | chr8_4:25544563-25544582 | Msa1320750:intron | 50.0% | |
| GATGCAGATCTGGTGAATGC+TGG | + | chr8_4:25544603-25544622 | Msa1320750:intron | 50.0% | |
| GTGAATGCTGGTGGAAGTTG+TGG | + | chr8_4:25544615-25544634 | Msa1320750:intron | 50.0% | |
| ATCTCATGTTGGGCAGTCCA+AGG | + | chr8_4:25544825-25544844 | Msa1320750:CDS | 50.0% | |
| AAGTCCTCAACCAGGTTGCT+AGG | + | chr8_4:25544918-25544937 | Msa1320750:intron | 50.0% | |
| AGTCCTCAACCAGGTTGCTA+GGG | + | chr8_4:25544919-25544938 | Msa1320750:intron | 50.0% | |
| AAACAGCATCCCTAGCAACC+TGG | - | chr8_4:25544931-25544950 | None:intergenic | 50.0% | |
| AGTGGAACTACTGGGTTCCT+TGG | + | chr8_4:25545124-25545143 | Msa1320750:CDS | 50.0% | |
| AACTACTGGGTTCCTTGGTC+AGG | + | chr8_4:25545129-25545148 | Msa1320750:CDS | 50.0% | |
| !!! | ACCTCCTAGTTTTGTGGTCC+CGG | + | chr8_4:25545987-25546006 | Msa1320750:intron | 50.0% |
| CAAAGTAACTTCCACGCCCA+TGG | - | chr8_4:25548172-25548191 | None:intergenic | 50.0% | |
| CGAGATGGAAGTTACAGCCA+TGG | - | chr8_4:25548201-25548220 | None:intergenic | 50.0% | |
| TTAGGCTCAAATGGCTCCAC+TGG | - | chr8_4:25548547-25548566 | None:intergenic | 50.0% | |
| GAGCTTCCTTCTCCTGTAAC+TGG | + | chr8_4:25548941-25548960 | Msa1320750:CDS | 50.0% | |
| CTTCCTTCTCCTGTAACTGG+TGG | + | chr8_4:25548944-25548963 | Msa1320750:CDS | 50.0% | |
| GTACCACCAGTTACAGGAGA+AGG | - | chr8_4:25548950-25548969 | None:intergenic | 50.0% | |
| !! | CCTGAGAGTACCATACCATC+AGG | - | chr8_4:25549194-25549213 | None:intergenic | 50.0% |
| CCTGATGGTATGGTACTCTC+AGG | + | chr8_4:25549191-25549210 | Msa1320750:CDS | 50.0% | |
| ! | TCATTTTCTGCTGCTGCGAC+TGG | - | chr8_4:25549227-25549246 | None:intergenic | 50.0% |
| TGCTGTTATTGGTGCGTCTG+AGG | - | chr8_4:25549279-25549298 | None:intergenic | 50.0% | |
| GGCGATTCTTTGGCCATAAC+CGG | + | chr8_4:25549562-25549581 | Msa1320750:three_prime_UTR | 50.0% | |
| GCAGCATACCTAACCGGTTA+TGG | - | chr8_4:25549578-25549597 | None:intergenic | 50.0% | |
| !! | GTTCTCATGGTTGGTGCTGG+TGG | + | chr8_4:25543412-25543431 | Msa1320750:CDS | 55.0% |
| AACCAAACCGTAGACGGTGC+TGG | + | chr8_4:25544328-25544347 | Msa1320750:intron | 55.0% | |
| AACCAGCACCGTCTACGGTT+TGG | - | chr8_4:25544333-25544352 | None:intergenic | 55.0% | |
| !! | ACCGTTTGACTTGTCCGGGT+TGG | + | chr8_4:25544362-25544381 | Msa1320750:intron | 55.0% |
| GTTGTGGGGAGATGCAGATC+TGG | + | chr8_4:25544593-25544612 | Msa1320750:intron | 55.0% | |
| GCAGATCTGGTGAATGCTGG+TGG | + | chr8_4:25544606-25544625 | Msa1320750:intron | 55.0% | |
| CATCCCTAGCAACCTGGTTG+AGG | - | chr8_4:25544925-25544944 | None:intergenic | 55.0% | |
| GGCTGGACAACCTAGATGCA+CGG | + | chr8_4:25545053-25545072 | Msa1320750:CDS | 55.0% | |
| TCACATGTCGCCGTGCATCT+AGG | - | chr8_4:25545066-25545085 | None:intergenic | 55.0% | |
| !!! | TCCTAGTTTTGTGGTCCCGG+CGG | + | chr8_4:25545990-25546009 | Msa1320750:intron | 55.0% |
| CAGGAGAAGGAAGCTCAGCT+AGG | - | chr8_4:25548937-25548956 | None:intergenic | 55.0% | |
| GCCGGGACCACAAAACTAGG+AGG | - | chr8_4:25545991-25546010 | None:intergenic | 60.0% | |
| ACCGCCGGGACCACAAAACT+AGG | - | chr8_4:25545994-25546013 | None:intergenic | 60.0% | |
| TGCCAAGGTGAGTAGACCGC+CGG | - | chr8_4:25546009-25546028 | None:intergenic | 60.0% | |
| CCGCGAACCAGCACCGTCTA+CGG | - | chr8_4:25544338-25544357 | None:intergenic | 65.0% | |
| !! | CCGTAGACGGTGCTGGTTCG+CGG | + | chr8_4:25544335-25544354 | Msa1320750:intron | 65.0% |
| TCCCGGCGGTCTACTCACCT+TGG | + | chr8_4:25546004-25546023 | Msa1320750:intron | 65.0% | |
| GCCAAGGTGAGTAGACCGCC+GGG | - | chr8_4:25546008-25546027 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 25543216 | 25549839 | 25543216 | ID=Msa1320750;Name=Msa1320750 |
| chr8_4 | mRNA | 25543216 | 25549839 | 25543216 | ID=Msa1320750-mRNA-1;Parent=Msa1320750;Name=Msa1320750-mRNA-1;_AED=0.12;_eAED=0.12;_QI=83|1|1|1|1|1|11|343|635 |
| chr8_4 | exon | 25543216 | 25543319 | 25543216 | ID=Msa1320750-mRNA-1:exon:8745;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25543403 | 25543492 | 25543403 | ID=Msa1320750-mRNA-1:exon:8746;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25544769 | 25544852 | 25544769 | ID=Msa1320750-mRNA-1:exon:8747;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25544932 | 25545150 | 25544932 | ID=Msa1320750-mRNA-1:exon:8748;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25546182 | 25546283 | 25546182 | ID=Msa1320750-mRNA-1:exon:8749;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25546650 | 25547108 | 25546650 | ID=Msa1320750-mRNA-1:exon:8750;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25547217 | 25547446 | 25547217 | ID=Msa1320750-mRNA-1:exon:8751;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25548498 | 25548591 | 25548498 | ID=Msa1320750-mRNA-1:exon:8752;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25548682 | 25548861 | 25548682 | ID=Msa1320750-mRNA-1:exon:8753;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25548932 | 25549029 | 25548932 | ID=Msa1320750-mRNA-1:exon:8754;Parent=Msa1320750-mRNA-1 |
| chr8_4 | exon | 25549166 | 25549839 | 25549166 | ID=Msa1320750-mRNA-1:exon:8755;Parent=Msa1320750-mRNA-1 |
| chr8_4 | five_prime_UTR | 25543216 | 25543298 | 25543216 | ID=Msa1320750-mRNA-1:five_prime_utr;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25543299 | 25543319 | 25543299 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25543403 | 25543492 | 25543403 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25544769 | 25544852 | 25544769 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25544932 | 25545150 | 25544932 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25546182 | 25546283 | 25546182 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25546650 | 25547108 | 25546650 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25547217 | 25547446 | 25547217 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25548498 | 25548591 | 25548498 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25548682 | 25548861 | 25548682 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25548932 | 25549029 | 25548932 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | CDS | 25549166 | 25549496 | 25549166 | ID=Msa1320750-mRNA-1:cds;Parent=Msa1320750-mRNA-1 |
| chr8_4 | three_prime_UTR | 25549497 | 25549839 | 25549497 | ID=Msa1320750-mRNA-1:three_prime_utr;Parent=Msa1320750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
