Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117710 | sp|Q9FG23|CK5P3_ARATH | 64.613 | 568 | 178 | 6 | 1 | 564 | 1 | 549 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117710 | A0A072VJQ0 | 97.163 | 564 | 16 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1122 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015130 | Msa0117710 | 0.811065 | 8.434327e-51 | -8.615850e-47 |
| Msa0015390 | Msa0117710 | 0.838356 | 3.018723e-57 | -8.615850e-47 |
| Msa0017070 | Msa0117710 | 0.800833 | 1.197135e-48 | -8.615850e-47 |
| Msa0026910 | Msa0117710 | 0.809479 | 1.853815e-50 | -8.615850e-47 |
| Msa0036140 | Msa0117710 | 0.800552 | 1.365886e-48 | -8.615850e-47 |
| Msa0042920 | Msa0117710 | 0.812089 | 5.051089e-51 | -8.615850e-47 |
| Msa0050370 | Msa0117710 | 0.812298 | 4.549084e-51 | -8.615850e-47 |
| Msa0050380 | Msa0117710 | 0.812214 | 4.745401e-51 | -8.615850e-47 |
| Msa0055740 | Msa0117710 | 0.821435 | 4.044152e-53 | -8.615850e-47 |
| Msa0058600 | Msa0117710 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa0064970 | Msa0117710 | 0.821631 | 3.643038e-53 | -8.615850e-47 |
| Msa0090100 | Msa0117710 | 0.807008 | 6.233060e-50 | -8.615850e-47 |
| Msa0096480 | Msa0117710 | 0.807811 | 4.212916e-50 | -8.615850e-47 |
| Msa0109900 | Msa0117710 | 0.817380 | 3.398254e-52 | -8.615850e-47 |
| Msa0117710 | Msa0117770 | 0.840188 | 1.010463e-57 | -8.615850e-47 |
| Msa0117710 | Msa0122580 | 0.813332 | 2.699984e-51 | -8.615850e-47 |
| Msa0117710 | Msa0131770 | 0.809766 | 1.609092e-50 | -8.615850e-47 |
| Msa0117710 | Msa0142220 | 0.813724 | 2.214871e-51 | -8.615850e-47 |
| Msa0117710 | Msa0143560 | 0.800007 | 1.763632e-48 | -8.615850e-47 |
| Msa0117710 | Msa0145190 | 0.849551 | 3.006902e-60 | -8.615850e-47 |
| Msa0117710 | Msa0151180 | 0.806805 | 6.880536e-50 | -8.615850e-47 |
| Msa0117710 | Msa0188460 | 0.818372 | 2.029139e-52 | -8.615850e-47 |
| Msa0117710 | Msa0201070 | 0.842700 | 2.203067e-58 | -8.615850e-47 |
| Msa0117710 | Msa0206010 | 0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0117710 | Msa0210450 | 0.826628 | 2.444135e-54 | -8.615850e-47 |
| Msa0117710 | Msa0218370 | 0.819401 | 1.183908e-52 | -8.615850e-47 |
| Msa0117710 | Msa0223910 | 0.806686 | 7.292135e-50 | -8.615850e-47 |
| Msa0117710 | Msa0225220 | 0.810100 | 1.363094e-50 | -8.615850e-47 |
| Msa0117710 | Msa0233080 | 0.807508 | 4.885477e-50 | -8.615850e-47 |
| Msa0117710 | Msa0233300 | 0.814115 | 1.815731e-51 | -8.615850e-47 |
| Msa0117710 | Msa0237750 | 0.804417 | 2.182494e-49 | -8.615850e-47 |
| Msa0117710 | Msa0251640 | 0.800927 | 1.145388e-48 | -8.615850e-47 |
| Msa0117710 | Msa0278190 | 0.809502 | 1.833305e-50 | -8.615850e-47 |
| Msa0117710 | Msa0281640 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0117710 | Msa0281930 | 0.838890 | 2.197605e-57 | -8.615850e-47 |
| Msa0117710 | Msa0284520 | 0.809467 | 1.865392e-50 | -8.615850e-47 |
| Msa0117710 | Msa0285450 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa0117710 | Msa0286670 | 0.817702 | 2.874719e-52 | -8.615850e-47 |
| Msa0117710 | Msa0287410 | 0.818558 | 1.840664e-52 | -8.615850e-47 |
| Msa0117710 | Msa0288100 | 0.807127 | 5.883562e-50 | -8.615850e-47 |
| Msa0117710 | Msa0288120 | 0.814002 | 1.923018e-51 | -8.615850e-47 |
| Msa0117710 | Msa0315530 | 0.801414 | 9.107037e-49 | -8.615850e-47 |
| Msa0117710 | Msa0326110 | 0.818943 | 1.505481e-52 | -8.615850e-47 |
| Msa0117710 | Msa0326520 | 0.813678 | 2.266521e-51 | -8.615850e-47 |
| Msa0117710 | Msa0330340 | 0.802323 | 5.924041e-49 | -8.615850e-47 |
| Msa0117710 | Msa0344690 | -0.800039 | 1.737836e-48 | -8.615850e-47 |
| Msa0117710 | Msa0350990 | 0.802370 | 5.794066e-49 | -8.615850e-47 |
| Msa0117710 | Msa0351030 | 0.805195 | 1.501130e-49 | -8.615850e-47 |
| Msa0117710 | Msa0355220 | 0.823413 | 1.403859e-53 | -8.615850e-47 |
| Msa0117710 | Msa0358890 | 0.801975 | 6.984809e-49 | -8.615850e-47 |
| Msa0117710 | Msa0381610 | -0.803254 | 3.805842e-49 | -8.615850e-47 |
| Msa0117710 | Msa0384890 | 0.805773 | 1.135526e-49 | -8.615850e-47 |
| Msa0117710 | Msa0388960 | 0.804151 | 2.479296e-49 | -8.615850e-47 |
| Msa0117710 | Msa0394260 | 0.819730 | 9.964080e-53 | -8.615850e-47 |
| Msa0117710 | Msa0402290 | 0.838617 | 2.585995e-57 | -8.615850e-47 |
| Msa0117710 | Msa0411390 | 0.837707 | 4.435402e-57 | -8.615850e-47 |
| Msa0117710 | Msa0414230 | 0.823017 | 1.736776e-53 | -8.615850e-47 |
| Msa0117710 | Msa0433410 | -0.808249 | 3.398341e-50 | -8.615850e-47 |
| Msa0117710 | Msa0434180 | 0.806897 | 6.579956e-50 | -8.615850e-47 |
| Msa0117710 | Msa0435230 | 0.814533 | 1.468050e-51 | -8.615850e-47 |
| Msa0117710 | Msa0437830 | -0.806234 | 9.082663e-50 | -8.615850e-47 |
| Msa0117710 | Msa0455760 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa0117710 | Msa0458090 | 0.808232 | 3.426539e-50 | -8.615850e-47 |
| Msa0117710 | Msa0479340 | 0.817744 | 2.813001e-52 | -8.615850e-47 |
| Msa0117710 | Msa0484650 | 0.805189 | 1.504966e-49 | -8.615850e-47 |
| Msa0117710 | Msa0484780 | 0.823689 | 1.209697e-53 | -8.615850e-47 |
| Msa0117710 | Msa0493000 | 0.806652 | 7.412822e-50 | -8.615850e-47 |
| Msa0117710 | Msa0502340 | 0.819865 | 9.278514e-53 | -8.615850e-47 |
| Msa0117710 | Msa0520700 | 0.818883 | 1.553668e-52 | -8.615850e-47 |
| Msa0117710 | Msa0521270 | 0.830946 | 2.205594e-55 | -8.615850e-47 |
| Msa0117710 | Msa0531180 | 0.806064 | 9.862959e-50 | -8.615850e-47 |
| Msa0117710 | Msa0532350 | 0.821109 | 4.807346e-53 | -8.615850e-47 |
| Msa0117710 | Msa0535630 | 0.802573 | 5.261554e-49 | -8.615850e-47 |
| Msa0117710 | Msa0571630 | 0.818695 | 1.714080e-52 | -8.615850e-47 |
| Msa0117710 | Msa0585230 | 0.829189 | 5.917353e-55 | -8.615850e-47 |
| Msa0117710 | Msa0598780 | 0.806793 | 6.922893e-50 | -8.615850e-47 |
| Msa0117710 | Msa0598790 | 0.818393 | 2.006305e-52 | -8.615850e-47 |
| Msa0117710 | Msa0616070 | 0.801807 | 7.562425e-49 | -8.615850e-47 |
| Msa0117710 | Msa0629450 | 0.802515 | 5.409667e-49 | -8.615850e-47 |
| Msa0117710 | Msa0633700 | 0.805582 | 1.245404e-49 | -8.615850e-47 |
| Msa0117710 | Msa0652940 | 0.806002 | 1.016319e-49 | -8.615850e-47 |
| Msa0117710 | Msa0654310 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
| Msa0117710 | Msa0659400 | 0.832300 | 1.022901e-55 | -8.615850e-47 |
| Msa0117710 | Msa0661650 | 0.809668 | 1.688792e-50 | -8.615850e-47 |
| Msa0117710 | Msa0663240 | 0.831645 | 1.484675e-55 | -8.615850e-47 |
| Msa0117710 | Msa0672690 | 0.809390 | 1.937573e-50 | -8.615850e-47 |
| Msa0117710 | Msa0685900 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
| Msa0117710 | Msa0688070 | 0.802604 | 5.184871e-49 | -8.615850e-47 |
| Msa0117710 | Msa0688480 | 0.832908 | 7.227177e-56 | -8.615850e-47 |
| Msa0117710 | Msa0697060 | 0.823466 | 1.364021e-53 | -8.615850e-47 |
| Msa0117710 | Msa0711830 | 0.804468 | 2.129589e-49 | -8.615850e-47 |
| Msa0117710 | Msa0715470 | 0.812950 | 3.275328e-51 | -8.615850e-47 |
| Msa0117710 | Msa0722720 | 0.805740 | 1.153724e-49 | -8.615850e-47 |
| Msa0117710 | Msa0724210 | 0.807177 | 5.742036e-50 | -8.615850e-47 |
| Msa0117710 | Msa0726040 | 0.800608 | 1.330811e-48 | -8.615850e-47 |
| Msa0117710 | Msa0731940 | 0.818384 | 2.016185e-52 | -8.615850e-47 |
| Msa0117710 | Msa0735170 | 0.811263 | 7.641487e-51 | -8.615850e-47 |
| Msa0117710 | Msa0750240 | 0.805683 | 1.185651e-49 | -8.615850e-47 |
| Msa0117710 | Msa0759410 | 0.802523 | 5.387607e-49 | -8.615850e-47 |
| Msa0117710 | Msa0762360 | 0.803107 | 4.081747e-49 | -8.615850e-47 |
| Msa0117710 | Msa0766090 | 0.803976 | 2.695254e-49 | -8.615850e-47 |
| Msa0117710 | Msa0766630 | 0.848958 | 4.399157e-60 | -8.615850e-47 |
| Msa0117710 | Msa0775190 | 0.803423 | 3.511391e-49 | -8.615850e-47 |
| Msa0117710 | Msa0790510 | 0.801142 | 1.035288e-48 | -8.615850e-47 |
| Msa0117710 | Msa0800210 | 0.803881 | 2.820897e-49 | -8.615850e-47 |
| Msa0117710 | Msa0810220 | 0.802491 | 5.471341e-49 | -8.615850e-47 |
| Msa0117710 | Msa0813400 | 0.801751 | 7.766620e-49 | -8.615850e-47 |
| Msa0117710 | Msa0828850 | 0.824099 | 9.695680e-54 | -8.615850e-47 |
| Msa0117710 | Msa0830510 | 0.805621 | 1.221966e-49 | -8.615850e-47 |
| Msa0117710 | Msa0831850 | 0.832699 | 8.145089e-56 | -8.615850e-47 |
| Msa0117710 | Msa0832090 | 0.802431 | 5.627589e-49 | -8.615850e-47 |
| Msa0117710 | Msa0832150 | 0.804175 | 2.450974e-49 | -8.615850e-47 |
| Msa0117710 | Msa0842710 | 0.818919 | 1.524227e-52 | -8.615850e-47 |
| Msa0117710 | Msa0846770 | 0.812866 | 3.417924e-51 | -8.615850e-47 |
| Msa0117710 | Msa0900620 | 0.818021 | 2.435818e-52 | -8.615850e-47 |
| Msa0117710 | Msa0907260 | 0.800705 | 1.271466e-48 | -8.615850e-47 |
| Msa0117710 | Msa0907690 | 0.820353 | 7.173299e-53 | -8.615850e-47 |
| Msa0117710 | Msa0927380 | 0.805071 | 1.593021e-49 | -8.615850e-47 |
| Msa0117710 | Msa0929070 | 0.800016 | 1.756480e-48 | -8.615850e-47 |
| Msa0117710 | Msa0931520 | 0.817807 | 2.722742e-52 | -8.615850e-47 |
| Msa0117710 | Msa0933100 | 0.805795 | 1.123212e-49 | -8.615850e-47 |
| Msa0117710 | Msa0935910 | 0.817049 | 4.034682e-52 | -8.615850e-47 |
| Msa0117710 | Msa0966090 | 0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa0117710 | Msa0967280 | 0.819798 | 9.611789e-53 | -8.615850e-47 |
| Msa0117710 | Msa0969450 | 0.822883 | 1.866827e-53 | -8.615850e-47 |
| Msa0117710 | Msa0969520 | 0.811995 | 5.296590e-51 | -8.615850e-47 |
| Msa0117710 | Msa0992050 | 0.803417 | 3.520771e-49 | -8.615850e-47 |
| Msa0117710 | Msa0993780 | 0.803380 | 3.584587e-49 | -8.615850e-47 |
| Msa0117710 | Msa0998680 | 0.812828 | 3.483924e-51 | -8.615850e-47 |
| Msa0117710 | Msa1004840 | 0.822044 | 2.924159e-53 | -8.615850e-47 |
| Msa0117710 | Msa1023450 | 0.803845 | 2.869786e-49 | -8.615850e-47 |
| Msa0117710 | Msa1023950 | 0.840945 | 6.402377e-58 | -8.615850e-47 |
| Msa0117710 | Msa1028970 | 0.817301 | 3.540912e-52 | -8.615850e-47 |
| Msa0117710 | Msa1032850 | 0.823083 | 1.676733e-53 | -8.615850e-47 |
| Msa0117710 | Msa1035480 | 0.801025 | 1.093981e-48 | -8.615850e-47 |
| Msa0117710 | Msa1052830 | 0.806666 | 7.363032e-50 | -8.615850e-47 |
| Msa0117710 | Msa1063860 | 0.811357 | 7.290566e-51 | -8.615850e-47 |
| Msa0117710 | Msa1065570 | 0.834218 | 3.403578e-56 | -8.615850e-47 |
| Msa0117710 | Msa1075220 | -0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0117710 | Msa1075650 | 0.828849 | 7.153485e-55 | -8.615850e-47 |
| Msa0117710 | Msa1080960 | 0.823409 | 1.406871e-53 | -8.615850e-47 |
| Msa0117710 | Msa1081330 | 0.801263 | 9.779653e-49 | -8.615850e-47 |
| Msa0117710 | Msa1081590 | 0.827588 | 1.439895e-54 | -8.615850e-47 |
| Msa0117710 | Msa1082500 | 0.821161 | 4.678187e-53 | -8.615850e-47 |
| Msa0117710 | Msa1082580 | 0.808733 | 2.679298e-50 | -8.615850e-47 |
| Msa0117710 | Msa1111870 | 0.807497 | 4.911481e-50 | -8.615850e-47 |
| Msa0117710 | Msa1116260 | 0.825870 | 3.702272e-54 | -8.615850e-47 |
| Msa0117710 | Msa1117150 | 0.804398 | 2.202523e-49 | -8.615850e-47 |
| Msa0117710 | Msa1117170 | 0.822170 | 2.734025e-53 | -8.615850e-47 |
| Msa0117710 | Msa1119480 | 0.808432 | 3.106695e-50 | -8.615850e-47 |
| Msa0117710 | Msa1119940 | 0.802090 | 6.615527e-49 | -8.615850e-47 |
| Msa0117710 | Msa1120740 | 0.802685 | 4.988861e-49 | -8.615850e-47 |
| Msa0117710 | Msa1121490 | 0.813400 | 2.609559e-51 | -8.615850e-47 |
| Msa0117710 | Msa1137570 | 0.809334 | 1.992037e-50 | -8.615850e-47 |
| Msa0117710 | Msa1152440 | 0.818000 | 2.463110e-52 | -8.615850e-47 |
| Msa0117710 | Msa1174040 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
| Msa0117710 | Msa1193290 | 0.804256 | 2.357265e-49 | -8.615850e-47 |
| Msa0117710 | Msa1195190 | 0.816353 | 5.776497e-52 | -8.615850e-47 |
| Msa0117710 | Msa1205370 | 0.803165 | 3.971053e-49 | -8.615850e-47 |
| Msa0117710 | Msa1224480 | 0.803715 | 3.054187e-49 | -8.615850e-47 |
| Msa0117710 | Msa1228590 | 0.802179 | 6.344518e-49 | -8.615850e-47 |
| Msa0117710 | Msa1234970 | 0.807093 | 5.981954e-50 | -8.615850e-47 |
| Msa0117710 | Msa1246360 | 0.813769 | 2.164251e-51 | -8.615850e-47 |
| Msa0117710 | Msa1246510 | 0.800214 | 1.600875e-48 | -8.615850e-47 |
| Msa0117710 | Msa1249490 | 0.806910 | 6.537676e-50 | -8.615850e-47 |
| Msa0117710 | Msa1250290 | 0.816210 | 6.219166e-52 | -8.615850e-47 |
| Msa0117710 | Msa1268880 | 0.809662 | 1.693475e-50 | -8.615850e-47 |
| Msa0117710 | Msa1282580 | -0.826020 | 3.411248e-54 | -8.615850e-47 |
| Msa0117710 | Msa1284680 | 0.829561 | 4.805630e-55 | -8.615850e-47 |
| Msa0117710 | Msa1297290 | 0.827902 | 1.210696e-54 | -8.615850e-47 |
| Msa0117710 | Msa1307030 | 0.828615 | 8.145975e-55 | -8.615850e-47 |
| Msa0117710 | Msa1310700 | 0.812967 | 3.247730e-51 | -8.615850e-47 |
| Msa0117710 | Msa1313140 | 0.801631 | 8.220772e-49 | -8.615850e-47 |
| Msa0117710 | Msa1320750 | 0.807218 | 5.626679e-50 | -8.615850e-47 |
| Msa0117710 | Msa1353470 | 0.835513 | 1.606179e-56 | -8.615850e-47 |
| Msa0117710 | Msa1362670 | 0.841282 | 5.221705e-58 | -8.615850e-47 |
| Msa0117710 | Msa1372760 | 0.816526 | 5.284459e-52 | -8.615850e-47 |
| Msa0117710 | Msa1373030 | 0.811899 | 5.557039e-51 | -8.615850e-47 |
| Msa0117710 | Msa1385000 | 0.828048 | 1.116545e-54 | -8.615850e-47 |
| Msa0117710 | Msa1397610 | 0.813718 | 2.221104e-51 | -8.615850e-47 |
| Msa0117710 | Msa1397860 | 0.824547 | 7.609966e-54 | -8.615850e-47 |
| Msa0117710 | Msa1403480 | 0.833914 | 4.055275e-56 | -8.615850e-47 |
| Msa0117710 | Msa1411020 | 0.830791 | 2.407213e-55 | -8.615850e-47 |
| Msa0117710 | Msa1420140 | 0.807171 | 5.758447e-50 | -8.615850e-47 |
| Msa0117710 | Msa1420490 | 0.837981 | 3.771044e-57 | -8.615850e-47 |
| Msa0117710 | Msa1420820 | 0.834034 | 3.783788e-56 | -8.615850e-47 |
| Msa0117710 | Msa1423390 | 0.835744 | 1.403869e-56 | -8.615850e-47 |
| Msa0117710 | Msa1423880 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0117710 | Msa1424290 | 0.830640 | 2.621438e-55 | -8.615850e-47 |
| Msa0117710 | Msa1425100 | 0.804953 | 1.686597e-49 | -8.615850e-47 |
| Msa0117710 | Msa1434350 | 0.826726 | 2.315369e-54 | -8.615850e-47 |
| Msa0117710 | Msa1439320 | 0.833509 | 5.121006e-56 | -8.615850e-47 |
| Msa0117710 | Msa1440370 | 0.838813 | 2.300230e-57 | -8.615850e-47 |
| Msa0117710 | Msa1440740 | 0.808040 | 3.765282e-50 | -8.615850e-47 |
| Msa0117710 | Msa1440810 | 0.835612 | 1.516380e-56 | -8.615850e-47 |
| Msa0117710 | Msa1443060 | 0.813966 | 1.958885e-51 | -8.615850e-47 |
| Msa0117710 | Msa1448640 | 0.816531 | 5.270747e-52 | -8.615850e-47 |
| Msa0117710 | Msa1451620 | -0.803432 | 3.496782e-49 | -8.615850e-47 |
| Msa0117710 | Msa1453560 | 0.820104 | 8.180219e-53 | -8.615850e-47 |
| Msa0117710 | Msa1454620 | 0.814748 | 1.315638e-51 | -8.615850e-47 |
| Msa0117710 | Msa1463900 | 0.817171 | 3.786996e-52 | -8.615850e-47 |
| Msa0117710 | Msa1466540 | 0.820646 | 6.145136e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117710 | MtrunA17_Chr1g0174831 | 97.163 | 564 | 16 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0117710 | AT5G06830.1 | 64.613 | 568 | 178 | 6 | 1 | 564 | 1 | 549 | 0.0 | 717 |
Find 127 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATATTTGGTCGTCTTTC+AGG | 0.144776 | 1_3:+39349379 | Msa0117710:CDS |
| CTGACAAGCTTCAACGTATT+TGG | 0.165391 | 1_3:-39349808 | None:intergenic |
| GCTCAGTCAAATGGTAATTT+TGG | 0.172570 | 1_3:-39347764 | None:intergenic |
| GGAAGGCCAGTTAATATAAT+TGG | 0.182964 | 1_3:+39352793 | Msa0117710:CDS |
| CAACTCAATTCAACAACTTC+TGG | 0.187109 | 1_3:-39347802 | None:intergenic |
| AAAATACTGAATAAATTTAT+AGG | 0.210348 | 1_3:+39352925 | Msa0117710:three_prime_UTR |
| CAGGGTCTAGGGTTTGAAAA+AGG | 0.219060 | 1_3:-39348182 | None:intergenic |
| ACTTCCACATTGCTTTCTTC+TGG | 0.239347 | 1_3:-39350342 | None:intergenic |
| AATGCAAAGTGATATTTCTT+TGG | 0.266738 | 1_3:+39351123 | Msa0117710:CDS |
| ATCTCCCCAATTATATTAAC+TGG | 0.274045 | 1_3:-39352799 | None:intergenic |
| TAATGTCAGATTAGAACTTT+TGG | 0.282447 | 1_3:+39349919 | Msa0117710:CDS |
| TTGATCTTGCAAGAAGATAT+TGG | 0.295724 | 1_3:+39353119 | Msa0117710:three_prime_UTR |
| AATTCTTCGTTTGATATTGT+TGG | 0.306909 | 1_3:-39350537 | None:intergenic |
| GACTCTGAGGTTATTAATAT+TGG | 0.309283 | 1_3:+39350288 | Msa0117710:CDS |
| CAATTTCATTGCTGACAAAT+AGG | 0.323606 | 1_3:+39351146 | Msa0117710:CDS |
| AAAGTATAACTCACTTGTTT+TGG | 0.328584 | 1_3:-39351461 | None:intergenic |
| CTGATAGTGATGAAGCCTTT+TGG | 0.328636 | 1_3:+39352884 | Msa0117710:three_prime_UTR |
| TTTAGGGATTGGTTATTTAG+AGG | 0.332872 | 1_3:+39349309 | Msa0117710:intron |
| TGGAAAGTTCACAAATTGAT+TGG | 0.357253 | 1_3:+39350397 | Msa0117710:CDS |
| GAAGGCCAGTTAATATAATT+GGG | 0.364813 | 1_3:+39352794 | Msa0117710:CDS |
| ACAATATCAAACGAAGAATT+AGG | 0.385732 | 1_3:+39350540 | Msa0117710:CDS |
| AAAACAAACCTTCAGGGTCT+AGG | 0.387153 | 1_3:-39348194 | None:intergenic |
| AGACAGACTAGTAAACTCTT+TGG | 0.390215 | 1_3:+39351343 | Msa0117710:CDS |
| TATTATTTGGCTAGGGTGCT+TGG | 0.392305 | 1_3:+39349474 | Msa0117710:intron |
| ATGTGAAAATAAGAACAAAA+AGG | 0.395006 | 1_3:-39352964 | None:intergenic |
| TAATATCAGAGCAAGAATAA+TGG | 0.397936 | 1_3:-39353144 | None:intergenic |
| GAGGCATTAATGATTTCATA+TGG | 0.400164 | 1_3:-39350468 | None:intergenic |
| TGCACCTGTTTCCTCTGATA+AGG | 0.401811 | 1_3:-39349711 | None:intergenic |
| ACACTTTCATCCATGTTTGA+TGG | 0.404738 | 1_3:+39352772 | Msa0117710:CDS |
| TCTGTCTAATTCAAAAGAAC+AGG | 0.407323 | 1_3:-39352989 | None:intergenic |
| TTGTCAGGAGCTTGGCCTAC+AGG | 0.414431 | 1_3:+39349824 | Msa0117710:CDS |
| TTGCTGCTCCTGACATTGAC+TGG | 0.415578 | 1_3:+39350364 | Msa0117710:CDS |
| ACGGAAAGTAGGAACATATT+TGG | 0.415933 | 1_3:+39349367 | Msa0117710:CDS |
| AAATACTGAATAAATTTATA+GGG | 0.417175 | 1_3:+39352926 | Msa0117710:three_prime_UTR |
| ATGAAGCTATTTGTGGTACT+TGG | 0.417992 | 1_3:+39353074 | Msa0117710:three_prime_UTR |
| TTCTTCTCTGCTCAGTCAAA+TGG | 0.421560 | 1_3:-39347773 | None:intergenic |
| AAGCACGTTTAGCAGGATCT+TGG | 0.431282 | 1_3:+39349961 | Msa0117710:CDS |
| TCACAAATTGATTGGGACAT+TGG | 0.431406 | 1_3:+39350405 | Msa0117710:CDS |
| ATATGGACCCAAGCCATTAC+CGG | 0.432848 | 1_3:-39350451 | None:intergenic |
| ACTCTGTTGACCAGTGGTCT+TGG | 0.434928 | 1_3:+39352826 | Msa0117710:CDS |
| GTCAACTGAGATAAGGCATC+TGG | 0.441830 | 1_3:-39350669 | None:intergenic |
| CAAATACGTTGAAGCTTGTC+AGG | 0.443888 | 1_3:+39349809 | Msa0117710:CDS |
| GGAAAGTTCACAAATTGATT+GGG | 0.448608 | 1_3:+39350398 | Msa0117710:CDS |
| GTTATAAATGAAGCTATTTG+TGG | 0.453076 | 1_3:+39353067 | Msa0117710:three_prime_UTR |
| CGAGGATACCGGTAATGGCT+TGG | 0.455046 | 1_3:+39350443 | Msa0117710:CDS |
| ATTATTTGGCTAGGGTGCTT+GGG | 0.455346 | 1_3:+39349475 | Msa0117710:intron |
| CACTTCCAAGCACGTTTAGC+AGG | 0.464192 | 1_3:+39349954 | Msa0117710:CDS |
| GAGGATACCGGTAATGGCTT+GGG | 0.472944 | 1_3:+39350444 | Msa0117710:CDS |
| GAAAGACGGGTTGAAGGACT+TGG | 0.474948 | 1_3:+39351394 | Msa0117710:CDS |
| AAACAAACCTTCAGGGTCTA+GGG | 0.476235 | 1_3:-39348193 | None:intergenic |
| GGAAAAGAGTACCTTCTGAT+TGG | 0.478280 | 1_3:+39348088 | Msa0117710:CDS |
| TTGAAGAATGGTTGGTCGAT+CGG | 0.484184 | 1_3:+39348067 | Msa0117710:intron |
| GAAATATCCCAGTCAATGTC+AGG | 0.486100 | 1_3:-39350372 | None:intergenic |
| AAGTCCTTATCAGAGGAAAC+AGG | 0.490424 | 1_3:+39349707 | Msa0117710:intron |
| GCTCACATGCAGATATATGC+TGG | 0.490986 | 1_3:+39350562 | Msa0117710:CDS |
| AAGATCCTGCTAAACGTGCT+TGG | 0.492514 | 1_3:-39349959 | None:intergenic |
| TTATGATTCTCAACTCCAAA+AGG | 0.493920 | 1_3:+39351185 | Msa0117710:CDS |
| AAAAGGGGATCAGAATCCTT+AGG | 0.511257 | 1_3:-39348165 | None:intergenic |
| CAGACTAGTAAACTCTTTGG+AGG | 0.513990 | 1_3:+39351346 | Msa0117710:CDS |
| GTTGAAGCTTGTCAGGAGCT+TGG | 0.515681 | 1_3:+39349816 | Msa0117710:CDS |
| TGTTATCTTTGAAGAATGGT+TGG | 0.516651 | 1_3:+39348059 | Msa0117710:intron |
| GAATGCATCAAATGCCGTAC+TGG | 0.523482 | 1_3:+39350629 | Msa0117710:CDS |
| TTAAATCATTCTTAAATCAA+CGG | 0.523895 | 1_3:+39350999 | Msa0117710:CDS |
| CAGTGTTCATTCAAGTAACA+AGG | 0.526568 | 1_3:+39350311 | Msa0117710:CDS |
| TAGAGATGCTCACACTGAAA+AGG | 0.527240 | 1_3:+39350039 | Msa0117710:CDS |
| TGCAGTCACTATCCACCAAA+AGG | 0.533146 | 1_3:-39352899 | None:intergenic |
| TCTTCTTGCAAGATCAATGA+AGG | 0.533636 | 1_3:-39353113 | None:intergenic |
| CAAGTTGAAAGACGGGTTGA+AGG | 0.533639 | 1_3:+39351388 | Msa0117710:CDS |
| ATTGTATAGTCTTGAGCCAA+AGG | 0.535332 | 1_3:-39353026 | None:intergenic |
| GTTCTCTGTCAACTGAGATA+AGG | 0.538450 | 1_3:-39350676 | None:intergenic |
| TGTACTCCGTGTCTAAAAGC+TGG | 0.541805 | 1_3:-39350713 | None:intergenic |
| TGAAGTCTACTACGGAAAGT+AGG | 0.544788 | 1_3:+39349356 | Msa0117710:CDS |
| ATGAAGTCAAGTTGAAAGAC+GGG | 0.545553 | 1_3:+39351381 | Msa0117710:CDS |
| AAACAGTGACAACATTTCAC+TGG | 0.546636 | 1_3:+39349991 | Msa0117710:CDS |
| TTTCATCCATGTTTGATGGA+AGG | 0.547085 | 1_3:+39352776 | Msa0117710:CDS |
| TCAACAGCAACATTTAAAGA+TGG | 0.547432 | 1_3:-39350267 | None:intergenic |
| ATAATGATTGCAGAGATCTT+CGG | 0.548460 | 1_3:+39350203 | Msa0117710:intron |
| AGTTGATGAAGAAGTCTGAA+TGG | 0.553738 | 1_3:-39350496 | None:intergenic |
| CAAGCCATTACCGGTATCCT+CGG | 0.554447 | 1_3:-39350442 | None:intergenic |
| GGAAGGTTGCGAATATCGTC+GGG | 0.555634 | 1_3:-39347926 | None:intergenic |
| GAAACCGAGGATACCGGTAA+TGG | 0.556283 | 1_3:+39350438 | Msa0117710:CDS |
| GTCGCTACAAAATCAAGTAC+AGG | 0.556442 | 1_3:+39351051 | Msa0117710:CDS |
| TGGAAGGTTGCGAATATCGT+CGG | 0.557579 | 1_3:-39347927 | None:intergenic |
| TGACAGAGAACAAGGAAGGA+AGG | 0.562828 | 1_3:+39350688 | Msa0117710:CDS |
| AGAAGACTGGTTGTCCAGTA+CGG | 0.564471 | 1_3:-39350643 | None:intergenic |
| AGAATTCGTTATCTTCATTG+TGG | 0.565216 | 1_3:+39351438 | Msa0117710:CDS |
| CTCACATGCAGATATATGCT+GGG | 0.570752 | 1_3:+39350563 | Msa0117710:CDS |
| TTAGAAGAAACCGAGGATAC+CGG | 0.572202 | 1_3:+39350432 | Msa0117710:CDS |
| ATCTCAGTTGACAGAGAACA+AGG | 0.579381 | 1_3:+39350680 | Msa0117710:CDS |
| AAATGTTGCTGTTGACTCTG+AGG | 0.584835 | 1_3:+39350275 | Msa0117710:CDS |
| CATTGACTGGGATATTTCAG+TGG | 0.585460 | 1_3:+39350377 | Msa0117710:CDS |
| GGGGATCAGAATCCTTAGGA+AGG | 0.587029 | 1_3:-39348161 | None:intergenic |
| TAGCTTCATTTATAACATGT+CGG | 0.592775 | 1_3:-39353060 | None:intergenic |
| TCATCATGCTCCAAGACCAC+TGG | 0.593689 | 1_3:-39352836 | None:intergenic |
| TATTATGAAGTCCTTATCAG+AGG | 0.594604 | 1_3:+39349700 | Msa0117710:intron |
| AGGCATCTGGAAGAGAAGAC+TGG | 0.595558 | 1_3:-39350656 | None:intergenic |
| CATGAAGTCAAGTTGAAAGA+CGG | 0.596676 | 1_3:+39351380 | Msa0117710:CDS |
| TATTCTCTTGAAGTCTACTA+CGG | 0.597945 | 1_3:+39349348 | Msa0117710:CDS |
| GCTTGCAGAACTCGATCGCA+AGG | 0.600448 | 1_3:+39349749 | Msa0117710:CDS |
| AAAGGCTTCATCACTATCAG+AGG | 0.602142 | 1_3:-39352881 | None:intergenic |
| TGGTCGTCTTTCAGGTTCTG+CGG | 0.602425 | 1_3:+39349387 | Msa0117710:CDS |
| TTTCAAACCCTAGACCCTGA+AGG | 0.603613 | 1_3:+39348186 | Msa0117710:CDS |
| ACAGCAACATTTAAAGATGG+AGG | 0.608554 | 1_3:-39350264 | None:intergenic |
| CATTGTCTCTATAGTATCAG+CGG | 0.608655 | 1_3:-39351104 | None:intergenic |
| GGACTTGGCTACTAAGCGCA+TGG | 0.609522 | 1_3:+39351409 | Msa0117710:CDS |
| TCTTCATCAACTGAGGATGT+CGG | 0.609968 | 1_3:+39350507 | Msa0117710:CDS |
| AAGCTGTACTGCAAAACTTG+AGG | 0.612074 | 1_3:+39350226 | Msa0117710:CDS |
| TAATAAGTGCAGCCTCGCCA+AGG | 0.613858 | 1_3:-39349535 | None:intergenic |
| TCAGACTTCTTCATCAACTG+AGG | 0.616971 | 1_3:+39350500 | Msa0117710:CDS |
| AAACGCTTTCTCCAATCAGA+AGG | 0.618997 | 1_3:-39348099 | None:intergenic |
| CAGTTGACAGAGAACAAGGA+AGG | 0.619413 | 1_3:+39350684 | Msa0117710:CDS |
| AACTGGCCTTCCATCAAACA+TGG | 0.622596 | 1_3:-39352782 | None:intergenic |
| TGCTGCTCCTGACATTGACT+GGG | 0.628895 | 1_3:+39350365 | Msa0117710:CDS |
| GGCATACTGCTGTAGTACGA+AGG | 0.637207 | 1_3:-39351083 | None:intergenic |
| AATTAAGGCACAAATTGCAA+AGG | 0.641567 | 1_3:+39348128 | Msa0117710:CDS |
| GCATACTGCTGTAGTACGAA+GGG | 0.641740 | 1_3:-39351082 | None:intergenic |
| GGGATCAGAATCCTTAGGAA+GGG | 0.647166 | 1_3:-39348160 | None:intergenic |
| AGAAGTCTGAATGGCCTCAG+AGG | 0.648406 | 1_3:-39350487 | None:intergenic |
| ATCAATACTCTGTTGACCAG+TGG | 0.648635 | 1_3:+39352820 | Msa0117710:CDS |
| TGAAATCATTAATGCCTCTG+AGG | 0.656287 | 1_3:+39350473 | Msa0117710:CDS |
| AAGGCCAGTTAATATAATTG+GGG | 0.665384 | 1_3:+39352795 | Msa0117710:CDS |
| TGGAACTTTAGAAGAAACCG+AGG | 0.679048 | 1_3:+39350425 | Msa0117710:CDS |
| TGCAGAACTCGATCGCAAGG+AGG | 0.696335 | 1_3:+39349752 | Msa0117710:CDS |
| AAATCCAGAAGAAAGCAATG+TGG | 0.719326 | 1_3:+39350338 | Msa0117710:CDS |
| GCTACAAAATCAAGTACAGG+CGG | 0.724221 | 1_3:+39351054 | Msa0117710:CDS |
| GATTCTCGATGATCTATACG+AGG | 0.740075 | 1_3:+39350743 | Msa0117710:CDS |
| GTTAGCTGAATTGAAGAACG+AGG | 0.745851 | 1_3:+39351021 | Msa0117710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGTATGAAATTTTTA+TGG | + | chr1_3:39350969-39350988 | Msa0117710:intron | 10.0% |
| !! | AAAATACTGAATAAATTTAT+AGG | + | chr1_3:39352925-39352944 | Msa0117710:three_prime_UTR | 10.0% |
| !! | AAATACTGAATAAATTTATA+GGG | + | chr1_3:39352926-39352945 | Msa0117710:three_prime_UTR | 10.0% |
| !! | ATTGAAATTGAAATTGAAAA+GGG | - | chr1_3:39348002-39348021 | None:intergenic | 15.0% |
| !! | AATTGAAATTGAAATTGAAA+AGG | - | chr1_3:39348003-39348022 | None:intergenic | 15.0% |
| !!! | AATTTCAATTTCTTCAATTT+TGG | + | chr1_3:39348019-39348038 | Msa0117710:intron | 15.0% |
| !! | TATTTAATTAAGTGTATGTT+TGG | - | chr1_3:39349090-39349109 | None:intergenic | 15.0% |
| !!! | TTTTGAATTATTTGTATAGA+AGG | + | chr1_3:39350135-39350154 | Msa0117710:intron | 15.0% |
| !! | CTTGTTTGAATAAATTAATT+AGG | + | chr1_3:39350174-39350193 | Msa0117710:intron | 15.0% |
| !! | TTGAATAAATTAATTAGGAT+TGG | + | chr1_3:39350179-39350198 | Msa0117710:intron | 15.0% |
| !! | ACAAAAATTAAGATTTAGTA+TGG | - | chr1_3:39350957-39350976 | None:intergenic | 15.0% |
| !! | TTAAATCATTCTTAAATCAA+CGG | + | chr1_3:39350999-39351018 | Msa0117710:CDS | 15.0% |
| !! | AGAAAAAAAAAAACAAAGAA+TGG | - | chr1_3:39351591-39351610 | None:intergenic | 15.0% |
| !! | TATATCATTTAGACAAATAA+AGG | + | chr1_3:39351899-39351918 | Msa0117710:intron | 15.0% |
| !! | AAAATTGAAAATAAATCACA+TGG | - | chr1_3:39352431-39352450 | None:intergenic | 15.0% |
| !! | AAGATAACAAAATTCGAAAT+CGG | - | chr1_3:39348048-39348067 | None:intergenic | 20.0% |
| !!! | ATTTTGTTATCTTTGAAGAA+TGG | + | chr1_3:39348055-39348074 | Msa0117710:intron | 20.0% |
| !! | TAAAAAAAAACAAACCTTCA+GGG | - | chr1_3:39348203-39348222 | None:intergenic | 20.0% |
| !! | ATAAAAAAAAACAAACCTTC+AGG | - | chr1_3:39348204-39348223 | None:intergenic | 20.0% |
| !! | GTTATGAAACAAAATGTATT+TGG | + | chr1_3:39348248-39348267 | Msa0117710:intron | 20.0% |
| !!! | GATTTTGATACACAATAATT+TGG | + | chr1_3:39348358-39348377 | Msa0117710:intron | 20.0% |
| !! | TTGATTGTGTAAAATTGATT+CGG | + | chr1_3:39348424-39348443 | Msa0117710:intron | 20.0% |
| !! | TGAGTTAAAATTGAAATTTG+TGG | + | chr1_3:39348502-39348521 | Msa0117710:intron | 20.0% |
| !! | GAGTTAAAATTGAAATTTGT+GGG | + | chr1_3:39348503-39348522 | Msa0117710:intron | 20.0% |
| !!! | TTGTTGATTGTAAGAAATTT+TGG | + | chr1_3:39349232-39349251 | Msa0117710:intron | 20.0% |
| !!! | CATTGCTTTATCTTTTTTTA+GGG | + | chr1_3:39349293-39349312 | Msa0117710:intron | 20.0% |
| !!! | TGTGTTTATTTTCTGTTAAA+TGG | + | chr1_3:39349862-39349881 | Msa0117710:intron | 20.0% |
| !!! | AAATATCAAGTAATACCTTT+TGG | - | chr1_3:39351203-39351222 | None:intergenic | 20.0% |
| !! | TATATATATTCTTTGCGTTA+AGG | + | chr1_3:39351288-39351307 | Msa0117710:intron | 20.0% |
| !! | AAAAAAAAACAAAGAATGGA+AGG | - | chr1_3:39351587-39351606 | None:intergenic | 20.0% |
| !! | TTGAAAAATAATGAACTTAG+TGG | - | chr1_3:39351871-39351890 | None:intergenic | 20.0% |
| !! | ATAAGAGAAATAGAGATAAA+GGG | - | chr1_3:39352551-39352570 | None:intergenic | 20.0% |
| !! | AATAAGAGAAATAGAGATAA+AGG | - | chr1_3:39352552-39352571 | None:intergenic | 20.0% |
| !! | ATGTGAAAATAAGAACAAAA+AGG | - | chr1_3:39352967-39352986 | None:intergenic | 20.0% |
| ! | ATTGAAATTGAAAAGGGAAA+TGG | - | chr1_3:39347996-39348015 | None:intergenic | 25.0% |
| !!! | ACAATAATTTGGTGTATGTT+TGG | + | chr1_3:39348369-39348388 | Msa0117710:intron | 25.0% |
| !! | AATGTATTCTATTTGAAGCT+AGG | - | chr1_3:39348562-39348581 | None:intergenic | 25.0% |
| !! | GCTTCAAATAGAATACATTT+TGG | + | chr1_3:39348563-39348582 | Msa0117710:intron | 25.0% |
| !! | TCAAATAGAATACATTTTGG+AGG | + | chr1_3:39348566-39348585 | Msa0117710:intron | 25.0% |
| !!! | AATTTTGGCTCATCTTAAAA+TGG | + | chr1_3:39348651-39348670 | Msa0117710:intron | 25.0% |
| !! | TTGATTAAAAGTGAGTTGAA+TGG | + | chr1_3:39348879-39348898 | Msa0117710:intron | 25.0% |
| !!! | CTTCAAGTTAGAAATGATTT+TGG | + | chr1_3:39348973-39348992 | Msa0117710:intron | 25.0% |
| !!! | CTTTTTAGCAGAATTGATTT+TGG | - | chr1_3:39349001-39349020 | None:intergenic | 25.0% |
| !!! | TACACATCTAGATTTGATTT+TGG | + | chr1_3:39349047-39349066 | Msa0117710:intron | 25.0% |
| !! | TTGATTGTAAGAAATTTTGG+TGG | + | chr1_3:39349235-39349254 | Msa0117710:intron | 25.0% |
| !!! | TGATTGTAAGAAATTTTGGT+GGG | + | chr1_3:39349236-39349255 | Msa0117710:intron | 25.0% |
| !!! | GCATTGCTTTATCTTTTTTT+AGG | + | chr1_3:39349292-39349311 | Msa0117710:intron | 25.0% |
| !!! | CTTTATCTTTTTTTAGGGAT+TGG | + | chr1_3:39349298-39349317 | Msa0117710:intron | 25.0% |
| !!! | ATACTTTTTCTTAGTGATTC+TGG | + | chr1_3:39349420-39349439 | Msa0117710:intron | 25.0% |
| ! | TCGTCATTGTCAATATTATT+TGG | + | chr1_3:39349461-39349480 | Msa0117710:intron | 25.0% |
| ! | ATTGTCAATATTATTTGGCT+AGG | + | chr1_3:39349466-39349485 | Msa0117710:intron | 25.0% |
| ! | TTGTCAATATTATTTGGCTA+GGG | + | chr1_3:39349467-39349486 | Msa0117710:intron | 25.0% |
| !!! | AATTGTGAAATCTTTTGAGA+AGG | + | chr1_3:39349502-39349521 | Msa0117710:CDS | 25.0% |
| !! | TGTAAGTAATGTGATCTTTT+TGG | + | chr1_3:39349582-39349601 | Msa0117710:intron | 25.0% |
| !!! | TAATGTGATCTTTTTGGTTT+TGG | + | chr1_3:39349588-39349607 | Msa0117710:intron | 25.0% |
| ! | TTTGATTATATTGTTCTGCA+GGG | + | chr1_3:39349893-39349912 | Msa0117710:intron | 25.0% |
| !! | TAATGTCAGATTAGAACTTT+TGG | + | chr1_3:39349919-39349938 | Msa0117710:CDS | 25.0% |
| ! | AAATAATTCAAAAGAGTTGC+AGG | - | chr1_3:39350128-39350147 | None:intergenic | 25.0% |
| ! | AATTCTTCGTTTGATATTGT+TGG | - | chr1_3:39350540-39350559 | None:intergenic | 25.0% |
| ! | ACAATATCAAACGAAGAATT+AGG | + | chr1_3:39350540-39350559 | Msa0117710:CDS | 25.0% |
| ! | AATGCAAAGTGATATTTCTT+TGG | + | chr1_3:39351123-39351142 | Msa0117710:CDS | 25.0% |
| ! | TATATAAAATCTGACATAGC+TGG | - | chr1_3:39351274-39351293 | None:intergenic | 25.0% |
| !! | AAAGTATAACTCACTTGTTT+TGG | - | chr1_3:39351464-39351483 | None:intergenic | 25.0% |
| !! | ATTTAAGATCTCAAAGTTGT+TGG | + | chr1_3:39351542-39351561 | Msa0117710:intron | 25.0% |
| !!! | GGTATCTAGTAATAGTTTTA+GGG | - | chr1_3:39351648-39351667 | None:intergenic | 25.0% |
| ! | TTTGGTATGGTTTATAAAAC+TGG | - | chr1_3:39351709-39351728 | None:intergenic | 25.0% |
| !!! | GTTCAAACTAATTTTGAGAT+TGG | - | chr1_3:39351795-39351814 | None:intergenic | 25.0% |
| !! | AAAATTAGTTTGAACCAGTA+AGG | + | chr1_3:39351800-39351819 | Msa0117710:intron | 25.0% |
| !!! | CAATGTTTTAAACACCAAAT+TGG | - | chr1_3:39352164-39352183 | None:intergenic | 25.0% |
| ! | ACAGAGATATAACAATAACA+GGG | + | chr1_3:39352294-39352313 | Msa0117710:intron | 25.0% |
| ! | TGAAAATAAATCACATGGTT+AGG | - | chr1_3:39352426-39352445 | None:intergenic | 25.0% |
| ! | TAAGAGAAATAGAGATAAAG+GGG | - | chr1_3:39352550-39352569 | None:intergenic | 25.0% |
| ! | TAGCTTCATTTATAACATGT+CGG | - | chr1_3:39353063-39353082 | None:intergenic | 25.0% |
| ! | GTTATAAATGAAGCTATTTG+TGG | + | chr1_3:39353067-39353086 | Msa0117710:three_prime_UTR | 25.0% |
| AAAAAGTGATGTCAATTGGA+AGG | - | chr1_3:39347946-39347965 | None:intergenic | 30.0% | |
| ! | TGTTATCTTTGAAGAATGGT+TGG | + | chr1_3:39348059-39348078 | Msa0117710:intron | 30.0% |
| AATTAAGGCACAAATTGCAA+AGG | + | chr1_3:39348128-39348147 | Msa0117710:CDS | 30.0% | |
| !! | TATTTGGATTAGTGTGTGTT+TGG | + | chr1_3:39348264-39348283 | Msa0117710:intron | 30.0% |
| !! | TACACGTCTAGAATCAATTT+TGG | + | chr1_3:39348636-39348655 | Msa0117710:intron | 30.0% |
| TTAATCTCGATGTGTATGTT+TGG | - | chr1_3:39348679-39348698 | None:intergenic | 30.0% | |
| ATCATTTCTAACTTGAAGCT+AGG | - | chr1_3:39348971-39348990 | None:intergenic | 30.0% | |
| !! | TGTATGTTTGGTTTCACTTT+TGG | - | chr1_3:39349078-39349097 | None:intergenic | 30.0% |
| !! | TTTAGGGATTGGTTATTTAG+AGG | + | chr1_3:39349309-39349328 | Msa0117710:intron | 30.0% |
| TATTCTCTTGAAGTCTACTA+CGG | + | chr1_3:39349348-39349367 | Msa0117710:CDS | 30.0% | |
| TATTATGAAGTCCTTATCAG+AGG | + | chr1_3:39349700-39349719 | Msa0117710:intron | 30.0% | |
| GTTTGATTATATTGTTCTGC+AGG | + | chr1_3:39349892-39349911 | Msa0117710:intron | 30.0% | |
| ATAATGATTGCAGAGATCTT+CGG | + | chr1_3:39350203-39350222 | Msa0117710:intron | 30.0% | |
| TCAACAGCAACATTTAAAGA+TGG | - | chr1_3:39350270-39350289 | None:intergenic | 30.0% | |
| !! | GACTCTGAGGTTATTAATAT+TGG | + | chr1_3:39350288-39350307 | Msa0117710:CDS | 30.0% |
| TGGAAAGTTCACAAATTGAT+TGG | + | chr1_3:39350397-39350416 | Msa0117710:CDS | 30.0% | |
| GGAAAGTTCACAAATTGATT+GGG | + | chr1_3:39350398-39350417 | Msa0117710:CDS | 30.0% | |
| ! | GAGGCATTAATGATTTCATA+TGG | - | chr1_3:39350471-39350490 | None:intergenic | 30.0% |
| CATATAATTTCCTATACCCT+TGG | + | chr1_3:39350816-39350835 | Msa0117710:intron | 30.0% | |
| ATCACTCATATGTTTATCGA+GGG | - | chr1_3:39350917-39350936 | None:intergenic | 30.0% | |
| TATCACTCATATGTTTATCG+AGG | - | chr1_3:39350918-39350937 | None:intergenic | 30.0% | |
| TAGTATGGACATAGAAGAAT+AGG | - | chr1_3:39350942-39350961 | None:intergenic | 30.0% | |
| CAATTTCATTGCTGACAAAT+AGG | + | chr1_3:39351146-39351165 | Msa0117710:CDS | 30.0% | |
| TTATGATTCTCAACTCCAAA+AGG | + | chr1_3:39351185-39351204 | Msa0117710:CDS | 30.0% | |
| ! | CTGTCTAGAAATCTGAAATT+TGG | - | chr1_3:39351329-39351348 | None:intergenic | 30.0% |
| AGAATTCGTTATCTTCATTG+TGG | + | chr1_3:39351438-39351457 | Msa0117710:CDS | 30.0% | |
| !!! | ATCTAGTAATAGTTTTAGGG+AGG | - | chr1_3:39351645-39351664 | None:intergenic | 30.0% |
| ! | CGGTATCTAGTAATAGTTTT+AGG | - | chr1_3:39351649-39351668 | None:intergenic | 30.0% |
| GTATGGTTTATAAAACTGGA+AGG | - | chr1_3:39351705-39351724 | None:intergenic | 30.0% | |
| !!! | AACTAATTTTGAGATTGGCT+GGG | - | chr1_3:39351790-39351809 | None:intergenic | 30.0% |
| !!! | AAACTAATTTTGAGATTGGC+TGG | - | chr1_3:39351791-39351810 | None:intergenic | 30.0% |
| GACAAGCTACAAAGATTTAT+AGG | + | chr1_3:39351928-39351947 | Msa0117710:intron | 30.0% | |
| CACAGAGATATAACAATAAC+AGG | + | chr1_3:39352293-39352312 | Msa0117710:intron | 30.0% | |
| AGATATAACAATAACAGGGT+AGG | + | chr1_3:39352298-39352317 | Msa0117710:intron | 30.0% | |
| GATATAACAATAACAGGGTA+GGG | + | chr1_3:39352299-39352318 | Msa0117710:intron | 30.0% | |
| AAGAGAAATAGAGATAAAGG+GGG | - | chr1_3:39352549-39352568 | None:intergenic | 30.0% | |
| !!! | AACAATGCTTTTTCTCTGTT+TGG | - | chr1_3:39352590-39352609 | None:intergenic | 30.0% |
| TTGTTCCATTCCATATGAAT+CGG | + | chr1_3:39352605-39352624 | Msa0117710:intron | 30.0% | |
| GAAGGCCAGTTAATATAATT+GGG | + | chr1_3:39352794-39352813 | Msa0117710:CDS | 30.0% | |
| AAGGCCAGTTAATATAATTG+GGG | + | chr1_3:39352795-39352814 | Msa0117710:CDS | 30.0% | |
| ATCTCCCCAATTATATTAAC+TGG | - | chr1_3:39352802-39352821 | None:intergenic | 30.0% | |
| TCTGTCTAATTCAAAAGAAC+AGG | - | chr1_3:39352992-39353011 | None:intergenic | 30.0% | |
| !!! | GAACTTGTACTTTTTTCCTT+TGG | + | chr1_3:39353010-39353029 | Msa0117710:three_prime_UTR | 30.0% |
| TTGATCTTGCAAGAAGATAT+TGG | + | chr1_3:39353119-39353138 | Msa0117710:three_prime_UTR | 30.0% | |
| !! | TGGTAATTTTGGAGGTGAAA+TGG | - | chr1_3:39347756-39347775 | None:intergenic | 35.0% |
| ! | CAGTCAAATGGTAATTTTGG+AGG | - | chr1_3:39347764-39347783 | None:intergenic | 35.0% |
| ! | GCTCAGTCAAATGGTAATTT+TGG | - | chr1_3:39347767-39347786 | None:intergenic | 35.0% |
| CAACTCAATTCAACAACTTC+TGG | - | chr1_3:39347805-39347824 | None:intergenic | 35.0% | |
| CGAGAAAAAGTGATGTCAAT+TGG | - | chr1_3:39347950-39347969 | None:intergenic | 35.0% | |
| !! | AAAGCGTTTTGCTGCAATTA+AGG | + | chr1_3:39348113-39348132 | Msa0117710:CDS | 35.0% |
| AGAACTCACTCAAACATGTT+TGG | - | chr1_3:39348617-39348636 | None:intergenic | 35.0% | |
| ! | AAAGTGAGTTGAATGGAAAG+TGG | + | chr1_3:39348886-39348905 | Msa0117710:intron | 35.0% |
| ! | AAGTGAGTTGAATGGAAAGT+GGG | + | chr1_3:39348887-39348906 | Msa0117710:intron | 35.0% |
| !! | TTAACTTGCGTGCATAAGAT+GGG | + | chr1_3:39349259-39349278 | Msa0117710:intron | 35.0% |
| GCATAAGATGGGATTAAATG+TGG | + | chr1_3:39349270-39349289 | Msa0117710:intron | 35.0% | |
| ACGGAAAGTAGGAACATATT+TGG | + | chr1_3:39349367-39349386 | Msa0117710:CDS | 35.0% | |
| AACATATTTGGTCGTCTTTC+AGG | + | chr1_3:39349379-39349398 | Msa0117710:CDS | 35.0% | |
| AAACAGTGACAACATTTCAC+TGG | + | chr1_3:39349991-39350010 | Msa0117710:CDS | 35.0% | |
| ACAGCAACATTTAAAGATGG+AGG | - | chr1_3:39350267-39350286 | None:intergenic | 35.0% | |
| CAGTGTTCATTCAAGTAACA+AGG | + | chr1_3:39350311-39350330 | Msa0117710:CDS | 35.0% | |
| AAATCCAGAAGAAAGCAATG+TGG | + | chr1_3:39350338-39350357 | Msa0117710:CDS | 35.0% | |
| TCACAAATTGATTGGGACAT+TGG | + | chr1_3:39350405-39350424 | Msa0117710:CDS | 35.0% | |
| TGAAATCATTAATGCCTCTG+AGG | + | chr1_3:39350473-39350492 | Msa0117710:CDS | 35.0% | |
| !! | AGTTGATGAAGAAGTCTGAA+TGG | - | chr1_3:39350499-39350518 | None:intergenic | 35.0% |
| TATGAGTGAAACCAAGAACT+TGG | - | chr1_3:39350800-39350819 | None:intergenic | 35.0% | |
| CATTGTCTCTATAGTATCAG+CGG | - | chr1_3:39351107-39351126 | None:intergenic | 35.0% | |
| ! | TGACATAGCTGGATTCTTTT+CGG | - | chr1_3:39351263-39351282 | None:intergenic | 35.0% |
| AGACAGACTAGTAAACTCTT+TGG | + | chr1_3:39351343-39351362 | Msa0117710:CDS | 35.0% | |
| !! | CATGAAGTCAAGTTGAAAGA+CGG | + | chr1_3:39351380-39351399 | Msa0117710:CDS | 35.0% |
| !! | ATGAAGTCAAGTTGAAAGAC+GGG | + | chr1_3:39351381-39351400 | Msa0117710:CDS | 35.0% |
| !!! | AATAGTTTTAGGGAGGTGTA+GGG | - | chr1_3:39351638-39351657 | None:intergenic | 35.0% |
| !!! | TAATAGTTTTAGGGAGGTGT+AGG | - | chr1_3:39351639-39351658 | None:intergenic | 35.0% |
| ! | TCTTTTTCCACGATAAAGTG+CGG | - | chr1_3:39351669-39351688 | None:intergenic | 35.0% |
| GTCTTAAATGAATTCCTGAC+TGG | - | chr1_3:39351761-39351780 | None:intergenic | 35.0% | |
| TGAGGTTCAATATGGTTGAA+CGG | - | chr1_3:39352113-39352132 | None:intergenic | 35.0% | |
| TATATAACATGCTTGAGAGC+TGG | + | chr1_3:39352265-39352284 | Msa0117710:intron | 35.0% | |
| ! | TAGTTGTCAACCGATTCATA+TGG | - | chr1_3:39352618-39352637 | None:intergenic | 35.0% |
| ! | TTTTAATGCTATTGCCCCTT+TGG | + | chr1_3:39352641-39352660 | Msa0117710:intron | 35.0% |
| TTTAATGCTATTGCCCCTTT+GGG | + | chr1_3:39352642-39352661 | Msa0117710:intron | 35.0% | |
| !!! | CTAAGTTTTGAGTGAATTGC+AGG | + | chr1_3:39352702-39352721 | Msa0117710:intron | 35.0% |
| ACACTTTCATCCATGTTTGA+TGG | + | chr1_3:39352772-39352791 | Msa0117710:CDS | 35.0% | |
| TTTCATCCATGTTTGATGGA+AGG | + | chr1_3:39352776-39352795 | Msa0117710:CDS | 35.0% | |
| GGAAGGCCAGTTAATATAAT+TGG | + | chr1_3:39352793-39352812 | Msa0117710:CDS | 35.0% | |
| ! | ATTGTATAGTCTTGAGCCAA+AGG | - | chr1_3:39353029-39353048 | None:intergenic | 35.0% |
| ATGAAGCTATTTGTGGTACT+TGG | + | chr1_3:39353074-39353093 | Msa0117710:three_prime_UTR | 35.0% | |
| TCTTCTTGCAAGATCAATGA+AGG | - | chr1_3:39353116-39353135 | None:intergenic | 35.0% | |
| TTCTTCTCTGCTCAGTCAAA+TGG | - | chr1_3:39347776-39347795 | None:intergenic | 40.0% | |
| !!! | GACATCACTTTTTCTCGTCT+CGG | + | chr1_3:39347953-39347972 | Msa0117710:CDS | 40.0% |
| ! | TTGAAGAATGGTTGGTCGAT+CGG | + | chr1_3:39348067-39348086 | Msa0117710:intron | 40.0% |
| !! | GGAAAAGAGTACCTTCTGAT+TGG | + | chr1_3:39348088-39348107 | Msa0117710:CDS | 40.0% |
| AAACGCTTTCTCCAATCAGA+AGG | - | chr1_3:39348102-39348121 | None:intergenic | 40.0% | |
| ! | GGAATTTTCTTCCCTTCCTA+AGG | + | chr1_3:39348149-39348168 | Msa0117710:CDS | 40.0% |
| AAAAGGGGATCAGAATCCTT+AGG | - | chr1_3:39348168-39348187 | None:intergenic | 40.0% | |
| ! | AGGGTCTAGGGTTTGAAAAA+GGG | - | chr1_3:39348184-39348203 | None:intergenic | 40.0% |
| AAACAAACCTTCAGGGTCTA+GGG | - | chr1_3:39348196-39348215 | None:intergenic | 40.0% | |
| AAAACAAACCTTCAGGGTCT+AGG | - | chr1_3:39348197-39348216 | None:intergenic | 40.0% | |
| !! | TGGATTAGTGTGTGTTTGGT+TGG | + | chr1_3:39348268-39348287 | Msa0117710:intron | 40.0% |
| AAGGTAAAGTGATTCGTGAC+TGG | + | chr1_3:39348462-39348481 | Msa0117710:intron | 40.0% | |
| AATGGAAAGTGGGATATGCT+TGG | + | chr1_3:39348897-39348916 | Msa0117710:intron | 40.0% | |
| !! | GTTAACTTGCGTGCATAAGA+TGG | + | chr1_3:39349258-39349277 | Msa0117710:intron | 40.0% |
| TGAAGTCTACTACGGAAAGT+AGG | + | chr1_3:39349356-39349375 | Msa0117710:CDS | 40.0% | |
| ! | TATTATTTGGCTAGGGTGCT+TGG | + | chr1_3:39349474-39349493 | Msa0117710:intron | 40.0% |
| ! | ATTATTTGGCTAGGGTGCTT+GGG | + | chr1_3:39349475-39349494 | Msa0117710:intron | 40.0% |
| ! | GAGAAGGATCATGTTTTCCT+TGG | + | chr1_3:39349518-39349537 | Msa0117710:CDS | 40.0% |
| AAGTCCTTATCAGAGGAAAC+AGG | + | chr1_3:39349707-39349726 | Msa0117710:intron | 40.0% | |
| !! | AAAAAGAAGTGCTGCACTCT+CGG | + | chr1_3:39349782-39349801 | Msa0117710:CDS | 40.0% |
| CTGACAAGCTTCAACGTATT+TGG | - | chr1_3:39349811-39349830 | None:intergenic | 40.0% | |
| CAAATACGTTGAAGCTTGTC+AGG | + | chr1_3:39349809-39349828 | Msa0117710:CDS | 40.0% | |
| TAGAGATGCTCACACTGAAA+AGG | + | chr1_3:39350039-39350058 | Msa0117710:CDS | 40.0% | |
| CTCACACTGAAAAGGATGTA+AGG | + | chr1_3:39350047-39350066 | Msa0117710:intron | 40.0% | |
| AAGCTGTACTGCAAAACTTG+AGG | + | chr1_3:39350226-39350245 | Msa0117710:CDS | 40.0% | |
| !! | AAATGTTGCTGTTGACTCTG+AGG | + | chr1_3:39350275-39350294 | Msa0117710:CDS | 40.0% |
| ACTTCCACATTGCTTTCTTC+TGG | - | chr1_3:39350345-39350364 | None:intergenic | 40.0% | |
| GAAATATCCCAGTCAATGTC+AGG | - | chr1_3:39350375-39350394 | None:intergenic | 40.0% | |
| ! | CATTGACTGGGATATTTCAG+TGG | + | chr1_3:39350377-39350396 | Msa0117710:CDS | 40.0% |
| ! | TGGAACTTTAGAAGAAACCG+AGG | + | chr1_3:39350425-39350444 | Msa0117710:CDS | 40.0% |
| TTAGAAGAAACCGAGGATAC+CGG | + | chr1_3:39350432-39350451 | Msa0117710:CDS | 40.0% | |
| TCAGACTTCTTCATCAACTG+AGG | + | chr1_3:39350500-39350519 | Msa0117710:CDS | 40.0% | |
| TCTTCATCAACTGAGGATGT+CGG | + | chr1_3:39350507-39350526 | Msa0117710:CDS | 40.0% | |
| CTCACATGCAGATATATGCT+GGG | + | chr1_3:39350563-39350582 | Msa0117710:CDS | 40.0% | |
| GTTCTCTGTCAACTGAGATA+AGG | - | chr1_3:39350679-39350698 | None:intergenic | 40.0% | |
| ATCTCAGTTGACAGAGAACA+AGG | + | chr1_3:39350680-39350699 | Msa0117710:CDS | 40.0% | |
| GATTCTCGATGATCTATACG+AGG | + | chr1_3:39350743-39350762 | Msa0117710:CDS | 40.0% | |
| AACCAAGAACTTGGCAGAAT+AGG | - | chr1_3:39350791-39350810 | None:intergenic | 40.0% | |
| AATTTCCTATACCCTTGGAC+AGG | + | chr1_3:39350821-39350840 | Msa0117710:intron | 40.0% | |
| CTCATATGTTTATCGAGGGT+GGG | - | chr1_3:39350913-39350932 | None:intergenic | 40.0% | |
| ACTCATATGTTTATCGAGGG+TGG | - | chr1_3:39350914-39350933 | None:intergenic | 40.0% | |
| GTTAGCTGAATTGAAGAACG+AGG | + | chr1_3:39351021-39351040 | Msa0117710:CDS | 40.0% | |
| GTCGCTACAAAATCAAGTAC+AGG | + | chr1_3:39351051-39351070 | Msa0117710:CDS | 40.0% | |
| GCTACAAAATCAAGTACAGG+CGG | + | chr1_3:39351054-39351073 | Msa0117710:CDS | 40.0% | |
| CAGACTAGTAAACTCTTTGG+AGG | + | chr1_3:39351346-39351365 | Msa0117710:CDS | 40.0% | |
| TTGTGTGCTCGTTCAATGTT+AGG | + | chr1_3:39351483-39351502 | Msa0117710:intron | 40.0% | |
| TGTGTGCTCGTTCAATGTTA+GGG | + | chr1_3:39351484-39351503 | Msa0117710:intron | 40.0% | |
| GTTCAACTAGTCAAACTGGA+CGG | - | chr1_3:39351732-39351751 | None:intergenic | 40.0% | |
| ! | ATGAATTCCTGACTGGTTCA+CGG | - | chr1_3:39351754-39351773 | None:intergenic | 40.0% |
| ! | TTTGAGATTGGCTGGGATAT+TGG | - | chr1_3:39351783-39351802 | None:intergenic | 40.0% |
| AGTTTGAACCAGTAAGGAAC+TGG | + | chr1_3:39351806-39351825 | Msa0117710:intron | 40.0% | |
| ! | TGGTCTGCCTAGTTTAAAAC+CGG | + | chr1_3:39351826-39351845 | Msa0117710:intron | 40.0% |
| !!! | CTAACCACCGGTTTTAAACT+AGG | - | chr1_3:39351836-39351855 | None:intergenic | 40.0% |
| TTAAAACCGGTGGTTAGAAG+TGG | + | chr1_3:39351839-39351858 | Msa0117710:intron | 40.0% | |
| TTCAAACCACTTCTAACCAC+CGG | - | chr1_3:39351848-39351867 | None:intergenic | 40.0% | |
| CTGAAGCTTGAGGTTCAATA+TGG | - | chr1_3:39352121-39352140 | None:intergenic | 40.0% | |
| ! | CACCAAATTGGTAATTGAGC+CGG | - | chr1_3:39352152-39352171 | None:intergenic | 40.0% |
| ATAACAATAACAGGGTAGGG+TGG | + | chr1_3:39352302-39352321 | Msa0117710:intron | 40.0% | |
| ! | GTCAACCGATTCATATGGAA+TGG | - | chr1_3:39352613-39352632 | None:intergenic | 40.0% |
| TTTGAGTGAATTGCAGGATG+CGG | + | chr1_3:39352708-39352727 | Msa0117710:intron | 40.0% | |
| ATCAATACTCTGTTGACCAG+TGG | + | chr1_3:39352820-39352839 | Msa0117710:CDS | 40.0% | |
| AAAGGCTTCATCACTATCAG+AGG | - | chr1_3:39352884-39352903 | None:intergenic | 40.0% | |
| !! | CTGATAGTGATGAAGCCTTT+TGG | + | chr1_3:39352884-39352903 | Msa0117710:three_prime_UTR | 40.0% |
| ! | ATAGTGATGAAGCCTTTTGG+TGG | + | chr1_3:39352887-39352906 | Msa0117710:three_prime_UTR | 40.0% |
| TGGAAGGTTGCGAATATCGT+CGG | - | chr1_3:39347930-39347949 | None:intergenic | 45.0% | |
| !!! | ATCACTTTTTCTCGTCTCGG+AGG | + | chr1_3:39347956-39347975 | Msa0117710:CDS | 45.0% |
| GGGATCAGAATCCTTAGGAA+GGG | - | chr1_3:39348163-39348182 | None:intergenic | 45.0% | |
| ! | GGGTCTAGGGTTTGAAAAAG+GGG | - | chr1_3:39348183-39348202 | None:intergenic | 45.0% |
| ! | CAGGGTCTAGGGTTTGAAAA+AGG | - | chr1_3:39348185-39348204 | None:intergenic | 45.0% |
| TTTCAAACCCTAGACCCTGA+AGG | + | chr1_3:39348186-39348205 | Msa0117710:CDS | 45.0% | |
| TGCACCTGTTTCCTCTGATA+AGG | - | chr1_3:39349714-39349733 | None:intergenic | 45.0% | |
| ! | CCTACAGGTTGGGATTTAGA+CGG | + | chr1_3:39349839-39349858 | Msa0117710:intron | 45.0% |
| AAGATCCTGCTAAACGTGCT+TGG | - | chr1_3:39349962-39349981 | None:intergenic | 45.0% | |
| AAGCACGTTTAGCAGGATCT+TGG | + | chr1_3:39349961-39349980 | Msa0117710:CDS | 45.0% | |
| ATATGGACCCAAGCCATTAC+CGG | - | chr1_3:39350454-39350473 | None:intergenic | 45.0% | |
| GCTCACATGCAGATATATGC+TGG | + | chr1_3:39350562-39350581 | Msa0117710:CDS | 45.0% | |
| GAATGCATCAAATGCCGTAC+TGG | + | chr1_3:39350629-39350648 | Msa0117710:CDS | 45.0% | |
| ! | AGAAGACTGGTTGTCCAGTA+CGG | - | chr1_3:39350646-39350665 | None:intergenic | 45.0% |
| ! | GTCAACTGAGATAAGGCATC+TGG | - | chr1_3:39350672-39350691 | None:intergenic | 45.0% |
| CAGTTGACAGAGAACAAGGA+AGG | + | chr1_3:39350684-39350703 | Msa0117710:CDS | 45.0% | |
| TGACAGAGAACAAGGAAGGA+AGG | + | chr1_3:39350688-39350707 | Msa0117710:CDS | 45.0% | |
| ! | AAGGAGCCAGCTTTTAGACA+CGG | + | chr1_3:39350707-39350726 | Msa0117710:CDS | 45.0% |
| TGTACTCCGTGTCTAAAAGC+TGG | - | chr1_3:39350716-39350735 | None:intergenic | 45.0% | |
| CAAGAACTTGGCAGAATAGG+AGG | - | chr1_3:39350788-39350807 | None:intergenic | 45.0% | |
| CTCCTATTCTGCCAAGTTCT+TGG | + | chr1_3:39350786-39350805 | Msa0117710:intron | 45.0% | |
| GTTTCTTTCTGCCTGTCCAA+GGG | - | chr1_3:39350835-39350854 | None:intergenic | 45.0% | |
| TGTTTCTTTCTGCCTGTCCA+AGG | - | chr1_3:39350836-39350855 | None:intergenic | 45.0% | |
| GCATACTGCTGTAGTACGAA+GGG | - | chr1_3:39351085-39351104 | None:intergenic | 45.0% | |
| !! | CAAGTTGAAAGACGGGTTGA+AGG | + | chr1_3:39351388-39351407 | Msa0117710:CDS | 45.0% |
| GTGTGCTCGTTCAATGTTAG+GGG | + | chr1_3:39351485-39351504 | Msa0117710:intron | 45.0% | |
| GAATGGAAGGAAGAGAGACA+AGG | - | chr1_3:39351574-39351593 | None:intergenic | 45.0% | |
| CTAGATACCGCACTTTATCG+TGG | + | chr1_3:39351659-39351678 | Msa0117710:intron | 45.0% | |
| !! | TCAAACTGGACGGTTTGGTA+TGG | - | chr1_3:39351722-39351741 | None:intergenic | 45.0% |
| ACTAGTCAAACTGGACGGTT+TGG | - | chr1_3:39351727-39351746 | None:intergenic | 45.0% | |
| CACGGTTCAACTAGTCAAAC+TGG | - | chr1_3:39351736-39351755 | None:intergenic | 45.0% | |
| ! | TCTGCCTAGTTTAAAACCGG+TGG | + | chr1_3:39351829-39351848 | Msa0117710:intron | 45.0% |
| TCAAGCTTCAGTACCTTCAC+CGG | + | chr1_3:39352130-39352149 | Msa0117710:intron | 45.0% | |
| ! | ATTGGTAATTGAGCCGGTGA+AGG | - | chr1_3:39352146-39352165 | None:intergenic | 45.0% |
| !! | CACCGGCTCAATTACCAATT+TGG | + | chr1_3:39352147-39352166 | Msa0117710:intron | 45.0% |
| TAACATGCTTGAGAGCTGGA+AGG | + | chr1_3:39352269-39352288 | Msa0117710:intron | 45.0% | |
| TGTGAGTGAGAACTACTCTG+GGG | - | chr1_3:39352340-39352359 | None:intergenic | 45.0% | |
| CTGTGAGTGAGAACTACTCT+GGG | - | chr1_3:39352341-39352360 | None:intergenic | 45.0% | |
| TGCGGCTGTGACAAAAACAA+AGG | + | chr1_3:39352726-39352745 | Msa0117710:CDS | 45.0% | |
| !! | AACTGGCCTTCCATCAAACA+TGG | - | chr1_3:39352785-39352804 | None:intergenic | 45.0% |
| TGCAGTCACTATCCACCAAA+AGG | - | chr1_3:39352902-39352921 | None:intergenic | 45.0% | |
| GGAAGGTTGCGAATATCGTC+GGG | - | chr1_3:39347929-39347948 | None:intergenic | 50.0% | |
| GGGGATCAGAATCCTTAGGA+AGG | - | chr1_3:39348164-39348183 | None:intergenic | 50.0% | |
| TCGGACTAAGCGTGTGTTGA+AGG | + | chr1_3:39348443-39348462 | Msa0117710:intron | 50.0% | |
| !! | TGGTCGTCTTTCAGGTTCTG+CGG | + | chr1_3:39349387-39349406 | Msa0117710:CDS | 50.0% |
| ! | GGATCATGTTTTCCTTGGCG+AGG | + | chr1_3:39349523-39349542 | Msa0117710:CDS | 50.0% |
| TAATAAGTGCAGCCTCGCCA+AGG | - | chr1_3:39349538-39349557 | None:intergenic | 50.0% | |
| GTTGAAGCTTGTCAGGAGCT+TGG | + | chr1_3:39349816-39349835 | Msa0117710:CDS | 50.0% | |
| CCGTCTAAATCCCAACCTGT+AGG | - | chr1_3:39349842-39349861 | None:intergenic | 50.0% | |
| CACTTCCAAGCACGTTTAGC+AGG | + | chr1_3:39349954-39349973 | Msa0117710:CDS | 50.0% | |
| TTGCTGCTCCTGACATTGAC+TGG | + | chr1_3:39350364-39350383 | Msa0117710:CDS | 50.0% | |
| ! | TGCTGCTCCTGACATTGACT+GGG | + | chr1_3:39350365-39350384 | Msa0117710:CDS | 50.0% |
| GAAACCGAGGATACCGGTAA+TGG | + | chr1_3:39350438-39350457 | Msa0117710:CDS | 50.0% | |
| CAAGCCATTACCGGTATCCT+CGG | - | chr1_3:39350445-39350464 | None:intergenic | 50.0% | |
| ! | GAGGATACCGGTAATGGCTT+GGG | + | chr1_3:39350444-39350463 | Msa0117710:CDS | 50.0% |
| AGAAGTCTGAATGGCCTCAG+AGG | - | chr1_3:39350490-39350509 | None:intergenic | 50.0% | |
| AGGCATCTGGAAGAGAAGAC+TGG | - | chr1_3:39350659-39350678 | None:intergenic | 50.0% | |
| ! | TTCTGCCTGTCCAAGGGTAT+AGG | - | chr1_3:39350829-39350848 | None:intergenic | 50.0% |
| GGCATACTGCTGTAGTACGA+AGG | - | chr1_3:39351086-39351105 | None:intergenic | 50.0% | |
| !! | GAAAGACGGGTTGAAGGACT+TGG | + | chr1_3:39351394-39351413 | Msa0117710:CDS | 50.0% |
| AGTTGAACCGTGAACCAGTC+AGG | + | chr1_3:39351744-39351763 | Msa0117710:intron | 50.0% | |
| TAGGCAGACCAGTTCCTTAC+TGG | - | chr1_3:39351817-39351836 | None:intergenic | 50.0% | |
| !! | GGTGAAGGTACTGAAGCTTG+AGG | - | chr1_3:39352131-39352150 | None:intergenic | 50.0% |
| GCTGTGAGTGAGAACTACTC+TGG | - | chr1_3:39352342-39352361 | None:intergenic | 50.0% | |
| AGCCAGTGAAAGAGCCCAAA+GGG | - | chr1_3:39352659-39352678 | None:intergenic | 50.0% | |
| AAGCCAGTGAAAGAGCCCAA+AGG | - | chr1_3:39352660-39352679 | None:intergenic | 50.0% | |
| ACTCTGTTGACCAGTGGTCT+TGG | + | chr1_3:39352826-39352845 | Msa0117710:CDS | 50.0% | |
| TCATCATGCTCCAAGACCAC+TGG | - | chr1_3:39352839-39352858 | None:intergenic | 50.0% | |
| GCTTGCAGAACTCGATCGCA+AGG | + | chr1_3:39349749-39349768 | Msa0117710:CDS | 55.0% | |
| TGCAGAACTCGATCGCAAGG+AGG | + | chr1_3:39349752-39349771 | Msa0117710:CDS | 55.0% | |
| TTGTCAGGAGCTTGGCCTAC+AGG | + | chr1_3:39349824-39349843 | Msa0117710:CDS | 55.0% | |
| AGGAGCTTGGCCTACAGGTT+GGG | + | chr1_3:39349829-39349848 | Msa0117710:intron | 55.0% | |
| ! | CGAGGATACCGGTAATGGCT+TGG | + | chr1_3:39350443-39350462 | Msa0117710:CDS | 55.0% |
| GGACTTGGCTACTAAGCGCA+TGG | + | chr1_3:39351409-39351428 | Msa0117710:CDS | 55.0% | |
| GCCAGTGAAAGAGCCCAAAG+GGG | - | chr1_3:39352658-39352677 | None:intergenic | 55.0% | |
| CAGGAGCTTGGCCTACAGGT+TGG | + | chr1_3:39349828-39349847 | Msa0117710:intron | 60.0% | |
| GCCCCTTTGGGCTCTTTCAC+TGG | + | chr1_3:39352654-39352673 | Msa0117710:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 39347745 | 39353155 | 39347745 | ID=Msa0117710;Name=Msa0117710 |
| chr1_3 | mRNA | 39347745 | 39353155 | 39347745 | ID=Msa0117710-mRNA-1;Parent=Msa0117710;Name=Msa0117710-mRNA-1;_AED=0.02;_eAED=0.02;_QI=172|1|1|1|1|1|10|300|564 |
| chr1_3 | exon | 39347745 | 39347977 | 39347745 | ID=Msa0117710-mRNA-1:exon:12132;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39348073 | 39348207 | 39348073 | ID=Msa0117710-mRNA-1:exon:12133;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39349314 | 39349408 | 39349314 | ID=Msa0117710-mRNA-1:exon:12134;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39349488 | 39349582 | 39349488 | ID=Msa0117710-mRNA-1:exon:12135;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39349710 | 39349845 | 39349710 | ID=Msa0117710-mRNA-1:exon:12136;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39349914 | 39350063 | 39349914 | ID=Msa0117710-mRNA-1:exon:12137;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39350216 | 39350764 | 39350216 | ID=Msa0117710-mRNA-1:exon:12138;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39350998 | 39351206 | 39350998 | ID=Msa0117710-mRNA-1:exon:12139;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39351337 | 39351469 | 39351337 | ID=Msa0117710-mRNA-1:exon:12140;Parent=Msa0117710-mRNA-1 |
| chr1_3 | exon | 39352724 | 39353155 | 39352724 | ID=Msa0117710-mRNA-1:exon:12141;Parent=Msa0117710-mRNA-1 |
| chr1_3 | five_prime_UTR | 39347745 | 39347916 | 39347745 | ID=Msa0117710-mRNA-1:five_prime_utr;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39347917 | 39347977 | 39347917 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39348073 | 39348207 | 39348073 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39349314 | 39349408 | 39349314 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39349488 | 39349582 | 39349488 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39349710 | 39349845 | 39349710 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39349914 | 39350063 | 39349914 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39350216 | 39350764 | 39350216 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39350998 | 39351206 | 39350998 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39351337 | 39351469 | 39351337 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | CDS | 39352724 | 39352855 | 39352724 | ID=Msa0117710-mRNA-1:cds;Parent=Msa0117710-mRNA-1 |
| chr1_3 | three_prime_UTR | 39352856 | 39353155 | 39352856 | ID=Msa0117710-mRNA-1:three_prime_utr;Parent=Msa0117710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
