AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322100 MtrunA17_Chr8g0354241 85.987 157 8 1 1 143 1 157 7.76e-92 271
Msa1322100 MtrunA17_Chr8g0354261 85.350 157 9 1 1 143 1 157 9.50e-91 268
Msa1322100 MtrunA17_Chr2g0311831 50.323 155 65 3 1 143 1 155 3.27e-41 140
Msa1322100 MtrunA17_Chr2g0311701 48.551 138 58 3 16 140 16 153 3.69e-41 140
Msa1322100 MtrunA17_Chr2g0311761 49.677 155 66 3 1 143 1 155 1.27e-40 139
Msa1322100 MtrunA17_Chr7g0247991 44.667 150 72 2 1 139 1 150 1.71e-40 139
Msa1322100 MtrunA17_Chr8g0336751 48.322 149 65 2 8 144 34 182 1.72e-40 139
Msa1322100 MtrunA17_Chr2g0311711 50.365 137 55 4 16 139 14 150 1.07e-38 134
Msa1322100 MtrunA17_Chr1g0184241 47.826 138 62 2 17 144 18 155 3.12e-38 132
Msa1322100 MtrunA17_Chr8g0364161 43.243 148 71 3 3 139 5 150 7.76e-38 127
Msa1322100 MtrunA17_Chr8g0336781 51.515 132 54 2 22 143 52 183 1.38e-36 129
Msa1322100 MtrunA17_Chr8g0336791 50.000 132 56 2 22 143 17 148 2.29e-36 123
Msa1322100 MtrunA17_Chr2g0311681 46.763 139 61 3 13 138 7 145 2.40e-36 128
Msa1322100 MtrunA17_Chr8g0348081 52.273 132 53 2 22 143 17 148 4.35e-36 127
Msa1322100 MtrunA17_Chr8g0336831 50.000 132 56 2 22 143 17 148 6.40e-36 124
Msa1322100 MtrunA17_Chr1g0167951 48.571 140 55 4 18 144 5 140 1.58e-35 125
Msa1322100 MtrunA17_Chr8g0335411 41.333 150 77 2 1 139 1 150 1.73e-35 125
Msa1322100 MtrunA17_Chr8g0336851 50.000 128 54 2 26 143 21 148 1.97e-35 125
Msa1322100 MtrunA17_Chr8g0336861 51.515 132 54 2 22 143 17 148 2.24e-35 125
Msa1322100 MtrunA17_Chr7g0235951 40.385 156 80 2 1 144 1 155 2.96e-35 125
Msa1322100 MtrunA17_Chr2g0311921 47.826 138 60 2 18 143 4 141 8.91e-35 123
Msa1322100 MtrunA17_Chr2g0311691 43.165 139 66 2 13 138 7 145 1.12e-34 123
Msa1322100 MtrunA17_Chr8g0354251 86.567 67 9 0 1 67 31 97 1.36e-34 119
Msa1322100 MtrunA17_Chr4g0055591 44.961 129 63 1 19 139 11 139 1.49e-34 123
Msa1322100 MtrunA17_Chr8g0336761 50.000 132 56 2 22 143 17 148 2.07e-34 122
Msa1322100 MtrunA17_Chr1g0168001 47.552 143 58 4 18 144 5 146 2.15e-34 118
Msa1322100 MtrunA17_Chr4g0011311 43.066 137 67 2 14 139 14 150 2.51e-34 121
Msa1322100 MtrunA17_Chr8g0364471 43.704 135 65 2 16 139 16 150 3.70e-34 122
Msa1322100 MtrunA17_Chr1g0187821 40.789 152 75 4 8 144 4 155 7.99e-34 121
Msa1322100 MtrunA17_Chr1g0187811 39.623 159 76 2 6 144 118 276 1.68e-33 122
Msa1322100 MtrunA17_Chr8g0336631 50.376 133 55 3 22 143 17 149 5.59e-33 119
Msa1322100 MtrunA17_Chr7g0236011 40.645 155 81 2 1 144 1 155 1.24e-32 118
Msa1322100 MtrunA17_Chr1g0167961 50.758 132 53 4 18 138 20 150 1.49e-32 118
Msa1322100 MtrunA17_Chr1g0167911 44.928 138 64 2 18 144 5 141 1.45e-31 115
Msa1322100 MtrunA17_Chr4g0066991 38.312 154 76 3 1 142 1 147 2.66e-30 112
Msa1322100 MtrunA17_Chr1g0187831 41.429 140 65 4 17 139 14 153 7.25e-30 111
Msa1322100 MtrunA17_Chr8g0362741 41.727 139 72 3 3 139 5 136 3.50e-29 107
Msa1322100 MtrunA17_Chr6g0472861 41.844 141 64 3 17 139 12 152 1.05e-28 107
Msa1322100 MtrunA17_Chr7g0225881 41.176 136 67 2 17 139 12 147 6.23e-28 105
Msa1322100 MtrunA17_Chr2g0311861 43.750 144 45 3 14 143 10 131 8.61e-27 102
Msa1322100 MtrunA17_Chr7g0266651 41.007 139 71 3 17 144 8 146 2.36e-26 101
Msa1322100 MtrunA17_Chr4g0066121 43.548 124 60 2 22 135 17 140 5.87e-26 100
Msa1322100 MtrunA17_Chr2g0311751 54.167 72 33 0 73 144 44 115 1.59e-25 95.1
Msa1322100 MtrunA17_Chr2g0311741 55.405 74 33 0 71 144 42 115 1.87e-23 93.2
Msa1322100 MtrunA17_Chr1g0161081 34.058 138 81 2 17 144 21 158 4.13e-23 92.8
Msa1322100 MtrunA17_Chr1g0161111 34.058 138 81 2 17 144 80 217 3.30e-22 90.9
Msa1322100 MtrunA17_Chr1g0161041 32.215 149 91 2 1 139 28 176 4.83e-22 90.1
Msa1322100 MtrunA17_Chr1g0167931 48.039 102 42 3 18 108 5 106 6.83e-22 89.0
Msa1322100 MtrunA17_Chr7g0235991 42.466 73 42 0 67 139 32 104 1.23e-16 72.8
Msa1322100 MtrunA17_Chr2g0311641 34.483 116 63 5 32 136 21 134 3.02e-13 63.2
Msa1322100 MtrunA17_Chr2g0311821 48.571 70 34 1 71 138 22 91 4.56e-13 62.0
Msa1322100 MtrunA17_Chr2g0311621 36.458 96 51 3 32 118 21 115 5.44e-13 61.6
Msa1322100 MtrunA17_Chr2g0311631 36.190 105 56 4 32 127 21 123 2.91e-12 62.8
Msa1322100 MtrunA17_Chr1g0179801 30.000 120 70 2 31 136 25 144 5.57e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322100 AT2G30830.1 50.360 139 58 1 17 144 5 143 6.05e-41 140
Msa1322100 AT1G06620.2 47.482 139 61 1 18 144 12 150 4.99e-40 135
Msa1322100 AT1G06620.1 47.482 139 61 1 18 144 12 150 3.55e-39 135
Msa1322100 AT1G06645.1 45.139 144 63 2 17 144 23 166 6.99e-38 132
Msa1322100 AT2G25450.1 46.763 139 63 1 17 144 5 143 3.02e-37 130
Msa1322100 AT5G59540.2 48.905 137 56 3 17 139 9 145 3.09e-36 126
Msa1322100 AT5G59540.1 48.905 137 56 3 17 139 9 145 1.32e-35 126
Msa1322100 AT5G59530.1 49.265 136 56 4 17 139 8 143 7.10e-35 124
Msa1322100 AT2G30840.2 42.466 146 69 2 14 144 2 147 1.80e-34 122
Msa1322100 AT1G06650.1 42.069 145 68 2 16 144 9 153 1.88e-34 122
Msa1322100 AT2G30840.3 42.466 146 69 2 14 144 2 147 3.87e-34 122
Msa1322100 AT2G30840.1 42.466 146 69 2 14 144 2 147 4.20e-34 122
Msa1322100 AT1G06650.2 42.069 145 68 2 16 144 9 153 5.48e-34 122
Msa1322100 AT1G06640.3 43.056 144 66 2 17 144 10 153 7.16e-34 120
Msa1322100 AT1G06640.2 43.056 144 66 2 17 144 10 153 1.52e-33 120
Msa1322100 AT1G06640.1 43.056 144 66 2 17 144 10 153 3.56e-33 120
Msa1322100 AT1G04350.1 44.776 134 62 2 17 139 6 138 1.79e-32 118
Msa1322100 AT5G43440.2 44.604 139 62 3 19 142 10 148 6.37e-32 115
Msa1322100 AT5G43440.1 44.604 139 62 3 19 142 10 148 2.94e-31 115
Msa1322100 AT1G03410.2 43.478 138 64 2 18 141 5 142 1.28e-29 110
Msa1322100 AT1G03410.1 43.478 138 64 2 18 141 42 179 2.19e-29 110
Msa1322100 AT3G61400.2 39.007 141 69 1 18 141 10 150 5.61e-29 107
Msa1322100 AT5G43450.2 42.537 134 65 1 18 139 9 142 1.02e-28 106
Msa1322100 AT3G61400.1 39.007 141 69 1 18 141 10 150 1.41e-28 107
Msa1322100 AT5G43450.1 42.537 134 65 1 18 139 9 142 3.46e-28 106
Msa1322100 AT1G03400.1 41.791 134 57 2 18 138 5 130 3.84e-28 106
Msa1322100 AT1G03400.2 41.791 134 57 2 18 138 5 130 9.00e-28 105
Msa1322100 AT1G04380.2 54.054 74 34 0 70 143 56 129 5.42e-24 94.0
Msa1322100 AT1G04380.1 54.054 74 34 0 70 143 56 129 1.97e-23 94.0
Msa1322100 AT3G13610.1 30.088 113 71 2 32 136 26 138 1.45e-11 61.2
Msa1322100 AT3G12900.1 31.624 117 66 5 32 136 21 135 5.91e-11 59.3
Msa1322100 AT2G36690.2 31.707 123 69 3 30 137 18 140 8.83e-11 58.9
Msa1322100 AT2G36690.1 31.707 123 69 3 30 137 18 140 8.83e-11 58.9
Msa1322100 AT5G24530.1 35.526 76 49 0 63 138 40 115 9.98e-11 58.5

Find 109 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCACAATCTATGTCTTTA+AGG 0.081758 8_4:+28679418 None:intergenic
AATGAAAATCTTTGGGATTT+TGG 0.093236 8_4:+28680248 None:intergenic
AATGAAAATCTTTGGGATTT+TGG 0.093236 8_4:+28686390 None:intergenic
AGTATTCCAATCATAGATTT+TGG 0.160716 8_4:-28680174 Msa1322100:three_prime_UTR
GGTCTTGTTTGATTTCTTCT+AGG 0.164656 8_4:+28686500 None:intergenic
TACAAAGAAACATCGGTTAA+AGG 0.247280 8_4:-28678538 Msa1322100:three_prime_UTR
TTATCATGAATGAAAATCTT+TGG 0.254083 8_4:+28680240 None:intergenic
TTATCATGAATGAAAATCTT+TGG 0.254083 8_4:+28686382 None:intergenic
GGATACCCTTTATTGTGTTA+TGG 0.262133 8_4:-28679890 Msa1322100:three_prime_UTR
ATCTATGTCTTTAAGGTAAC+TGG 0.267302 8_4:+28679425 None:intergenic
GTGGGTAATAATGGGAAATT+AGG 0.268799 8_4:+28679385 None:intergenic
CAGGGCAAGGTGGGTAATAA+TGG 0.272425 8_4:+28679376 None:intergenic
ATGTTACTCCTGCTGTTAAT+TGG 0.273315 8_4:-28679915 Msa1322100:three_prime_UTR
GATACCCTTTATTGTGTTAT+GGG 0.282990 8_4:-28679889 Msa1322100:three_prime_UTR
CCTGAGCCAGAACTCACTTT+TGG 0.284501 8_4:-28679357 Msa1322100:three_prime_UTR
TGGTATTCCATCTACTGTTT+TGG 0.311454 8_4:-28680052 Msa1322100:three_prime_UTR
TGGTATTCCATCTACTGTTT+TGG 0.311454 8_4:-28686194 Msa1322100:CDS
AGCAAGAAGAATGAATAAAT+TGG 0.323962 8_4:-28678441 Msa1322100:three_prime_UTR
GAATCAAAAGAAGGTGTAAA+AGG 0.327860 8_4:-28680291 Msa1322100:three_prime_UTR
GAATCAAAAGAAGGTGTAAA+AGG 0.327860 8_4:-28686433 Msa1322100:CDS
GTCTATCATAAACATGTTCA+TGG 0.328367 8_4:+28680337 None:intergenic
ACTAGATCACTTCAGAATTT+AGG 0.338717 8_4:-28678470 Msa1322100:three_prime_UTR
AGTAACATACAAATCAAAAT+TGG 0.339968 8_4:+28686072 None:intergenic
AGTAACATAGAAATCAAAAT+TGG 0.343550 8_4:+28679930 None:intergenic
TATCATGAATGAAAATCTTT+GGG 0.353814 8_4:+28680241 None:intergenic
TATCATGAATGAAAATCTTT+GGG 0.353814 8_4:+28686383 None:intergenic
TGGCACTTTGGTCGTTAACT+TGG 0.356403 8_4:-28679226 Msa1322100:three_prime_UTR
ACAGATGAGATATCTGTCTT+TGG 0.360127 8_4:+28680424 None:intergenic
ATCTCATCCAAAACAGTAGA+TGG 0.362132 8_4:+28680045 None:intergenic
GTTTGTAAACTCTCCAATCT+TGG 0.362474 8_4:-28678362 Msa1322100:three_prime_UTR
ACCGATGTTTCTTTGTAAAC+AGG 0.364593 8_4:+28678544 None:intergenic
GTCGATCATAAACATGTTCA+TGG 0.366079 8_4:+28686479 None:intergenic
AGGATCTGCCTACAGTTTGC+AGG 0.378901 8_4:-28679846 Msa1322100:intron
GAATCTGTGTTGGTAAATAA+AGG 0.383395 8_4:+28680150 None:intergenic
ATTTCATCCAAAACAGTAGA+TGG 0.385467 8_4:+28686187 None:intergenic
TACTATGGAAAAGGACTAGA+TGG 0.389121 8_4:-28678502 Msa1322100:three_prime_UTR
TTGTAAACAGGAGGATTCTC+TGG 0.390320 8_4:+28678556 None:intergenic
TCCTCAGCCTCTTGATCCTC+AGG 0.392096 8_4:-28679866 Msa1322100:three_prime_UTR
GAGGACCCATAACACAATAA+AGG 0.399663 8_4:+28679884 None:intergenic
GGCTTGGTCTCACACTACTA+TGG 0.403045 8_4:-28678517 Msa1322100:three_prime_UTR
GTTGATGTCACACCAATTCC+TGG 0.405580 8_4:-28679246 Msa1322100:three_prime_UTR
TATGATTGGAATACTAAGAT+TGG 0.407758 8_4:+28680182 None:intergenic
GAATGAATAAATTGGCTGAT+AGG 0.414245 8_4:-28678433 Msa1322100:three_prime_UTR
CAGACTCATAAGACCAAGAT+TGG 0.414572 8_4:+28678349 None:intergenic
GAATTGCTTTCTGAAGCATT+AGG 0.422941 8_4:-28679456 Msa1322100:three_prime_UTR
ACGACCAAAGTGCCAGGAAT+TGG 0.431573 8_4:+28679234 None:intergenic
AAAGTATGCAAGTGAAAAGT+GGG 0.436185 8_4:-28686239 Msa1322100:CDS
AGATGATTGATGGAGTGATT+AGG 0.441001 8_4:-28680026 Msa1322100:three_prime_UTR
AAAGGTCCAAAATCTATGAT+TGG 0.446667 8_4:+28680168 None:intergenic
ACTTTAGTCTACATAAACTT+TGG 0.448458 8_4:+28678260 None:intergenic
AGGACCCATAACACAATAAA+GGG 0.450071 8_4:+28679885 None:intergenic
GGAATGTAAATTTGCTTGAA+AGG 0.459312 8_4:-28678412 Msa1322100:three_prime_UTR
CACACCAATTCCTGGCACTT+TGG 0.462077 8_4:-28679238 Msa1322100:three_prime_UTR
AGGGCAAGGTGGGTAATAAT+GGG 0.468240 8_4:+28679377 None:intergenic
AAGCATGCTACTGAAACTCT+TGG 0.469925 8_4:+28678643 None:intergenic
GTCTCACACTACTATGGAAA+AGG 0.471283 8_4:-28678511 Msa1322100:three_prime_UTR
TAAAGTATGCAAGTGAAAAG+TGG 0.476703 8_4:-28686240 Msa1322100:CDS
CTTACGCCAAAAGTGAGTTC+TGG 0.478639 8_4:+28679351 None:intergenic
TTCTCTGGTGTGAGCAACTC+AGG 0.479143 8_4:+28678571 None:intergenic
AAGCGCTCAACACAGAGTTC+TGG 0.481446 8_4:-28678680 Msa1322100:three_prime_UTR
GGCACTTTGGTCGTTAACTT+GGG 0.491792 8_4:-28679225 Msa1322100:three_prime_UTR
GTAAAAGGACTTGTAGATGC+TGG 0.501871 8_4:-28680276 Msa1322100:three_prime_UTR
GTAAAAGGACTTGTAGATGC+TGG 0.501871 8_4:-28686418 Msa1322100:CDS
AAATGATTGATGGAGTGGTT+AGG 0.506121 8_4:-28686168 Msa1322100:CDS
TTACTCCTGCTGTTAATTGG+AGG 0.506366 8_4:-28679912 Msa1322100:three_prime_UTR
TATGATTGGAATACTAAGGT+TGG 0.510968 8_4:+28686324 None:intergenic
AGAAACATCGGTTAAAGGCT+TGG 0.513785 8_4:-28678533 Msa1322100:three_prime_UTR
CTTCTTGATGAATCAAAAGA+AGG 0.514398 8_4:-28680300 Msa1322100:three_prime_UTR
CTTCTTGATGAATCAAAAGA+AGG 0.514398 8_4:-28686442 Msa1322100:CDS
TAGTCTACATACACAAATGT+TGG 0.520881 8_4:+28678294 None:intergenic
CCAAAAGTGAGTTCTGGCTC+AGG 0.521055 8_4:+28679357 None:intergenic
GATCACTTCAGAATTTAGGC+TGG 0.521086 8_4:-28678466 Msa1322100:three_prime_UTR
TCCTGAGGATCAAGAGGCTG+AGG 0.532894 8_4:+28679865 None:intergenic
TCTGACTATGTAAACAAAGT+GGG 0.532903 8_4:-28679482 Msa1322100:three_prime_UTR
CTCTTACAAGATCAACTTGG+TGG 0.542970 8_4:-28679297 Msa1322100:three_prime_UTR
GGTGTGAGCAACTCAGGTAT+AGG 0.551566 8_4:+28678577 None:intergenic
AAAGCATGCAAGTGAAAAGT+GGG 0.554883 8_4:-28680097 Msa1322100:three_prime_UTR
GTATCCCTCCAATTAACAGC+AGG 0.556126 8_4:+28679907 None:intergenic
TACTCCTGCTGTTAATTGGA+GGG 0.556340 8_4:-28679911 Msa1322100:three_prime_UTR
GTGAGTTCTGGCTCAGGGCA+AGG 0.559726 8_4:+28679363 None:intergenic
CTCTGACTATGTAAACAAAG+TGG 0.560256 8_4:-28679483 Msa1322100:three_prime_UTR
TAAAGCATGCAAGTGAAAAG+TGG 0.562199 8_4:-28680098 Msa1322100:three_prime_UTR
AAAGACATAGATTGTGCAGA+AGG 0.565467 8_4:-28679414 Msa1322100:three_prime_UTR
TAAATATACCTGCAAACTGT+AGG 0.572012 8_4:+28679838 None:intergenic
GGATGAAATGATTGATGGAG+TGG 0.580120 8_4:-28686173 Msa1322100:CDS
AAGTTAACGACCAAAGTGCC+AGG 0.580544 8_4:+28679228 None:intergenic
GATGTTTCTTTGTAAACAGG+AGG 0.580740 8_4:+28678547 None:intergenic
GATCTTGTAAGAGAACAGTA+AGG 0.581337 8_4:+28679307 None:intergenic
TTCTTTCAAGTGGTCAACCA+TGG 0.585095 8_4:-28686214 Msa1322100:CDS
TAACTTGGGTGACATGATGC+AGG 0.591268 8_4:-28679211 Msa1322100:intron
TTCTTTCAAGTGGTCAACCA+TGG 0.594466 8_4:-28680072 Msa1322100:three_prime_UTR
AAAGTGGGGTTTCTTTCAAG+TGG 0.601591 8_4:-28686224 Msa1322100:CDS
GGCAGATCCTGAGGATCAAG+AGG 0.604526 8_4:+28679859 None:intergenic
AGCGCTTAGAAACTTACCGT+TGG 0.610876 8_4:+28678696 None:intergenic
GTTCTCTTACAAGATCAACT+TGG 0.615663 8_4:-28679300 Msa1322100:three_prime_UTR
TCCTGTTTACAAAGAAACAT+CGG 0.616245 8_4:-28678545 Msa1322100:three_prime_UTR
CAAAAGTGAGTTCTGGCTCA+GGG 0.618115 8_4:+28679358 None:intergenic
GTTCTGGCTCAGGGCAAGGT+GGG 0.623034 8_4:+28679367 None:intergenic
ACGTGAACTTGAATCTGTGT+TGG 0.627272 8_4:+28680140 None:intergenic
AGTTCTGGCTCAGGGCAAGG+TGG 0.639106 8_4:+28679366 None:intergenic
CTGACTATGTAAACAAAGTG+GGG 0.656213 8_4:-28679481 Msa1322100:three_prime_UTR
AAGTATGCAAGTGAAAAGTG+GGG 0.673237 8_4:-28686238 Msa1322100:CDS
AGCATGCAAGTGAAAAGTGG+GGG 0.687236 8_4:-28680095 Msa1322100:three_prime_UTR
CAAACTGTAGGCAGATCCTG+AGG 0.691036 8_4:+28679850 None:intergenic
TGGAAAATAAAGTAATTACA+CGG 0.691932 8_4:+28678314 None:intergenic
AAGCATGCAAGTGAAAAGTG+GGG 0.696849 8_4:-28680096 Msa1322100:three_prime_UTR
AAACAGTAGATGGAATACCA+TGG 0.710703 8_4:+28680055 None:intergenic
AAACAGTAGATGGAATACCA+TGG 0.710703 8_4:+28686197 None:intergenic
TCAAAGAAAGAAACTCAACA+TGG 0.748611 8_4:-28680391 Msa1322100:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTAGAATAATTTCT+TGG + chr8_4:28680662-28680681 None:intergenic 10.0%
!!! TAATTTTTGTAATTTTAAGA+TGG - chr8_4:28683525-28683544 Msa1322100:intron 10.0%
!!! AATTTTTGTAATTTTAAGAT+GGG - chr8_4:28683526-28683545 Msa1322100:intron 10.0%
!!! TATATTTTTAGTTAAATGCT+AGG + chr8_4:28679042-28679061 None:intergenic 15.0%
!! AACAAAATATACTATAAAGT+TGG + chr8_4:28679813-28679832 None:intergenic 15.0%
!! AAAAATTGTTTAAACATTGA+AGG + chr8_4:28679957-28679976 None:intergenic 15.0%
!! AAAAAAAAATTATGTGAGTT+GGG + chr8_4:28680876-28680895 None:intergenic 15.0%
!!! ATTTTTCTAATAACAACATT+TGG - chr8_4:28682630-28682649 Msa1322100:intron 15.0%
!! TCTCGAATAAAAAATAAATT+TGG + chr8_4:28683290-28683309 None:intergenic 15.0%
!! ACTAACAAAAATAAAAAAGT+TGG + chr8_4:28683449-28683468 None:intergenic 15.0%
!! TAAAAATATTATTCTCTCTT+TGG - chr8_4:28683756-28683775 Msa1322100:intron 15.0%
!!! TTTTTATATGAAACGTATAA+TGG + chr8_4:28683990-28684009 None:intergenic 15.0%
!!! ACATTAAAATTTGATGATAT+TGG + chr8_4:28684202-28684221 None:intergenic 15.0%
!! AAAGAAAGAAAAAAAATCTT+GGG + chr8_4:28684227-28684246 None:intergenic 15.0%
!! AAAAGAAAGAAAAAAAATCT+TGG + chr8_4:28684228-28684247 None:intergenic 15.0%
!!! TTTTTTTAATCAAATATGCT+AGG - chr8_4:28684973-28684992 Msa1322100:intron 15.0%
!!! TTTTTTAATCAAATATGCTA+GGG - chr8_4:28684974-28684993 Msa1322100:intron 15.0%
!!! TATATTTTTAGTTAAATGCA+AGG + chr8_4:28685202-28685221 None:intergenic 15.0%
!! TATCATGAATGAAAATCTTT+GGG + chr8_4:28678385-28678404 None:intergenic 20.0%
!! TTATCATGAATGAAAATCTT+TGG + chr8_4:28678386-28678405 None:intergenic 20.0%
!! AGTAACATACAAATCAAAAT+TGG + chr8_4:28678696-28678715 None:intergenic 20.0%
!! TAAATATACCTGCAAATTAT+AGG + chr8_4:28678788-28678807 None:intergenic 20.0%
!!! TTATGCTTTTACTCAAAATT+AGG - chr8_4:28679006-28679025 Msa1322100:intron 20.0%
!! TTTATGAAATATACTAGTAG+CGG + chr8_4:28679583-28679602 None:intergenic 20.0%
!! TGGAAAATAAAGTAATTACA+TGG + chr8_4:28680375-28680394 None:intergenic 20.0%
!! GAAAAAAAAATTATGTGAGT+TGG + chr8_4:28680877-28680896 None:intergenic 20.0%
!! ATAGTCATGTAAAATGAATT+TGG - chr8_4:28680921-28680940 Msa1322100:intron 20.0%
!!! AGCATTTTTTCATGTTAAAA+AGG - chr8_4:28680968-28680987 Msa1322100:intron 20.0%
!!! GCATTTTTTCATGTTAAAAA+GGG - chr8_4:28680969-28680988 Msa1322100:intron 20.0%
!!! GAAATTATGAATGCAATTTT+TGG + chr8_4:28681448-28681467 None:intergenic 20.0%
!! AAACCAAGTTAAATAATATC+AGG + chr8_4:28681756-28681775 None:intergenic 20.0%
!!! TACTAAAAAATGTTTAAGAC+GGG + chr8_4:28682139-28682158 None:intergenic 20.0%
!! GTACTAAAAAATGTTTAAGA+CGG + chr8_4:28682140-28682159 None:intergenic 20.0%
!! AGAAAAATAAAGCAATTACA+TGG + chr8_4:28682618-28682637 None:intergenic 20.0%
!! AATTGTGCTAGTTATTTATA+CGG + chr8_4:28683012-28683031 None:intergenic 20.0%
!!! TGTTATTTTAATCATATGGA+AGG + chr8_4:28683086-28683105 None:intergenic 20.0%
!!! TTGCTGTTATTTTAATCATA+TGG + chr8_4:28683090-28683109 None:intergenic 20.0%
!!! AAATTTTTTGGATTCTGAAA+TGG + chr8_4:28683182-28683201 None:intergenic 20.0%
!! AAATAGAAAAGATAGATAGT+AGG + chr8_4:28683261-28683280 None:intergenic 20.0%
!!! ATAGTTAATCATTTTTAGAC+TGG - chr8_4:28683552-28683571 Msa1322100:intron 20.0%
!!! TAGTTAATCATTTTTAGACT+GGG - chr8_4:28683553-28683572 Msa1322100:intron 20.0%
!!! AAAAGTATGTGTCATTTATA+AGG - chr8_4:28684105-28684124 Msa1322100:intron 20.0%
!!! AAAGTATGTGTCATTTATAA+GGG - chr8_4:28684106-28684125 Msa1322100:intron 20.0%
!! TCAAAAAAAGAAACAACTAA+AGG + chr8_4:28684260-28684279 None:intergenic 20.0%
!!! TTTTGACTTATCTTCAAAAT+TGG - chr8_4:28684274-28684293 Msa1322100:intron 20.0%
!! TATCATGAATGAAAATCTTT+GGG + chr8_4:28678385-28678404 None:intergenic 20.0%
!! TTATCATGAATGAAAATCTT+TGG + chr8_4:28678386-28678405 None:intergenic 20.0%
!! AGTAACATAGAAATCAAAAT+TGG + chr8_4:28684838-28684857 None:intergenic 20.0%
!!! TTTTTAATCAAATATGCTAG+GGG - chr8_4:28684975-28684994 Msa1322100:intron 20.0%
!! TTAATTATAGAATGATTCAG+TGG - chr8_4:28685625-28685644 Msa1322100:intron 20.0%
!!! TAATATAAATTTGGTGTACT+TGG + chr8_4:28685951-28685970 None:intergenic 20.0%
!! AAATATTGTTTAGACATTGA+AGG + chr8_4:28686037-28686056 None:intergenic 20.0%
!!! TTCATATAGTTTTGAATTCT+CGG + chr8_4:28686168-28686187 None:intergenic 20.0%
!! TGGAAAATAAAGTAATTACA+CGG + chr8_4:28680375-28680394 None:intergenic 20.0%
!!! AATGAAAATCTTTGGGATTT+TGG + chr8_4:28678378-28678397 None:intergenic 25.0%
! AATCTATGATTGGAATACTA+AGG + chr8_4:28678448-28678467 None:intergenic 25.0%
!! AGTATTCCAATCATAGATTT+TGG - chr8_4:28678449-28678468 Msa1322100:three_prime_UTR 25.0%
!! TTTTTGTAATCAAGTAGCTT+AGG - chr8_4:28678829-28678848 Msa1322100:intron 25.0%
!! TTTTGTAATCAAGTAGCTTA+GGG - chr8_4:28678830-28678849 Msa1322100:intron 25.0%
! GACATAAAAATGAAGTTACA+AGG + chr8_4:28679491-28679510 None:intergenic 25.0%
! TCATAATATGTTACAACTTG+AGG + chr8_4:28679643-28679662 None:intergenic 25.0%
! TAATATTTCAGAATTGTAGC+CGG - chr8_4:28679834-28679853 Msa1322100:intron 25.0%
! AAAGATTCACAATTAGGATT+GGG + chr8_4:28679910-28679929 None:intergenic 25.0%
! ATCTTGAAAGATTCACAATT+AGG + chr8_4:28679916-28679935 None:intergenic 25.0%
!!! TCCATATAGTTTTGAATTCT+CGG + chr8_4:28680088-28680107 None:intergenic 25.0%
! AGCAAGAAGAATGAATAAAT+TGG - chr8_4:28680244-28680263 Msa1322100:three_prime_UTR 25.0%
!!! CTTTATTTTCCAACAACATT+TGG - chr8_4:28680383-28680402 Msa1322100:three_prime_UTR 25.0%
! TGTATATGTGATTGCAATTA+GGG + chr8_4:28680547-28680566 None:intergenic 25.0%
! ATGTATATGTGATTGCAATT+AGG + chr8_4:28680548-28680567 None:intergenic 25.0%
! AGTTAAAAAACGTGTATGTT+TGG - chr8_4:28681027-28681046 Msa1322100:intron 25.0%
! ATTCTCATTTCTTGAAACTT+TGG - chr8_4:28681332-28681351 Msa1322100:intron 25.0%
! AACAATTCATATCAATAGGT+CGG + chr8_4:28681536-28681555 None:intergenic 25.0%
! AAGCCTGATATTATTTAACT+TGG - chr8_4:28681750-28681769 Msa1322100:intron 25.0%
!!! TAAACATTTTTTAGTACCTG+TGG - chr8_4:28682143-28682162 Msa1322100:intron 25.0%
!!! ATATAGTTTTGTATTTTCCG+GGG + chr8_4:28682329-28682348 None:intergenic 25.0%
!!! CATATAGTTTTGTATTTTCC+GGG + chr8_4:28682330-28682349 None:intergenic 25.0%
!!! CCATATAGTTTTGTATTTTC+CGG + chr8_4:28682331-28682350 None:intergenic 25.0%
! TTACAAGGAAACATCAATAA+AGG - chr8_4:28682390-28682409 Msa1322100:intron 25.0%
! TCTCGAAACTATATAGAAAA+GGG - chr8_4:28682418-28682437 Msa1322100:intron 25.0%
!!! TATTGCAGTTTTAGCAATTT+GGG + chr8_4:28682910-28682929 None:intergenic 25.0%
!!! TTATTGCAGTTTTAGCAATT+TGG + chr8_4:28682911-28682930 None:intergenic 25.0%
! ATAACTAGCACAATTGATAA+AGG - chr8_4:28683017-28683036 Msa1322100:intron 25.0%
! TGCAGTAATATGAATTCAAA+TGG - chr8_4:28683057-28683076 Msa1322100:intron 25.0%
! CTTGATATGGTAAATTCTAT+TGG + chr8_4:28683137-28683156 None:intergenic 25.0%
! GAATCAATACAATCTTGATA+TGG + chr8_4:28683150-28683169 None:intergenic 25.0%
!!! TCAAGATTGTATTGATTCAT+AGG - chr8_4:28683152-28683171 Msa1322100:intron 25.0%
! ATAATGTAAATGCACATAGT+AGG + chr8_4:28683208-28683227 None:intergenic 25.0%
!!! TTGACAATCTCGTTATTTTT+TGG - chr8_4:28683826-28683845 Msa1322100:intron 25.0%
!!! TGACAATCTCGTTATTTTTT+GGG - chr8_4:28683827-28683846 Msa1322100:intron 25.0%
! AATGGAGGTAAATGAAAAAA+AGG + chr8_4:28683972-28683991 None:intergenic 25.0%
! TTATATGAAACGTATAATGG+AGG + chr8_4:28683987-28684006 None:intergenic 25.0%
!!! AATGAAAATCTTTGGGATTT+TGG + chr8_4:28678378-28678397 None:intergenic 25.0%
! TATGATTGGAATACTAAGAT+TGG + chr8_4:28684586-28684605 None:intergenic 25.0%
!! AGTATTCCAATCATAGATTT+TGG - chr8_4:28678449-28678468 Msa1322100:three_prime_UTR 25.0%
! ACTGTAGTAACAATTTATTC+AGG + chr8_4:28685137-28685156 None:intergenic 25.0%
! AAATTGTTACTACAGTACAA+TGG - chr8_4:28685141-28685160 Msa1322100:intron 25.0%
!! TTGTGCTTTTACTCAAAATT+AGG - chr8_4:28685170-28685189 Msa1322100:intron 25.0%
!! ATTTTATGACAAAGACTAGT+AGG + chr8_4:28685733-28685752 None:intergenic 25.0%
! TCATAATATGTTACTAGTTG+AGG + chr8_4:28685791-28685810 None:intergenic 25.0%
! ATCTTGAAAGATTCACAATT+AGG + chr8_4:28679916-28679935 None:intergenic 25.0%
!!! TCATATAGTTTTGAATTCTC+GGG + chr8_4:28686167-28686186 None:intergenic 25.0%
! AGCAAGAAGAATGAATAAAT+TGG - chr8_4:28680244-28680263 Msa1322100:three_prime_UTR 25.0%
! ACTTTAGTCTACATAAACTT+TGG + chr8_4:28680446-28680465 None:intergenic 25.0%
CTTCTTGATGAATCAAAAGA+AGG - chr8_4:28678323-28678342 Msa1322100:three_prime_UTR 30.0%
! GAATCAAAAGAAGGTGTAAA+AGG - chr8_4:28678332-28678351 Msa1322100:three_prime_UTR 30.0%
TATGATTGGAATACTAAGGT+TGG + chr8_4:28678444-28678463 None:intergenic 30.0%
AAAGGTCCAAAATCTATGAT+TGG + chr8_4:28678458-28678477 None:intergenic 30.0%
! GAATCTGTGTTGGTAAATAA+AGG + chr8_4:28678476-28678495 None:intergenic 30.0%
TAAAGTATGCAAGTGAAAAG+TGG - chr8_4:28678525-28678544 Msa1322100:three_prime_UTR 30.0%
AAAGTATGCAAGTGAAAAGT+GGG - chr8_4:28678526-28678545 Msa1322100:three_prime_UTR 30.0%
ATTTCATCCAAAACAGTAGA+TGG + chr8_4:28678581-28678600 None:intergenic 30.0%
!! GTTTTGGATGAAATGATTGA+TGG - chr8_4:28678587-28678606 Msa1322100:three_prime_UTR 30.0%
GATACTCTTTCTTGTGTTAT+GGG - chr8_4:28678734-28678753 Msa1322100:intron 30.0%
TTTGTAATCAAGTAGCTTAG+GGG - chr8_4:28678831-28678850 Msa1322100:intron 30.0%
CACATTTGAAGATGAATAAG+TGG - chr8_4:28678863-28678882 Msa1322100:intron 30.0%
TCTGACTATGTTAACAAAGT+GGG - chr8_4:28679123-28679142 Msa1322100:intron 30.0%
!! ACTGATTTTCATGGAAAACT+TGG + chr8_4:28679347-28679366 None:intergenic 30.0%
! AAGTTTTCCATGAAAATCAG+TGG - chr8_4:28679346-28679365 Msa1322100:three_prime_UTR 30.0%
! AGTTTTCCATGAAAATCAGT+GGG - chr8_4:28679347-28679366 Msa1322100:three_prime_UTR 30.0%
AAAATGAAGTTACAAGGAGA+TGG + chr8_4:28679485-28679504 None:intergenic 30.0%
GTTACAACTTGAGGAATTTA+TGG + chr8_4:28679634-28679653 None:intergenic 30.0%
ATTATGAGATGATGATACGA+TGG - chr8_4:28679656-28679675 Msa1322100:intron 30.0%
!! TACTATAAAGTTGGTGAACT+TGG + chr8_4:28679804-28679823 None:intergenic 30.0%
AATATTTCAGAATTGTAGCC+GGG - chr8_4:28679835-28679854 Msa1322100:intron 30.0%
AAGTAGTTTGATCTTGTTCT+AGG + chr8_4:28679861-28679880 None:intergenic 30.0%
GAAAGATTCACAATTAGGAT+TGG + chr8_4:28679911-28679930 None:intergenic 30.0%
AAGATCAAGCTAATCCAAAT+TGG - chr8_4:28679931-28679950 Msa1322100:three_prime_UTR 30.0%
TTAAACATTGAAGGCCAATT+TGG + chr8_4:28679948-28679967 None:intergenic 30.0%
!!! ATATAGTTTTGAATTCTCGG+GGG + chr8_4:28680085-28680104 None:intergenic 30.0%
!!! CATATAGTTTTGAATTCTCG+GGG + chr8_4:28680086-28680105 None:intergenic 30.0%
!!! CCATATAGTTTTGAATTCTC+GGG + chr8_4:28680087-28680106 None:intergenic 30.0%
GAATGAATAAATTGGCTGAT+AGG - chr8_4:28680252-28680271 Msa1322100:three_prime_UTR 30.0%
! GGAATGTAAATTTGCTTGAA+AGG - chr8_4:28680273-28680292 Msa1322100:three_prime_UTR 30.0%
TATAAGTGAGAGATTCAATG+TGG - chr8_4:28680298-28680317 Msa1322100:three_prime_UTR 30.0%
!! AAACTTTAGTTCTTGCTCAA+TGG + chr8_4:28680432-28680451 None:intergenic 30.0%
GCAAAATAGAAAAATGTGAC+AGG + chr8_4:28680493-28680512 None:intergenic 30.0%
! TGGCTACAAAACTAAAGTTT+TGG + chr8_4:28680571-28680590 None:intergenic 30.0%
TGACAACAAGATTCAAACTT+CGG + chr8_4:28680795-28680814 None:intergenic 30.0%
ACAGGGGTTAAAATTGATTA+TGG - chr8_4:28681060-28681079 Msa1322100:intron 30.0%
AGCTTGAAGTAGAATCTATT+CGG + chr8_4:28681144-28681163 None:intergenic 30.0%
ACGCAACAATTCATATCAAT+AGG + chr8_4:28681540-28681559 None:intergenic 30.0%
TCTGAGTATGTTAAGAAAGT+GGG - chr8_4:28681803-28681822 Msa1322100:intron 30.0%
ATCTATGTCATTAAGGTAAC+TGG + chr8_4:28681873-28681892 None:intergenic 30.0%
!! ACTGATTTTCATGGAAAACT+TGG + chr8_4:28679347-28679366 None:intergenic 30.0%
! AAGTTTTCCATGAAAATCAG+TGG - chr8_4:28679346-28679365 Msa1322100:three_prime_UTR 30.0%
! AGTTTTCCATGAAAATCAGT+GGG - chr8_4:28679347-28679366 Msa1322100:three_prime_UTR 30.0%
CCGGAAAATACAAAACTATA+TGG - chr8_4:28682328-28682347 Msa1322100:intron 30.0%
ATTGATGTTTCCTTGTAAAG+TGG + chr8_4:28682388-28682407 None:intergenic 30.0%
GTCTCGAAACTATATAGAAA+AGG - chr8_4:28682417-28682436 Msa1322100:intron 30.0%
AGCAAGAGGAATGAATAAAT+TGG - chr8_4:28682487-28682506 Msa1322100:intron 30.0%
GAATGAATAAATTGGCTGAT+AGG - chr8_4:28680252-28680271 Msa1322100:three_prime_UTR 30.0%
AATAAATTGGCTGATAGGAA+TGG - chr8_4:28680257-28680276 Msa1322100:three_prime_UTR 30.0%
GTTTCTAAACTCTACAATCT+TGG - chr8_4:28682567-28682586 Msa1322100:intron 30.0%
TAATAACAACATTTGGCGTA+GGG - chr8_4:28682637-28682656 Msa1322100:intron 30.0%
TGTACCTATGATTGCAATTA+AGG + chr8_4:28682744-28682763 None:intergenic 30.0%
! AATGCAGGACTCTAATATTT+TGG + chr8_4:28682768-28682787 None:intergenic 30.0%
CTTGAACATGTGTTTATAAG+TGG - chr8_4:28682801-28682820 Msa1322100:intron 30.0%
!!! AACTTTTGACTTAGAAATCG+TGG + chr8_4:28682877-28682896 None:intergenic 30.0%
ATCCCTAATAAAACATGTAG+TGG - chr8_4:28682946-28682965 Msa1322100:intron 30.0%
!! CTCCACTACATGTTTTATTA+GGG + chr8_4:28682951-28682970 None:intergenic 30.0%
!! TCTCCACTACATGTTTTATT+AGG + chr8_4:28682952-28682971 None:intergenic 30.0%
!!! CATAGTAGGTGCAAATTTTT+TGG + chr8_4:28683194-28683213 None:intergenic 30.0%
GCATTTACATTATGTGTGTT+TGG - chr8_4:28683215-28683234 Msa1322100:intron 30.0%
! CTAGCATTTTCCTAAAAAGT+TGG + chr8_4:28683404-28683423 None:intergenic 30.0%
ACGAAACTTACAATTTCAGT+GGG - chr8_4:28683474-28683493 Msa1322100:intron 30.0%
ATCACAAGAGACAAATAGAT+AGG + chr8_4:28683586-28683605 None:intergenic 30.0%
! ACTTAAGTGACATTGAGTTT+TGG - chr8_4:28683854-28683873 Msa1322100:intron 30.0%
TTAATTTCACCCCATGTAAA+AGG - chr8_4:28684020-28684039 Msa1322100:intron 30.0%
TAATTTCACCCCATGTAAAA+GGG - chr8_4:28684021-28684040 Msa1322100:intron 30.0%
TCAAAGAAAGAAACTCAACA+TGG - chr8_4:28684374-28684393 Msa1322100:intron 30.0%
GTCTATCATAAACATGTTCA+TGG + chr8_4:28684431-28684450 None:intergenic 30.0%
CTTCTTGATGAATCAAAAGA+AGG - chr8_4:28678323-28678342 Msa1322100:three_prime_UTR 30.0%
! GAATCAAAAGAAGGTGTAAA+AGG - chr8_4:28678332-28678351 Msa1322100:three_prime_UTR 30.0%
AAAGGTCCAAAATCTATGAT+TGG + chr8_4:28678458-28678477 None:intergenic 30.0%
! GAATCTGTGTTGGTAAATAA+AGG + chr8_4:28678476-28678495 None:intergenic 30.0%
GATACCCTTTATTGTGTTAT+GGG - chr8_4:28684876-28684895 Msa1322100:intron 30.0%
TAAATATACCTGCAAACTGT+AGG + chr8_4:28684930-28684949 None:intergenic 30.0%
CACATTTGAAGATGAATAAG+TGG - chr8_4:28678863-28678882 Msa1322100:intron 30.0%
TCTGACTATGTAAACAAAGT+GGG - chr8_4:28685283-28685302 Msa1322100:intron 30.0%
!! ATCTATGTCTTTAAGGTAAC+TGG + chr8_4:28685343-28685362 None:intergenic 30.0%
!! ACTGATTTTCATGGAAAACT+TGG + chr8_4:28679347-28679366 None:intergenic 30.0%
! AAGTTTTCCATGAAAATCAG+TGG - chr8_4:28679346-28679365 Msa1322100:three_prime_UTR 30.0%
! AGTTTTCCATGAAAATCAGT+GGG - chr8_4:28679347-28679366 Msa1322100:three_prime_UTR 30.0%
AAAGATTCACAATTAGGATC+GGG + chr8_4:28685990-28686009 None:intergenic 30.0%
GAAAGATTCACAATTAGGAT+CGG + chr8_4:28679911-28679930 None:intergenic 30.0%
AAGATCAAGCTAATCCAAAT+TGG - chr8_4:28679931-28679950 Msa1322100:three_prime_UTR 30.0%
!!! ATATAGTTTTGAATTCTCGG+GGG + chr8_4:28680085-28680104 None:intergenic 30.0%
!!! CATATAGTTTTGAATTCTCG+GGG + chr8_4:28680086-28680105 None:intergenic 30.0%
TCCTGTTTACAAAGAAACAT+CGG - chr8_4:28686220-28686239 Msa1322100:CDS 30.0%
! TACAAAGAAACATCGGTTAA+AGG - chr8_4:28686227-28686246 Msa1322100:CDS 30.0%
ACTAGATCACTTCAGAATTT+AGG - chr8_4:28686295-28686314 Msa1322100:intron 30.0%
GAATGAATAAATTGGCTGAT+AGG - chr8_4:28680252-28680271 Msa1322100:three_prime_UTR 30.0%
! GGAATGTAAATTTGCTTGAA+AGG - chr8_4:28680273-28680292 Msa1322100:three_prime_UTR 30.0%
TAGTCTACATACACAAATGT+TGG + chr8_4:28686474-28686493 None:intergenic 30.0%
!! GGTCTTGTTTGATTTCTTCT+AGG + chr8_4:28678268-28678287 None:intergenic 35.0%
GTCGATCATAAACATGTTCA+TGG + chr8_4:28678289-28678308 None:intergenic 35.0%
AAGTATGCAAGTGAAAAGTG+GGG - chr8_4:28678527-28678546 Msa1322100:three_prime_UTR 35.0%
AAACAGTAGATGGAATACCA+TGG + chr8_4:28678571-28678590 None:intergenic 35.0%
! TGGTATTCCATCTACTGTTT+TGG - chr8_4:28678571-28678590 Msa1322100:three_prime_UTR 35.0%
AAATGATTGATGGAGTGGTT+AGG - chr8_4:28678597-28678616 Msa1322100:three_prime_UTR 35.0%
ATGTTACTCCAGCTGTTAAT+TGG - chr8_4:28678708-28678727 Msa1322100:intron 35.0%
GGATACTCTTTCTTGTGTTA+TGG - chr8_4:28678733-28678752 Msa1322100:intron 35.0%
ATGAATAAGTGGAGAATCTG+AGG - chr8_4:28678874-28678893 Msa1322100:intron 35.0%
!! AGCTTGTTACTACAGTACAA+TGG - chr8_4:28678977-28678996 Msa1322100:intron 35.0%
TGTTACTACAGTACAATGGT+TGG - chr8_4:28678981-28679000 Msa1322100:intron 35.0%
CTCTGACTATGTTAACAAAG+TGG - chr8_4:28679122-28679141 Msa1322100:intron 35.0%
CTGACTATGTTAACAAAGTG+GGG - chr8_4:28679124-28679143 Msa1322100:intron 35.0%
ACTCAATTCCAGTTACCTTA+AGG - chr8_4:28679182-28679201 Msa1322100:intron 35.0%
ATCTATGTCCTTAAGGTAAC+TGG + chr8_4:28679193-28679212 None:intergenic 35.0%
! GTGGGTAATAATGGGAAATT+AGG + chr8_4:28679233-28679252 None:intergenic 35.0%
GATCTTGTAAGAGAACAGTA+AGG + chr8_4:28679311-28679330 None:intergenic 35.0%
GTTCTCTTACAAGATCAACT+TGG - chr8_4:28679315-28679334 Msa1322100:three_prime_UTR 35.0%
! GATTTTCATGGAAAACTTGG+AGG + chr8_4:28679344-28679363 None:intergenic 35.0%
!! TGGTTTGCTTCTAAACAAGT+TGG + chr8_4:28679614-28679633 None:intergenic 35.0%
AACGCTTAGAAACTTATCGT+TGG + chr8_4:28679992-28680011 None:intergenic 35.0%
!!! TATAGTTTTGAATTCTCGGG+GGG + chr8_4:28680084-28680103 None:intergenic 35.0%
CCCGAGAATTCAAAACTATA+TGG - chr8_4:28680084-28680103 Msa1322100:three_prime_UTR 35.0%
!! TACAAGGAAGCATCAGTTAA+AGG - chr8_4:28680147-28680166 Msa1322100:three_prime_UTR 35.0%
TACTATGGAAAAGGACTAGA+TGG - chr8_4:28680183-28680202 Msa1322100:three_prime_UTR 35.0%
ACTAGATCACTTCAGAATTC+AGG - chr8_4:28680215-28680234 Msa1322100:three_prime_UTR 35.0%
GTTTGTAAACTCTCCAATCT+TGG - chr8_4:28680324-28680343 Msa1322100:three_prime_UTR 35.0%
!! TATTGCAGTTTTAGCGATTC+TGG + chr8_4:28680591-28680610 None:intergenic 35.0%
ATCCCTAATACAACATGTAG+TGG - chr8_4:28680627-28680646 Msa1322100:intron 35.0%
CTCCACTACATGTTGTATTA+GGG + chr8_4:28680632-28680651 None:intergenic 35.0%
TCTCCACTACATGTTGTATT+AGG + chr8_4:28680633-28680652 None:intergenic 35.0%
TTCAGCTCAAATCTCACAAA+AGG - chr8_4:28680768-28680787 Msa1322100:intron 35.0%
AATGCAAAAACCGCATTTGT+GGG - chr8_4:28680814-28680833 Msa1322100:intron 35.0%
! AAATTATGTGAGTTGGGTCT+CGG + chr8_4:28680870-28680889 None:intergenic 35.0%
GTGCTCATCTATTAAACTCA+CGG - chr8_4:28680943-28680962 Msa1322100:intron 35.0%
!! AATTTTAACCCCTGTAGAAG+TGG + chr8_4:28681055-28681074 None:intergenic 35.0%
GGGGTTAAAATTGATTATGG+AGG - chr8_4:28681063-28681082 Msa1322100:intron 35.0%
! ACAATTGATTCCGACATGTT+TGG - chr8_4:28681089-28681108 Msa1322100:intron 35.0%
GCTTGAAGTAGAATCTATTC+GGG + chr8_4:28681143-28681162 None:intergenic 35.0%
GCTTGTGTGTATTGAATACT+CGG - chr8_4:28681624-28681643 Msa1322100:intron 35.0%
TCGGTGAAATTGATCTTGAT+TGG - chr8_4:28681643-28681662 Msa1322100:intron 35.0%
TGATCTTGATTGGAATCTGT+AGG - chr8_4:28681653-28681672 Msa1322100:intron 35.0%
CTCTGAGTATGTTAAGAAAG+TGG - chr8_4:28681802-28681821 Msa1322100:intron 35.0%
CTGAGTATGTTAAGAAAGTG+GGG - chr8_4:28681804-28681823 Msa1322100:intron 35.0%
!! GAATTGCTTTCTGAAGCATT+AGG - chr8_4:28681839-28681858 Msa1322100:intron 35.0%
CATTAAGGTAACTGGAATTG+AGG + chr8_4:28681865-28681884 None:intergenic 35.0%
CTGCACAATCTATGTCATTA+AGG + chr8_4:28681880-28681899 None:intergenic 35.0%
AATGACATAGATTGTGCAGA+AGG - chr8_4:28681881-28681900 Msa1322100:intron 35.0%
! GTGGGTAATAATGGGAAATT+AGG + chr8_4:28679233-28679252 None:intergenic 35.0%
GTTGTCTTACAAGATCAACT+TGG - chr8_4:28681995-28682014 Msa1322100:intron 35.0%
! GATTTTCATGGAAAACTTGG+AGG + chr8_4:28679344-28679363 None:intergenic 35.0%
AAGCATTAAACACAGAGTTC+TGG - chr8_4:28682250-28682269 Msa1322100:intron 35.0%
AGGAAACATCAATAAAGGCT+TGG - chr8_4:28682395-28682414 Msa1322100:intron 35.0%
CTATATAGAAAAGGGCTAGA+TGG - chr8_4:28682426-28682445 Msa1322100:intron 35.0%
ACTAGATCACTTCAGAATTC+AGG - chr8_4:28680215-28680234 Msa1322100:three_prime_UTR 35.0%
! GGAATGGAAATTTGCTTGAA+AGG - chr8_4:28682516-28682535 Msa1322100:intron 35.0%
CTAATAACAACATTTGGCGT+AGG - chr8_4:28682636-28682655 Msa1322100:intron 35.0%
TCAGCCTTAATTGCAATCAT+AGG - chr8_4:28682737-28682756 Msa1322100:intron 35.0%
GAACATGTGTTTATAAGTGG+AGG - chr8_4:28682804-28682823 Msa1322100:intron 35.0%
! GACAATTTGGCCAACTTTTT+AGG - chr8_4:28683391-28683410 Msa1322100:intron 35.0%
AAAATGCTAGCACGCATTAA+TGG - chr8_4:28683414-28683433 Msa1322100:intron 35.0%
GACGAAACTTACAATTTCAG+TGG - chr8_4:28683473-28683492 Msa1322100:intron 35.0%
CGAAACTTACAATTTCAGTG+GGG - chr8_4:28683475-28683494 Msa1322100:intron 35.0%
! TACGAGTTTTCCGAGTAAAT+AGG + chr8_4:28683507-28683526 None:intergenic 35.0%
CTTCAGATTAATCGAACAAC+GGG + chr8_4:28683625-28683644 None:intergenic 35.0%
CCTTCAGATTAATCGAACAA+CGG + chr8_4:28683626-28683645 None:intergenic 35.0%
!! TAAGTGACATTGAGTTTTGG+TGG - chr8_4:28683857-28683876 Msa1322100:intron 35.0%
!!! GATATCTGTCTTTGGCTTTT+TGG + chr8_4:28684336-28684355 None:intergenic 35.0%
ACAGATGAGATATCTGTCTT+TGG + chr8_4:28684344-28684363 None:intergenic 35.0%
TAAAGCATGCAAGTGAAAAG+TGG - chr8_4:28684667-28684686 Msa1322100:intron 35.0%
AAAGCATGCAAGTGAAAAGT+GGG - chr8_4:28684668-28684687 Msa1322100:intron 35.0%
AAACAGTAGATGGAATACCA+TGG + chr8_4:28678571-28678590 None:intergenic 35.0%
! TGGTATTCCATCTACTGTTT+TGG - chr8_4:28678571-28678590 Msa1322100:three_prime_UTR 35.0%
ATCTCATCCAAAACAGTAGA+TGG + chr8_4:28684723-28684742 None:intergenic 35.0%
!! GTTTTGGATGAGATGATTGA+TGG - chr8_4:28684729-28684748 Msa1322100:intron 35.0%
AGATGATTGATGGAGTGATT+AGG - chr8_4:28684739-28684758 Msa1322100:intron 35.0%
ATGTTACTCCTGCTGTTAAT+TGG - chr8_4:28684850-28684869 Msa1322100:intron 35.0%
GGATACCCTTTATTGTGTTA+TGG - chr8_4:28684875-28684894 Msa1322100:intron 35.0%
AGGACCCATAACACAATAAA+GGG + chr8_4:28684883-28684902 None:intergenic 35.0%
ATGAATAAGTGGAGAATCTG+AGG - chr8_4:28678874-28678893 Msa1322100:intron 35.0%
TGTTACTACAGTACAATGGT+TGG - chr8_4:28678981-28679000 Msa1322100:intron 35.0%
CTCTGACTATGTAAACAAAG+TGG - chr8_4:28685282-28685301 Msa1322100:intron 35.0%
CTGACTATGTAAACAAAGTG+GGG - chr8_4:28685284-28685303 Msa1322100:intron 35.0%
!! GAATTGCTTTCTGAAGCATT+AGG - chr8_4:28681839-28681858 Msa1322100:intron 35.0%
CTGCACAATCTATGTCTTTA+AGG + chr8_4:28685350-28685369 None:intergenic 35.0%
AAAGACATAGATTGTGCAGA+AGG - chr8_4:28685351-28685370 Msa1322100:intron 35.0%
! GTGGGTAATAATGGGAAATT+AGG + chr8_4:28679233-28679252 None:intergenic 35.0%
GATCTTGTAAGAGAACAGTA+AGG + chr8_4:28679311-28679330 None:intergenic 35.0%
GTTCTCTTACAAGATCAACT+TGG - chr8_4:28679315-28679334 Msa1322100:three_prime_UTR 35.0%
! GATTTTCATGGAAAACTTGG+AGG + chr8_4:28679344-28679363 None:intergenic 35.0%
GACGGAAAAATGAAGTTACA+AGG + chr8_4:28685661-28685680 None:intergenic 35.0%
TTAGACATTGAAGGCCAATT+TGG + chr8_4:28686028-28686047 None:intergenic 35.0%
! ATTTTGCAGCTAATCACCAA+CGG - chr8_4:28686053-28686072 Msa1322100:intron 35.0%
! GAAACTCTTGGACCAATTTT+TGG + chr8_4:28686113-28686132 None:intergenic 35.0%
!!! TTTCAGTAGCATGCTTTTTC+AGG - chr8_4:28686129-28686148 Msa1322100:CDS 35.0%
!!! TATAGTTTTGAATTCTCGGG+GGG + chr8_4:28680084-28680103 None:intergenic 35.0%
GATGTTTCTTTGTAAACAGG+AGG + chr8_4:28686221-28686240 None:intergenic 35.0%
ACCGATGTTTCTTTGTAAAC+AGG + chr8_4:28686224-28686243 None:intergenic 35.0%
TACTATGGAAAAGGACTAGA+TGG - chr8_4:28680183-28680202 Msa1322100:three_prime_UTR 35.0%
GTTTGTAAACTCTCCAATCT+TGG - chr8_4:28680324-28680343 Msa1322100:three_prime_UTR 35.0%
GTAAAAGGACTTGTAGATGC+TGG - chr8_4:28678347-28678366 Msa1322100:three_prime_UTR 40.0%
ACGTGAACTTGAATCTGTGT+TGG + chr8_4:28678486-28678505 None:intergenic 40.0%
AAAGTGGGGTTTCTTTCAAG+TGG - chr8_4:28678541-28678560 Msa1322100:three_prime_UTR 40.0%
! TTCTTTCAAGTGGTCAACCA+TGG - chr8_4:28678551-28678570 Msa1322100:three_prime_UTR 40.0%
GGATGAAATGATTGATGGAG+TGG - chr8_4:28678592-28678611 Msa1322100:three_prime_UTR 40.0%
TTACTCCAGCTGTTAATTGG+AGG - chr8_4:28678711-28678730 Msa1322100:intron 40.0%
TACTCCAGCTGTTAATTGGA+GGG - chr8_4:28678712-28678731 Msa1322100:intron 40.0%
CAAATTATAGGCAGATCCTG+AGG + chr8_4:28678776-28678795 None:intergenic 40.0%
! AGGATCTGCCTATAATTTGC+AGG - chr8_4:28678777-28678796 Msa1322100:intron 40.0%
TTCTTACTCCCTGTGAGTTT+AGG + chr8_4:28678912-28678931 None:intergenic 40.0%
!! GAACTGCTTTCTGAAGCATT+AGG - chr8_4:28679159-28679178 Msa1322100:intron 40.0%
CTGCACAATCTATGTCCTTA+AGG + chr8_4:28679200-28679219 None:intergenic 40.0%
AAGGACATAGATTGTGCAGA+AGG - chr8_4:28679201-28679220 Msa1322100:intron 40.0%
CTCTTACAAGATCAACTTGG+TGG - chr8_4:28679318-28679337 Msa1322100:three_prime_UTR 40.0%
!!! CATCAACCCACTGATTTTCA+TGG + chr8_4:28679356-28679375 None:intergenic 40.0%
TACTAGAAAAACGCTAGCGA+CGG + chr8_4:28679538-28679557 None:intergenic 40.0%
! CAGAAAGCAAATTTTGCAGC+TGG + chr8_4:28679735-28679754 None:intergenic 40.0%
! CAGCTGCAAAATTTGCTTTC+TGG - chr8_4:28679733-28679752 Msa1322100:intron 40.0%
AAGCGTTAAACACAGAGTTC+TGG - chr8_4:28680005-28680024 Msa1322100:three_prime_UTR 40.0%
! AGAGTTCTGGCACCAAAAAT+TGG - chr8_4:28680018-28680037 Msa1322100:three_prime_UTR 40.0%
!!! TGTCAGTAGCATGCTTTTTC+AGG - chr8_4:28680049-28680068 Msa1322100:three_prime_UTR 40.0%
TTGTAAACAGGAGGATTCTC+TGG + chr8_4:28680132-28680151 None:intergenic 40.0%
AGAGAATCCTCCTGTTTACA+AGG - chr8_4:28680131-28680150 Msa1322100:three_prime_UTR 40.0%
ACTGATGCTTCCTTGTAAAC+AGG + chr8_4:28680144-28680163 None:intergenic 40.0%
GTCTCACACTACTATGGAAA+AGG - chr8_4:28680174-28680193 Msa1322100:three_prime_UTR 40.0%
CAGACTCATAAGACCAAGAT+TGG + chr8_4:28680340-28680359 None:intergenic 40.0%
TAGTCTACGCCAAATGTTGT+TGG + chr8_4:28680395-28680414 None:intergenic 40.0%
CAATGCAAAAACCGCATTTG+TGG - chr8_4:28680813-28680832 Msa1322100:intron 40.0%
GTTTCAGATACCCACAAATG+CGG + chr8_4:28680827-28680846 None:intergenic 40.0%
! AATTATGTGAGTTGGGTCTC+GGG + chr8_4:28680869-28680888 None:intergenic 40.0%
! ATGTTTGGTTCCACTTCTAC+AGG - chr8_4:28681042-28681061 Msa1322100:intron 40.0%
! TGTTTGGTTCCACTTCTACA+GGG - chr8_4:28681043-28681062 Msa1322100:intron 40.0%
TCGAAAGCAACCAAACATGT+CGG + chr8_4:28681102-28681121 None:intergenic 40.0%
TGAAGTAGAATCTATTCGGG+AGG + chr8_4:28681140-28681159 None:intergenic 40.0%
! TTCAGAATAAAGAGCGCGTT+TGG + chr8_4:28681306-28681325 None:intergenic 40.0%
AGATTCGAGACTCGTATGAT+GGG + chr8_4:28681499-28681518 None:intergenic 40.0%
AAGATTCGAGACTCGTATGA+TGG + chr8_4:28681500-28681519 None:intergenic 40.0%
CAATAGTCAATTCAGGCTCA+GGG + chr8_4:28681940-28681959 None:intergenic 40.0%
CTAGCACCAATAGTCAATTC+AGG + chr8_4:28681947-28681966 None:intergenic 40.0%
GATCTTGTAAGACAACAGTG+AGG + chr8_4:28681991-28682010 None:intergenic 40.0%
GTCTTACAAGATCAACTTGG+TGG - chr8_4:28681998-28682017 Msa1322100:intron 40.0%
!!! CATCTACCCACTGATTTTCA+TGG + chr8_4:28682036-28682055 None:intergenic 40.0%
!! TTGTAAAGTGGTGGATTCTC+TGG + chr8_4:28682376-28682395 None:intergenic 40.0%
AGAGAATCCACCACTTTACA+AGG - chr8_4:28682375-28682394 Msa1322100:intron 40.0%
GATGTTTCCTTGTAAAGTGG+TGG + chr8_4:28682385-28682404 None:intergenic 40.0%
AATTCAGGCTGAAAAGCAAG+AGG - chr8_4:28682473-28682492 Msa1322100:intron 40.0%
GTCCTGCATTGAACATAGTA+AGG - chr8_4:28682778-28682797 Msa1322100:intron 40.0%
AGCCTTACTATGTTCAATGC+AGG + chr8_4:28682783-28682802 None:intergenic 40.0%
GAAATTCTCACCTTACAAGC+CGG - chr8_4:28682826-28682845 Msa1322100:intron 40.0%
TAAGGTGGTCTATCTATCAC+TGG + chr8_4:28683333-28683352 None:intergenic 40.0%
CCAAATTGTCTAATGCCACA+CGG + chr8_4:28683381-28683400 None:intergenic 40.0%
GCACGCATTAATGGTCAATT+TGG - chr8_4:28683423-28683442 Msa1322100:intron 40.0%
GGGGTAATTGCCTATTTACT+CGG - chr8_4:28683494-28683513 Msa1322100:intron 40.0%
CCGTTGTTCGATTAATCTGA+AGG - chr8_4:28683623-28683642 Msa1322100:intron 40.0%
! CTAACACTCCCTTTTACATG+GGG + chr8_4:28684032-28684051 None:intergenic 40.0%
! CCTAACACTCCCTTTTACAT+GGG + chr8_4:28684033-28684052 None:intergenic 40.0%
! ACCTAACACTCCCTTTTACA+TGG + chr8_4:28684034-28684053 None:intergenic 40.0%
!! ATGTAAAAGGGAGTGTTAGG+TGG - chr8_4:28684033-28684052 Msa1322100:intron 40.0%
!! TGTAAAAGGGAGTGTTAGGT+GGG - chr8_4:28684034-28684053 Msa1322100:intron 40.0%
CCATAGATAGATGTGACATG+TGG + chr8_4:28684078-28684097 None:intergenic 40.0%
CCACATGTCACATCTATCTA+TGG - chr8_4:28684075-28684094 Msa1322100:intron 40.0%
CATGTCACATCTATCTATGG+CGG - chr8_4:28684078-28684097 Msa1322100:intron 40.0%
GTAAAAGGACTTGTAGATGC+TGG - chr8_4:28678347-28678366 Msa1322100:three_prime_UTR 40.0%
ACGTGAACTTGAATCTGTGT+TGG + chr8_4:28678486-28678505 None:intergenic 40.0%
AAGCATGCAAGTGAAAAGTG+GGG - chr8_4:28684669-28684688 Msa1322100:intron 40.0%
! TTCTTTCAAGTGGTCAACCA+TGG - chr8_4:28678551-28678570 Msa1322100:three_prime_UTR 40.0%
TTACTCCTGCTGTTAATTGG+AGG - chr8_4:28684853-28684872 Msa1322100:intron 40.0%
TACTCCTGCTGTTAATTGGA+GGG - chr8_4:28684854-28684873 Msa1322100:intron 40.0%
GAGGACCCATAACACAATAA+AGG + chr8_4:28684884-28684903 None:intergenic 40.0%
AACCCTAACCTAAACTCACA+GGG - chr8_4:28685045-28685064 Msa1322100:intron 40.0%
TTCTTACTCCCTGTGAGTTT+AGG + chr8_4:28678912-28678931 None:intergenic 40.0%
CTCTTACAAGATCAACTTGG+TGG - chr8_4:28679318-28679337 Msa1322100:three_prime_UTR 40.0%
!!! CATCAACCCACTGATTTTCA+TGG + chr8_4:28679356-28679375 None:intergenic 40.0%
TACTCGAAAAACGCTATCGA+CGG + chr8_4:28685679-28685698 None:intergenic 40.0%
! CAGAAAGCAAATTTTGCAGC+TGG + chr8_4:28679735-28679754 None:intergenic 40.0%
! AGAGTTCTGGCACCAAAAAT+TGG - chr8_4:28680018-28680037 Msa1322100:three_prime_UTR 40.0%
AAGCATGCTACTGAAACTCT+TGG + chr8_4:28686125-28686144 None:intergenic 40.0%
TTGTAAACAGGAGGATTCTC+TGG + chr8_4:28680132-28680151 None:intergenic 40.0%
! AGAAACATCGGTTAAAGGCT+TGG - chr8_4:28686232-28686251 Msa1322100:CDS 40.0%
GTCTCACACTACTATGGAAA+AGG - chr8_4:28680174-28680193 Msa1322100:three_prime_UTR 40.0%
GATCACTTCAGAATTTAGGC+TGG - chr8_4:28686299-28686318 Msa1322100:intron 40.0%
CAGACTCATAAGACCAAGAT+TGG + chr8_4:28680340-28680359 None:intergenic 40.0%
GTATCCCTCCAATTAACAGC+TGG + chr8_4:28678719-28678738 None:intergenic 45.0%
AACCCTGACCTAAACTCACA+GGG - chr8_4:28678901-28678920 Msa1322100:intron 45.0%
AGGGCAAGGTGGGTAATAAT+GGG + chr8_4:28679241-28679260 None:intergenic 45.0%
!! CAAAAGTGAGTTCTGGCTCA+GGG + chr8_4:28679260-28679279 None:intergenic 45.0%
CTTGTGCCAAAAGTGAGTTC+TGG + chr8_4:28679267-28679286 None:intergenic 45.0%
GTTGATGTCACACCAATTCC+TGG - chr8_4:28679369-28679388 Msa1322100:three_prime_UTR 45.0%
! GTTTGATCTTGTTCTAGGCC+CGG + chr8_4:28679856-28679875 None:intergenic 45.0%
TGGCACCAAAAATTGGTCCA+CGG - chr8_4:28680025-28680044 Msa1322100:three_prime_UTR 45.0%
GGTGTGAGCAACTCTGTTAT+AGG + chr8_4:28680111-28680130 None:intergenic 45.0%
GATGCTTCCTTGTAAACAGG+AGG + chr8_4:28680141-28680160 None:intergenic 45.0%
!! GGAAGCATCAGTTAAAGGCT+TGG - chr8_4:28680152-28680171 Msa1322100:three_prime_UTR 45.0%
GATCACTTCAGAATTCAGGC+AGG - chr8_4:28680219-28680238 Msa1322100:three_prime_UTR 45.0%
GAAACTACATGACCCTCTTG+AGG - chr8_4:28680842-28680861 Msa1322100:intron 45.0%
! ATTATGTGAGTTGGGTCTCG+GGG + chr8_4:28680868-28680887 None:intergenic 45.0%
! GTTTGGTTCCACTTCTACAG+GGG - chr8_4:28681044-28681063 Msa1322100:intron 45.0%
! CGTATGATGGGGAGAAGATA+GGG + chr8_4:28681487-28681506 None:intergenic 45.0%
! TCGTATGATGGGGAGAAGAT+AGG + chr8_4:28681488-28681507 None:intergenic 45.0%
GATTCGAGACTCGTATGATG+GGG + chr8_4:28681498-28681517 None:intergenic 45.0%
!! AGGGCATGGTGGGTAATAAT+GGG + chr8_4:28681921-28681940 None:intergenic 45.0%
CCAATAGTCAATTCAGGCTC+AGG + chr8_4:28681941-28681960 None:intergenic 45.0%
CCTGAGCCTGAATTGACTAT+TGG - chr8_4:28681938-28681957 Msa1322100:intron 45.0%
CTGAGTAGAAGTAGAACCAC+AGG + chr8_4:28682162-28682181 None:intergenic 45.0%
AAGCATGCCACTGAAACTCT+TGG + chr8_4:28682290-28682309 None:intergenic 45.0%
! TTTCAGTGGCATGCTTTTGC+AGG - chr8_4:28682294-28682313 Msa1322100:intron 45.0%
!! ACCTTACAAGCCGGTTTTGT+GGG - chr8_4:28682835-28682854 Msa1322100:intron 45.0%
CTAAGACAACCCCACAAAAC+CGG + chr8_4:28682848-28682867 None:intergenic 45.0%
!! GCAGTTTTAGCAATTTGGGC+TGG + chr8_4:28682906-28682925 None:intergenic 45.0%
TGGTGGTATGCAATGTAAGG+TGG + chr8_4:28683348-28683367 None:intergenic 45.0%
GAGTGGTGGTATGCAATGTA+AGG + chr8_4:28683351-28683370 None:intergenic 45.0%
AATTGTCTAATGCCACACGG+AGG + chr8_4:28683378-28683397 None:intergenic 45.0%
CCGTGTGGCATTAGACAATT+TGG - chr8_4:28683378-28683397 Msa1322100:intron 45.0%
!! CCCATGTAAAAGGGAGTGTT+AGG - chr8_4:28684030-28684049 Msa1322100:intron 45.0%
!! GTAAAAGGGAGTGTTAGGTG+GGG - chr8_4:28684035-28684054 Msa1322100:intron 45.0%
AGCATGCAAGTGAAAAGTGG+GGG - chr8_4:28684670-28684689 Msa1322100:intron 45.0%
AAAGTGGGGGTTCTTTCAAG+TGG - chr8_4:28684683-28684702 Msa1322100:intron 45.0%
GTATCCCTCCAATTAACAGC+AGG + chr8_4:28678719-28678738 None:intergenic 45.0%
GAACCCTAACCTAAACTCAC+AGG - chr8_4:28685044-28685063 Msa1322100:intron 45.0%
! CTCCCTGTGAGTTTAGGTTA+GGG + chr8_4:28685050-28685069 None:intergenic 45.0%
! ACTCCCTGTGAGTTTAGGTT+AGG + chr8_4:28685051-28685070 None:intergenic 45.0%
AGGGCAAGGTGGGTAATAAT+GGG + chr8_4:28679241-28679260 None:intergenic 45.0%
!! CAAAAGTGAGTTCTGGCTCA+GGG + chr8_4:28679260-28679279 None:intergenic 45.0%
CTTACGCCAAAAGTGAGTTC+TGG + chr8_4:28685417-28685436 None:intergenic 45.0%
GTTGATGTCACACCAATTCC+TGG - chr8_4:28679369-28679388 Msa1322100:three_prime_UTR 45.0%
! AAGTTAACGACCAAAGTGCC+AGG + chr8_4:28685540-28685559 None:intergenic 45.0%
TGGCACTTTGGTCGTTAACT+TGG - chr8_4:28685539-28685558 Msa1322100:intron 45.0%
GGCACTTTGGTCGTTAACTT+GGG - chr8_4:28685540-28685559 Msa1322100:intron 45.0%
TAACTTGGGTGACATGATGC+AGG - chr8_4:28685554-28685573 Msa1322100:intron 45.0%
AGCGCTTAGAAACTTACCGT+TGG + chr8_4:28686072-28686091 None:intergenic 45.0%
!!! ATTCTAAATTATAAAATTTT+CGG - chr8_4:28680669-28680688 Msa1322100:intron 5.0%
!! AGTAATAATTTATTTAATAA+TGG + chr8_4:28681721-28681740 None:intergenic 5.0%
!! AACAAAATATAATATAAATT+TGG + chr8_4:28685960-28685979 None:intergenic 5.0%
GAACCCTGACCTAAACTCAC+AGG - chr8_4:28678900-28678919 Msa1322100:intron 50.0%
CTCCCTGTGAGTTTAGGTCA+GGG + chr8_4:28678906-28678925 None:intergenic 50.0%
ACTCCCTGTGAGTTTAGGTC+AGG + chr8_4:28678907-28678926 None:intergenic 50.0%
CAGGGCAAGGTGGGTAATAA+TGG + chr8_4:28679242-28679261 None:intergenic 50.0%
!! CCAAAAGTGAGTTCTGGCTC+AGG + chr8_4:28679261-28679280 None:intergenic 50.0%
! CCTGAGCCAGAACTCACTTT+TGG - chr8_4:28679258-28679277 Msa1322100:three_prime_UTR 50.0%
! AAGTTAACGACCAAAGCGCC+AGG + chr8_4:28679390-28679409 None:intergenic 50.0%
TGGCGCTTTGGTCGTTAACT+TGG - chr8_4:28679389-28679408 Msa1322100:three_prime_UTR 50.0%
GGCGCTTTGGTCGTTAACTT+GGG - chr8_4:28679390-28679409 Msa1322100:three_prime_UTR 50.0%
TAACTTGGGTGACGTGATGC+AGG - chr8_4:28679404-28679423 Msa1322100:three_prime_UTR 50.0%
GGCACCAAAAATTGGTCCAC+GGG - chr8_4:28680026-28680045 Msa1322100:three_prime_UTR 50.0%
! GACACCCGTGGACCAATTTT+TGG + chr8_4:28680033-28680052 None:intergenic 50.0%
! GGCTTGGTCTCACACTACTA+TGG - chr8_4:28680168-28680187 Msa1322100:three_prime_UTR 50.0%
GCAGTGCTAGTCGCAAACAT+AGG - chr8_4:28680726-28680745 Msa1322100:intron 50.0%
!! CAGGGCATGGTGGGTAATAA+TGG + chr8_4:28681922-28681941 None:intergenic 50.0%
!! GTAGATGTCACACCGATTCC+TGG - chr8_4:28682049-28682068 Msa1322100:intron 50.0%
ACGACCAAAACGCCAGGAAT+CGG + chr8_4:28682064-28682083 None:intergenic 50.0%
AGGTTAACGACCAAAACGCC+AGG + chr8_4:28682070-28682089 None:intergenic 50.0%
!! GGCGTTTTGGTCGTTAACCT+CGG - chr8_4:28682070-28682089 Msa1322100:intron 50.0%
TAACCTCGGTGACATGATGC+AGG - chr8_4:28682084-28682103 Msa1322100:intron 50.0%
! AGAGTTCTGGCGCAAAGCAT+CGG - chr8_4:28682263-28682282 Msa1322100:intron 50.0%
CATCGGTCCAAGAGTTTCAG+TGG - chr8_4:28682280-28682299 Msa1322100:intron 50.0%
GGTGTGAGCAACTCTGCTAT+AGG + chr8_4:28682355-28682374 None:intergenic 50.0%
!! CACCTTACAAGCCGGTTTTG+TGG - chr8_4:28682834-28682853 Msa1322100:intron 50.0%
!! CCTTACAAGCCGGTTTTGTG+GGG - chr8_4:28682836-28682855 Msa1322100:intron 50.0%
!! CGGTTTTGTGGGGTTGTCTT+AGG - chr8_4:28682846-28682865 Msa1322100:intron 50.0%
CAAACTGTAGGCAGATCCTG+AGG + chr8_4:28684918-28684937 None:intergenic 50.0%
AGGATCTGCCTACAGTTTGC+AGG - chr8_4:28684919-28684938 Msa1322100:intron 50.0%
CAGGGCAAGGTGGGTAATAA+TGG + chr8_4:28679242-28679261 None:intergenic 50.0%
!! CCAAAAGTGAGTTCTGGCTC+AGG + chr8_4:28679261-28679280 None:intergenic 50.0%
! CCTGAGCCAGAACTCACTTT+TGG - chr8_4:28679258-28679277 Msa1322100:three_prime_UTR 50.0%
CACACCAATTCCTGGCACTT+TGG - chr8_4:28685527-28685546 Msa1322100:intron 50.0%
! ACGACCAAAGTGCCAGGAAT+TGG + chr8_4:28685534-28685553 None:intergenic 50.0%
AAGCGCTCAACACAGAGTTC+TGG - chr8_4:28686085-28686104 Msa1322100:CDS 50.0%
GGTGTGAGCAACTCAGGTAT+AGG + chr8_4:28686191-28686210 None:intergenic 50.0%
TTCTCTGGTGTGAGCAACTC+AGG + chr8_4:28680117-28680136 None:intergenic 50.0%
! GGCTTGGTCTCACACTACTA+TGG - chr8_4:28680168-28680187 Msa1322100:three_prime_UTR 50.0%
TCCTCAGCCTCTTGATCCTC+AGG - chr8_4:28678757-28678776 Msa1322100:intron 55.0%
TCCTGAGGATCAAGAGGCTG+AGG + chr8_4:28678761-28678780 None:intergenic 55.0%
GGCAGATCCTGAGGATCAAG+AGG + chr8_4:28678767-28678786 None:intergenic 55.0%
CACACCAATTCCTGGCGCTT+TGG - chr8_4:28679377-28679396 Msa1322100:three_prime_UTR 55.0%
! ACGACCAAAGCGCCAGGAAT+TGG + chr8_4:28679384-28679403 None:intergenic 55.0%
AAGCATGCTACTGACACCCG+TGG + chr8_4:28680045-28680064 None:intergenic 55.0%
ACTCCAGCAGCAGCGATAAC+AGG - chr8_4:28681003-28681022 Msa1322100:intron 55.0%
CTCCAGCAGCAGCGATAACA+GGG - chr8_4:28681004-28681023 Msa1322100:intron 55.0%
ATTCAGGCTCAGGGCATGGT+GGG + chr8_4:28681931-28681950 None:intergenic 55.0%
AATTCAGGCTCAGGGCATGG+TGG + chr8_4:28681932-28681951 None:intergenic 55.0%
GTCAATTCAGGCTCAGGGCA+TGG + chr8_4:28681935-28681954 None:intergenic 55.0%
!!! CACACCGATTCCTGGCGTTT+TGG - chr8_4:28682057-28682076 Msa1322100:intron 55.0%
CTACCTGCATCATGTCACCG+AGG + chr8_4:28682090-28682109 None:intergenic 55.0%
TTTGCAGGCAGCATCTTCCC+CGG - chr8_4:28682309-28682328 Msa1322100:intron 55.0%
!! CCCCACAAAACCGGCTTGTA+AGG + chr8_4:28682839-28682858 None:intergenic 55.0%
GAGTGTTAGGTGGGGTGATC+AGG - chr8_4:28684043-28684062 Msa1322100:intron 55.0%
TCCTCAGCCTCTTGATCCTC+AGG - chr8_4:28678757-28678776 Msa1322100:intron 55.0%
TCCTGAGGATCAAGAGGCTG+AGG + chr8_4:28678761-28678780 None:intergenic 55.0%
GGCAGATCCTGAGGATCAAG+AGG + chr8_4:28678767-28678786 None:intergenic 55.0%
CTTGGGTGACATGATGCAGG+TGG - chr8_4:28685557-28685576 Msa1322100:intron 55.0%
!! GTTCTGGCTCAGGGCAAGGT+GGG + chr8_4:28679251-28679270 None:intergenic 60.0%
!! AGTTCTGGCTCAGGGCAAGG+TGG + chr8_4:28679252-28679271 None:intergenic 60.0%
!! GTGAGTTCTGGCTCAGGGCA+AGG + chr8_4:28679255-28679274 None:intergenic 60.0%
CTCCCTGTTATCGCTGCTGC+TGG + chr8_4:28681009-28681028 None:intergenic 60.0%
! CACACGGAGGTGTAGAGTGG+TGG + chr8_4:28683365-28683384 None:intergenic 60.0%
CACCACTCTACACCTCCGTG+TGG - chr8_4:28683363-28683382 Msa1322100:intron 60.0%
! TGCCACACGGAGGTGTAGAG+TGG + chr8_4:28683368-28683387 None:intergenic 60.0%
!! GTTCTGGCTCAGGGCAAGGT+GGG + chr8_4:28679251-28679270 None:intergenic 60.0%
!! AGTTCTGGCTCAGGGCAAGG+TGG + chr8_4:28679252-28679271 None:intergenic 60.0%
!! GTGAGTTCTGGCTCAGGGCA+AGG + chr8_4:28679255-28679274 None:intergenic 60.0%
TGGGTCTCGGGGCCTCAAGA+GGG + chr8_4:28680857-28680876 None:intergenic 65.0%
TTGGGTCTCGGGGCCTCAAG+AGG + chr8_4:28680858-28680877 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 28678251 28686536 28678251 ID=Msa1322100;Name=Msa1322100
chr8_4 mRNA 28678251 28686536 28678251 ID=Msa1322100-mRNA-1;Parent=Msa1322100;Name=Msa1322100-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.5|0.4|1|0.25|0.2|5|1407|144
chr8_4 exon 28678251 28678725 28678251 ID=Msa1322100-mRNA-1:exon:9576;Parent=Msa1322100-mRNA-1
chr8_4 exon 28679212 28679523 28679212 ID=Msa1322100-mRNA-1:exon:9575;Parent=Msa1322100-mRNA-1
chr8_4 exon 28679847 28680472 28679847 ID=Msa1322100-mRNA-1:exon:9574;Parent=Msa1322100-mRNA-1
chr8_4 exon 28686066 28686295 28686066 ID=Msa1322100-mRNA-1:exon:9573;Parent=Msa1322100-mRNA-1
chr8_4 exon 28686338 28686536 28686338 ID=Msa1322100-mRNA-1:exon:9572;Parent=Msa1322100-mRNA-1
chr8_4 CDS 28686338 28686536 28686338 ID=Msa1322100-mRNA-1:cds;Parent=Msa1322100-mRNA-1
chr8_4 CDS 28686066 28686295 28686066 ID=Msa1322100-mRNA-1:cds;Parent=Msa1322100-mRNA-1
chr8_4 CDS 28680467 28680472 28680467 ID=Msa1322100-mRNA-1:cds;Parent=Msa1322100-mRNA-1
chr8_4 three_prime_UTR 28679847 28680466 28679847 ID=Msa1322100-mRNA-1:three_prime_utr;Parent=Msa1322100-mRNA-1
chr8_4 three_prime_UTR 28679212 28679523 28679212 ID=Msa1322100-mRNA-1:three_prime_utr;Parent=Msa1322100-mRNA-1
chr8_4 three_prime_UTR 28678251 28678725 28678251 ID=Msa1322100-mRNA-1:three_prime_utr;Parent=Msa1322100-mRNA-1
Gene Sequence

>Msa1322100

ATGGTGAACACAAACCTAGAAGAAATCAAACAAGACCATGAACATGTTTATGATCGACAGAAAGAGTTAAAGCTTCTTGATGAATCAAAAGAAGGTGTAAAAGGACTTGTAGATGCTGGTTTGACCAAAATCCCAAAGATTTTCATTCATGATAAGATTCATGAACATAACAACAAACAAACATGTTTAACCAACCTTAATTCAAGTTCACGTTTAGAGATAATTGAGAAAGTAAAGTATGCAAGTGAAAAGTGGGGTTTCTTTCAAGTGGTCAACCATGGTATTCCATCTACTGTTTTGGATGAAATGATTGATGGAGTGGTTAGGTTTCATGAACAAGACACTGAAGTGAAGAAAGAGTTTTATTCTCGTGATATTACTAAAAGAGCTTATTTTAATACCAATTTTGATTTGTATGTTACTCCAGCTACATAA
Protein sequence

>Msa1322100

MVNTNLEEIKQDHEHVYDRQKELKLLDESKEGVKGLVDAGLTKIPKIFIHDKIHEHNNKQTCLTNLNSSSRLEIIEKVKYASEKWGFFQVVNHGIPSTVLDEMIDGVVRFHEQDTEVKKEFYSRDITKRAYFNTNFDLYVTPAT*