Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798860 | sp|F4JQH3|AMPP1_ARATH | 68.129 | 684 | 175 | 6 | 1 | 682 | 1 | 643 | 0.0 | 967 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798860 | G7KC66 | 94.282 | 682 | 12 | 2 | 1 | 682 | 1 | 655 | 0.0 | 1318 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011250 | Msa0798860 | 0.801761 | 7.730017e-49 | -8.615850e-47 |
| Msa0012040 | Msa0798860 | 0.816466 | 5.451769e-52 | -8.615850e-47 |
| Msa0014710 | Msa0798860 | 0.800682 | 1.285076e-48 | -8.615850e-47 |
| Msa0015390 | Msa0798860 | 0.810901 | 9.152125e-51 | -8.615850e-47 |
| Msa0039330 | Msa0798860 | 0.824412 | 8.188014e-54 | -8.615850e-47 |
| Msa0055240 | Msa0798860 | 0.823425 | 1.394527e-53 | -8.615850e-47 |
| Msa0079400 | Msa0798860 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa0089360 | Msa0798860 | 0.812228 | 4.712653e-51 | -8.615850e-47 |
| Msa0095560 | Msa0798860 | 0.802478 | 5.504333e-49 | -8.615850e-47 |
| Msa0096450 | Msa0798860 | 0.842294 | 2.822729e-58 | -8.615850e-47 |
| Msa0102120 | Msa0798860 | 0.857160 | 1.971553e-62 | -8.615850e-47 |
| Msa0117770 | Msa0798860 | 0.803519 | 3.353956e-49 | -8.615850e-47 |
| Msa0607540 | Msa0798860 | 0.809779 | 1.598477e-50 | -8.615850e-47 |
| Msa0610430 | Msa0798860 | 0.803070 | 4.153907e-49 | -8.615850e-47 |
| Msa0621590 | Msa0798860 | 0.816888 | 4.384868e-52 | -8.615850e-47 |
| Msa0623070 | Msa0798860 | 0.813457 | 2.535339e-51 | -8.615850e-47 |
| Msa0632730 | Msa0798860 | 0.802554 | 5.308632e-49 | -8.615850e-47 |
| Msa0634700 | Msa0798860 | 0.823978 | 1.035035e-53 | -8.615850e-47 |
| Msa0647830 | Msa0798860 | 0.810676 | 1.024101e-50 | -8.615850e-47 |
| Msa0653490 | Msa0798860 | 0.851850 | 6.784406e-61 | -8.615850e-47 |
| Msa0657970 | Msa0798860 | 0.802327 | 5.914756e-49 | -8.615850e-47 |
| Msa0660300 | Msa0798860 | 0.838150 | 3.412223e-57 | -8.615850e-47 |
| Msa0663710 | Msa0798860 | 0.801972 | 6.997448e-49 | -8.615850e-47 |
| Msa0663920 | Msa0798860 | 0.826409 | 2.756204e-54 | -8.615850e-47 |
| Msa0672570 | Msa0798860 | 0.826337 | 2.867302e-54 | -8.615850e-47 |
| Msa0673460 | Msa0798860 | 0.821255 | 4.449977e-53 | -8.615850e-47 |
| Msa0678820 | Msa0798860 | 0.829432 | 5.164020e-55 | -8.615850e-47 |
| Msa0688070 | Msa0798860 | 0.815696 | 8.098711e-52 | -8.615850e-47 |
| Msa0690440 | Msa0798860 | 0.825492 | 4.550959e-54 | -8.615850e-47 |
| Msa0698360 | Msa0798860 | 0.808080 | 3.692304e-50 | -8.615850e-47 |
| Msa0703050 | Msa0798860 | 0.831690 | 1.446953e-55 | -8.615850e-47 |
| Msa0716530 | Msa0798860 | 0.802487 | 5.481351e-49 | -8.615850e-47 |
| Msa0717020 | Msa0798860 | 0.805653 | 1.203443e-49 | -8.615850e-47 |
| Msa0722070 | Msa0798860 | 0.810881 | 9.244519e-51 | -8.615850e-47 |
| Msa0724590 | Msa0798860 | 0.815571 | 8.633552e-52 | -8.615850e-47 |
| Msa0731180 | Msa0798860 | 0.821892 | 3.170936e-53 | -8.615850e-47 |
| Msa0743720 | Msa0798860 | 0.815775 | 7.777706e-52 | -8.615850e-47 |
| Msa0749930 | Msa0798860 | 0.831187 | 1.924728e-55 | -8.615850e-47 |
| Msa0753720 | Msa0798860 | 0.800353 | 1.499676e-48 | -8.615850e-47 |
| Msa0763400 | Msa0798860 | 0.813362 | 2.659472e-51 | -8.615850e-47 |
| Msa0764830 | Msa0798860 | 0.814754 | 1.311387e-51 | -8.615850e-47 |
| Msa0767080 | Msa0798860 | 0.806138 | 9.516571e-50 | -8.615850e-47 |
| Msa0773840 | Msa0798860 | 0.806243 | 9.043281e-50 | -8.615850e-47 |
| Msa0790510 | Msa0798860 | 0.813181 | 2.914877e-51 | -8.615850e-47 |
| Msa0798860 | Msa0803300 | 0.800216 | 1.598989e-48 | -8.615850e-47 |
| Msa0798860 | Msa0806200 | 0.804089 | 2.553184e-49 | -8.615850e-47 |
| Msa0798860 | Msa0807030 | 0.846795 | 1.735438e-59 | -8.615850e-47 |
| Msa0798860 | Msa0830420 | 0.839578 | 1.457077e-57 | -8.615850e-47 |
| Msa0798860 | Msa0832970 | 0.810365 | 1.195192e-50 | -8.615850e-47 |
| Msa0798860 | Msa0844570 | 0.828447 | 8.945055e-55 | -8.615850e-47 |
| Msa0798860 | Msa0878880 | 0.800714 | 1.265778e-48 | -8.615850e-47 |
| Msa0798860 | Msa0886330 | -0.812782 | 3.565640e-51 | -8.615850e-47 |
| Msa0798860 | Msa0897880 | 0.803653 | 3.145462e-49 | -8.615850e-47 |
| Msa0798860 | Msa0942070 | 0.813108 | 3.024339e-51 | -8.615850e-47 |
| Msa0798860 | Msa0944550 | 0.832594 | 8.646344e-56 | -8.615850e-47 |
| Msa0798860 | Msa0969520 | 0.807361 | 5.248703e-50 | -8.615850e-47 |
| Msa0798860 | Msa0982270 | 0.818467 | 1.930590e-52 | -8.615850e-47 |
| Msa0798860 | Msa1002480 | 0.806367 | 8.515326e-50 | -8.615850e-47 |
| Msa0798860 | Msa1014540 | 0.803189 | 3.926352e-49 | -8.615850e-47 |
| Msa0798860 | Msa1015790 | 0.808158 | 3.552951e-50 | -8.615850e-47 |
| Msa0798860 | Msa1026760 | 0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa0798860 | Msa1026790 | 0.801146 | 1.033448e-48 | -8.615850e-47 |
| Msa0798860 | Msa1030970 | 0.812815 | 3.505682e-51 | -8.615850e-47 |
| Msa0798860 | Msa1059570 | 0.820852 | 5.510495e-53 | -8.615850e-47 |
| Msa0798860 | Msa1074530 | 0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0798860 | Msa1075080 | -0.826729 | 2.312165e-54 | -8.615850e-47 |
| Msa0798860 | Msa1075220 | -0.827360 | 1.633339e-54 | -8.615850e-47 |
| Msa0798860 | Msa1082500 | 0.824230 | 9.035494e-54 | -8.615850e-47 |
| Msa0798860 | Msa1084260 | 0.802135 | 6.477524e-49 | -8.615850e-47 |
| Msa0798860 | Msa1085920 | 0.823563 | 1.295155e-53 | -8.615850e-47 |
| Msa0798860 | Msa1090260 | 0.857647 | 1.415474e-62 | -8.615850e-47 |
| Msa0798860 | Msa1100050 | 0.802085 | 6.631327e-49 | -8.615850e-47 |
| Msa0798860 | Msa1105450 | 0.808695 | 2.729739e-50 | -8.615850e-47 |
| Msa0798860 | Msa1116130 | -0.817938 | 2.543479e-52 | -8.615850e-47 |
| Msa0798860 | Msa1129550 | 0.817410 | 3.345415e-52 | -8.615850e-47 |
| Msa0798860 | Msa1129730 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0798860 | Msa1132970 | 0.820969 | 5.177613e-53 | -8.615850e-47 |
| Msa0798860 | Msa1139000 | -0.804035 | 2.620789e-49 | -8.615850e-47 |
| Msa0798860 | Msa1143270 | 0.979334 | 9.697522e-148 | -8.615850e-47 |
| Msa0798860 | Msa1148920 | 0.802627 | 5.127791e-49 | -8.615850e-47 |
| Msa0798860 | Msa1158670 | 0.839315 | 1.705467e-57 | -8.615850e-47 |
| Msa0798860 | Msa1162550 | -0.828345 | 9.467684e-55 | -8.615850e-47 |
| Msa0798860 | Msa1174040 | 0.829922 | 3.925637e-55 | -8.615850e-47 |
| Msa0798860 | Msa1186550 | 0.827908 | 1.206480e-54 | -8.615850e-47 |
| Msa0798860 | Msa1186950 | -0.808933 | 2.427842e-50 | -8.615850e-47 |
| Msa0798860 | Msa1199560 | 0.851098 | 1.107006e-60 | -8.615850e-47 |
| Msa0798860 | Msa1199620 | 0.824670 | 7.117646e-54 | -8.615850e-47 |
| Msa0798860 | Msa1205130 | 0.841064 | 5.958259e-58 | -8.615850e-47 |
| Msa0798860 | Msa1212940 | 0.819454 | 1.151483e-52 | -8.615850e-47 |
| Msa0798860 | Msa1223870 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0798860 | Msa1224480 | 0.813109 | 3.022542e-51 | -8.615850e-47 |
| Msa0798860 | Msa1229600 | 0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0798860 | Msa1230830 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
| Msa0798860 | Msa1233500 | 0.820677 | 6.046275e-53 | -8.615850e-47 |
| Msa0798860 | Msa1233890 | 0.826023 | 3.404623e-54 | -8.615850e-47 |
| Msa0798860 | Msa1239530 | 0.811361 | 7.275489e-51 | -8.615850e-47 |
| Msa0798860 | Msa1244610 | 0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0798860 | Msa1246500 | 0.829848 | 4.090263e-55 | -8.615850e-47 |
| Msa0798860 | Msa1255060 | 0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0798860 | Msa1263060 | 0.815922 | 7.213490e-52 | -8.615850e-47 |
| Msa0798860 | Msa1276440 | 0.803458 | 3.452932e-49 | -8.615850e-47 |
| Msa0798860 | Msa1279210 | 0.881394 | 2.488735e-70 | -8.615850e-47 |
| Msa0798860 | Msa1282580 | -0.806076 | 9.802955e-50 | -8.615850e-47 |
| Msa0798860 | Msa1295510 | 0.809483 | 1.850356e-50 | -8.615850e-47 |
| Msa0798860 | Msa1299960 | 0.813026 | 3.152122e-51 | -8.615850e-47 |
| Msa0798860 | Msa1306750 | 0.841737 | 3.963957e-58 | -8.615850e-47 |
| Msa0798860 | Msa1307740 | 0.811827 | 5.763129e-51 | -8.615850e-47 |
| Msa0798860 | Msa1314340 | 0.809251 | 2.075603e-50 | -8.615850e-47 |
| Msa0798860 | Msa1318990 | 0.803272 | 3.773986e-49 | -8.615850e-47 |
| Msa0798860 | Msa1321350 | 0.814867 | 1.237708e-51 | -8.615850e-47 |
| Msa0798860 | Msa1322100 | 0.803533 | 3.331531e-49 | -8.615850e-47 |
| Msa0798860 | Msa1322890 | 0.801491 | 8.779728e-49 | -8.615850e-47 |
| Msa0798860 | Msa1327550 | 0.801087 | 1.062482e-48 | -8.615850e-47 |
| Msa0798860 | Msa1328700 | 0.866248 | 3.275246e-65 | -8.615850e-47 |
| Msa0798860 | Msa1340650 | 0.812963 | 3.253929e-51 | -8.615850e-47 |
| Msa0798860 | Msa1359040 | 0.805738 | 1.154731e-49 | -8.615850e-47 |
| Msa0798860 | Msa1360060 | 0.836019 | 1.195963e-56 | -8.615850e-47 |
| Msa0798860 | Msa1368500 | 0.816702 | 4.826348e-52 | -8.615850e-47 |
| Msa0798860 | Msa1369530 | 0.818126 | 2.305928e-52 | -8.615850e-47 |
| Msa0798860 | Msa1372760 | 0.854728 | 1.014556e-61 | -8.615850e-47 |
| Msa0798860 | Msa1376760 | 0.820259 | 7.538413e-53 | -8.615850e-47 |
| Msa0798860 | Msa1384330 | 0.805112 | 1.562148e-49 | -8.615850e-47 |
| Msa0798860 | Msa1384350 | 0.802228 | 6.197918e-49 | -8.615850e-47 |
| Msa0798860 | Msa1392260 | 0.803881 | 2.820790e-49 | -8.615850e-47 |
| Msa0798860 | Msa1393040 | 0.814995 | 1.159856e-51 | -8.615850e-47 |
| Msa0798860 | Msa1393410 | 0.813969 | 1.955130e-51 | -8.615850e-47 |
| Msa0798860 | Msa1413840 | 0.813512 | 2.465198e-51 | -8.615850e-47 |
| Msa0798860 | Msa1427230 | 0.806474 | 8.084846e-50 | -8.615850e-47 |
| Msa0798860 | Msa1430680 | 0.805004 | 1.645356e-49 | -8.615850e-47 |
| Msa0798860 | Msa1435420 | 0.811519 | 6.721667e-51 | -8.615850e-47 |
| Msa0798860 | Msa1437680 | 0.833527 | 5.067974e-56 | -8.615850e-47 |
| Msa0798860 | Msa1441190 | 0.805627 | 1.218565e-49 | -8.615850e-47 |
| Msa0798860 | Msa1451620 | -0.839300 | 1.721210e-57 | -8.615850e-47 |
| Msa0798860 | Msa1458550 | 0.818688 | 1.720244e-52 | -8.615850e-47 |
| Msa0798860 | Msa1459950 | 0.806521 | 7.900970e-50 | -8.615850e-47 |
| Msa0798860 | Msa1460830 | 0.804755 | 1.855185e-49 | -8.615850e-47 |
| Msa0798860 | Msa1464940 | 0.821113 | 4.798971e-53 | -8.615850e-47 |
| Msa0122590 | Msa0798860 | 0.802238 | 6.167202e-49 | -8.615850e-47 |
| Msa0153830 | Msa0798860 | 0.801992 | 6.930742e-49 | -8.615850e-47 |
| Msa0159770 | Msa0798860 | 0.823816 | 1.129914e-53 | -8.615850e-47 |
| Msa0166870 | Msa0798860 | 0.829964 | 3.832414e-55 | -8.615850e-47 |
| Msa0170320 | Msa0798860 | 0.816718 | 4.787409e-52 | -8.615850e-47 |
| Msa0197130 | Msa0798860 | 0.855379 | 6.563021e-62 | -8.615850e-47 |
| Msa0206010 | Msa0798860 | 0.834311 | 3.225693e-56 | -8.615850e-47 |
| Msa0210450 | Msa0798860 | 0.827207 | 1.776818e-54 | -8.615850e-47 |
| Msa0220440 | Msa0798860 | 0.810712 | 1.005949e-50 | -8.615850e-47 |
| Msa0222340 | Msa0798860 | 0.817804 | 2.726309e-52 | -8.615850e-47 |
| Msa0223910 | Msa0798860 | 0.835870 | 1.304403e-56 | -8.615850e-47 |
| Msa0226890 | Msa0798860 | 0.824909 | 6.251310e-54 | -8.615850e-47 |
| Msa0233300 | Msa0798860 | 0.802826 | 4.666131e-49 | -8.615850e-47 |
| Msa0237310 | Msa0798860 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
| Msa0365490 | Msa0798860 | 0.800820 | 1.204385e-48 | -8.615850e-47 |
| Msa0376590 | Msa0798860 | 0.826256 | 2.996843e-54 | -8.615850e-47 |
| Msa0379640 | Msa0798860 | 0.848961 | 4.389721e-60 | -8.615850e-47 |
| Msa0381180 | Msa0798860 | 0.814246 | 1.698340e-51 | -8.615850e-47 |
| Msa0388840 | Msa0798860 | 0.827043 | 1.945701e-54 | -8.615850e-47 |
| Msa0389340 | Msa0798860 | 0.800165 | 1.638196e-48 | -8.615850e-47 |
| Msa0389810 | Msa0798860 | 0.815102 | 1.098014e-51 | -8.615850e-47 |
| Msa0397750 | Msa0798860 | 0.813320 | 2.716912e-51 | -8.615850e-47 |
| Msa0407930 | Msa0798860 | 0.801546 | 8.556126e-49 | -8.615850e-47 |
| Msa0420960 | Msa0798860 | 0.809898 | 1.506896e-50 | -8.615850e-47 |
| Msa0428930 | Msa0798860 | 0.842457 | 2.556081e-58 | -8.615850e-47 |
| Msa0431670 | Msa0798860 | 0.808850 | 2.529248e-50 | -8.615850e-47 |
| Msa0431690 | Msa0798860 | 0.817000 | 4.137075e-52 | -8.615850e-47 |
| Msa0436370 | Msa0798860 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0439970 | Msa0798860 | 0.808094 | 3.666636e-50 | -8.615850e-47 |
| Msa0442200 | Msa0798860 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0442850 | Msa0798860 | 0.819043 | 1.428980e-52 | -8.615850e-47 |
| Msa0458440 | Msa0798860 | 0.810314 | 1.226183e-50 | -8.615850e-47 |
| Msa0465680 | Msa0798860 | -0.807769 | 4.299237e-50 | -8.615850e-47 |
| Msa0467060 | Msa0798860 | 0.820076 | 8.300973e-53 | -8.615850e-47 |
| Msa0468130 | Msa0798860 | 0.805297 | 1.428759e-49 | -8.615850e-47 |
| Msa0475490 | Msa0798860 | 0.831860 | 1.313742e-55 | -8.615850e-47 |
| Msa0477130 | Msa0798860 | -0.808665 | 2.770637e-50 | -8.615850e-47 |
| Msa0249100 | Msa0798860 | 0.802775 | 4.780310e-49 | -8.615850e-47 |
| Msa0253200 | Msa0798860 | 0.818255 | 2.156048e-52 | -8.615850e-47 |
| Msa0263450 | Msa0798860 | 0.800664 | 1.296069e-48 | -8.615850e-47 |
| Msa0270100 | Msa0798860 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa0274730 | Msa0798860 | 0.808872 | 2.501234e-50 | -8.615850e-47 |
| Msa0276770 | Msa0798860 | 0.844546 | 7.068626e-59 | -8.615850e-47 |
| Msa0282250 | Msa0798860 | 0.808468 | 3.051628e-50 | -8.615850e-47 |
| Msa0287410 | Msa0798860 | 0.813053 | 3.108916e-51 | -8.615850e-47 |
| Msa0292030 | Msa0798860 | 0.820481 | 6.705717e-53 | -8.615850e-47 |
| Msa0294950 | Msa0798860 | 0.800756 | 1.241365e-48 | -8.615850e-47 |
| Msa0299580 | Msa0798860 | 0.821254 | 4.452487e-53 | -8.615850e-47 |
| Msa0315290 | Msa0798860 | 0.835124 | 2.013513e-56 | -8.615850e-47 |
| Msa0315530 | Msa0798860 | 0.804100 | 2.539862e-49 | -8.615850e-47 |
| Msa0326110 | Msa0798860 | 0.836892 | 7.171008e-57 | -8.615850e-47 |
| Msa0331920 | Msa0798860 | 0.801561 | 8.495281e-49 | -8.615850e-47 |
| Msa0339620 | Msa0798860 | 0.802853 | 4.605372e-49 | -8.615850e-47 |
| Msa0342100 | Msa0798860 | 0.801548 | 8.546700e-49 | -8.615850e-47 |
| Msa0344830 | Msa0798860 | 0.827609 | 1.423484e-54 | -8.615850e-47 |
| Msa0344910 | Msa0798860 | 0.806290 | 8.838757e-50 | -8.615850e-47 |
| Msa0344980 | Msa0798860 | 0.812827 | 3.484749e-51 | -8.615850e-47 |
| Msa0351810 | Msa0798860 | 0.821039 | 4.990796e-53 | -8.615850e-47 |
| Msa0358730 | Msa0798860 | 0.816983 | 4.173163e-52 | -8.615850e-47 |
| Msa0484780 | Msa0798860 | 0.802668 | 5.029081e-49 | -8.615850e-47 |
| Msa0488270 | Msa0798860 | 0.826541 | 2.563257e-54 | -8.615850e-47 |
| Msa0498230 | Msa0798860 | 0.817422 | 3.325810e-52 | -8.615850e-47 |
| Msa0502100 | Msa0798860 | 0.812016 | 5.241846e-51 | -8.615850e-47 |
| Msa0512750 | Msa0798860 | 0.802406 | 5.697240e-49 | -8.615850e-47 |
| Msa0516370 | Msa0798860 | 0.812033 | 5.195761e-51 | -8.615850e-47 |
| Msa0516440 | Msa0798860 | 0.809826 | 1.561636e-50 | -8.615850e-47 |
| Msa0538930 | Msa0798860 | 0.812010 | 5.256319e-51 | -8.615850e-47 |
| Msa0553460 | Msa0798860 | 0.807906 | 4.020030e-50 | -8.615850e-47 |
| Msa0555720 | Msa0798860 | 0.801531 | 8.615778e-49 | -8.615850e-47 |
| Msa0564510 | Msa0798860 | 0.805943 | 1.045946e-49 | -8.615850e-47 |
| Msa0576880 | Msa0798860 | 0.820119 | 8.115298e-53 | -8.615850e-47 |
| Msa0585700 | Msa0798860 | 0.807008 | 6.234574e-50 | -8.615850e-47 |
| Msa0587030 | Msa0798860 | 0.807736 | 4.368678e-50 | -8.615850e-47 |
| Msa0594560 | Msa0798860 | 0.800568 | 1.356070e-48 | -8.615850e-47 |
| Msa0598460 | Msa0798860 | 0.808909 | 2.456197e-50 | -8.615850e-47 |
| Msa0599770 | Msa0798860 | 0.803166 | 3.968511e-49 | -8.615850e-47 |
| Msa0599890 | Msa0798860 | 0.816741 | 4.728860e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798860 | MtrunA17_Chr5g0403661 | 94.282 | 682 | 12 | 2 | 1 | 682 | 1 | 655 | 0.0 | 1318 |
| Msa0798860 | MtrunA17_Chr7g0272831 | 41.921 | 687 | 325 | 12 | 5 | 680 | 85 | 708 | 9.76e-172 | 508 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0798860 | AT4G36760.1 | 68.129 | 684 | 175 | 6 | 1 | 682 | 1 | 643 | 0.0 | 967 |
| Msa0798860 | AT4G36760.2 | 67.936 | 683 | 176 | 6 | 1 | 681 | 1 | 642 | 0.0 | 964 |
| Msa0798860 | AT4G36760.3 | 68.135 | 681 | 174 | 6 | 1 | 679 | 1 | 640 | 0.0 | 962 |
| Msa0798860 | AT3G05350.1 | 41.787 | 694 | 323 | 13 | 3 | 681 | 81 | 708 | 5.65e-178 | 524 |
Find 149 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAAGTGTAGAGATATTT+TGG | 0.152849 | 5_3:-11836843 | Msa0798860:CDS |
| TTTACCATTTACACTCTTAT+TGG | 0.154825 | 5_3:+11840262 | None:intergenic |
| GGCTCTTCCAAAAGCTTTAA+AGG | 0.165533 | 5_3:-11840126 | Msa0798860:intron |
| ATTACACGAACCGTTCATTT+TGG | 0.170433 | 5_3:-11838084 | Msa0798860:CDS |
| GCTGATACAAAATTTAATTT+TGG | 0.176323 | 5_3:-11837114 | Msa0798860:CDS |
| ACAGTGTCTATTCCACAATT+TGG | 0.199796 | 5_3:-11836509 | Msa0798860:three_prime_UTR |
| GGTCCAAACAACTAAGAATT+TGG | 0.214787 | 5_3:-11841287 | Msa0798860:CDS |
| GAGCGACCAGCAAACTTTAA+TGG | 0.223509 | 5_3:+11841208 | None:intergenic |
| TCTTGTTTGGCTGGATAATA+AGG | 0.224940 | 5_3:-11839731 | Msa0798860:intron |
| TCAATCAACTTTGTTTGATA+TGG | 0.227519 | 5_3:+11836914 | None:intergenic |
| GTGCAGATGCAAGATATTTA+TGG | 0.252522 | 5_3:-11839567 | Msa0798860:intron |
| CATAAAAGTGTTAGGCAGTT+TGG | 0.259779 | 5_3:-11836576 | Msa0798860:three_prime_UTR |
| AAGCGTCGTGCATTTGTTTC+TGG | 0.263725 | 5_3:-11843327 | Msa0798860:CDS |
| ACCCCAATTGCTGCATCTTT+TGG | 0.266572 | 5_3:+11841382 | None:intergenic |
| GATACAACCTTTAAAGCTTT+TGG | 0.273131 | 5_3:+11840119 | None:intergenic |
| TACTATGAGGATGGAGCATT+TGG | 0.273192 | 5_3:-11837171 | Msa0798860:CDS |
| ATTTGTTCCATTAGGAAATC+TGG | 0.276108 | 5_3:+11837765 | None:intergenic |
| GAAACCAATAAGAGTGTAAA+TGG | 0.288012 | 5_3:-11840266 | Msa0798860:CDS |
| AAATTTCTCATTACATTGTT+TGG | 0.289295 | 5_3:-11836456 | None:intergenic |
| AGAATTTGGTTGATGAAGTA+TGG | 0.294148 | 5_3:-11841273 | Msa0798860:CDS |
| CAACCAAATTCTTAGTTGTT+TGG | 0.305808 | 5_3:+11841284 | None:intergenic |
| CCAGGTTAAAACTCATTTAG+AGG | 0.309613 | 5_3:-11840420 | Msa0798860:intron |
| CACATAAATGAAGGCAGAAT+TGG | 0.317466 | 5_3:+11840880 | None:intergenic |
| TAATGAATAATAGCTGCATT+TGG | 0.348101 | 5_3:+11838310 | None:intergenic |
| CTTCTGGATTTAGAAGGTTC+AGG | 0.349912 | 5_3:+11836891 | None:intergenic |
| CTAAAAGGTCACATTGCTTT+GGG | 0.351113 | 5_3:-11837793 | Msa0798860:CDS |
| CGAATTCCTTTGTGGAACTA+TGG | 0.353081 | 5_3:-11837607 | Msa0798860:CDS |
| TGCTGCAAGACAACTGCATC+AGG | 0.354118 | 5_3:+11840158 | None:intergenic |
| AAAAGAGTAGCAACCTCATA+TGG | 0.356024 | 5_3:-11840226 | Msa0798860:CDS |
| AAGATCCTGCTGTAGATATC+TGG | 0.357561 | 5_3:-11841901 | Msa0798860:CDS |
| GTAATACCATTTGTTCCATT+AGG | 0.358872 | 5_3:+11837757 | None:intergenic |
| CTTGTAGAACCCAGTGGAAT+TGG | 0.359955 | 5_3:-11839803 | Msa0798860:intron |
| TTGCCAAAAGATGCAGCAAT+TGG | 0.359971 | 5_3:-11841385 | Msa0798860:CDS |
| CTGTTGTGCAATATCTTGTT+TGG | 0.362186 | 5_3:-11839744 | Msa0798860:CDS |
| ATGGAACCGGTCACGGTATT+GGG | 0.364463 | 5_3:-11837570 | Msa0798860:CDS |
| CAGTGTCTATTCCACAATTT+GGG | 0.369710 | 5_3:-11836508 | Msa0798860:three_prime_UTR |
| CAAGATATTTATGGAGCATC+TGG | 0.369771 | 5_3:-11839558 | Msa0798860:CDS |
| AACTTGGTGCAGGTCCTAAA+AGG | 0.377166 | 5_3:-11837808 | Msa0798860:CDS |
| CCTAAAAGGTCACATTGCTT+TGG | 0.378868 | 5_3:-11837794 | Msa0798860:CDS |
| GGAAATGCCAGATTTCCTAA+TGG | 0.381839 | 5_3:-11837772 | Msa0798860:CDS |
| TTCTTTCTCGAATTCCTTTG+TGG | 0.385407 | 5_3:-11837615 | Msa0798860:CDS |
| CTATACCTTCATGGACATTC+AGG | 0.387469 | 5_3:+11837542 | None:intergenic |
| ACTAGCCTTGACAGTAGATA+TGG | 0.388692 | 5_3:+11840322 | None:intergenic |
| GTACAACCATTAAAGTTTGC+TGG | 0.395160 | 5_3:-11841214 | Msa0798860:CDS |
| CATGGAACCGGTCACGGTAT+TGG | 0.397688 | 5_3:-11837571 | Msa0798860:CDS |
| AACTGCATCAGGGTTCAGTT+TGG | 0.400775 | 5_3:+11840169 | None:intergenic |
| ATCTCTACACTTGGAATGAT+AGG | 0.403975 | 5_3:+11836850 | None:intergenic |
| TGGAGCATTTGGGATAAGAT+TGG | 0.408521 | 5_3:-11837160 | Msa0798860:CDS |
| CAATTCTGCCTTCATTTATG+TGG | 0.409103 | 5_3:-11840879 | Msa0798860:CDS |
| AATGAATAATAGCTGCATTT+GGG | 0.420593 | 5_3:+11838311 | None:intergenic |
| TGCCAAAAGATGCAGCAATT+GGG | 0.422496 | 5_3:-11841384 | Msa0798860:CDS |
| ATAGTTAAACTATACCTTCA+TGG | 0.424811 | 5_3:+11837533 | None:intergenic |
| CGGAGCGGAATAGAACAAAA+TGG | 0.426716 | 5_3:-11836538 | Msa0798860:three_prime_UTR |
| TTGCTCATCATAAAAGTGTT+AGG | 0.427248 | 5_3:-11836584 | Msa0798860:three_prime_UTR |
| GAAGGCATAGTCATCCCAAT+AGG | 0.430599 | 5_3:+11836638 | None:intergenic |
| CAATTGATACTGCTCAAAGA+TGG | 0.432499 | 5_3:-11841342 | Msa0798860:CDS |
| GCTGCTTGATTTGCTGAACT+TGG | 0.432505 | 5_3:-11837824 | Msa0798860:CDS |
| TGATTTGCTGAACTTGGTGC+AGG | 0.436564 | 5_3:-11837818 | Msa0798860:CDS |
| GGTTAAGAAAAGCCCATGTT+CGG | 0.439198 | 5_3:-11839777 | Msa0798860:CDS |
| AGTCACCTCAGTCAATTTCA+AGG | 0.442633 | 5_3:+11838927 | None:intergenic |
| TGTGCAATATCTTGTTTGGC+TGG | 0.445934 | 5_3:-11839740 | Msa0798860:CDS |
| CTTAACCCATCCAATTCCAC+TGG | 0.448404 | 5_3:+11839793 | None:intergenic |
| GTGTGTTTGTAGTATCTAGA+TGG | 0.449399 | 5_3:-11838117 | Msa0798860:intron |
| GGGCCTACTGAGGAAATAGT+AGG | 0.450033 | 5_3:+11838331 | None:intergenic |
| TCTGGATTCACTGGAAGTGC+TGG | 0.452268 | 5_3:-11843309 | Msa0798860:intron |
| CAAAGGATGAAGCACTGCTT+TGG | 0.456478 | 5_3:-11841994 | Msa0798860:CDS |
| ATAGCAAATGCGTGAACAAC+AGG | 0.460986 | 5_3:+11840911 | None:intergenic |
| AGATTTCCTAATGGAACAAA+TGG | 0.462309 | 5_3:-11837763 | Msa0798860:intron |
| CAGCAATTGGGGTTGACCCT+TGG | 0.465455 | 5_3:-11841372 | Msa0798860:CDS |
| CACGCTGTATGCTAATTTGA+AGG | 0.470584 | 5_3:+11836620 | None:intergenic |
| GTTAAGAAAAGCCCATGTTC+GGG | 0.471059 | 5_3:-11839776 | Msa0798860:CDS |
| TCCTTCTGAAGATTATCATC+AGG | 0.471247 | 5_3:-11843499 | Msa0798860:intron |
| CAGCCGCACCATCCCGAACA+TGG | 0.478470 | 5_3:+11839764 | None:intergenic |
| GCATTTGTTTCTGGATTCAC+TGG | 0.478804 | 5_3:-11843318 | Msa0798860:CDS |
| TTCCCTACTATTTCCTCAGT+AGG | 0.480887 | 5_3:-11838334 | Msa0798860:CDS |
| TGTCTTGCAGCAATCACCTC+TGG | 0.487228 | 5_3:-11840147 | Msa0798860:CDS |
| TTCCAGAAAACAGCAGAAGC+TGG | 0.492040 | 5_3:-11841308 | Msa0798860:CDS |
| GTCATCCAATACAGGTTGCT+TGG | 0.492637 | 5_3:-11840970 | Msa0798860:intron |
| CTTGATTATCGACATGGAAC+CGG | 0.493586 | 5_3:-11837583 | Msa0798860:CDS |
| ACTATGAGGATGGAGCATTT+GGG | 0.498108 | 5_3:-11837170 | Msa0798860:CDS |
| AGAGCATAACAGCATGAAGC+TGG | 0.501145 | 5_3:+11840197 | None:intergenic |
| TCGCTTGTCCACATAAATGA+AGG | 0.507917 | 5_3:+11840871 | None:intergenic |
| TAGAACCCAGTGGAATTGGA+TGG | 0.510762 | 5_3:-11839799 | Msa0798860:CDS |
| TTCAGAACCTGGTTACTATG+AGG | 0.511196 | 5_3:-11837184 | Msa0798860:intron |
| AACACAGCTCACACAGCTAC+AGG | 0.512117 | 5_3:+11836770 | None:intergenic |
| AATTGATACTGCTCAAAGAT+GGG | 0.512479 | 5_3:-11841341 | Msa0798860:CDS |
| GAGACCTTCGGATCATGAAA+AGG | 0.512831 | 5_3:-11838061 | Msa0798860:CDS |
| AAGCTGGATCAGCCCATATG+AGG | 0.522455 | 5_3:+11840213 | None:intergenic |
| GCCAAAAGATGCAGCAATTG+GGG | 0.529055 | 5_3:-11841383 | Msa0798860:CDS |
| ACGGCAGCATTAATTTCTGC+AGG | 0.534012 | 5_3:+11841238 | None:intergenic |
| AGCCCATGTTCGGGATGGTG+CGG | 0.537007 | 5_3:-11839767 | Msa0798860:CDS |
| GCTTGGCTGTATAATATTCG+TGG | 0.537072 | 5_3:-11840953 | Msa0798860:CDS |
| TATCGACATGGAACCGGTCA+CGG | 0.540108 | 5_3:-11837577 | Msa0798860:CDS |
| TTTGAGAAATAAGCTTGCAC+AGG | 0.543705 | 5_3:-11841164 | Msa0798860:CDS |
| CAAGCGAAAGGTGTCTATTG+AGG | 0.547410 | 5_3:-11840855 | Msa0798860:intron |
| AGAATTTCGAGCATCAAAAG+AGG | 0.549148 | 5_3:-11838887 | Msa0798860:CDS |
| AGCCAAAATATCTCTACACT+TGG | 0.549514 | 5_3:+11836841 | None:intergenic |
| GAAGCACTGCTTTGGACCGA+TGG | 0.555358 | 5_3:-11841986 | Msa0798860:CDS |
| TTCGAGAAAGAATATCAAGT+TGG | 0.559945 | 5_3:+11837626 | None:intergenic |
| AAAGAGTAGCAACCTCATAT+GGG | 0.564283 | 5_3:-11840225 | Msa0798860:CDS |
| TTTGGATTTGCTAAAACGAA+CGG | 0.564835 | 5_3:-11836558 | Msa0798860:three_prime_UTR |
| CGGAATAGAACAAAATGGAA+TGG | 0.565969 | 5_3:-11836533 | Msa0798860:three_prime_UTR |
| AAAACTCATTTAGAGGAGAA+CGG | 0.567620 | 5_3:-11840413 | Msa0798860:CDS |
| TATCGTTTGAGCATATTACC+TGG | 0.570260 | 5_3:-11837077 | Msa0798860:CDS |
| CATTTATGTGGACAAGCGAA+AGG | 0.571196 | 5_3:-11840867 | Msa0798860:CDS |
| ATTCTGAAACTGATTAAATG+AGG | 0.576925 | 5_3:+11837411 | None:intergenic |
| ATCGTTTGAGCATATTACCT+GGG | 0.578375 | 5_3:-11837076 | Msa0798860:intron |
| GCCATCCAGATATCTACAGC+AGG | 0.578581 | 5_3:+11841896 | None:intergenic |
| AGCCGCACCATCCCGAACAT+GGG | 0.579490 | 5_3:+11839765 | None:intergenic |
| GAACCTGGTTACTATGAGGA+TGG | 0.579953 | 5_3:-11837180 | Msa0798860:CDS |
| AGGTTTGGCACTTATAACAA+AGG | 0.585242 | 5_3:-11842011 | Msa0798860:CDS |
| GTAGGACCCAATACCGTGAC+CGG | 0.585651 | 5_3:+11837564 | None:intergenic |
| AGAACCCAGTGGAATTGGAT+GGG | 0.592752 | 5_3:-11839798 | Msa0798860:CDS |
| ACCTGATGATAATCTTCAGA+AGG | 0.595850 | 5_3:+11843498 | None:intergenic |
| GGCCTACTGAGGAAATAGTA+GGG | 0.603464 | 5_3:+11838332 | None:intergenic |
| AACAACAACTTAGTGATCAG+TGG | 0.603882 | 5_3:-11841943 | Msa0798860:CDS |
| TAATATTCGTGGAAAAGATG+TGG | 0.605682 | 5_3:-11840942 | Msa0798860:CDS |
| GCAGCATTAATTTCTGCAGG+TGG | 0.606074 | 5_3:+11841241 | None:intergenic |
| TCACACAGCTACAGGTTCTG+TGG | 0.607304 | 5_3:+11836778 | None:intergenic |
| CTAACCGTCGGTAACAGTCA+TGG | 0.608781 | 5_3:+11837365 | None:intergenic |
| CTGCAGAAAATAACGTCCAT+CGG | 0.614375 | 5_3:+11841970 | None:intergenic |
| TTAACCCATCCAATTCCACT+GGG | 0.614706 | 5_3:+11839794 | None:intergenic |
| CGAAGGTCTCCCAAAATGAA+CGG | 0.616371 | 5_3:+11838074 | None:intergenic |
| TATGGTCTTGATTATCGACA+TGG | 0.627608 | 5_3:-11837589 | Msa0798860:CDS |
| TCCTGCTGTAGATATCTGGA+TGG | 0.628115 | 5_3:-11841897 | Msa0798860:CDS |
| TACAGAAGTAAGCTTAGATG+CGG | 0.629352 | 5_3:-11840372 | Msa0798860:CDS |
| TCCTACCTGAATGTCCATGA+AGG | 0.631448 | 5_3:-11837547 | Msa0798860:intron |
| GCTCCATCCTCATAGTAACC+AGG | 0.632228 | 5_3:+11837177 | None:intergenic |
| TGATTCCATATCTACTGTCA+AGG | 0.633943 | 5_3:-11840327 | Msa0798860:CDS |
| TGGATGAAGCTGAAAATGCA+TGG | 0.635806 | 5_3:-11836811 | Msa0798860:CDS |
| ACAACTAAAGCATGAAGAGG+TGG | 0.636822 | 5_3:+11843522 | None:intergenic |
| AGAAAAGCCCATGTTCGGGA+TGG | 0.637022 | 5_3:-11839772 | Msa0798860:CDS |
| AGCTGCATTTGGGCCTACTG+AGG | 0.640424 | 5_3:+11838321 | None:intergenic |
| ACAGTCATGGAAGCTTGCAA+TGG | 0.640918 | 5_3:+11837378 | None:intergenic |
| ATCGAAACTCATCAGTTCAG+CGG | 0.645376 | 5_3:-11843620 | Msa0798860:five_prime_UTR |
| TATCAATTGAAATGCACCAA+GGG | 0.647183 | 5_3:+11841356 | None:intergenic |
| GGAACAACTAAAGCATGAAG+AGG | 0.648851 | 5_3:+11843519 | None:intergenic |
| CTTGCACAGGAGCATGCTCG+AGG | 0.658974 | 5_3:-11841151 | Msa0798860:CDS |
| AAACTTTAATGGTTGTACAA+CGG | 0.664517 | 5_3:+11841219 | None:intergenic |
| GCTGCAAGACAACTGCATCA+GGG | 0.675527 | 5_3:+11840159 | None:intergenic |
| TCAAGACCATAGTTCCACAA+AGG | 0.676845 | 5_3:+11837601 | None:intergenic |
| GCTTCCATGACTGTTACCGA+CGG | 0.680223 | 5_3:-11837369 | Msa0798860:intron |
| TTATTGCTTGTAGAACCCAG+TGG | 0.692009 | 5_3:-11839809 | Msa0798860:intron |
| TGAAAAGGCTTGTTATACAG+CGG | 0.693773 | 5_3:-11838046 | Msa0798860:intron |
| GAAGTCCTTGAAATTGACTG+AGG | 0.707917 | 5_3:-11838932 | Msa0798860:CDS |
| ACCTTCATGGACATTCAGGT+AGG | 0.711577 | 5_3:+11837546 | None:intergenic |
| GTATCAATTGAAATGCACCA+AGG | 0.717415 | 5_3:+11841355 | None:intergenic |
| ATTTGCTAAAACGAACGGAG+CGG | 0.719824 | 5_3:-11836553 | Msa0798860:three_prime_UTR |
| GAATGTGCTTGTTATCAATG+AGG | 0.735864 | 5_3:-11837136 | Msa0798860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATCATATATTAATTTA+GGG | - | chr5_3:11836910-11836929 | Msa0798860:CDS | 10.0% |
| !!! | TTTTCATTTTCTTATTAAAA+TGG | - | chr5_3:11838109-11838128 | Msa0798860:intron | 10.0% |
| !! | CTATATTATATACATATTTA+AGG | + | chr5_3:11839525-11839544 | None:intergenic | 10.0% |
| !!! | ATAAAAGTTTTTTAAGATAA+GGG | + | chr5_3:11840276-11840295 | None:intergenic | 10.0% |
| !!! | TATAAAAGTTTTTTAAGATA+AGG | + | chr5_3:11840277-11840296 | None:intergenic | 10.0% |
| !!! | TCTAGATATATTTAATTTTT+TGG | - | chr5_3:11840461-11840480 | Msa0798860:intron | 10.0% |
| !!! | TTTATTTTTACTTTTCTTAA+TGG | - | chr5_3:11841056-11841075 | Msa0798860:intron | 10.0% |
| !! | GTTGAATCATATATTAATTT+AGG | - | chr5_3:11836909-11836928 | Msa0798860:CDS | 15.0% |
| !! | ATTAGGTTTATATTTATTTC+TGG | - | chr5_3:11837826-11837845 | Msa0798860:CDS | 15.0% |
| !! | TATAAGTTTGAAAATGAATT+AGG | - | chr5_3:11837975-11837994 | Msa0798860:intron | 15.0% |
| !! | AAAAACAAGAAAGAAAAATA+TGG | + | chr5_3:11838093-11838112 | None:intergenic | 15.0% |
| !! | AAAATTAAAGATAAAACAAG+AGG | - | chr5_3:11838485-11838504 | Msa0798860:intron | 15.0% |
| !!! | AACTGTGATTTTTTTTTATA+TGG | - | chr5_3:11838702-11838721 | Msa0798860:intron | 15.0% |
| !!! | ACTGTGATTTTTTTTTATAT+GGG | - | chr5_3:11838703-11838722 | Msa0798860:intron | 15.0% |
| !! | ATTAAAAAACAAAACTGTAA+GGG | + | chr5_3:11839091-11839110 | None:intergenic | 15.0% |
| !! | AATTAAAAAACAAAACTGTA+AGG | + | chr5_3:11839092-11839111 | None:intergenic | 15.0% |
| !! | AAAAAAATTAGCATGAAAAA+GGG | + | chr5_3:11839143-11839162 | None:intergenic | 15.0% |
| !! | AAAAAAAATTAGCATGAAAA+AGG | + | chr5_3:11839144-11839163 | None:intergenic | 15.0% |
| !!! | ATTGGAAATTTTGAAATAAA+GGG | + | chr5_3:11839395-11839414 | None:intergenic | 15.0% |
| !! | TGTATATAATATAGTAAGAA+TGG | - | chr5_3:11839531-11839550 | Msa0798860:CDS | 15.0% |
| !!! | TATATTTAATTTTTTGGATG+AGG | - | chr5_3:11840467-11840486 | Msa0798860:intron | 15.0% |
| !!! | ATATTTAATTTTTTGGATGA+GGG | - | chr5_3:11840468-11840487 | Msa0798860:intron | 15.0% |
| !!! | ATTTTTTCTTAATTTTCACA+AGG | + | chr5_3:11840924-11840943 | None:intergenic | 15.0% |
| !! | TGTGAAAATTAAGAAAAAAT+TGG | - | chr5_3:11840924-11840943 | Msa0798860:CDS | 15.0% |
| !!! | TTCATGAAAAATTTTATAGT+GGG | + | chr5_3:11840985-11841004 | None:intergenic | 15.0% |
| !!! | TTTCATGAAAAATTTTATAG+TGG | + | chr5_3:11840986-11841005 | None:intergenic | 15.0% |
| !!! | AAAATTTATCTTTTTGATTC+TGG | - | chr5_3:11841901-11841920 | Msa0798860:CDS | 15.0% |
| !! | TTCAGAGAATAAATAAAATT+GGG | + | chr5_3:11842289-11842308 | None:intergenic | 15.0% |
| !!! | AATTTTATTTATTCTCTGAA+GGG | - | chr5_3:11842289-11842308 | Msa0798860:intron | 15.0% |
| !! | AGAAAAGATAAAAAGATAAA+TGG | + | chr5_3:11842856-11842875 | None:intergenic | 15.0% |
| !!! | CTTTTTTCAATTTATTTTAC+TGG | - | chr5_3:11842874-11842893 | Msa0798860:intron | 15.0% |
| !!! | ATAGATTTTAAATAACCTAT+TGG | - | chr5_3:11843495-11843514 | Msa0798860:intron | 15.0% |
| !!! | TAGATTTTAAATAACCTATT+GGG | - | chr5_3:11843496-11843515 | Msa0798860:intron | 15.0% |
| !! | TGATTCAACAAAAAAACAAA+AGG | + | chr5_3:11836898-11836917 | None:intergenic | 20.0% |
| !! | TTATATTTGTTTCAGTTTCT+AGG | - | chr5_3:11836946-11836965 | Msa0798860:intron | 20.0% |
| !! | ATACAAATATTCTGAATCTA+TGG | + | chr5_3:11837034-11837053 | None:intergenic | 20.0% |
| !! | TATAACCTAAAACGTAAATT+AGG | - | chr5_3:11837809-11837828 | Msa0798860:CDS | 20.0% |
| !!! | ATAAACCTAATTTACGTTTT+AGG | + | chr5_3:11837817-11837836 | None:intergenic | 20.0% |
| !! | TTAAAAAACAAAACTGTAAG+GGG | + | chr5_3:11839090-11839109 | None:intergenic | 20.0% |
| !!! | CAGTTTTGTTTTTTAATTAG+AGG | - | chr5_3:11839094-11839113 | Msa0798860:intron | 20.0% |
| !!! | CATTGGAAATTTTGAAATAA+AGG | + | chr5_3:11839396-11839415 | None:intergenic | 20.0% |
| !!! | ATATAATATAGTTCTATTGC+CGG | + | chr5_3:11839451-11839470 | None:intergenic | 20.0% |
| !! | GAAGATTAAGAATGATATAT+TGG | - | chr5_3:11839616-11839635 | Msa0798860:intron | 20.0% |
| !! | TTCAATTACATTGATACATA+TGG | - | chr5_3:11840155-11840174 | Msa0798860:CDS | 20.0% |
| !! | TCCTAAGATAATAAACTTAA+GGG | + | chr5_3:11840217-11840236 | None:intergenic | 20.0% |
| !! | TTCCTAAGATAATAAACTTA+AGG | + | chr5_3:11840218-11840237 | None:intergenic | 20.0% |
| !! | AACTCTATTAATTCATAAGT+GGG | - | chr5_3:11840724-11840743 | Msa0798860:intron | 20.0% |
| !! | TATTAATCATGTTAGAGTTT+AGG | + | chr5_3:11840885-11840904 | None:intergenic | 20.0% |
| !!! | ATTAAGTATTCTTTTCGATA+AGG | - | chr5_3:11841300-11841319 | Msa0798860:CDS | 20.0% |
| !!! | ATATAAATTTTCAGCTTTCT+GGG | + | chr5_3:11841425-11841444 | None:intergenic | 20.0% |
| !!! | AATATAAATTTTCAGCTTTC+TGG | + | chr5_3:11841426-11841445 | None:intergenic | 20.0% |
| !!! | TCAAAAAGATAAATTTTGTC+TGG | + | chr5_3:11841898-11841917 | None:intergenic | 20.0% |
| !! | GATATACTAAATGTTATAGA+AGG | + | chr5_3:11842242-11842261 | None:intergenic | 20.0% |
| !! | AATAAATAAAATTGGGAATG+CGG | + | chr5_3:11842282-11842301 | None:intergenic | 20.0% |
| !! | CTTCAGAGAATAAATAAAAT+TGG | + | chr5_3:11842290-11842309 | None:intergenic | 20.0% |
| !!! | CAATTTTATTTATTCTCTGA+AGG | - | chr5_3:11842288-11842307 | Msa0798860:intron | 20.0% |
| !!! | ATTTTATTTATTCTCTGAAG+GGG | - | chr5_3:11842290-11842309 | Msa0798860:intron | 20.0% |
| !!! | TATTACAAAGTTTTACTCTT+AGG | - | chr5_3:11842408-11842427 | Msa0798860:intron | 20.0% |
| !!! | ACCTACAAGAATTTTAAAAA+GGG | + | chr5_3:11842500-11842519 | None:intergenic | 20.0% |
| !! | ATAGAATCAAAATAAGGAAT+GGG | + | chr5_3:11842650-11842669 | None:intergenic | 20.0% |
| !! | AATAGAATCAAAATAAGGAA+TGG | + | chr5_3:11842651-11842670 | None:intergenic | 20.0% |
| !! | TCGAAAATAGAATCAAAATA+AGG | + | chr5_3:11842656-11842675 | None:intergenic | 20.0% |
| !!! | AACATTTGTTGACTTTTAAA+TGG | + | chr5_3:11842900-11842919 | None:intergenic | 20.0% |
| !! | CGATTATTCTTAATGTTATT+CGG | - | chr5_3:11842920-11842939 | Msa0798860:intron | 20.0% |
| !!! | GCTGATACAAAATTTAATTT+TGG | - | chr5_3:11843034-11843053 | Msa0798860:intron | 20.0% |
| !!! | AAATTTAATTTTGGCGATAA+AGG | - | chr5_3:11843043-11843062 | Msa0798860:intron | 20.0% |
| !!! | GGATATTTTTATGTTTATGA+TGG | - | chr5_3:11843661-11843680 | Msa0798860:five_prime_UTR | 20.0% |
| ! | CTGAAGCAAAACAAAAAAAA+TGG | - | chr5_3:11836559-11836578 | Msa0798860:three_prime_UTR | 25.0% |
| !!! | AAAAGGTATCATAAAGCTTA+TGG | + | chr5_3:11836881-11836900 | None:intergenic | 25.0% |
| ! | CTTCAGCAGTTATAAATTAT+TGG | - | chr5_3:11836986-11837005 | Msa0798860:intron | 25.0% |
| ! | ATGCATAATACATGTCTATA+TGG | - | chr5_3:11837105-11837124 | Msa0798860:CDS | 25.0% |
| !! | ATGCTTTTGATCAAAAGTTT+CGG | - | chr5_3:11837488-11837507 | Msa0798860:intron | 25.0% |
| ! | AGTGAGTATCAGTAATAATA+AGG | + | chr5_3:11837549-11837568 | None:intergenic | 25.0% |
| !! | GTTGATAAAAGGTTTAGAAA+AGG | + | chr5_3:11837590-11837609 | None:intergenic | 25.0% |
| !! | TTCTAAACCTTTTATCAACT+AGG | - | chr5_3:11837591-11837610 | Msa0798860:CDS | 25.0% |
| !!! | TCTAATACCTAGTTGATAAA+AGG | + | chr5_3:11837601-11837620 | None:intergenic | 25.0% |
| !!! | TCAAGTTGAATAATTGGTTT+CGG | - | chr5_3:11837933-11837952 | Msa0798860:intron | 25.0% |
| ! | TTTGAAAATGAATTAGGCTT+TGG | - | chr5_3:11837981-11838000 | Msa0798860:intron | 25.0% |
| ! | TTCTTATTAAAATGGCATTC+AGG | - | chr5_3:11838117-11838136 | Msa0798860:intron | 25.0% |
| ! | CAACACTAAAGACAAAATTT+AGG | - | chr5_3:11838333-11838352 | Msa0798860:CDS | 25.0% |
| ! | TCAACACTAAAGACAAATTT+AGG | - | chr5_3:11838364-11838383 | Msa0798860:intron | 25.0% |
| ! | AAAGATAAAACAAGAGGATT+TGG | - | chr5_3:11838491-11838510 | Msa0798860:intron | 25.0% |
| !! | TTTTGGCAAATTCTAGTAAA+TGG | + | chr5_3:11838752-11838771 | None:intergenic | 25.0% |
| ! | AAACTTTAATGGTTGTACAA+CGG | + | chr5_3:11838932-11838951 | None:intergenic | 25.0% |
| !! | CAAAAGTACAAACTATTAAG+AGG | + | chr5_3:11839058-11839077 | None:intergenic | 25.0% |
| !! | ACCAATGAAAATTTTATTCG+TGG | - | chr5_3:11839564-11839583 | Msa0798860:CDS | 25.0% |
| !! | ACCACGAATAAAATTTTCAT+TGG | + | chr5_3:11839568-11839587 | None:intergenic | 25.0% |
| ! | TAAACTGAAGTTTATTTACG+TGG | - | chr5_3:11839593-11839612 | Msa0798860:intron | 25.0% |
| ! | AAACTGAAGTTTATTTACGT+GGG | - | chr5_3:11839594-11839613 | Msa0798860:intron | 25.0% |
| ! | GTTAATGATCTTTGTATCTT+CGG | - | chr5_3:11839654-11839673 | Msa0798860:intron | 25.0% |
| !!! | TAAAAATTGTGTTTTTTGCC+AGG | - | chr5_3:11839710-11839729 | Msa0798860:intron | 25.0% |
| ! | TTTACCATTTACACTCTTAT+TGG | + | chr5_3:11839889-11839908 | None:intergenic | 25.0% |
| !! | CAATCAAATGTCATTTGTAA+AGG | + | chr5_3:11840070-11840089 | None:intergenic | 25.0% |
| ! | TACAAATGACATTTGATTGT+TGG | - | chr5_3:11840071-11840090 | Msa0798860:intron | 25.0% |
| ! | TCCCTTAAGTTTATTATCTT+AGG | - | chr5_3:11840213-11840232 | Msa0798860:CDS | 25.0% |
| !! | TTTTCCTTTTTCCTTTGAAT+CGG | - | chr5_3:11840521-11840540 | Msa0798860:intron | 25.0% |
| ! | GAACTCTATTAATTCATAAG+TGG | - | chr5_3:11840723-11840742 | Msa0798860:intron | 25.0% |
| ! | ATTGGACTAACTAAAATATG+AGG | + | chr5_3:11840773-11840792 | None:intergenic | 25.0% |
| !!! | TTTACTTTTCTTAATGGTGA+TGG | - | chr5_3:11841062-11841081 | Msa0798860:intron | 25.0% |
| !! | TTACATGAAAGATTTTCCAA+GGG | + | chr5_3:11841121-11841140 | None:intergenic | 25.0% |
| !! | ATTACATGAAAGATTTTCCA+AGG | + | chr5_3:11841122-11841141 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGTTAAAATCTT+TGG | + | chr5_3:11841373-11841392 | None:intergenic | 25.0% |
| !!! | TTTTCAAATGGTTATTTCAG+AGG | + | chr5_3:11841386-11841405 | None:intergenic | 25.0% |
| !!! | ATTGAAACAGCTTTTTCAAA+TGG | + | chr5_3:11841398-11841417 | None:intergenic | 25.0% |
| ! | GAAAATGTAGTCAAATATGA+CGG | + | chr5_3:11841573-11841592 | None:intergenic | 25.0% |
| ! | AATGAATAATAGCTGCATTT+GGG | + | chr5_3:11841840-11841859 | None:intergenic | 25.0% |
| ! | TAATGAATAATAGCTGCATT+TGG | + | chr5_3:11841841-11841860 | None:intergenic | 25.0% |
| ! | TAAAATACACCAAAAGAGTA+AGG | + | chr5_3:11841975-11841994 | None:intergenic | 25.0% |
| !!! | CTTTTGGTGTATTTTAATCA+TGG | - | chr5_3:11841979-11841998 | Msa0798860:CDS | 25.0% |
| ! | AAATTATCAGTATACAGAAC+TGG | + | chr5_3:11842008-11842027 | None:intergenic | 25.0% |
| ! | ATAAATAAAATTGGGAATGC+GGG | + | chr5_3:11842281-11842300 | None:intergenic | 25.0% |
| !!! | TCCCTTTTTAAAATTCTTGT+AGG | - | chr5_3:11842496-11842515 | Msa0798860:intron | 25.0% |
| !!! | GACCTACAAGAATTTTAAAA+AGG | + | chr5_3:11842501-11842520 | None:intergenic | 25.0% |
| ! | ATAGTTAAACTATACCTTCA+TGG | + | chr5_3:11842618-11842637 | None:intergenic | 25.0% |
| !!! | ATTCTGAAACTGATTAAATG+AGG | + | chr5_3:11842740-11842759 | None:intergenic | 25.0% |
| !!! | TGTTATTCGGTTTTATTCAT+TGG | - | chr5_3:11842933-11842952 | Msa0798860:intron | 25.0% |
| !! | TCAATCAACTTTGTTTGATA+TGG | + | chr5_3:11843237-11843256 | None:intergenic | 25.0% |
| ! | TAAATCCAGAAGAGAAAAAT+TGG | - | chr5_3:11843268-11843287 | Msa0798860:intron | 25.0% |
| ! | CATAAAAATATCCCAAATTG+TGG | + | chr5_3:11843654-11843673 | None:intergenic | 25.0% |
| ! | TTATATCAGGTTGTTAGAGT+TGG | + | chr5_3:11837261-11837280 | None:intergenic | 30.0% |
| ATCAATCAAGTGGTTATATC+AGG | + | chr5_3:11837274-11837293 | None:intergenic | 30.0% | |
| TATGTATGTTTGTGCTTCAT+AGG | + | chr5_3:11837349-11837368 | None:intergenic | 30.0% | |
| TCAAACATTCCTTCTTAAGA+TGG | + | chr5_3:11837714-11837733 | None:intergenic | 30.0% | |
| AGATTCATGTATCTGTTGTT+TGG | - | chr5_3:11837757-11837776 | Msa0798860:intron | 30.0% | |
| CCAATTATTCAACTTGAGAA+AGG | + | chr5_3:11837930-11837949 | None:intergenic | 30.0% | |
| !! | CCTTTCTCAAGTTGAATAAT+TGG | - | chr5_3:11837927-11837946 | Msa0798860:intron | 30.0% |
| TTGAGAGTGAATCAAATATG+AGG | + | chr5_3:11838051-11838070 | None:intergenic | 30.0% | |
| CATATTTGATTCACTCTCAA+TGG | - | chr5_3:11838051-11838070 | Msa0798860:CDS | 30.0% | |
| AAAATATGGATGCATTCCAT+AGG | + | chr5_3:11838079-11838098 | None:intergenic | 30.0% | |
| ! | ATTAAAATGGCATTCAGGTT+TGG | - | chr5_3:11838122-11838141 | Msa0798860:intron | 30.0% |
| AAGGCACATATGTCAAAATA+GGG | - | chr5_3:11838541-11838560 | Msa0798860:intron | 30.0% | |
| TATCAATTGAAATGCACCAA+GGG | + | chr5_3:11838795-11838814 | None:intergenic | 30.0% | |
| AATTGATACTGCTCAAAGAT+GGG | - | chr5_3:11838807-11838826 | Msa0798860:intron | 30.0% | |
| CAACCAAATTCTTAGTTGTT+TGG | + | chr5_3:11838867-11838886 | None:intergenic | 30.0% | |
| !! | AGAATTTGGTTGATGAAGTA+TGG | - | chr5_3:11838875-11838894 | Msa0798860:CDS | 30.0% |
| TAATATTCGTGGAAAAGATG+TGG | - | chr5_3:11839206-11839225 | Msa0798860:intron | 30.0% | |
| ! | TTCTAAGAAAGACAAACAGT+CGG | + | chr5_3:11839357-11839376 | None:intergenic | 30.0% |
| ! | AGGTAGAAGAATTTTTGTCA+TGG | + | chr5_3:11839505-11839524 | None:intergenic | 30.0% |
| ! | ATATTGGCAGAGTTTTACTT+CGG | - | chr5_3:11839632-11839651 | Msa0798860:intron | 30.0% |
| AAAACTCATTTAGAGGAGAA+CGG | - | chr5_3:11839735-11839754 | Msa0798860:CDS | 30.0% | |
| ! | GAAACCAATAAGAGTGTAAA+TGG | - | chr5_3:11839882-11839901 | Msa0798860:intron | 30.0% |
| !!! | GATACAACCTTTAAAGCTTT+TGG | + | chr5_3:11840032-11840051 | None:intergenic | 30.0% |
| ACAACATTGCTTGATAGATT+AGG | - | chr5_3:11840128-11840147 | Msa0798860:CDS | 30.0% | |
| TGGATAATAAGGTTTGCATT+TGG | - | chr5_3:11840428-11840447 | Msa0798860:intron | 30.0% | |
| ! | TCAGATCTTGCTGTATAATT+TGG | + | chr5_3:11840547-11840566 | None:intergenic | 30.0% |
| AAATTATACAGCAAGATCTG+AGG | - | chr5_3:11840546-11840565 | Msa0798860:intron | 30.0% | |
| !!! | CAAAGGTTTCTCCTTTTTTA+CGG | + | chr5_3:11840636-11840655 | None:intergenic | 30.0% |
| TTTCTTAGGTAAGTCTACAT+TGG | + | chr5_3:11840791-11840810 | None:intergenic | 30.0% | |
| TGTAGACTTACCTAAGAAAT+AGG | - | chr5_3:11840792-11840811 | Msa0798860:intron | 30.0% | |
| ATTAGAGAGAGTTATTAGCA+TGG | - | chr5_3:11840835-11840854 | Msa0798860:intron | 30.0% | |
| AATTAAGAAAAAATTGGCCC+AGG | - | chr5_3:11840930-11840949 | Msa0798860:CDS | 30.0% | |
| GACAATATTCTTCTGATAGA+CGG | + | chr5_3:11841018-11841037 | None:intergenic | 30.0% | |
| ! | TCACAGAAGTTTTCAAACTA+TGG | - | chr5_3:11841190-11841209 | Msa0798860:CDS | 30.0% |
| ACAATAGAAACGAAGTTACA+AGG | - | chr5_3:11841649-11841668 | Msa0798860:intron | 30.0% | |
| CTCAAAGAAATATGAATGCA+TGG | - | chr5_3:11841694-11841713 | Msa0798860:intron | 30.0% | |
| AATGTATACTATACAGACCT+GGG | + | chr5_3:11841929-11841948 | None:intergenic | 30.0% | |
| TAATGTATACTATACAGACC+TGG | + | chr5_3:11841930-11841949 | None:intergenic | 30.0% | |
| ! | AATAGTGAACCTTACTCTTT+TGG | - | chr5_3:11841963-11841982 | Msa0798860:CDS | 30.0% |
| !!! | AGGAAGTGAGATTTTGATTT+GGG | - | chr5_3:11842171-11842190 | Msa0798860:intron | 30.0% |
| ! | AAATTATTCTCCCATCCTTT+TGG | - | chr5_3:11842206-11842225 | Msa0798860:intron | 30.0% |
| ATTTGTTCCATTAGGAAATC+TGG | + | chr5_3:11842386-11842405 | None:intergenic | 30.0% | |
| AGATTTCCTAATGGAACAAA+TGG | - | chr5_3:11842385-11842404 | Msa0798860:intron | 30.0% | |
| GTAATACCATTTGTTCCATT+AGG | + | chr5_3:11842394-11842413 | None:intergenic | 30.0% | |
| TCTTAGGTGTCAAATTCTTT+GGG | - | chr5_3:11842424-11842443 | Msa0798860:intron | 30.0% | |
| TTCGAGAAAGAATATCAAGT+TGG | + | chr5_3:11842525-11842544 | None:intergenic | 30.0% | |
| TAATATCACATAACATGTGC+AGG | - | chr5_3:11842713-11842732 | Msa0798860:intron | 30.0% | |
| CAAAATCTAATACTAACCGT+CGG | + | chr5_3:11842798-11842817 | None:intergenic | 30.0% | |
| TAAAATGTCATCAAATGCTC+AGG | + | chr5_3:11843108-11843127 | None:intergenic | 30.0% | |
| !! | CATTTGATGACATTTTAACG+CGG | - | chr5_3:11843111-11843130 | Msa0798860:intron | 30.0% |
| !! | ATTTGATGACATTTTAACGC+GGG | - | chr5_3:11843112-11843131 | Msa0798860:intron | 30.0% |
| GTACTAATGTTATAGCATAG+CGG | + | chr5_3:11843160-11843179 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTCTGGATTTAGA+AGG | + | chr5_3:11843266-11843285 | None:intergenic | 30.0% |
| ! | TTCAACCAATTTTTCTCTTC+TGG | + | chr5_3:11843276-11843295 | None:intergenic | 30.0% |
| ! | TTCCAAGTGTAGAGATATTT+TGG | - | chr5_3:11843305-11843324 | Msa0798860:intron | 30.0% |
| !! | TTGCTCATCATAAAAGTGTT+AGG | - | chr5_3:11843564-11843583 | Msa0798860:CDS | 30.0% |
| !! | TTTGGATTTGCTAAAACGAA+CGG | - | chr5_3:11843590-11843609 | Msa0798860:exon | 30.0% |
| ! | TCCTTCTGAAGATTATCATC+AGG | - | chr5_3:11836649-11836668 | Msa0798860:three_prime_UTR | 35.0% |
| ACCTGATGATAATCTTCAGA+AGG | + | chr5_3:11836653-11836672 | None:intergenic | 35.0% | |
| ATGATAAGCTGCTATGCTTA+TGG | - | chr5_3:11837292-11837311 | Msa0798860:intron | 35.0% | |
| !! | CTTTTGATCAAAAGCATGTC+TGG | + | chr5_3:11837485-11837504 | None:intergenic | 35.0% |
| CTAACAGACAAAGCAAAATC+AGG | + | chr5_3:11837635-11837654 | None:intergenic | 35.0% | |
| CTTCTTAAGATGGATCATGA+AGG | + | chr5_3:11837704-11837723 | None:intergenic | 35.0% | |
| CTTCATGATCCATCTTAAGA+AGG | - | chr5_3:11837702-11837721 | Msa0798860:intron | 35.0% | |
| !! | ATCTGTTGTTTGGTGTATGT+AGG | - | chr5_3:11837767-11837786 | Msa0798860:CDS | 35.0% |
| AGGTTTGGCACTTATAACAA+AGG | - | chr5_3:11838137-11838156 | Msa0798860:intron | 35.0% | |
| AACAACAACTTAGTGATCAG+TGG | - | chr5_3:11838205-11838224 | Msa0798860:intron | 35.0% | |
| TTAGGAGATGATGTTGTACA+TGG | - | chr5_3:11838382-11838401 | Msa0798860:intron | 35.0% | |
| TGTACATGGCATTGTTGATA+TGG | - | chr5_3:11838396-11838415 | Msa0798860:intron | 35.0% | |
| AAACAAGGAGAAGCTATTTG+TGG | + | chr5_3:11838425-11838444 | None:intergenic | 35.0% | |
| ! | CAAATAGCTTCTCCTTGTTT+AGG | - | chr5_3:11838425-11838444 | Msa0798860:intron | 35.0% |
| TTTGGAAGAGAACTATAGAG+AGG | - | chr5_3:11838509-11838528 | Msa0798860:intron | 35.0% | |
| ! | GAAGGCACATATGTCAAAAT+AGG | - | chr5_3:11838540-11838559 | Msa0798860:intron | 35.0% |
| ATTGTCTTGTCTTCATGTCT+AGG | + | chr5_3:11838611-11838630 | None:intergenic | 35.0% | |
| GTATCAATTGAAATGCACCA+AGG | + | chr5_3:11838796-11838815 | None:intergenic | 35.0% | |
| CAATTGATACTGCTCAAAGA+TGG | - | chr5_3:11838806-11838825 | Msa0798860:intron | 35.0% | |
| GGTCCAAACAACTAAGAATT+TGG | - | chr5_3:11838861-11838880 | Msa0798860:CDS | 35.0% | |
| GTACAACCATTAAAGTTTGC+TGG | - | chr5_3:11838934-11838953 | Msa0798860:CDS | 35.0% | |
| TTTGAGAAATAAGCTTGCAC+AGG | - | chr5_3:11838984-11839003 | Msa0798860:intron | 35.0% | |
| TATTCGATGTCATCCAATAC+AGG | - | chr5_3:11839170-11839189 | Msa0798860:intron | 35.0% | |
| CACATAAATGAAGGCAGAAT+TGG | + | chr5_3:11839271-11839290 | None:intergenic | 35.0% | |
| CAATTCTGCCTTCATTTATG+TGG | - | chr5_3:11839269-11839288 | Msa0798860:intron | 35.0% | |
| ! | GAACAAATTTGGAGCTAATG+AGG | + | chr5_3:11839332-11839351 | None:intergenic | 35.0% |
| TGATCTTTGTATCTTCGGAT+TGG | - | chr5_3:11839659-11839678 | Msa0798860:intron | 35.0% | |
| AATAAGCTGTGTTACCAAAG+TGG | + | chr5_3:11839691-11839710 | None:intergenic | 35.0% | |
| !! | CCTCTAAATGAGTTTTAACC+TGG | + | chr5_3:11839731-11839750 | None:intergenic | 35.0% |
| CCAGGTTAAAACTCATTTAG+AGG | - | chr5_3:11839728-11839747 | Msa0798860:intron | 35.0% | |
| TACAGAAGTAAGCTTAGATG+CGG | - | chr5_3:11839776-11839795 | Msa0798860:CDS | 35.0% | |
| TGATTCCATATCTACTGTCA+AGG | - | chr5_3:11839821-11839840 | Msa0798860:intron | 35.0% | |
| AAAAGAGTAGCAACCTCATA+TGG | - | chr5_3:11839922-11839941 | Msa0798860:intron | 35.0% | |
| AAAGAGTAGCAACCTCATAT+GGG | - | chr5_3:11839923-11839942 | Msa0798860:intron | 35.0% | |
| ATGGAAGACTGTATGAATGA+TGG | - | chr5_3:11840174-11840193 | Msa0798860:CDS | 35.0% | |
| CTGTTGTGCAATATCTTGTT+TGG | - | chr5_3:11840404-11840423 | Msa0798860:CDS | 35.0% | |
| ! | TCTTGTTTGGCTGGATAATA+AGG | - | chr5_3:11840417-11840436 | Msa0798860:CDS | 35.0% |
| ! | GTATAATTTGGCCGATTCAA+AGG | + | chr5_3:11840535-11840554 | None:intergenic | 35.0% |
| GTGCAGATGCAAGATATTTA+TGG | - | chr5_3:11840581-11840600 | Msa0798860:intron | 35.0% | |
| ! | CAAGATATTTATGGAGCATC+TGG | - | chr5_3:11840590-11840609 | Msa0798860:intron | 35.0% |
| TAGGACATTTCGTAATTGAG+AGG | + | chr5_3:11840866-11840885 | None:intergenic | 35.0% | |
| ! | AGAAGTTTTCAAACTATGGC+AGG | - | chr5_3:11841194-11841213 | Msa0798860:CDS | 35.0% |
| AGAATTTCGAGCATCAAAAG+AGG | - | chr5_3:11841261-11841280 | Msa0798860:CDS | 35.0% | |
| ACTATAAGCAACAGCTGAAA+CGG | + | chr5_3:11841493-11841512 | None:intergenic | 35.0% | |
| ! | ATCTGTTTTCAGCATTTCAG+AGG | - | chr5_3:11841784-11841803 | Msa0798860:intron | 35.0% |
| GTGTGTTTGTAGTATCTAGA+TGG | - | chr5_3:11842031-11842050 | Msa0798860:intron | 35.0% | |
| ! | ATTACACGAACCGTTCATTT+TGG | - | chr5_3:11842064-11842083 | Msa0798860:intron | 35.0% |
| ! | TTACACGAACCGTTCATTTT+GGG | - | chr5_3:11842065-11842084 | Msa0798860:intron | 35.0% |
| !! | TGAAAAGGCTTGTTATACAG+CGG | - | chr5_3:11842102-11842121 | Msa0798860:intron | 35.0% |
| AAAATCTCACTTCCTGTTGA+GGG | + | chr5_3:11842166-11842185 | None:intergenic | 35.0% | |
| !!! | CAGGAAGTGAGATTTTGATT+TGG | - | chr5_3:11842170-11842189 | Msa0798860:intron | 35.0% |
| CTAAAAGGTCACATTGCTTT+GGG | - | chr5_3:11842355-11842374 | Msa0798860:intron | 35.0% | |
| CTCTTAGGTGTCAAATTCTT+TGG | - | chr5_3:11842423-11842442 | Msa0798860:intron | 35.0% | |
| CTAAGTTCTCGTGTTTGAAA+TGG | + | chr5_3:11842468-11842487 | None:intergenic | 35.0% | |
| TTCTTTCTCGAATTCCTTTG+TGG | - | chr5_3:11842533-11842552 | Msa0798860:intron | 35.0% | |
| ! | TATGGTCTTGATTATCGACA+TGG | - | chr5_3:11842559-11842578 | Msa0798860:intron | 35.0% |
| !! | TTTTGTTATAGCCTGTGCTA+TGG | - | chr5_3:11842813-11842832 | Msa0798860:intron | 35.0% |
| !!! | TCGGTTTTATTCATTGGAAC+TGG | - | chr5_3:11842939-11842958 | Msa0798860:intron | 35.0% |
| !! | GAATGTGCTTGTTATCAATG+AGG | - | chr5_3:11843012-11843031 | Msa0798860:intron | 35.0% |
| TATCGTTTGAGCATATTACC+TGG | - | chr5_3:11843071-11843090 | Msa0798860:intron | 35.0% | |
| ATCGTTTGAGCATATTACCT+GGG | - | chr5_3:11843072-11843091 | Msa0798860:intron | 35.0% | |
| !! | TAGAATGTTGTTTCTCGTGT+AGG | - | chr5_3:11843209-11843228 | Msa0798860:intron | 35.0% |
| ATCTCTACACTTGGAATGAT+AGG | + | chr5_3:11843301-11843320 | None:intergenic | 35.0% | |
| AGCCAAAATATCTCTACACT+TGG | + | chr5_3:11843310-11843329 | None:intergenic | 35.0% | |
| !!! | AGATATTTTGGCTCCACATT+TGG | - | chr5_3:11843317-11843336 | Msa0798860:CDS | 35.0% |
| ! | TTTTCAGCTTCATCCAAATG+TGG | + | chr5_3:11843333-11843352 | None:intergenic | 35.0% |
| !! | CATAAAAGTGTTAGGCAGTT+TGG | - | chr5_3:11843572-11843591 | Msa0798860:CDS | 35.0% |
| CGGAATAGAACAAAATGGAA+TGG | - | chr5_3:11843615-11843634 | Msa0798860:five_prime_UTR | 35.0% | |
| ACAGTGTCTATTCCACAATT+TGG | - | chr5_3:11843639-11843658 | Msa0798860:five_prime_UTR | 35.0% | |
| CAGTGTCTATTCCACAATTT+GGG | - | chr5_3:11843640-11843659 | Msa0798860:five_prime_UTR | 35.0% | |
| ATCGAAACTCATCAGTTCAG+CGG | - | chr5_3:11836528-11836547 | Msa0798860:three_prime_UTR | 40.0% | |
| ACAACTAAAGCATGAAGAGG+TGG | + | chr5_3:11836629-11836648 | None:intergenic | 40.0% | |
| GGAACAACTAAAGCATGAAG+AGG | + | chr5_3:11836632-11836651 | None:intergenic | 40.0% | |
| !! | GCATTTGTTTCTGGATTCAC+TGG | - | chr5_3:11836830-11836849 | Msa0798860:CDS | 40.0% |
| GCAGCTTATCATCAATCAAG+TGG | + | chr5_3:11837284-11837303 | None:intergenic | 40.0% | |
| TTCACTCTCAATGGTTCCTA+TGG | - | chr5_3:11838060-11838079 | Msa0798860:CDS | 40.0% | |
| CTGCAGAAAATAACGTCCAT+CGG | + | chr5_3:11838181-11838200 | None:intergenic | 40.0% | |
| AAGATCCTGCTGTAGATATC+TGG | - | chr5_3:11838247-11838266 | Msa0798860:CDS | 40.0% | |
| AAAGCAAGCACAAACAACCT+TGG | + | chr5_3:11838457-11838476 | None:intergenic | 40.0% | |
| GAAGAGAACTATAGAGAGGT+GGG | - | chr5_3:11838513-11838532 | Msa0798860:intron | 40.0% | |
| TTGCCAAAAGATGCAGCAAT+TGG | - | chr5_3:11838763-11838782 | Msa0798860:intron | 40.0% | |
| TGCCAAAAGATGCAGCAATT+GGG | - | chr5_3:11838764-11838783 | Msa0798860:intron | 40.0% | |
| TGAAAAAGGGTGAACGTTTG+AGG | + | chr5_3:11839130-11839149 | None:intergenic | 40.0% | |
| GCTTGGCTGTATAATATTCG+TGG | - | chr5_3:11839195-11839214 | Msa0798860:intron | 40.0% | |
| ATAGCAAATGCGTGAACAAC+AGG | + | chr5_3:11839240-11839259 | None:intergenic | 40.0% | |
| TCGCTTGTCCACATAAATGA+AGG | + | chr5_3:11839280-11839299 | None:intergenic | 40.0% | |
| CATTTATGTGGACAAGCGAA+AGG | - | chr5_3:11839281-11839300 | Msa0798860:intron | 40.0% | |
| AACAGTCGGTGGAACAAATT+TGG | + | chr5_3:11839343-11839362 | None:intergenic | 40.0% | |
| TAAGAAAGACAAACAGTCGG+TGG | + | chr5_3:11839354-11839373 | None:intergenic | 40.0% | |
| !! | ACTAGCCTTGACAGTAGATA+TGG | + | chr5_3:11839829-11839848 | None:intergenic | 40.0% |
| ! | GGCTCTTCCAAAAGCTTTAA+AGG | - | chr5_3:11840022-11840041 | Msa0798860:intron | 40.0% |
| TTATTGCTTGTAGAACCCAG+TGG | - | chr5_3:11840339-11840358 | Msa0798860:CDS | 40.0% | |
| TTAACCCATCCAATTCCACT+GGG | + | chr5_3:11840357-11840376 | None:intergenic | 40.0% | |
| GGTTAAGAAAAGCCCATGTT+CGG | - | chr5_3:11840371-11840390 | Msa0798860:CDS | 40.0% | |
| GTTAAGAAAAGCCCATGTTC+GGG | - | chr5_3:11840372-11840391 | Msa0798860:CDS | 40.0% | |
| ! | TGTGCAATATCTTGTTTGGC+TGG | - | chr5_3:11840408-11840427 | Msa0798860:CDS | 40.0% |
| ! | TTGGCCGATTCAAAGGAAAA+AGG | + | chr5_3:11840528-11840547 | None:intergenic | 40.0% |
| !! | TGGAGCATCTGGATACTTTT+TGG | - | chr5_3:11840601-11840620 | Msa0798860:intron | 40.0% |
| !! | AGCATCTGGATACTTTTTGG+TGG | - | chr5_3:11840604-11840623 | Msa0798860:intron | 40.0% |
| TCACAAGAGGATGCTTACAA+AGG | + | chr5_3:11840653-11840672 | None:intergenic | 40.0% | |
| !! | ATGTTAGAGAGTGTCACAAG+AGG | + | chr5_3:11840666-11840685 | None:intergenic | 40.0% |
| GGTCCAATCAAATTGAGAGT+GGG | - | chr5_3:11840745-11840764 | Msa0798860:intron | 40.0% | |
| GATCCCACTCTCAATTTGAT+TGG | + | chr5_3:11840751-11840770 | None:intergenic | 40.0% | |
| ! | CATCACTGCTCCTATTTCTT+AGG | + | chr5_3:11840805-11840824 | None:intergenic | 40.0% |
| AAGAAAAAATTGGCCCAGGT+TGG | - | chr5_3:11840934-11840953 | Msa0798860:CDS | 40.0% | |
| ! | CCAAGGGTCTAATCATTTTC+AGG | + | chr5_3:11841105-11841124 | None:intergenic | 40.0% |
| CCTGAAAATGATTAGACCCT+TGG | - | chr5_3:11841102-11841121 | Msa0798860:intron | 40.0% | |
| GAAGTCCTTGAAATTGACTG+AGG | - | chr5_3:11841216-11841235 | Msa0798860:CDS | 40.0% | |
| AGTCACCTCAGTCAATTTCA+AGG | + | chr5_3:11841224-11841243 | None:intergenic | 40.0% | |
| GGTCACTACTTTCACAGAAT+GGG | + | chr5_3:11841468-11841487 | None:intergenic | 40.0% | |
| GAAAATGTGTGATTCCTGCA+TGG | + | chr5_3:11841538-11841557 | None:intergenic | 40.0% | |
| TTCCCTACTATTTCCTCAGT+AGG | - | chr5_3:11841814-11841833 | Msa0798860:intron | 40.0% | |
| ! | TCAGCACATTTTTCTGCTTC+TGG | + | chr5_3:11841868-11841887 | None:intergenic | 40.0% |
| !!! | TCCAAGTTTTTTCCCTCAAC+AGG | - | chr5_3:11842151-11842170 | Msa0798860:intron | 40.0% |
| TCCTGTTGAGGGAAAAAACT+TGG | + | chr5_3:11842155-11842174 | None:intergenic | 40.0% | |
| CAAAATCTCACTTCCTGTTG+AGG | + | chr5_3:11842167-11842186 | None:intergenic | 40.0% | |
| ! | CTTTTGCTAGCCAAAAGGAT+GGG | + | chr5_3:11842219-11842238 | None:intergenic | 40.0% |
| ! | CCAAAGCAATGTGACCTTTT+AGG | + | chr5_3:11842357-11842376 | None:intergenic | 40.0% |
| CCTAAAAGGTCACATTGCTT+TGG | - | chr5_3:11842354-11842373 | Msa0798860:intron | 40.0% | |
| GGAAATGCCAGATTTCCTAA+TGG | - | chr5_3:11842376-11842395 | Msa0798860:intron | 40.0% | |
| CGAATTCCTTTGTGGAACTA+TGG | - | chr5_3:11842541-11842560 | Msa0798860:intron | 40.0% | |
| TCAAGACCATAGTTCCACAA+AGG | + | chr5_3:11842550-11842569 | None:intergenic | 40.0% | |
| CTTGATTATCGACATGGAAC+CGG | - | chr5_3:11842565-11842584 | Msa0798860:intron | 40.0% | |
| CTATACCTTCATGGACATTC+AGG | + | chr5_3:11842609-11842628 | None:intergenic | 40.0% | |
| TTCAGAACCTGGTTACTATG+AGG | - | chr5_3:11842964-11842983 | Msa0798860:intron | 40.0% | |
| ! | TACTATGAGGATGGAGCATT+TGG | - | chr5_3:11842977-11842996 | Msa0798860:intron | 40.0% |
| ! | ACTATGAGGATGGAGCATTT+GGG | - | chr5_3:11842978-11842997 | Msa0798860:intron | 40.0% |
| ! | TGGAGCATTTGGGATAAGAT+TGG | - | chr5_3:11842988-11843007 | Msa0798860:intron | 40.0% |
| TGTCATCAAATGCTCAGGTT+AGG | + | chr5_3:11843103-11843122 | None:intergenic | 40.0% | |
| !! | ATTTTAACGCGGGTCAATAG+CGG | - | chr5_3:11843122-11843141 | Msa0798860:intron | 40.0% |
| ! | TGTTATAGCATAGCGGAACT+TGG | + | chr5_3:11843153-11843172 | None:intergenic | 40.0% |
| CTTCTGGATTTAGAAGGTTC+AGG | + | chr5_3:11843260-11843279 | None:intergenic | 40.0% | |
| TGGATGAAGCTGAAAATGCA+TGG | - | chr5_3:11843337-11843356 | Msa0798860:CDS | 40.0% | |
| CACGCTGTATGCTAATTTGA+AGG | + | chr5_3:11843531-11843550 | None:intergenic | 40.0% | |
| ! | ATTTGCTAAAACGAACGGAG+CGG | - | chr5_3:11843595-11843614 | Msa0798860:five_prime_UTR | 40.0% |
| ! | AAGCGTCGTGCATTTGTTTC+TGG | - | chr5_3:11836821-11836840 | Msa0798860:CDS | 45.0% |
| ! | TATCTGATACGTGTCGACGT+TGG | + | chr5_3:11837462-11837481 | None:intergenic | 45.0% |
| !! | CAAAGGATGAAGCACTGCTT+TGG | - | chr5_3:11838154-11838173 | Msa0798860:intron | 45.0% |
| !! | CGATGGACGTTATTTTCTGC+AGG | - | chr5_3:11838179-11838198 | Msa0798860:intron | 45.0% |
| TCCTGCTGTAGATATCTGGA+TGG | - | chr5_3:11838251-11838270 | Msa0798860:CDS | 45.0% | |
| GGAAGAGAACTATAGAGAGG+TGG | - | chr5_3:11838512-11838531 | Msa0798860:intron | 45.0% | |
| TATAGAGAGGTGGGAAGAGA+AGG | - | chr5_3:11838522-11838541 | Msa0798860:intron | 45.0% | |
| GCCAAAAGATGCAGCAATTG+GGG | - | chr5_3:11838765-11838784 | Msa0798860:intron | 45.0% | |
| ! | ACCCCAATTGCTGCATCTTT+TGG | + | chr5_3:11838769-11838788 | None:intergenic | 45.0% |
| TTCCAGAAAACAGCAGAAGC+TGG | - | chr5_3:11838840-11838859 | Msa0798860:intron | 45.0% | |
| GCAGCATTAATTTCTGCAGG+TGG | + | chr5_3:11838910-11838929 | None:intergenic | 45.0% | |
| ACGGCAGCATTAATTTCTGC+AGG | + | chr5_3:11838913-11838932 | None:intergenic | 45.0% | |
| GAGCGACCAGCAAACTTTAA+TGG | + | chr5_3:11838943-11838962 | None:intergenic | 45.0% | |
| GTCATCCAATACAGGTTGCT+TGG | - | chr5_3:11839178-11839197 | Msa0798860:intron | 45.0% | |
| TACAGCCAAGCAACCTGTAT+TGG | + | chr5_3:11839186-11839205 | None:intergenic | 45.0% | |
| !! | CAAGCGAAAGGTGTCTATTG+AGG | - | chr5_3:11839293-11839312 | Msa0798860:intron | 45.0% |
| AGGCTTCAGATGAGTAGCAT+TGG | + | chr5_3:11839413-11839432 | None:intergenic | 45.0% | |
| ! | ATGCTACTCATCTGAAGCCT+AGG | - | chr5_3:11839413-11839432 | Msa0798860:intron | 45.0% |
| ! | TGCTACTCATCTGAAGCCTA+GGG | - | chr5_3:11839414-11839433 | Msa0798860:intron | 45.0% |
| AGAGCATAACAGCATGAAGC+TGG | + | chr5_3:11839954-11839973 | None:intergenic | 45.0% | |
| AACTGCATCAGGGTTCAGTT+TGG | + | chr5_3:11839982-11840001 | None:intergenic | 45.0% | |
| !! | AAAGCTTTTGGAAGAGCCAG+AGG | + | chr5_3:11840020-11840039 | None:intergenic | 45.0% |
| CTTGTAGAACCCAGTGGAAT+TGG | - | chr5_3:11840345-11840364 | Msa0798860:CDS | 45.0% | |
| TAGAACCCAGTGGAATTGGA+TGG | - | chr5_3:11840349-11840368 | Msa0798860:CDS | 45.0% | |
| AGAACCCAGTGGAATTGGAT+GGG | - | chr5_3:11840350-11840369 | Msa0798860:CDS | 45.0% | |
| CTTAACCCATCCAATTCCAC+TGG | + | chr5_3:11840358-11840377 | None:intergenic | 45.0% | |
| ! | TACAGCAAGATCTGAGGTGT+CGG | - | chr5_3:11840552-11840571 | Msa0798860:intron | 45.0% |
| GGTGGAGAACACCGTAAAAA+AGG | - | chr5_3:11840622-11840641 | Msa0798860:intron | 45.0% | |
| GGGTCCAATCAAATTGAGAG+TGG | - | chr5_3:11840744-11840763 | Msa0798860:intron | 45.0% | |
| ACTGTCACAAATGCCAACCT+GGG | + | chr5_3:11840950-11840969 | None:intergenic | 45.0% | |
| !! | TGTCAAAGAAAGAGCACTCG+TGG | - | chr5_3:11841342-11841361 | Msa0798860:CDS | 45.0% |
| CGGTCACTACTTTCACAGAA+TGG | + | chr5_3:11841469-11841488 | None:intergenic | 45.0% | |
| TAAGCAACAGCTGAAACGGT+CGG | + | chr5_3:11841489-11841508 | None:intergenic | 45.0% | |
| AGATTCTGACCATACCATGC+AGG | - | chr5_3:11841521-11841540 | Msa0798860:intron | 45.0% | |
| TGTGTGATTCCTGCATGGTA+TGG | + | chr5_3:11841533-11841552 | None:intergenic | 45.0% | |
| GGCCTACTGAGGAAATAGTA+GGG | + | chr5_3:11841819-11841838 | None:intergenic | 45.0% | |
| !!! | TCTTTTTGATTCTGGAGCCC+AGG | - | chr5_3:11841909-11841928 | Msa0798860:CDS | 45.0% |
| CGAAGGTCTCCCAAAATGAA+CGG | + | chr5_3:11842077-11842096 | None:intergenic | 45.0% | |
| !! | CGTTCATTTTGGGAGACCTT+CGG | - | chr5_3:11842075-11842094 | Msa0798860:intron | 45.0% |
| GAGACCTTCGGATCATGAAA+AGG | - | chr5_3:11842087-11842106 | Msa0798860:intron | 45.0% | |
| ! | CAAGCCTTTTCATGATCCGA+AGG | + | chr5_3:11842094-11842113 | None:intergenic | 45.0% |
| ! | GCTTTTGCTAGCCAAAAGGA+TGG | + | chr5_3:11842220-11842239 | None:intergenic | 45.0% |
| ! | GAAGGCTTTTGCTAGCCAAA+AGG | + | chr5_3:11842224-11842243 | None:intergenic | 45.0% |
| !! | GCTGCTTGATTTGCTGAACT+TGG | - | chr5_3:11842324-11842343 | Msa0798860:intron | 45.0% |
| !! | TGATTTGCTGAACTTGGTGC+AGG | - | chr5_3:11842330-11842349 | Msa0798860:intron | 45.0% |
| !! | AACTTGGTGCAGGTCCTAAA+AGG | - | chr5_3:11842340-11842359 | Msa0798860:intron | 45.0% |
| TCCTACCTGAATGTCCATGA+AGG | - | chr5_3:11842601-11842620 | Msa0798860:intron | 45.0% | |
| ACCTTCATGGACATTCAGGT+AGG | + | chr5_3:11842605-11842624 | None:intergenic | 45.0% | |
| ACAGTCATGGAAGCTTGCAA+TGG | + | chr5_3:11842773-11842792 | None:intergenic | 45.0% | |
| AAATGGTGTGCCAATCCCAT+AGG | + | chr5_3:11842839-11842858 | None:intergenic | 45.0% | |
| !!! | TGGAACTGGTTTTCAGAACC+TGG | - | chr5_3:11842953-11842972 | Msa0798860:intron | 45.0% |
| GAACCTGGTTACTATGAGGA+TGG | - | chr5_3:11842968-11842987 | Msa0798860:intron | 45.0% | |
| ! | GAAGGCATAGTCATCCCAAT+AGG | + | chr5_3:11843513-11843532 | None:intergenic | 45.0% |
| CGGAGCGGAATAGAACAAAA+TGG | - | chr5_3:11843610-11843629 | Msa0798860:five_prime_UTR | 45.0% | |
| !! | ATTTATAAGATAAATTAATA+AGG | + | chr5_3:11837072-11837091 | None:intergenic | 5.0% |
| ! | TCTGGATTCACTGGAAGTGC+TGG | - | chr5_3:11836839-11836858 | Msa0798860:CDS | 50.0% |
| CACATGTGTCAGTGTTGTGC+CGG | - | chr5_3:11837433-11837452 | Msa0798860:intron | 50.0% | |
| GCCATCCAGATATCTACAGC+AGG | + | chr5_3:11838255-11838274 | None:intergenic | 50.0% | |
| CCTTGGTCAGCACCTAAACA+AGG | + | chr5_3:11838440-11838459 | None:intergenic | 50.0% | |
| !! | CCTTGTTTAGGTGCTGACCA+AGG | - | chr5_3:11838437-11838456 | Msa0798860:intron | 50.0% |
| TCAGCAGCAATTCATGGACG+AGG | + | chr5_3:11838651-11838670 | None:intergenic | 50.0% | |
| GTCCATGAATTGCTGCTGAG+TGG | - | chr5_3:11838652-11838671 | Msa0798860:intron | 50.0% | |
| GACCACTCAGCAGCAATTCA+TGG | + | chr5_3:11838657-11838676 | None:intergenic | 50.0% | |
| !!! | GACCAGCTTCTGCTGTTTTC+TGG | + | chr5_3:11838845-11838864 | None:intergenic | 50.0% |
| ! | GCCTAGGGCTGTAAAAGTAC+CGG | - | chr5_3:11839429-11839448 | Msa0798860:intron | 50.0% |
| ! | CGGATTGGAAGATGCCACTT+TGG | - | chr5_3:11839674-11839693 | Msa0798860:intron | 50.0% |
| AAGCTGGATCAGCCCATATG+AGG | + | chr5_3:11839938-11839957 | None:intergenic | 50.0% | |
| GCTGCAAGACAACTGCATCA+GGG | + | chr5_3:11839992-11840011 | None:intergenic | 50.0% | |
| TGCTGCAAGACAACTGCATC+AGG | + | chr5_3:11839993-11840012 | None:intergenic | 50.0% | |
| TGTCTTGCAGCAATCACCTC+TGG | - | chr5_3:11840001-11840020 | Msa0798860:intron | 50.0% | |
| AGAAAAGCCCATGTTCGGGA+TGG | - | chr5_3:11840376-11840395 | Msa0798860:CDS | 50.0% | |
| CACTGTCACAAATGCCAACC+TGG | + | chr5_3:11840951-11840970 | None:intergenic | 50.0% | |
| ! | CAGGTTGGCATTTGTGACAG+TGG | - | chr5_3:11840949-11840968 | Msa0798860:CDS | 50.0% |
| GGGCCTACTGAGGAAATAGT+AGG | + | chr5_3:11841820-11841839 | None:intergenic | 50.0% | |
| TATCGACATGGAACCGGTCA+CGG | - | chr5_3:11842571-11842590 | Msa0798860:intron | 50.0% | |
| ATGGAACCGGTCACGGTATT+GGG | - | chr5_3:11842578-11842597 | Msa0798860:intron | 50.0% | |
| GCTTCCATGACTGTTACCGA+CGG | - | chr5_3:11842779-11842798 | Msa0798860:intron | 50.0% | |
| CTAACCGTCGGTAACAGTCA+TGG | + | chr5_3:11842786-11842805 | None:intergenic | 50.0% | |
| ATAGCCTGTGCTATGGCCTA+TGG | - | chr5_3:11842820-11842839 | Msa0798860:intron | 50.0% | |
| TAGCCTGTGCTATGGCCTAT+GGG | - | chr5_3:11842821-11842840 | Msa0798860:intron | 50.0% | |
| AATCCCATAGGCCATAGCAC+AGG | + | chr5_3:11842827-11842846 | None:intergenic | 50.0% | |
| TGTGCTATGGCCTATGGGAT+TGG | - | chr5_3:11842826-11842845 | Msa0798860:intron | 50.0% | |
| GCTCCATCCTCATAGTAACC+AGG | + | chr5_3:11842974-11842993 | None:intergenic | 50.0% | |
| TCACACAGCTACAGGTTCTG+TGG | + | chr5_3:11843373-11843392 | None:intergenic | 50.0% | |
| AACACAGCTCACACAGCTAC+AGG | + | chr5_3:11843381-11843400 | None:intergenic | 50.0% | |
| ! | TACGTGTCGACGTTGGACAC+CGG | + | chr5_3:11837455-11837474 | None:intergenic | 55.0% |
| !! | GAAGCACTGCTTTGGACCGA+TGG | - | chr5_3:11838162-11838181 | Msa0798860:intron | 55.0% |
| CAGCAATTGGGGTTGACCCT+TGG | - | chr5_3:11838776-11838795 | Msa0798860:intron | 55.0% | |
| ! | GCCGGTACTTTTACAGCCCT+AGG | + | chr5_3:11839433-11839452 | None:intergenic | 55.0% |
| AGCTGCATTTGGGCCTACTG+AGG | + | chr5_3:11841830-11841849 | None:intergenic | 55.0% | |
| CATGGAACCGGTCACGGTAT+TGG | - | chr5_3:11842577-11842596 | Msa0798860:intron | 55.0% | |
| GTAGGACCCAATACCGTGAC+CGG | + | chr5_3:11842587-11842606 | None:intergenic | 55.0% | |
| GCTCAGGTTAGGACTTACCC+AGG | + | chr5_3:11843092-11843111 | None:intergenic | 55.0% | |
| ! | CTTGCACAGGAGCATGCTCG+AGG | - | chr5_3:11838997-11839016 | Msa0798860:intron | 60.0% |
| AGCCCATGTTCGGGATGGTG+CGG | - | chr5_3:11840381-11840400 | Msa0798860:CDS | 60.0% | |
| AGCCGCACCATCCCGAACAT+GGG | + | chr5_3:11840386-11840405 | None:intergenic | 60.0% | |
| CAGCCGCACCATCCCGAACA+TGG | + | chr5_3:11840387-11840406 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 11836457 | 11843713 | 11836457 | ID=Msa0798860;Name=Msa0798860 |
| chr5_3 | mRNA | 11836457 | 11843713 | 11836457 | ID=Msa0798860-mRNA-1;Parent=Msa0798860;Name=Msa0798860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=121|0.86|0.87|1|1|1|16|321|682 |
| chr5_3 | exon | 11836457 | 11836939 | 11836457 | ID=Msa0798860-mRNA-1:exon:4869;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11837077 | 11837201 | 11837077 | ID=Msa0798860-mRNA-1:exon:4868;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11837370 | 11837435 | 11837370 | ID=Msa0798860-mRNA-1:exon:4867;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11837548 | 11837652 | 11837548 | ID=Msa0798860-mRNA-1:exon:4866;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11837764 | 11837860 | 11837764 | ID=Msa0798860-mRNA-1:exon:4865;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11838047 | 11838127 | 11838047 | ID=Msa0798860-mRNA-1:exon:4864;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11838240 | 11838374 | 11838240 | ID=Msa0798860-mRNA-1:exon:4863;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11838849 | 11838954 | 11838849 | ID=Msa0798860-mRNA-1:exon:4862;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11839516 | 11839583 | 11839516 | ID=Msa0798860-mRNA-1:exon:4861;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11839732 | 11839818 | 11839732 | ID=Msa0798860-mRNA-1:exon:4860;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11840127 | 11840438 | 11840127 | ID=Msa0798860-mRNA-1:exon:4859;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11840856 | 11840978 | 11840856 | ID=Msa0798860-mRNA-1:exon:4858;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11841126 | 11841410 | 11841126 | ID=Msa0798860-mRNA-1:exon:4857;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11841892 | 11842031 | 11841892 | ID=Msa0798860-mRNA-1:exon:4856;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11843310 | 11843373 | 11843310 | ID=Msa0798860-mRNA-1:exon:4855;Parent=Msa0798860-mRNA-1 |
| chr5_3 | exon | 11843500 | 11843713 | 11843500 | ID=Msa0798860-mRNA-1:exon:4854;Parent=Msa0798860-mRNA-1 |
| chr5_3 | five_prime_UTR | 11843593 | 11843713 | 11843593 | ID=Msa0798860-mRNA-1:five_prime_utr;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11843500 | 11843592 | 11843500 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11843310 | 11843373 | 11843310 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11841892 | 11842031 | 11841892 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11841126 | 11841410 | 11841126 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11840856 | 11840978 | 11840856 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11840127 | 11840438 | 11840127 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11839732 | 11839818 | 11839732 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11839516 | 11839583 | 11839516 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11838849 | 11838954 | 11838849 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11838240 | 11838374 | 11838240 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11838047 | 11838127 | 11838047 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11837764 | 11837860 | 11837764 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11837548 | 11837652 | 11837548 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11837370 | 11837435 | 11837370 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11837077 | 11837201 | 11837077 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | CDS | 11836778 | 11836939 | 11836778 | ID=Msa0798860-mRNA-1:cds;Parent=Msa0798860-mRNA-1 |
| chr5_3 | three_prime_UTR | 11836457 | 11836777 | 11836457 | ID=Msa0798860-mRNA-1:three_prime_utr;Parent=Msa0798860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
