Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323630 | sp|P27061|PPA1_SOLLC | 62.598 | 254 | 95 | 0 | 6 | 259 | 1 | 254 | 8.31e-121 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323630 | G7L8K1 | 95.436 | 241 | 10 | 1 | 21 | 260 | 19 | 259 | 3.70e-160 | 454 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0972120 | Msa1323630 | -0.809202 | 2.125702e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323630 | MtrunA17_Chr8g0356021 | 95.436 | 241 | 10 | 1 | 21 | 260 | 19 | 259 | 7.12e-164 | 454 |
| Msa1323630 | MtrunA17_Chr6g0487381 | 54.930 | 213 | 96 | 0 | 48 | 260 | 40 | 252 | 5.58e-83 | 249 |
| Msa1323630 | MtrunA17_Chr8g0340821 | 50.463 | 216 | 105 | 2 | 46 | 260 | 47 | 261 | 2.51e-74 | 227 |
| Msa1323630 | MtrunA17_Chr8g0340811 | 50.455 | 220 | 105 | 3 | 42 | 260 | 48 | 264 | 3.99e-74 | 226 |
| Msa1323630 | MtrunA17_Chr8g0340031 | 47.887 | 213 | 110 | 1 | 48 | 259 | 37 | 249 | 8.99e-69 | 213 |
| Msa1323630 | MtrunA17_Chr8g0334461 | 46.330 | 218 | 110 | 3 | 50 | 260 | 70 | 287 | 1.25e-62 | 198 |
| Msa1323630 | MtrunA17_Chr1g0168451 | 40.000 | 230 | 135 | 2 | 34 | 260 | 37 | 266 | 6.02e-58 | 185 |
| Msa1323630 | MtrunA17_Chr1g0186301 | 39.819 | 221 | 128 | 4 | 43 | 260 | 44 | 262 | 5.60e-56 | 180 |
| Msa1323630 | MtrunA17_Chr8g0340021 | 50.758 | 132 | 64 | 1 | 129 | 259 | 21 | 152 | 7.84e-39 | 132 |
| Msa1323630 | MtrunA17_Chr8g0356651 | 47.778 | 90 | 46 | 1 | 46 | 135 | 48 | 136 | 1.88e-24 | 95.9 |
| Msa1323630 | MtrunA17_Chr7g0265641 | 42.857 | 105 | 59 | 1 | 133 | 236 | 5 | 109 | 4.39e-23 | 91.3 |
| Msa1323630 | MtrunA17_Chr3g0113091 | 28.155 | 206 | 143 | 3 | 48 | 253 | 89 | 289 | 1.19e-21 | 91.7 |
| Msa1323630 | MtrunA17_Chr5g0436371 | 27.230 | 213 | 140 | 5 | 48 | 256 | 86 | 287 | 2.06e-18 | 82.8 |
| Msa1323630 | MtrunA17_Chr8g0356661 | 60.784 | 51 | 20 | 0 | 208 | 258 | 5 | 55 | 8.12e-18 | 75.1 |
| Msa1323630 | MtrunA17_Chr8g0334471 | 45.588 | 68 | 36 | 1 | 136 | 202 | 10 | 77 | 7.56e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323630 | AT4G25150.1 | 62.846 | 253 | 92 | 1 | 9 | 259 | 7 | 259 | 9.76e-118 | 337 |
| Msa1323630 | AT5G51260.1 | 60.456 | 263 | 84 | 2 | 6 | 259 | 5 | 256 | 9.73e-114 | 327 |
| Msa1323630 | AT4G29270.1 | 47.876 | 259 | 122 | 2 | 5 | 260 | 8 | 256 | 1.91e-85 | 255 |
| Msa1323630 | AT4G29260.1 | 55.189 | 212 | 95 | 0 | 48 | 259 | 43 | 254 | 3.75e-83 | 249 |
| Msa1323630 | AT5G51260.2 | 57.282 | 206 | 68 | 2 | 6 | 202 | 5 | 199 | 3.84e-81 | 243 |
| Msa1323630 | AT2G38600.2 | 42.254 | 213 | 122 | 1 | 48 | 259 | 38 | 250 | 4.63e-62 | 196 |
| Msa1323630 | AT2G38600.1 | 42.254 | 213 | 122 | 1 | 48 | 259 | 38 | 250 | 4.63e-62 | 196 |
| Msa1323630 | AT1G04040.1 | 43.119 | 218 | 118 | 3 | 48 | 260 | 55 | 271 | 3.33e-58 | 186 |
| Msa1323630 | AT5G44020.1 | 42.857 | 217 | 120 | 3 | 48 | 260 | 56 | 272 | 1.41e-56 | 182 |
| Msa1323630 | AT5G24780.1 | 41.860 | 215 | 121 | 4 | 47 | 259 | 56 | 268 | 7.15e-54 | 175 |
| Msa1323630 | AT5G24770.1 | 40.930 | 215 | 123 | 4 | 47 | 259 | 51 | 263 | 8.82e-53 | 172 |
| Msa1323630 | AT5G24780.2 | 40.252 | 159 | 93 | 2 | 47 | 203 | 56 | 214 | 8.86e-36 | 127 |
| Msa1323630 | AT5G24770.2 | 39.873 | 158 | 93 | 2 | 47 | 202 | 51 | 208 | 3.63e-35 | 125 |
| Msa1323630 | AT2G39920.4 | 25.822 | 213 | 129 | 5 | 48 | 257 | 88 | 274 | 2.91e-12 | 65.5 |
| Msa1323630 | AT2G39920.3 | 25.822 | 213 | 129 | 5 | 48 | 257 | 88 | 274 | 2.91e-12 | 65.5 |
| Msa1323630 | AT2G39920.1 | 25.822 | 213 | 129 | 5 | 48 | 257 | 88 | 274 | 2.91e-12 | 65.5 |
| Msa1323630 | AT2G39920.2 | 25.352 | 213 | 129 | 5 | 48 | 257 | 88 | 273 | 3.28e-12 | 65.5 |
Find 84 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATAAATGCCGGGTTTC+GGG | 0.194074 | 8_4:-32126695 | Msa1323630:CDS |
| TTCAGGATTCTTGGAAATTC+TGG | 0.216636 | 8_4:-32124459 | Msa1323630:CDS |
| TATTATGCTGCTCATGGTTA+TGG | 0.222304 | 8_4:-32128073 | Msa1323630:CDS |
| AAGCTTTAAACTGGGTTCTA+TGG | 0.268761 | 8_4:+32126801 | None:intergenic |
| GATCAATGGAGTGATTTATT+AGG | 0.272575 | 8_4:-32124435 | Msa1323630:CDS |
| TTCAGCGTATTCGAGAATTA+AGG | 0.281085 | 8_4:+32128351 | None:intergenic |
| AAAGAGGGATTCAGGATTCT+TGG | 0.286115 | 8_4:-32124468 | Msa1323630:CDS |
| TATAAGGTCATTCTACTTAC+AGG | 0.289349 | 8_4:-32126754 | Msa1323630:CDS |
| AACTTTGAGCTGTACATAAA+TGG | 0.291655 | 8_4:-32124319 | Msa1323630:three_prime_UTR |
| CGAGGAAAACCGTGGTGGTT+GGG | 0.311711 | 8_4:+32128376 | None:intergenic |
| ATTTGATAAATGCCGGGTTT+CGG | 0.331671 | 8_4:-32126696 | Msa1323630:CDS |
| GAGAAGCGAGATGGAGAAAG+AGG | 0.331688 | 8_4:-32124484 | Msa1323630:CDS |
| AAAAGGTTATGTATATGATT+TGG | 0.335932 | 8_4:-32128206 | Msa1323630:CDS |
| TTATGAAGATGTCTTGAATC+TGG | 0.337669 | 8_4:-32126779 | Msa1323630:CDS |
| ATCTTCATAAAGCTTTAAAC+TGG | 0.337734 | 8_4:+32126792 | None:intergenic |
| GCAATGTAATACATGGGATT+TGG | 0.337743 | 8_4:+32124381 | None:intergenic |
| AGATGGAGAAAGAGGGATTC+AGG | 0.341663 | 8_4:-32124476 | Msa1323630:CDS |
| GGAAGTTACTAATTCATATA+TGG | 0.353792 | 8_4:-32124298 | Msa1323630:three_prime_UTR |
| ATTATGCTGCTCATGGTTAT+GGG | 0.360273 | 8_4:-32128072 | Msa1323630:intron |
| TAACCATGAGCAGCATAATA+AGG | 0.365506 | 8_4:+32128076 | None:intergenic |
| GTTTGATGAGTGGGTGGAGC+AGG | 0.372173 | 8_4:-32126836 | Msa1323630:CDS |
| TGTCTTGAATCTGGGGTATA+AGG | 0.379132 | 8_4:-32126770 | Msa1323630:CDS |
| ATGCGAAGAAAGAAAATAGA+AGG | 0.390981 | 8_4:+32128419 | None:intergenic |
| ATTGGCACCAGCTCATATTA+AGG | 0.391845 | 8_4:-32126672 | Msa1323630:intron |
| GAGGAAAACCGTGGTGGTTG+GGG | 0.392755 | 8_4:+32128377 | None:intergenic |
| AAGAAGATGGATTAGATGCT+TGG | 0.400183 | 8_4:-32128135 | Msa1323630:CDS |
| ACATGTTCCACACATTCTTT+CGG | 0.403613 | 8_4:+32128247 | None:intergenic |
| TTCAGATCCTCAGACGATAA+AGG | 0.420846 | 8_4:-32124537 | Msa1323630:intron |
| GTTGATAATTTGATAAATGC+CGG | 0.433354 | 8_4:-32126703 | Msa1323630:CDS |
| TTTCGTTACGTTGCAGAAGT+TGG | 0.436255 | 8_4:-32128315 | Msa1323630:CDS |
| TAAATGCCGGGTTTCGGGAT+TGG | 0.438693 | 8_4:-32126690 | Msa1323630:CDS |
| TTGGAAATTCTGGTGATCAA+TGG | 0.442841 | 8_4:-32124449 | Msa1323630:CDS |
| AGAAGATGGATTAGATGCTT+GGG | 0.451825 | 8_4:-32128134 | Msa1323630:CDS |
| TATGAAGATGTCTTGAATCT+GGG | 0.452408 | 8_4:-32126778 | Msa1323630:CDS |
| CATGGGATTTGGAAGCTTGA+AGG | 0.453813 | 8_4:+32124392 | None:intergenic |
| TTTGATGAGTGGGTGGAGCA+GGG | 0.459515 | 8_4:-32126835 | Msa1323630:CDS |
| AAGGAGTATATGAATGGAAA+AGG | 0.464966 | 8_4:-32128223 | Msa1323630:CDS |
| AAAACTTGTATGCTATCCAT+TGG | 0.467989 | 8_4:-32124236 | Msa1323630:three_prime_UTR |
| ACGAGGAAAACCGTGGTGGT+TGG | 0.473801 | 8_4:+32128375 | None:intergenic |
| TGATGAGTGGGTGGAGCAGG+GGG | 0.485739 | 8_4:-32126833 | Msa1323630:CDS |
| TTTAAACTGGGTTCTATGGC+TGG | 0.488038 | 8_4:+32126805 | None:intergenic |
| AGTGTGAAGCTTAAAGAAGA+TGG | 0.491255 | 8_4:-32128148 | Msa1323630:CDS |
| TAAATGTGGTTGCAGGTTCG+AGG | 0.491652 | 8_4:-32126875 | Msa1323630:intron |
| TCAGCGTATTCGAGAATTAA+GGG | 0.491797 | 8_4:+32128352 | None:intergenic |
| CATGTGAAGGAGTATATGAA+TGG | 0.494308 | 8_4:-32128229 | Msa1323630:CDS |
| TTGCCTTATTATGCTGCTCA+TGG | 0.496565 | 8_4:-32128079 | Msa1323630:CDS |
| TTGAACAGTAACTTCGATGA+AGG | 0.510415 | 8_4:+32128527 | None:intergenic |
| TTGCTAAGCAATGTAATACA+TGG | 0.514183 | 8_4:+32124374 | None:intergenic |
| TAATGAATGTGGAAAATGAA+TGG | 0.515598 | 8_4:+32128470 | None:intergenic |
| TGCAGAAGTTGGAGATTCGC+GGG | 0.518192 | 8_4:-32128304 | Msa1323630:CDS |
| AAACTTGTATGCTATCCATT+GGG | 0.521401 | 8_4:-32124235 | Msa1323630:three_prime_UTR |
| TTGATAATTTGATAAATGCC+GGG | 0.523675 | 8_4:-32126702 | Msa1323630:CDS |
| AGAAGCGAGATGGAGAAAGA+GGG | 0.524776 | 8_4:-32124483 | Msa1323630:CDS |
| GGAATTACCTTAATATGAGC+TGG | 0.532412 | 8_4:+32126665 | None:intergenic |
| TTGATGAGTGGGTGGAGCAG+GGG | 0.534420 | 8_4:-32126834 | Msa1323630:CDS |
| TTGCAGAAGTTGGAGATTCG+CGG | 0.538642 | 8_4:-32128305 | Msa1323630:CDS |
| GAAATAGCGAATAAAGAAGC+TGG | 0.538921 | 8_4:-32128184 | Msa1323630:CDS |
| CTGGTGCCAATCCCGAAACC+CGG | 0.541312 | 8_4:+32126684 | None:intergenic |
| AAGCGAATAACTTGAGTCCA+TGG | 0.543282 | 8_4:-32128279 | Msa1323630:CDS |
| TCATTCTACTTACAGGGCGG+AGG | 0.546592 | 8_4:-32126747 | Msa1323630:CDS |
| AATCGTCATTGTAATGAATG+TGG | 0.557289 | 8_4:+32128459 | None:intergenic |
| AGGGCGGAGGGAAAGTCATA+GGG | 0.572833 | 8_4:-32126734 | Msa1323630:CDS |
| CCATGCGAAGTTTGATGAGT+GGG | 0.573382 | 8_4:-32126845 | Msa1323630:CDS |
| ATCAGAGAAGAGAAGCGAGA+TGG | 0.574550 | 8_4:-32124493 | Msa1323630:CDS |
| TCTTCATAAAGCTTTAAACT+GGG | 0.594341 | 8_4:+32126793 | None:intergenic |
| CCCACTCATCAAACTTCGCA+TGG | 0.595547 | 8_4:+32126845 | None:intergenic |
| ATGAAGATGTCTTGAATCTG+GGG | 0.597905 | 8_4:-32126777 | Msa1323630:CDS |
| AGTAACTTCGATGAAGGAGA+GGG | 0.599380 | 8_4:+32128533 | None:intergenic |
| AGGAAAACCGTGGTGGTTGG+GGG | 0.609210 | 8_4:+32128378 | None:intergenic |
| CATTCTACTTACAGGGCGGA+GGG | 0.613431 | 8_4:-32126746 | Msa1323630:CDS |
| CAGTAACTTCGATGAAGGAG+AGG | 0.618815 | 8_4:+32128532 | None:intergenic |
| TGCTAAGCAATGTAATACAT+GGG | 0.621190 | 8_4:+32124375 | None:intergenic |
| AACTGTGCCGAAAGAATGTG+TGG | 0.623737 | 8_4:-32128254 | Msa1323630:CDS |
| ACCATGCGAAGTTTGATGAG+TGG | 0.624466 | 8_4:-32126846 | Msa1323630:CDS |
| ACATGACTGAATTATCCCAA+TGG | 0.628140 | 8_4:+32124220 | None:intergenic |
| ATAAGGTCATTCTACTTACA+GGG | 0.634277 | 8_4:-32126753 | Msa1323630:CDS |
| TATTCGAGAATTAAGGGACG+AGG | 0.651715 | 8_4:+32128358 | None:intergenic |
| AGAATGTGTGGAACATGTGA+AGG | 0.663179 | 8_4:-32128242 | Msa1323630:CDS |
| TGCGAAGTTTGATGAGTGGG+TGG | 0.665929 | 8_4:-32126842 | Msa1323630:CDS |
| TAACTTCGATGAAGGAGAGG+GGG | 0.682361 | 8_4:+32128535 | None:intergenic |
| GTAACTTCGATGAAGGAGAG+GGG | 0.705209 | 8_4:+32128534 | None:intergenic |
| TTAAGGGACGAGGAAAACCG+TGG | 0.748139 | 8_4:+32128368 | None:intergenic |
| AGGTCATTCTACTTACAGGG+CGG | 0.758818 | 8_4:-32126750 | Msa1323630:CDS |
| AGGGACGAGGAAAACCGTGG+TGG | 0.770062 | 8_4:+32128371 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAATGAAAATATTAAAA+TGG | + | chr8_4:32124713-32124732 | None:intergenic | 10.0% |
| !!! | ATTAGAATTTTTTTTTTTGA+GGG | + | chr8_4:32124915-32124934 | None:intergenic | 10.0% |
| !!! | AATTAGAATTTTTTTTTTTG+AGG | + | chr8_4:32124916-32124935 | None:intergenic | 10.0% |
| !!! | CCTAATATTTTTATTTTATA+CGG | + | chr8_4:32127224-32127243 | None:intergenic | 10.0% |
| !! | AAAAAAAATTAACATAAATG+TGG | - | chr8_4:32127261-32127280 | Msa1323630:intron | 10.0% |
| !! | AAAATTTATTTCATATATCA+CGG | - | chr8_4:32127933-32127952 | Msa1323630:intron | 10.0% |
| !! | TATATTGTGTTTGATAAATT+AGG | - | chr8_4:32124753-32124772 | Msa1323630:intron | 15.0% |
| !! | AAACAAAAAAACAAGATTAA+GGG | - | chr8_4:32125138-32125157 | Msa1323630:intron | 15.0% |
| !! | TCTTATGTTTAGAAAAATAT+TGG | - | chr8_4:32125232-32125251 | Msa1323630:intron | 15.0% |
| !!! | TGTATCAAATTTTTTAAATG+TGG | - | chr8_4:32125866-32125885 | Msa1323630:intron | 15.0% |
| !!! | TAAAATAGATAATAATGGAA+GGG | + | chr8_4:32126283-32126302 | None:intergenic | 15.0% |
| !!! | TTAAAATAGATAATAATGGA+AGG | + | chr8_4:32126284-32126303 | None:intergenic | 15.0% |
| !! | ACTGTTAAAATAGATAATAA+TGG | + | chr8_4:32126288-32126307 | None:intergenic | 15.0% |
| !!! | ATTATTATCTATTTTAACAG+TGG | - | chr8_4:32126287-32126306 | Msa1323630:intron | 15.0% |
| !!! | TTTTGATCTCATTTTATTAA+TGG | + | chr8_4:32126931-32126950 | None:intergenic | 15.0% |
| !! | TTAATAAAATGAGATCAAAA+CGG | - | chr8_4:32126931-32126950 | Msa1323630:intron | 15.0% |
| !! | CCGTATAAAATAAAAATATT+AGG | - | chr8_4:32127221-32127240 | Msa1323630:intron | 15.0% |
| !! | TGCTATAATATAATGAAAAA+TGG | - | chr8_4:32127439-32127458 | Msa1323630:intron | 15.0% |
| !! | TAATATAATGAAAAATGGAA+AGG | - | chr8_4:32127444-32127463 | Msa1323630:intron | 15.0% |
| !! | TTATGGATTTAATTAAAATC+AGG | + | chr8_4:32127540-32127559 | None:intergenic | 15.0% |
| !! | AAACTAATAACATGAAAAAA+TGG | + | chr8_4:32127888-32127907 | None:intergenic | 15.0% |
| !! | TAAATAAAGCATAAATATTG+AGG | + | chr8_4:32128023-32128042 | None:intergenic | 15.0% |
| !! | AAAAGGTTATGTATATGATT+TGG | - | chr8_4:32124549-32124568 | Msa1323630:intron | 20.0% |
| !! | ATTTCCACATGTAAAATTAT+AGG | + | chr8_4:32124820-32124839 | None:intergenic | 20.0% |
| !! | AAAATTCTAATTATAGGGAT+TGG | - | chr8_4:32124924-32124943 | Msa1323630:intron | 20.0% |
| !! | AATCTGTTAGAAACAATTTA+TGG | - | chr8_4:32124989-32125008 | Msa1323630:intron | 20.0% |
| !!! | ACAATTTATGGATTAATCTT+TGG | - | chr8_4:32125001-32125020 | Msa1323630:intron | 20.0% |
| !!! | CAATTTATGGATTAATCTTT+GGG | - | chr8_4:32125002-32125021 | Msa1323630:intron | 20.0% |
| !!! | AATTTATGGATTAATCTTTG+GGG | - | chr8_4:32125003-32125022 | Msa1323630:intron | 20.0% |
| !! | GAAACAAAAAAACAAGATTA+AGG | - | chr8_4:32125137-32125156 | Msa1323630:intron | 20.0% |
| !! | ATATTTCACTAATAAGTGTT+TGG | - | chr8_4:32125172-32125191 | Msa1323630:intron | 20.0% |
| !! | AAAAATATTGGCAAGTTTAA+TGG | - | chr8_4:32125244-32125263 | Msa1323630:intron | 20.0% |
| !! | AAAATATTGGCAAGTTTAAT+GGG | - | chr8_4:32125245-32125264 | Msa1323630:intron | 20.0% |
| !! | ATTTCAAGAATCAAAACATA+AGG | - | chr8_4:32125338-32125357 | Msa1323630:intron | 20.0% |
| !!! | AAAAGTAATGCAATTTTGAA+TGG | - | chr8_4:32125387-32125406 | Msa1323630:intron | 20.0% |
| !! | ACAATAAGCATATAGTATTT+GGG | + | chr8_4:32125543-32125562 | None:intergenic | 20.0% |
| !!! | ATACAAATAGTTGAAGTATT+TGG | - | chr8_4:32125753-32125772 | Msa1323630:intron | 20.0% |
| !! | AAAATAACATTAAGCATACT+AGG | + | chr8_4:32126429-32126448 | None:intergenic | 20.0% |
| !!! | AGTATGCTTAATGTTATTTT+TGG | - | chr8_4:32126429-32126448 | Msa1323630:intron | 20.0% |
| !! | CTTTAATTACAATAGAAACT+GGG | + | chr8_4:32127085-32127104 | None:intergenic | 20.0% |
| !! | ACTTTAATTACAATAGAAAC+TGG | + | chr8_4:32127086-32127105 | None:intergenic | 20.0% |
| !!! | TTTTTTACAATAGATGAATC+AGG | + | chr8_4:32127247-32127266 | None:intergenic | 20.0% |
| !!! | ATCATGATTTTCTGATTTTA+AGG | + | chr8_4:32127611-32127630 | None:intergenic | 20.0% |
| !!! | ATTACTAATGCTTTTTAGTA+CGG | - | chr8_4:32127789-32127808 | Msa1323630:intron | 20.0% |
| !!! | GCTTTATTTACAATGTAAAA+AGG | - | chr8_4:32128033-32128052 | Msa1323630:intron | 20.0% |
| ! | TAATGAATGTGGAAAATGAA+TGG | + | chr8_4:32124288-32124307 | None:intergenic | 25.0% |
| ! | ATTGTGTTTGATAAATTAGG+AGG | - | chr8_4:32124756-32124775 | Msa1323630:intron | 25.0% |
| !! | ATTTATGGATTAATCTTTGG+GGG | - | chr8_4:32125004-32125023 | Msa1323630:intron | 25.0% |
| !!! | TACTTTTTTAATGTTGCGTA+TGG | + | chr8_4:32125374-32125393 | None:intergenic | 25.0% |
| !! | GCACAATTGTTTATGATTTT+AGG | - | chr8_4:32125466-32125485 | Msa1323630:intron | 25.0% |
| !!! | TTTATGATTTTAGGTGTTTG+AGG | - | chr8_4:32125475-32125494 | Msa1323630:intron | 25.0% |
| ! | GACAATAAGCATATAGTATT+TGG | + | chr8_4:32125544-32125563 | None:intergenic | 25.0% |
| !! | AAGTATTTGGCCATATTTTT+GGG | - | chr8_4:32125766-32125785 | Msa1323630:intron | 25.0% |
| ! | GTATATATTTCCTCAACAAA+TGG | - | chr8_4:32125806-32125825 | Msa1323630:intron | 25.0% |
| ! | ATTTGATACAGAGAAATAAC+TGG | + | chr8_4:32125856-32125875 | None:intergenic | 25.0% |
| !!! | AATTTTTTAAATGTGGTTGC+AGG | - | chr8_4:32125873-32125892 | Msa1323630:intron | 25.0% |
| !!! | TCTTCATAAAGCTTTAAACT+GGG | + | chr8_4:32125965-32125984 | None:intergenic | 25.0% |
| !!! | ATCTTCATAAAGCTTTAAAC+TGG | + | chr8_4:32125966-32125985 | None:intergenic | 25.0% |
| !!! | GTTGATAATTTGATAAATGC+CGG | - | chr8_4:32126052-32126071 | Msa1323630:intron | 25.0% |
| !! | TTGATAATTTGATAAATGCC+GGG | - | chr8_4:32126053-32126072 | Msa1323630:intron | 25.0% |
| ! | AAATATTACCATTTCCCTTA+TGG | - | chr8_4:32126355-32126374 | Msa1323630:intron | 25.0% |
| ! | TATAGATATAGAAGCAATGT+TGG | - | chr8_4:32126470-32126489 | Msa1323630:intron | 25.0% |
| !! | GTGTATTTAGTCTTTACTTA+TGG | - | chr8_4:32126755-32126774 | Msa1323630:CDS | 25.0% |
| !! | TATTTAGTCTTTACTTATGG+AGG | - | chr8_4:32126758-32126777 | Msa1323630:CDS | 25.0% |
| ! | TTTGATATTGTAGAAGTAGA+GGG | + | chr8_4:32126810-32126829 | None:intergenic | 25.0% |
| ! | CTACAATATCAAACTACAAT+AGG | - | chr8_4:32126817-32126836 | Msa1323630:CDS | 25.0% |
| ! | CAAACTACAATAGGATAATT+TGG | - | chr8_4:32126826-32126845 | Msa1323630:CDS | 25.0% |
| ! | GTCTTAATAATGTGAAATGT+CGG | - | chr8_4:32127158-32127177 | Msa1323630:intron | 25.0% |
| ! | AAAATTAACATAAATGTGGC+TGG | - | chr8_4:32127265-32127284 | Msa1323630:intron | 25.0% |
| ! | TCAATGATTAGGAAAGATTA+TGG | + | chr8_4:32127557-32127576 | None:intergenic | 25.0% |
| !! | ATCTTTCCTAATCATTGATT+TGG | - | chr8_4:32127559-32127578 | Msa1323630:intron | 25.0% |
| ! | GTTAATCCAAATCAATGATT+AGG | + | chr8_4:32127568-32127587 | None:intergenic | 25.0% |
| ! | ATACTTCAAATGTATGTTTG+AGG | + | chr8_4:32127661-32127680 | None:intergenic | 25.0% |
| !!! | CTAAAAAGCATTAGTAATAG+TGG | + | chr8_4:32127787-32127806 | None:intergenic | 25.0% |
| ! | CAAAAACAATTAATTTCGCA+TGG | + | chr8_4:32127822-32127841 | None:intergenic | 25.0% |
| !!! | AAGAGTACTAATATAATCAG+TGG | + | chr8_4:32127987-32128006 | None:intergenic | 25.0% |
| ! | TATAAGATCACAGTATAAGA+AGG | + | chr8_4:32128059-32128078 | None:intergenic | 25.0% |
| ! | GGAAGTTACTAATTCATATA+TGG | - | chr8_4:32128457-32128476 | Msa1323630:exon | 25.0% |
| !! | TGACAATTACAAGTTTTCAA+TGG | + | chr8_4:32128489-32128508 | None:intergenic | 25.0% |
| !! | ATAGCATACAAGTTTTCTTT+TGG | + | chr8_4:32128515-32128534 | None:intergenic | 25.0% |
| AATCGTCATTGTAATGAATG+TGG | + | chr8_4:32124299-32124318 | None:intergenic | 30.0% | |
| ATGCGAAGAAAGAAAATAGA+AGG | + | chr8_4:32124339-32124358 | None:intergenic | 30.0% | |
| ! | AAGGAGTATATGAATGGAAA+AGG | - | chr8_4:32124532-32124551 | Msa1323630:CDS | 30.0% |
| ! | GTGACCTATAATTTTACATG+TGG | - | chr8_4:32124813-32124832 | Msa1323630:intron | 30.0% |
| TGGAAATTATAATGTAGCTG+TGG | - | chr8_4:32124833-32124852 | Msa1323630:intron | 30.0% | |
| AAATTATAATGTAGCTGTGG+CGG | - | chr8_4:32124836-32124855 | Msa1323630:intron | 30.0% | |
| !!! | AGCAGTTTTTGGTATTTTTC+AGG | - | chr8_4:32125507-32125526 | Msa1323630:intron | 30.0% |
| ! | TATTACTATCTTTTGTGCCT+GGG | + | chr8_4:32125567-32125586 | None:intergenic | 30.0% |
| ! | TTATTACTATCTTTTGTGCC+TGG | + | chr8_4:32125568-32125587 | None:intergenic | 30.0% |
| ACTTTATCCAAACACAACTA+AGG | + | chr8_4:32125608-32125627 | None:intergenic | 30.0% | |
| TAGTTGTGTTTGGATAAAGT+AGG | - | chr8_4:32125608-32125627 | Msa1323630:intron | 30.0% | |
| !! | GAAGTATTTGGCCATATTTT+TGG | - | chr8_4:32125765-32125784 | Msa1323630:intron | 30.0% |
| ! | CTAAAAACATCCATTTGTTG+AGG | + | chr8_4:32125819-32125838 | None:intergenic | 30.0% |
| TTATGAAGATGTCTTGAATC+TGG | - | chr8_4:32125976-32125995 | Msa1323630:intron | 30.0% | |
| TATGAAGATGTCTTGAATCT+GGG | - | chr8_4:32125977-32125996 | Msa1323630:intron | 30.0% | |
| TATAAGGTCATTCTACTTAC+AGG | - | chr8_4:32126001-32126020 | Msa1323630:intron | 30.0% | |
| ATAAGGTCATTCTACTTACA+GGG | - | chr8_4:32126002-32126021 | Msa1323630:intron | 30.0% | |
| ! | ATAGACTTAACAAGCTTTGT+AGG | + | chr8_4:32126114-32126133 | None:intergenic | 30.0% |
| !!! | TATTTTAACAGTGGAAGAGT+TGG | - | chr8_4:32126296-32126315 | Msa1323630:intron | 30.0% |
| !! | AATATTTGTGTCACTGATTC+AGG | + | chr8_4:32126342-32126361 | None:intergenic | 30.0% |
| AGTTGAAAAATCCACCATAA+GGG | + | chr8_4:32126372-32126391 | None:intergenic | 30.0% | |
| TAGTTGAAAAATCCACCATA+AGG | + | chr8_4:32126373-32126392 | None:intergenic | 30.0% | |
| AATGATTTCTGTCAACTGTT+TGG | - | chr8_4:32126400-32126419 | Msa1323630:intron | 30.0% | |
| TTACCTTTCTCCAATGTTAT+GGG | + | chr8_4:32126500-32126519 | None:intergenic | 30.0% | |
| TTTACCTTTCTCCAATGTTA+TGG | + | chr8_4:32126501-32126520 | None:intergenic | 30.0% | |
| GATGAGGATGATATGAAAAT+GGG | + | chr8_4:32126651-32126670 | None:intergenic | 30.0% | |
| TGATGAGGATGATATGAAAA+TGG | + | chr8_4:32126652-32126671 | None:intergenic | 30.0% | |
| TCAAGCTAATTCATCCAAAA+GGG | + | chr8_4:32126714-32126733 | None:intergenic | 30.0% | |
| GTTTGATATTGTAGAAGTAG+AGG | + | chr8_4:32126811-32126830 | None:intergenic | 30.0% | |
| CTTCAGATCTTTCTTTATCA+TGG | + | chr8_4:32126875-32126894 | None:intergenic | 30.0% | |
| ! | AAAGATCTGAAGTTAAGACA+CGG | - | chr8_4:32126883-32126902 | Msa1323630:intron | 30.0% |
| TAACAACCTTAACAACATTG+TGG | - | chr8_4:32126982-32127001 | Msa1323630:intron | 30.0% | |
| CAATTTCCACAATGTTGTTA+AGG | + | chr8_4:32126991-32127010 | None:intergenic | 30.0% | |
| ! | TGTAAGAAAGGAGTATGAAA+TGG | + | chr8_4:32127056-32127075 | None:intergenic | 30.0% |
| TGTTAAACCAAACACATTTC+AGG | + | chr8_4:32127125-32127144 | None:intergenic | 30.0% | |
| ATTATTAAGACTGAAGACAG+TGG | + | chr8_4:32127149-32127168 | None:intergenic | 30.0% | |
| TCAAAAACTTTGCATGAAGA+TGG | + | chr8_4:32127380-32127399 | None:intergenic | 30.0% | |
| TCACAATGTATAGTAGGTTT+AGG | - | chr8_4:32127513-32127532 | Msa1323630:intron | 30.0% | |
| GGCATTAGATGTTAAAAAGT+GGG | + | chr8_4:32127590-32127609 | None:intergenic | 30.0% | |
| AGGCATTAGATGTTAAAAAG+TGG | + | chr8_4:32127591-32127610 | None:intergenic | 30.0% | |
| ! | AACTGTGTTTGGTAATCTAT+TGG | + | chr8_4:32127686-32127705 | None:intergenic | 30.0% |
| ! | ACAAGTTGACAACAAAAAAG+AGG | + | chr8_4:32127748-32127767 | None:intergenic | 30.0% |
| ! | TTTTATGATCATTGTACCGT+TGG | - | chr8_4:32128082-32128101 | Msa1323630:CDS | 30.0% |
| TTTATGATCATTGTACCGTT+GGG | - | chr8_4:32128083-32128102 | Msa1323630:CDS | 30.0% | |
| !!! | TTATTTTAAGTTCACAGACG+AGG | + | chr8_4:32128127-32128146 | None:intergenic | 30.0% |
| GATCAATGGAGTGATTTATT+AGG | - | chr8_4:32128320-32128339 | Msa1323630:CDS | 30.0% | |
| TGCTAAGCAATGTAATACAT+GGG | + | chr8_4:32128383-32128402 | None:intergenic | 30.0% | |
| TTGCTAAGCAATGTAATACA+TGG | + | chr8_4:32128384-32128403 | None:intergenic | 30.0% | |
| AACTTTGAGCTGTACATAAA+TGG | - | chr8_4:32128436-32128455 | Msa1323630:CDS | 30.0% | |
| AAAACTTGTATGCTATCCAT+TGG | - | chr8_4:32128519-32128538 | Msa1323630:five_prime_UTR | 30.0% | |
| AAACTTGTATGCTATCCATT+GGG | - | chr8_4:32128520-32128539 | Msa1323630:five_prime_UTR | 30.0% | |
| TTGAACAGTAACTTCGATGA+AGG | + | chr8_4:32124231-32124250 | None:intergenic | 35.0% | |
| TCAGCGTATTCGAGAATTAA+GGG | + | chr8_4:32124406-32124425 | None:intergenic | 35.0% | |
| TTCAGCGTATTCGAGAATTA+AGG | + | chr8_4:32124407-32124426 | None:intergenic | 35.0% | |
| ACATGTTCCACACATTCTTT+CGG | + | chr8_4:32124511-32124530 | None:intergenic | 35.0% | |
| ! | CATGTGAAGGAGTATATGAA+TGG | - | chr8_4:32124526-32124545 | Msa1323630:CDS | 35.0% |
| GAAATAGCGAATAAAGAAGC+TGG | - | chr8_4:32124571-32124590 | Msa1323630:intron | 35.0% | |
| AGTGTGAAGCTTAAAGAAGA+TGG | - | chr8_4:32124607-32124626 | Msa1323630:intron | 35.0% | |
| !! | AAGAAGATGGATTAGATGCT+TGG | - | chr8_4:32124620-32124639 | Msa1323630:intron | 35.0% |
| !! | AGAAGATGGATTAGATGCTT+GGG | - | chr8_4:32124621-32124640 | Msa1323630:intron | 35.0% |
| TAACCATGAGCAGCATAATA+AGG | + | chr8_4:32124682-32124701 | None:intergenic | 35.0% | |
| TATTATGCTGCTCATGGTTA+TGG | - | chr8_4:32124682-32124701 | Msa1323630:intron | 35.0% | |
| ATTATGCTGCTCATGGTTAT+GGG | - | chr8_4:32124683-32124702 | Msa1323630:intron | 35.0% | |
| TCACATTTAGCGGTTAGATA+TGG | - | chr8_4:32125077-32125096 | Msa1323630:intron | 35.0% | |
| AATAGGATTACCTCTGATGT+AGG | - | chr8_4:32125104-32125123 | Msa1323630:intron | 35.0% | |
| ATAGGATTACCTCTGATGTA+GGG | - | chr8_4:32125105-32125124 | Msa1323630:intron | 35.0% | |
| TCATATATTCCCTACATCAG+AGG | + | chr8_4:32125117-32125136 | None:intergenic | 35.0% | |
| ATTCCTTAAGCATGCTGTTA+AGG | - | chr8_4:32125195-32125214 | Msa1323630:intron | 35.0% | |
| TTCCTTAAGCATGCTGTTAA+GGG | - | chr8_4:32125196-32125215 | Msa1323630:intron | 35.0% | |
| TCAGCTCATAAACAGAACAT+TGG | - | chr8_4:32125432-32125451 | Msa1323630:intron | 35.0% | |
| CAGCTCATAAACAGAACATT+GGG | - | chr8_4:32125433-32125452 | Msa1323630:intron | 35.0% | |
| TCATAAACAGAACATTGGGT+AGG | - | chr8_4:32125437-32125456 | Msa1323630:intron | 35.0% | |
| !! | GGTTAGTTGTTAGCAGTTTT+TGG | - | chr8_4:32125496-32125515 | Msa1323630:intron | 35.0% |
| ! | ATTACTATCTTTTGTGCCTG+GGG | + | chr8_4:32125566-32125585 | None:intergenic | 35.0% |
| CAATAGTCCTTAGTTGTGTT+TGG | - | chr8_4:32125598-32125617 | Msa1323630:intron | 35.0% | |
| GTTTGGATAAAGTAGGAACT+TGG | - | chr8_4:32125615-32125634 | Msa1323630:intron | 35.0% | |
| GAACTTGGAACTTAAACTCA+TGG | - | chr8_4:32125630-32125649 | Msa1323630:intron | 35.0% | |
| TGATACAGAGAAATAACTGG+AGG | + | chr8_4:32125853-32125872 | None:intergenic | 35.0% | |
| !! | AAGCTTTAAACTGGGTTCTA+TGG | + | chr8_4:32125957-32125976 | None:intergenic | 35.0% |
| ATGAAGATGTCTTGAATCTG+GGG | - | chr8_4:32125978-32125997 | Msa1323630:intron | 35.0% | |
| ATTTGATAAATGCCGGGTTT+CGG | - | chr8_4:32126059-32126078 | Msa1323630:intron | 35.0% | |
| GGAATTACCTTAATATGAGC+TGG | + | chr8_4:32126093-32126112 | None:intergenic | 35.0% | |
| ! | TAGATAATAATGGAAGGGAC+TGG | + | chr8_4:32126278-32126297 | None:intergenic | 35.0% |
| TATTACCATTTCCCTTATGG+TGG | - | chr8_4:32126358-32126377 | Msa1323630:intron | 35.0% | |
| AAAATCCACCATAAGGGAAA+TGG | + | chr8_4:32126366-32126385 | None:intergenic | 35.0% | |
| !!! | ACTCTGTTTTAGCCCATTTT+AGG | - | chr8_4:32126520-32126539 | Msa1323630:intron | 35.0% |
| TACTTGTCACGTTAGACATA+TGG | - | chr8_4:32126603-32126622 | Msa1323630:intron | 35.0% | |
| !!! | GACATATGGTTTTAGTACAC+AGG | - | chr8_4:32126617-32126636 | Msa1323630:intron | 35.0% |
| ATGTAAAACTATTTCCCCCA+TGG | + | chr8_4:32126687-32126706 | None:intergenic | 35.0% | |
| ! | AGTTTTACATCAGTCCCTTT+TGG | - | chr8_4:32126697-32126716 | Msa1323630:CDS | 35.0% |
| CTCAAGCTAATTCATCCAAA+AGG | + | chr8_4:32126715-32126734 | None:intergenic | 35.0% | |
| ATATTGTAGAAGTAGAGGGT+GGG | + | chr8_4:32126806-32126825 | None:intergenic | 35.0% | |
| CTACAATAGGATAATTTGGC+TGG | - | chr8_4:32126830-32126849 | Msa1323630:CDS | 35.0% | |
| ATATGATAGCAGACAGCATT+AGG | + | chr8_4:32127326-32127345 | None:intergenic | 35.0% | |
| ! | TCATGCAAAGTTTTTGAACG+AGG | - | chr8_4:32127383-32127402 | Msa1323630:intron | 35.0% |
| TATACATTGTGAATCGTGTC+CGG | + | chr8_4:32127505-32127524 | None:intergenic | 35.0% | |
| CACGATTCACAATGTATAGT+AGG | - | chr8_4:32127507-32127526 | Msa1323630:intron | 35.0% | |
| AACATAAGCCAAAAACTACG+CGG | + | chr8_4:32127713-32127732 | None:intergenic | 35.0% | |
| GGAAGAGAAATGAGAAATCA+TGG | + | chr8_4:32127867-32127886 | None:intergenic | 35.0% | |
| ATTTCATATATCACGGCTGT+TGG | - | chr8_4:32127940-32127959 | Msa1323630:intron | 35.0% | |
| ! | TAGTTTTCCTTTATCGTCTG+AGG | + | chr8_4:32128228-32128247 | None:intergenic | 35.0% |
| TTCAGGATTCTTGGAAATTC+TGG | - | chr8_4:32128296-32128315 | Msa1323630:CDS | 35.0% | |
| TTGGAAATTCTGGTGATCAA+TGG | - | chr8_4:32128306-32128325 | Msa1323630:CDS | 35.0% | |
| GCAATGTAATACATGGGATT+TGG | + | chr8_4:32128377-32128396 | None:intergenic | 35.0% | |
| ACATGACTGAATTATCCCAA+TGG | + | chr8_4:32128538-32128557 | None:intergenic | 35.0% | |
| AGTAACTTCGATGAAGGAGA+GGG | + | chr8_4:32124225-32124244 | None:intergenic | 40.0% | |
| TATTCGAGAATTAAGGGACG+AGG | + | chr8_4:32124400-32124419 | None:intergenic | 40.0% | |
| TTTCGTTACGTTGCAGAAGT+TGG | - | chr8_4:32124440-32124459 | Msa1323630:CDS | 40.0% | |
| AAGCGAATAACTTGAGTCCA+TGG | - | chr8_4:32124476-32124495 | Msa1323630:CDS | 40.0% | |
| AGAATGTGTGGAACATGTGA+AGG | - | chr8_4:32124513-32124532 | Msa1323630:CDS | 40.0% | |
| ! | TTGCCTTATTATGCTGCTCA+TGG | - | chr8_4:32124676-32124695 | Msa1323630:intron | 40.0% |
| ! | ATGGATTAATCTTTGGGGGT+TGG | - | chr8_4:32125008-32125027 | Msa1323630:intron | 40.0% |
| ! | TGGATTAATCTTTGGGGGTT+GGG | - | chr8_4:32125009-32125028 | Msa1323630:intron | 40.0% |
| TTCCCTTAACAGCATGCTTA+AGG | + | chr8_4:32125201-32125220 | None:intergenic | 40.0% | |
| ACTATATGCTTATTGTCCCC+AGG | - | chr8_4:32125547-32125566 | Msa1323630:intron | 40.0% | |
| CAACACTGGTGCAAGAATTA+AGG | + | chr8_4:32125690-32125709 | None:intergenic | 40.0% | |
| !!! | TTGCTTTTTGGTGAGGGATT+TGG | - | chr8_4:32125707-32125726 | Msa1323630:intron | 40.0% |
| CCTGCTAATGCCCAAAAATA+TGG | + | chr8_4:32125779-32125798 | None:intergenic | 40.0% | |
| !!! | CCATATTTTTGGGCATTAGC+AGG | - | chr8_4:32125776-32125795 | Msa1323630:intron | 40.0% |
| TTTAAACTGGGTTCTATGGC+TGG | + | chr8_4:32125953-32125972 | None:intergenic | 40.0% | |
| ! | TGTCTTGAATCTGGGGTATA+AGG | - | chr8_4:32125985-32126004 | Msa1323630:intron | 40.0% |
| TTTGATAAATGCCGGGTTTC+GGG | - | chr8_4:32126060-32126079 | Msa1323630:intron | 40.0% | |
| ATTGGCACCAGCTCATATTA+AGG | - | chr8_4:32126083-32126102 | Msa1323630:intron | 40.0% | |
| AAGAGTTGGCATGTTTCAGT+AGG | - | chr8_4:32126310-32126329 | Msa1323630:intron | 40.0% | |
| AGAGTTGGCATGTTTCAGTA+GGG | - | chr8_4:32126311-32126330 | Msa1323630:intron | 40.0% | |
| TGTTGGATGACCCATAACAT+TGG | - | chr8_4:32126487-32126506 | Msa1323630:intron | 40.0% | |
| TGACCCATAACATTGGAGAA+AGG | - | chr8_4:32126494-32126513 | Msa1323630:intron | 40.0% | |
| !!! | CTGTTTTAGCCCATTTTAGG+AGG | - | chr8_4:32126523-32126542 | Msa1323630:intron | 40.0% |
| TTCCAAGCTCCTCCTAAAAT+GGG | + | chr8_4:32126535-32126554 | None:intergenic | 40.0% | |
| TTTCCAAGCTCCTCCTAAAA+TGG | + | chr8_4:32126536-32126555 | None:intergenic | 40.0% | |
| !! | ATTTTAGGAGGAGCTTGGAA+AGG | - | chr8_4:32126535-32126554 | Msa1323630:intron | 40.0% |
| !! | AAAGGATCCATTGACTCTCA+AGG | - | chr8_4:32126553-32126572 | Msa1323630:intron | 40.0% |
| CAATGTACCTTGAGAGTCAA+TGG | + | chr8_4:32126563-32126582 | None:intergenic | 40.0% | |
| CATATCATCCTCATCACAAG+TGG | - | chr8_4:32126656-32126675 | Msa1323630:intron | 40.0% | |
| GATATTGTAGAAGTAGAGGG+TGG | + | chr8_4:32126807-32126826 | None:intergenic | 40.0% | |
| TGTCAAAAGCCTCTTTAACG+AGG | + | chr8_4:32126957-32126976 | None:intergenic | 40.0% | |
| ACTGGGAGCTAATGTAAGAA+AGG | + | chr8_4:32127068-32127087 | None:intergenic | 40.0% | |
| !! | CCAAACACATTTCAGGTTGA+AGG | + | chr8_4:32127118-32127137 | None:intergenic | 40.0% |
| CCTTCAACCTGAAATGTGTT+TGG | - | chr8_4:32127115-32127134 | Msa1323630:intron | 40.0% | |
| ATAGCAGACAGCATTAGGAT+TGG | + | chr8_4:32127321-32127340 | None:intergenic | 40.0% | |
| CATGAAGATGGATACAGCAT+TGG | + | chr8_4:32127368-32127387 | None:intergenic | 40.0% | |
| AGGAAATGAGCTATGAAGCA+CGG | - | chr8_4:32127464-32127483 | Msa1323630:intron | 40.0% | |
| ! | AGTTGTATCCGCGTAGTTTT+TGG | - | chr8_4:32127702-32127721 | Msa1323630:intron | 40.0% |
| ATTATGCAGGCATTTCCCAA+CGG | + | chr8_4:32128101-32128120 | None:intergenic | 40.0% | |
| ACAGACGAGGTAAATTATGC+AGG | + | chr8_4:32128114-32128133 | None:intergenic | 40.0% | |
| TTCAGATCCTCAGACGATAA+AGG | - | chr8_4:32128218-32128237 | Msa1323630:CDS | 40.0% | |
| AAAGAGGGATTCAGGATTCT+TGG | - | chr8_4:32128287-32128306 | Msa1323630:CDS | 40.0% | |
| TAACTTCGATGAAGGAGAGG+GGG | + | chr8_4:32124223-32124242 | None:intergenic | 45.0% | |
| GTAACTTCGATGAAGGAGAG+GGG | + | chr8_4:32124224-32124243 | None:intergenic | 45.0% | |
| CAGTAACTTCGATGAAGGAG+AGG | + | chr8_4:32124226-32124245 | None:intergenic | 45.0% | |
| TTGCAGAAGTTGGAGATTCG+CGG | - | chr8_4:32124450-32124469 | Msa1323630:CDS | 45.0% | |
| ! | TCTTTCGGCACAGTTTTCCA+TGG | + | chr8_4:32124496-32124515 | None:intergenic | 45.0% |
| AACTGTGCCGAAAGAATGTG+TGG | - | chr8_4:32124501-32124520 | Msa1323630:CDS | 45.0% | |
| ! | TAGCTGTGGCGGTGAATTTT+TGG | - | chr8_4:32124847-32124866 | Msa1323630:intron | 45.0% |
| ACCAATGTTCAAATCCCGGT+TGG | - | chr8_4:32125046-32125065 | Msa1323630:intron | 45.0% | |
| TCCAACCGGGATTTGAACAT+TGG | + | chr8_4:32125050-32125069 | None:intergenic | 45.0% | |
| AATGTGACACCTCTTCCAAC+CGG | + | chr8_4:32125064-32125083 | None:intergenic | 45.0% | |
| !! | GGAAGAGGTGTCACATTTAG+CGG | - | chr8_4:32125067-32125086 | Msa1323630:intron | 45.0% |
| CGGTTAGATATGGCTCGAAT+AGG | - | chr8_4:32125087-32125106 | Msa1323630:intron | 45.0% | |
| !!! | CTTGCACCAGTGTTGCTTTT+TGG | - | chr8_4:32125695-32125714 | Msa1323630:intron | 45.0% |
| !!! | ACCAGTGTTGCTTTTTGGTG+AGG | - | chr8_4:32125700-32125719 | Msa1323630:intron | 45.0% |
| !!! | CCAGTGTTGCTTTTTGGTGA+GGG | - | chr8_4:32125701-32125720 | Msa1323630:intron | 45.0% |
| TAAATGTGGTTGCAGGTTCG+AGG | - | chr8_4:32125880-32125899 | Msa1323630:intron | 45.0% | |
| ACCATGCGAAGTTTGATGAG+TGG | - | chr8_4:32125909-32125928 | Msa1323630:intron | 45.0% | |
| CCATGCGAAGTTTGATGAGT+GGG | - | chr8_4:32125910-32125929 | Msa1323630:intron | 45.0% | |
| AGGTCATTCTACTTACAGGG+CGG | - | chr8_4:32126005-32126024 | Msa1323630:intron | 45.0% | |
| CTCTCAAGGTACATTGCACT+TGG | - | chr8_4:32126567-32126586 | Msa1323630:intron | 45.0% | |
| TCAAGGTACATTGCACTTGG+TGG | - | chr8_4:32126570-32126589 | Msa1323630:intron | 45.0% | |
| ! | ATCACAAGTGGCTCTACCAT+GGG | - | chr8_4:32126668-32126687 | Msa1323630:intron | 45.0% |
| TCAAAACGGCCTCGTTAAAG+AGG | - | chr8_4:32126945-32126964 | Msa1323630:intron | 45.0% | |
| TGAGCTATGAAGCACGGATA+CGG | - | chr8_4:32127470-32127489 | Msa1323630:intron | 45.0% | |
| TACGCGGATACAACTGTGTT+TGG | + | chr8_4:32127697-32127716 | None:intergenic | 45.0% | |
| ACGGCTGTTGGTCATTAATG+TGG | - | chr8_4:32127952-32127971 | Msa1323630:intron | 45.0% | |
| ATCAGAGAAGAGAAGCGAGA+TGG | - | chr8_4:32128262-32128281 | Msa1323630:CDS | 45.0% | |
| AGAAGCGAGATGGAGAAAGA+GGG | - | chr8_4:32128272-32128291 | Msa1323630:CDS | 45.0% | |
| AGATGGAGAAAGAGGGATTC+AGG | - | chr8_4:32128279-32128298 | Msa1323630:CDS | 45.0% | |
| CATGGGATTTGGAAGCTTGA+AGG | + | chr8_4:32128366-32128385 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAATTCTAATTAT+AGG | - | chr8_4:32124918-32124937 | Msa1323630:intron | 5.0% |
| !! | AAAAAAAAATTCTAATTATA+GGG | - | chr8_4:32124919-32124938 | Msa1323630:intron | 5.0% |
| GTTGGGGGTTTCTTGAGAGA+AGG | + | chr8_4:32124365-32124384 | None:intergenic | 50.0% | |
| TTAAGGGACGAGGAAAACCG+TGG | + | chr8_4:32124390-32124409 | None:intergenic | 50.0% | |
| TGCAGAAGTTGGAGATTCGC+GGG | - | chr8_4:32124451-32124470 | Msa1323630:CDS | 50.0% | |
| ! | AATCTTTGGGGGTTGGGTCT+AGG | - | chr8_4:32125015-32125034 | Msa1323630:intron | 50.0% |
| ! | ATCTTTGGGGGTTGGGTCTA+GGG | - | chr8_4:32125016-32125035 | Msa1323630:intron | 50.0% |
| GGGGACCAATGTTCAAATCC+CGG | - | chr8_4:32125042-32125061 | Msa1323630:intron | 50.0% | |
| GTTCAAATCCCGGTTGGAAG+AGG | - | chr8_4:32125052-32125071 | Msa1323630:intron | 50.0% | |
| ATGTGACACCTCTTCCAACC+GGG | + | chr8_4:32125063-32125082 | None:intergenic | 50.0% | |
| CAGAACATTGGGTAGGCACT+AGG | - | chr8_4:32125444-32125463 | Msa1323630:intron | 50.0% | |
| CCCTCACCAAAAAGCAACAC+TGG | + | chr8_4:32125704-32125723 | None:intergenic | 50.0% | |
| CCCACTCATCAAACTTCGCA+TGG | + | chr8_4:32125913-32125932 | None:intergenic | 50.0% | |
| TGCGAAGTTTGATGAGTGGG+TGG | - | chr8_4:32125913-32125932 | Msa1323630:intron | 50.0% | |
| TTTGATGAGTGGGTGGAGCA+GGG | - | chr8_4:32125920-32125939 | Msa1323630:intron | 50.0% | |
| TCATTCTACTTACAGGGCGG+AGG | - | chr8_4:32126008-32126027 | Msa1323630:intron | 50.0% | |
| CATTCTACTTACAGGGCGGA+GGG | - | chr8_4:32126009-32126028 | Msa1323630:intron | 50.0% | |
| TAAATGCCGGGTTTCGGGAT+TGG | - | chr8_4:32126065-32126084 | Msa1323630:intron | 50.0% | |
| !! | AGCCCATTTTAGGAGGAGCT+TGG | - | chr8_4:32126530-32126549 | Msa1323630:intron | 50.0% |
| TGGTAGAGCCACTTGTGATG+AGG | + | chr8_4:32126667-32126686 | None:intergenic | 50.0% | |
| ! | CATCACAAGTGGCTCTACCA+TGG | - | chr8_4:32126667-32126686 | Msa1323630:intron | 50.0% |
| ! | TCACAAGTGGCTCTACCATG+GGG | - | chr8_4:32126669-32126688 | Msa1323630:intron | 50.0% |
| GAAGTAGAGGGTGGGTCAAA+GGG | + | chr8_4:32126798-32126817 | None:intergenic | 50.0% | |
| AGAAGTAGAGGGTGGGTCAA+AGG | + | chr8_4:32126799-32126818 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+TGG | - | chr8_4:32127476-32127495 | Msa1323630:intron | 50.0% | |
| GCAGAAACGAGACAGCATCA+GGG | + | chr8_4:32128168-32128187 | None:intergenic | 50.0% | |
| AGCAGAAACGAGACAGCATC+AGG | + | chr8_4:32128169-32128188 | None:intergenic | 50.0% | |
| GAGAAGCGAGATGGAGAAAG+AGG | - | chr8_4:32128271-32128290 | Msa1323630:CDS | 50.0% | |
| ! | GATGAAGGAGAGGGGGTGTA+AGG | + | chr8_4:32124216-32124235 | None:intergenic | 55.0% |
| CAAGAAACCCCCAACCACCA+CGG | - | chr8_4:32124370-32124389 | Msa1323630:exon | 55.0% | |
| AGGAAAACCGTGGTGGTTGG+GGG | + | chr8_4:32124380-32124399 | None:intergenic | 55.0% | |
| GAGGAAAACCGTGGTGGTTG+GGG | + | chr8_4:32124381-32124400 | None:intergenic | 55.0% | |
| CGAGGAAAACCGTGGTGGTT+GGG | + | chr8_4:32124382-32124401 | None:intergenic | 55.0% | |
| ACGAGGAAAACCGTGGTGGT+TGG | + | chr8_4:32124383-32124402 | None:intergenic | 55.0% | |
| ! | TCTTTGGGGGTTGGGTCTAG+GGG | - | chr8_4:32125017-32125036 | Msa1323630:intron | 55.0% |
| GTTTGATGAGTGGGTGGAGC+AGG | - | chr8_4:32125919-32125938 | Msa1323630:intron | 55.0% | |
| TTGATGAGTGGGTGGAGCAG+GGG | - | chr8_4:32125921-32125940 | Msa1323630:intron | 55.0% | |
| AGGGCGGAGGGAAAGTCATA+GGG | - | chr8_4:32126021-32126040 | Msa1323630:intron | 55.0% | |
| ! | CACAAGTGGCTCTACCATGG+GGG | - | chr8_4:32126670-32126689 | Msa1323630:intron | 55.0% |
| ACGGATACGGACATGGACAC+CGG | - | chr8_4:32127483-32127502 | Msa1323630:intron | 55.0% | |
| AGGGACGAGGAAAACCGTGG+TGG | + | chr8_4:32124387-32124406 | None:intergenic | 60.0% | |
| TGATGAGTGGGTGGAGCAGG+GGG | - | chr8_4:32125922-32125941 | Msa1323630:intron | 60.0% | |
| CAGGGCGGAGGGAAAGTCAT+AGG | - | chr8_4:32126020-32126039 | Msa1323630:intron | 60.0% | |
| ! | CTGGTGCCAATCCCGAAACC+CGG | + | chr8_4:32126074-32126093 | None:intergenic | 60.0% |
| TGGGGGTTGGGTCTAGGGGA+AGG | - | chr8_4:32125021-32125040 | Msa1323630:intron | 65.0% | |
| GGGGGTTGGGTCTAGGGGAA+GGG | - | chr8_4:32125022-32125041 | Msa1323630:intron | 65.0% | |
| GGGGTTGGGTCTAGGGGAAG+GGG | - | chr8_4:32125023-32125042 | Msa1323630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 32124205 | 32128572 | 32124205 | ID=Msa1323630;Name=Msa1323630 |
| chr8_4 | mRNA | 32124205 | 32128572 | 32124205 | ID=Msa1323630-mRNA-1;Parent=Msa1323630;Name=Msa1323630-mRNA-1;_AED=0.03;_eAED=0.03;_QI=105|1|1|1|1|1|3|172|260 |
| chr8_4 | exon | 32124205 | 32124554 | 32124205 | ID=Msa1323630-mRNA-1:exon:10444;Parent=Msa1323630-mRNA-1 |
| chr8_4 | exon | 32126673 | 32126882 | 32126673 | ID=Msa1323630-mRNA-1:exon:10443;Parent=Msa1323630-mRNA-1 |
| chr8_4 | exon | 32128073 | 32128572 | 32128073 | ID=Msa1323630-mRNA-1:exon:10442;Parent=Msa1323630-mRNA-1 |
| chr8_4 | five_prime_UTR | 32128468 | 32128572 | 32128468 | ID=Msa1323630-mRNA-1:five_prime_utr;Parent=Msa1323630-mRNA-1 |
| chr8_4 | CDS | 32128073 | 32128467 | 32128073 | ID=Msa1323630-mRNA-1:cds;Parent=Msa1323630-mRNA-1 |
| chr8_4 | CDS | 32126673 | 32126882 | 32126673 | ID=Msa1323630-mRNA-1:cds;Parent=Msa1323630-mRNA-1 |
| chr8_4 | CDS | 32124377 | 32124554 | 32124377 | ID=Msa1323630-mRNA-1:cds;Parent=Msa1323630-mRNA-1 |
| chr8_4 | three_prime_UTR | 32124205 | 32124376 | 32124205 | ID=Msa1323630-mRNA-1:three_prime_utr;Parent=Msa1323630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
