Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323780 | XP_013445314.1 | 98.649 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323780 | sp|Q9QWZ1|RAD1_MOUSE | 27.063 | 303 | 180 | 13 | 1 | 293 | 4 | 275 | 1.23e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323780 | A0A072U0N1 | 98.649 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0431770 | Msa1323780 | 0.802120 | 6.523748e-49 | -8.615850e-47 |
| Msa0337510 | Msa1323780 | 0.811638 | 6.333865e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323780 | MtrunA17_Chr8g0356441 | 98.649 | 296 | 4 | 0 | 1 | 296 | 1 | 296 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323780 | AT4G17760.1 | 71.331 | 293 | 83 | 1 | 4 | 296 | 9 | 300 | 1.91e-164 | 459 |
| Msa1323780 | AT4G17760.2 | 69.892 | 186 | 55 | 1 | 111 | 296 | 1 | 185 | 4.96e-95 | 278 |
Find 92 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTCCCATGCAACGGTTTC+AGG | 0.162062 | 8_4:+32429524 | None:intergenic |
| TATACCATTCTTCTCAGTTT+TGG | 0.234742 | 8_4:+32427988 | None:intergenic |
| AATTCATTAGTTCTGAATTC+TGG | 0.236063 | 8_4:-32427724 | Msa1323780:three_prime_UTR |
| GTTATTATTAGGTAGAATTA+AGG | 0.239418 | 8_4:-32428052 | Msa1323780:three_prime_UTR |
| GTACATACTCAGGATGAAAT+TGG | 0.247406 | 8_4:-32427909 | Msa1323780:three_prime_UTR |
| CCCTTTGACCTTTACTGTTC+AGG | 0.268886 | 8_4:-32429477 | Msa1323780:intron |
| CTAAATGAATTGTTATTATT+AGG | 0.270480 | 8_4:-32428063 | Msa1323780:exon |
| ATTATTTGAACTTGTTAAGT+TGG | 0.300527 | 8_4:+32432304 | None:intergenic |
| TGCAATGACACTTAATTATC+TGG | 0.329000 | 8_4:+32427854 | None:intergenic |
| GCTATGTAAGGAAAATTATA+AGG | 0.352972 | 8_4:+32428019 | None:intergenic |
| TCTGATCTCTGCACAAATAC+TGG | 0.365082 | 8_4:+32429556 | None:intergenic |
| AGTGTCATTGCACGGGAAAT+AGG | 0.367111 | 8_4:-32427843 | Msa1323780:three_prime_UTR |
| TTGAGGAGAAGCTGCATATC+AGG | 0.368769 | 8_4:+32431815 | None:intergenic |
| GATCTGGCTCCATAGTTATC+TGG | 0.370914 | 8_4:+32428626 | None:intergenic |
| GCAGAAGGACGACCTCGTTT+TGG | 0.381089 | 8_4:-32431923 | Msa1323780:CDS |
| TTGGTTTGAAAAGCTATGTA+AGG | 0.397877 | 8_4:+32428007 | None:intergenic |
| TCCAGTTCGCATAGAACGTC+TGG | 0.414965 | 8_4:+32432199 | None:intergenic |
| GATTAAAACGATGCCGTGTT+CGG | 0.422134 | 8_4:+32432102 | None:intergenic |
| ATCAAGCATCCAGATAACTA+TGG | 0.424375 | 8_4:-32428635 | Msa1323780:CDS |
| TTATTTGAACTTGTTAAGTT+GGG | 0.432091 | 8_4:+32432305 | None:intergenic |
| ATTTAGTCTTCACTTTCCTC+AGG | 0.432864 | 8_4:+32428080 | None:intergenic |
| CGTCCATTTCTGACATGGTC+GGG | 0.438244 | 8_4:+32432230 | None:intergenic |
| GCCTTAGTCTGCAGCACTAA+AGG | 0.450575 | 8_4:-32428686 | Msa1323780:intron |
| CATCCCGACCATGTCAGAAA+TGG | 0.450961 | 8_4:-32432233 | Msa1323780:exon |
| AGAGCAAGCAAGTTAAGCAT+TGG | 0.453888 | 8_4:-32428227 | Msa1323780:CDS |
| AATGTAACAGAAGGAGGATC+TGG | 0.473691 | 8_4:+32428610 | None:intergenic |
| GAGCAAGCAAGTTAAGCATT+GGG | 0.475187 | 8_4:-32428226 | Msa1323780:CDS |
| TTCTTCGTCCATTTCTGACA+TGG | 0.475461 | 8_4:+32432225 | None:intergenic |
| TACATACTCAGGATGAAATT+GGG | 0.477291 | 8_4:-32427908 | Msa1323780:three_prime_UTR |
| AATGTTAAAAGTGCAGCATC+TGG | 0.477607 | 8_4:-32428195 | Msa1323780:CDS |
| TCGTCCATTTCTGACATGGT+CGG | 0.479813 | 8_4:+32432229 | None:intergenic |
| CTTCAGATCTGTAGATTCGC+TGG | 0.480426 | 8_4:-32429582 | Msa1323780:intron |
| ATAAGCGTGAGAGGTAGGTT+TGG | 0.486372 | 8_4:+32428163 | None:intergenic |
| CAAACCAAAACTGAGAAGAA+TGG | 0.487296 | 8_4:-32427992 | Msa1323780:three_prime_UTR |
| GTTATTCAGATTCAATATCC+TGG | 0.487642 | 8_4:-32431839 | Msa1323780:CDS |
| CCTGAACAGTAAAGGTCAAA+GGG | 0.505595 | 8_4:+32429477 | None:intergenic |
| CTGAAATGCTACCAAGAGTT+CGG | 0.505766 | 8_4:+32428436 | None:intergenic |
| ATTGAGGATCTTGAATGGCC+TGG | 0.506692 | 8_4:-32428658 | Msa1323780:CDS |
| TGAAGGACATGGGGACCTGC+AGG | 0.506864 | 8_4:-32428581 | Msa1323780:intron |
| TAGCATTTCAGTGTGATCAC+CGG | 0.508883 | 8_4:-32428424 | Msa1323780:CDS |
| ACCAGACGTTCTATGCGAAC+TGG | 0.510099 | 8_4:-32432200 | Msa1323780:CDS |
| AACTAATGAATTAACATGCA+TGG | 0.513552 | 8_4:+32427735 | None:intergenic |
| GTTATCTGGATGCTTGATCC+AGG | 0.519897 | 8_4:+32428640 | None:intergenic |
| ATGGCATACCTGAACAGTAA+AGG | 0.520495 | 8_4:+32429469 | None:intergenic |
| CACGCTTATGTCGATTCTGC+CGG | 0.524198 | 8_4:-32428149 | Msa1323780:CDS |
| AAGTGGTTGTCTTCAAGCAA+AGG | 0.524384 | 8_4:-32432071 | Msa1323780:CDS |
| TCGACCAGGTTGCTGATAGC+CGG | 0.525487 | 8_4:+32428130 | None:intergenic |
| GATAATTAAGTGTCATTGCA+CGG | 0.526146 | 8_4:-32427851 | Msa1323780:three_prime_UTR |
| AGCACTAAAGGAAGCTATTG+AGG | 0.528126 | 8_4:-32428674 | Msa1323780:CDS |
| ACGCTCTAACCGCCGTTCGA+TGG | 0.529777 | 8_4:-32432156 | Msa1323780:CDS |
| ACCTGAACAGTAAAGGTCAA+AGG | 0.531404 | 8_4:+32429476 | None:intergenic |
| ACATTGAGAGCTGAAGGACA+TGG | 0.533667 | 8_4:-32428592 | Msa1323780:CDS |
| GTCAAAGGGTTAGTCCCAGC+AGG | 0.538849 | 8_4:+32429491 | None:intergenic |
| AGAGTTCTATGACGGCGTCT+TGG | 0.544782 | 8_4:+32432125 | None:intergenic |
| GATTCCTGAAACCGTTGCAT+GGG | 0.550720 | 8_4:-32429528 | Msa1323780:CDS |
| GGATTCCTGAAACCGTTGCA+TGG | 0.552682 | 8_4:-32429529 | Msa1323780:CDS |
| TTGTGCGAATTCCGAACTCT+TGG | 0.553644 | 8_4:-32428447 | Msa1323780:CDS |
| TCTGTTACATTGAGAGCTGA+AGG | 0.555436 | 8_4:-32428598 | Msa1323780:CDS |
| TTGGTGGCGCTTCCATCGAA+CGG | 0.556421 | 8_4:+32432144 | None:intergenic |
| ATAATTAAGTGTCATTGCAC+GGG | 0.562610 | 8_4:-32427850 | Msa1323780:three_prime_UTR |
| TGCGAACTGGAAAACGTACA+AGG | 0.564049 | 8_4:-32432187 | Msa1323780:CDS |
| AGCATTTCAGTGTGATCACC+GGG | 0.564504 | 8_4:-32428423 | Msa1323780:CDS |
| TCGACATAAGCGTGAGAGGT+AGG | 0.565313 | 8_4:+32428158 | None:intergenic |
| CATTCAAGCATACAACATGC+AGG | 0.573734 | 8_4:+32427682 | None:intergenic |
| TGGCAAACACAAGAGGCGTA+TGG | 0.579804 | 8_4:+32427874 | None:intergenic |
| AAGCTATTGAGGATCTTGAA+TGG | 0.582081 | 8_4:-32428663 | Msa1323780:CDS |
| ATTAATACTTGAAAGAAGCC+CGG | 0.583729 | 8_4:+32428405 | None:intergenic |
| CATTGAGAGCTGAAGGACAT+GGG | 0.592060 | 8_4:-32428591 | Msa1323780:CDS |
| TGAATTCTTTGTGAAACCTG+AGG | 0.592342 | 8_4:-32428096 | Msa1323780:CDS |
| GTCATAGAACTCTCCGAACA+CGG | 0.593745 | 8_4:-32432115 | Msa1323780:CDS |
| AGCAAGTTAAGCATTGGGAG+AGG | 0.601192 | 8_4:-32428221 | Msa1323780:CDS |
| GCTCTCAATGTAACAGAAGG+AGG | 0.601673 | 8_4:+32428604 | None:intergenic |
| TCAATATGAGCTATTCGACC+AGG | 0.602194 | 8_4:+32428116 | None:intergenic |
| CGATATGATTACAATGCAGA+AGG | 0.602790 | 8_4:-32431938 | Msa1323780:CDS |
| TCAGCTCTCAATGTAACAGA+AGG | 0.603298 | 8_4:+32428601 | None:intergenic |
| AGAAGCTGCATATCAGGACC+AGG | 0.605824 | 8_4:+32431821 | None:intergenic |
| ACAAGACAAAGTACATACTC+AGG | 0.611174 | 8_4:-32427919 | Msa1323780:three_prime_UTR |
| AAAATTGTAGTCCCATGCAA+CGG | 0.611318 | 8_4:+32429517 | None:intergenic |
| AGAATCGACATAAGCGTGAG+AGG | 0.616523 | 8_4:+32428154 | None:intergenic |
| TCTACTTCATGTCAATGTAG+TGG | 0.617891 | 8_4:+32427784 | None:intergenic |
| AAGTTAAGCATTGGGAGAGG+TGG | 0.624290 | 8_4:-32428218 | Msa1323780:CDS |
| AATTATCTGGCAAACACAAG+AGG | 0.625746 | 8_4:+32427867 | None:intergenic |
| AGTTTGCAGAGAACGAACAG+AGG | 0.629061 | 8_4:-32432260 | Msa1323780:five_prime_UTR |
| GTGTTCGGAGAGTTCTATGA+CGG | 0.640641 | 8_4:+32432117 | None:intergenic |
| GTTTGCAGAGAACGAACAGA+GGG | 0.650361 | 8_4:-32432259 | Msa1323780:five_prime_UTR |
| TATTAGAAGTTGATGCTCTG+AGG | 0.660938 | 8_4:+32428276 | None:intergenic |
| TCTGCCGGCTATCAGCAACC+TGG | 0.662037 | 8_4:-32428134 | Msa1323780:CDS |
| TGAATAACACCAGAATGACC+AGG | 0.667670 | 8_4:+32431854 | None:intergenic |
| CCTAAACTCACACCAAAACG+AGG | 0.678815 | 8_4:+32431911 | None:intergenic |
| ATTGAGAGCTGAAGGACATG+GGG | 0.686071 | 8_4:-32428590 | Msa1323780:CDS |
| TTTGTGCAGAGATCAGAACA+AGG | 0.733824 | 8_4:-32429550 | Msa1323780:CDS |
| TTAAATGATGTATTTCACTG+TGG | 0.782563 | 8_4:-32427812 | Msa1323780:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTGTGTATTTGAAT+GGG | + | chr8_4:32428186-32428205 | None:intergenic | 15.0% |
| !! | TGTTAAATATAAAGTAGTTT+CGG | - | chr8_4:32428748-32428767 | Msa1323780:intron | 15.0% |
| !! | ACCAAAATGAAATAAAATAT+TGG | - | chr8_4:32429156-32429175 | Msa1323780:intron | 15.0% |
| !! | ATAAAACAAATATGATATAG+AGG | + | chr8_4:32429471-32429490 | None:intergenic | 15.0% |
| !! | ATAAAGAAATTTAAATTCTG+TGG | + | chr8_4:32430244-32430263 | None:intergenic | 15.0% |
| !!! | CTAAATGAATTGTTATTATT+AGG | - | chr8_4:32431875-32431894 | Msa1323780:CDS | 15.0% |
| !! | AGTAAGAAAATTGAAGAAAT+TGG | + | chr8_4:32427913-32427932 | None:intergenic | 20.0% |
| !!! | CTATATTTTGTGTATTTGAA+TGG | + | chr8_4:32428187-32428206 | None:intergenic | 20.0% |
| !!! | TATAAGTTTTACTAAAACCA+CGG | + | chr8_4:32428272-32428291 | None:intergenic | 20.0% |
| !! | ACTGTTAGATTAAAATTGTA+AGG | + | chr8_4:32428933-32428952 | None:intergenic | 20.0% |
| !!! | GCCAATATTTTATTTCATTT+TGG | + | chr8_4:32429160-32429179 | None:intergenic | 20.0% |
| !! | AATGAAATAAAATATTGGCA+AGG | - | chr8_4:32429161-32429180 | Msa1323780:intron | 20.0% |
| !!! | GTATATTGTTTTTACTCTTT+GGG | + | chr8_4:32429543-32429562 | None:intergenic | 20.0% |
| !!! | AGTATATTGTTTTTACTCTT+TGG | + | chr8_4:32429544-32429563 | None:intergenic | 20.0% |
| !!! | AGCTATAAATGACAATTTTA+TGG | + | chr8_4:32429757-32429776 | None:intergenic | 20.0% |
| !!! | TAAATCCAAAATTTTGTAGA+GGG | + | chr8_4:32430593-32430612 | None:intergenic | 20.0% |
| !!! | TTAAATCCAAAATTTTGTAG+AGG | + | chr8_4:32430594-32430613 | None:intergenic | 20.0% |
| !!! | AACCATAGAATCATTTTAAT+TGG | - | chr8_4:32431192-32431211 | Msa1323780:intron | 20.0% |
| !!! | ACCATAGAATCATTTTAATT+GGG | - | chr8_4:32431193-32431212 | Msa1323780:intron | 20.0% |
| !! | AATATAATGAATTCAAAGTG+CGG | + | chr8_4:32431430-32431449 | None:intergenic | 20.0% |
| !! | GTTATTATTAGGTAGAATTA+AGG | - | chr8_4:32431886-32431905 | Msa1323780:CDS | 20.0% |
| ! | AAAGGTTTATCTCAAAAAAG+AGG | - | chr8_4:32427885-32427904 | Msa1323780:three_prime_UTR | 25.0% |
| !!! | ACTACATTTTTATTTCACTG+TGG | - | chr8_4:32428209-32428228 | Msa1323780:CDS | 25.0% |
| !!! | GCTATTTTCAAAAGCTATTT+TGG | - | chr8_4:32428476-32428495 | Msa1323780:intron | 25.0% |
| ! | ACTTATTTGAGCTTATCTAT+TGG | + | chr8_4:32428592-32428611 | None:intergenic | 25.0% |
| ! | ATATAGATCCTTATTGGAAA+TGG | + | chr8_4:32429083-32429102 | None:intergenic | 25.0% |
| ! | TTCAACATATAGATCCTTAT+TGG | + | chr8_4:32429089-32429108 | None:intergenic | 25.0% |
| ! | AAGGATCTATATGTTGAATT+AGG | - | chr8_4:32429091-32429110 | Msa1323780:intron | 25.0% |
| ! | TTGCCTATAGTATATTGAAA+TGG | + | chr8_4:32429303-32429322 | None:intergenic | 25.0% |
| !!! | ATGATTTGCTTTATTATCTG+AGG | - | chr8_4:32429492-32429511 | Msa1323780:CDS | 25.0% |
| ! | GAAAACTAATTAGATGTAGA+AGG | + | chr8_4:32430107-32430126 | None:intergenic | 25.0% |
| ! | GAAATCCAATTAGAATTTGT+CGG | - | chr8_4:32430177-32430196 | Msa1323780:intron | 25.0% |
| !! | CTTTATCAAGTAAGAACTTT+TGG | - | chr8_4:32430258-32430277 | Msa1323780:intron | 25.0% |
| ! | CCAATAAATGACCATTAATT+TGG | + | chr8_4:32430314-32430333 | None:intergenic | 25.0% |
| ! | CCAAATTAATGGTCATTTAT+TGG | - | chr8_4:32430311-32430330 | Msa1323780:intron | 25.0% |
| ! | TTAATGTGATAGTTCAATGA+TGG | - | chr8_4:32430610-32430629 | Msa1323780:intron | 25.0% |
| ! | TCATTCAACCATTATATTAC+TGG | - | chr8_4:32430679-32430698 | Msa1323780:intron | 25.0% |
| ! | ACTAGTAACCAGTAATATAA+TGG | + | chr8_4:32430690-32430709 | None:intergenic | 25.0% |
| !! | CAAACAACTTTTCATATAAG+TGG | - | chr8_4:32431074-32431093 | Msa1323780:intron | 25.0% |
| ! | TCCCAATTAAAATGATTCTA+TGG | + | chr8_4:32431197-32431216 | None:intergenic | 25.0% |
| !!! | TTTTCTTTGATAACACTACT+AGG | + | chr8_4:32431690-32431709 | None:intergenic | 25.0% |
| ! | GCTATGTAAGGAAAATTATA+AGG | + | chr8_4:32431922-32431941 | None:intergenic | 25.0% |
| ! | TTAAATGATGTATTTCACTG+TGG | - | chr8_4:32432126-32432145 | Msa1323780:CDS | 25.0% |
| ! | AACTAATGAATTAACATGCA+TGG | + | chr8_4:32432206-32432225 | None:intergenic | 25.0% |
| !!! | AATTCATTAGTTCTGAATTC+TGG | - | chr8_4:32432214-32432233 | Msa1323780:CDS | 25.0% |
| !! | GTTTTAATCGTTGAAGAAAG+TGG | - | chr8_4:32427850-32427869 | Msa1323780:three_prime_UTR | 30.0% |
| GTTATTCAGATTCAATATCC+TGG | - | chr8_4:32428099-32428118 | Msa1323780:CDS | 30.0% | |
| ! | TATTTGGAATGACAGTAAGT+AGG | + | chr8_4:32428337-32428356 | None:intergenic | 30.0% |
| AAACATGCCCTTAGTATATT+TGG | - | chr8_4:32428618-32428637 | Msa1323780:CDS | 30.0% | |
| CACAGTTCCAAATATACTAA+GGG | + | chr8_4:32428628-32428647 | None:intergenic | 30.0% | |
| ! | TGAGTGTTTAGAACCAAAAT+AGG | + | chr8_4:32428720-32428739 | None:intergenic | 30.0% |
| TGAACTGTCTGATTAAGTTT+AGG | - | chr8_4:32428883-32428902 | Msa1323780:intron | 30.0% | |
| ! | CTGCCATTTCAATATACTAT+AGG | - | chr8_4:32429297-32429316 | Msa1323780:intron | 30.0% |
| !! | TTTACTCTTTGGGTTGATAT+AGG | + | chr8_4:32429533-32429552 | None:intergenic | 30.0% |
| CACTGCTTACTATATAAGAA+TGG | + | chr8_4:32429718-32429737 | None:intergenic | 30.0% | |
| TATAGTAAGCAGTGTATTGA+TGG | - | chr8_4:32429724-32429743 | Msa1323780:intron | 30.0% | |
| CTATCAGTGTTGTCAAATAT+TGG | + | chr8_4:32429872-32429891 | None:intergenic | 30.0% | |
| !! | ATTTTTCAACTACTCATGTG+TGG | + | chr8_4:32429935-32429954 | None:intergenic | 30.0% |
| CTTCATTGATAGGTATTTAG+AGG | + | chr8_4:32429981-32430000 | None:intergenic | 30.0% | |
| TTTCTTGATACTCGATATCA+GGG | + | chr8_4:32430008-32430027 | None:intergenic | 30.0% | |
| ATTTCTTGATACTCGATATC+AGG | + | chr8_4:32430009-32430028 | None:intergenic | 30.0% | |
| GAATTTGTGACTGTCATAAA+TGG | + | chr8_4:32430037-32430056 | None:intergenic | 30.0% | |
| AAGTTCCGACAAATTCTAAT+TGG | + | chr8_4:32430185-32430204 | None:intergenic | 30.0% | |
| AGATGTAATTCCTTTCAGAA+TGG | - | chr8_4:32430285-32430304 | Msa1323780:intron | 30.0% | |
| AATAATGACCTAGTATCCTT+TGG | - | chr8_4:32430516-32430535 | Msa1323780:intron | 30.0% | |
| ! | GATAGTTCAATGATGGAAAT+TGG | - | chr8_4:32430617-32430636 | Msa1323780:intron | 30.0% |
| ! | GAAAAACTGTTGCTTGTATA+CGG | - | chr8_4:32430940-32430959 | Msa1323780:intron | 30.0% |
| ! | ATTTGAAATTTGAGCCAAAC+TGG | - | chr8_4:32431230-32431249 | Msa1323780:intron | 30.0% |
| ATTAATACTTGAAAGAAGCC+CGG | + | chr8_4:32431536-32431555 | None:intergenic | 30.0% | |
| ! | TTGGTTTGAAAAGCTATGTA+AGG | + | chr8_4:32431934-32431953 | None:intergenic | 30.0% |
| ! | TATACCATTCTTCTCAGTTT+TGG | + | chr8_4:32431953-32431972 | None:intergenic | 30.0% |
| TACATACTCAGGATGAAATT+GGG | - | chr8_4:32432030-32432049 | Msa1323780:intron | 30.0% | |
| TGCAATGACACTTAATTATC+TGG | + | chr8_4:32432087-32432106 | None:intergenic | 30.0% | |
| ! | GATAATTAAGTGTCATTGCA+CGG | - | chr8_4:32432087-32432106 | Msa1323780:CDS | 30.0% |
| ! | ATAATTAAGTGTCATTGCAC+GGG | - | chr8_4:32432088-32432107 | Msa1323780:CDS | 30.0% |
| CGATATGATTACAATGCAGA+AGG | - | chr8_4:32428000-32428019 | Msa1323780:three_prime_UTR | 35.0% | |
| ! | TGATTGTTTGAACGCGTTTT+CGG | - | chr8_4:32428059-32428078 | Msa1323780:three_prime_UTR | 35.0% |
| TGACAGTTAGAACATACTTG+AGG | + | chr8_4:32428143-32428162 | None:intergenic | 35.0% | |
| TTAAGCCCTGTTTGGATAAA+CGG | - | chr8_4:32428362-32428381 | Msa1323780:intron | 35.0% | |
| ATAAGCCGTTTATCCAAACA+GGG | + | chr8_4:32428370-32428389 | None:intergenic | 35.0% | |
| AATAAGCCGTTTATCCAAAC+AGG | + | chr8_4:32428371-32428390 | None:intergenic | 35.0% | |
| CAGCTTATGTACAATGTCAT+AGG | - | chr8_4:32428524-32428543 | Msa1323780:intron | 35.0% | |
| TAAGTTCTGTGAGACTGTTT+AGG | + | chr8_4:32428567-32428586 | None:intergenic | 35.0% | |
| CCACAGTTCCAAATATACTA+AGG | + | chr8_4:32428629-32428648 | None:intergenic | 35.0% | |
| ! | CCTTAGTATATTTGGAACTG+TGG | - | chr8_4:32428626-32428645 | Msa1323780:CDS | 35.0% |
| ATAGGTAACCAAGCAACTAA+CGG | + | chr8_4:32428702-32428721 | None:intergenic | 35.0% | |
| ! | AGTTGCTTGGTTACCTATTT+TGG | - | chr8_4:32428704-32428723 | Msa1323780:intron | 35.0% |
| ! | GTTTAGGCGATTTGAAATGT+TGG | - | chr8_4:32428899-32428918 | Msa1323780:intron | 35.0% |
| TGAATGATTGCGTGAATGTA+GGG | - | chr8_4:32428958-32428977 | Msa1323780:intron | 35.0% | |
| TGCGTACATGACATTCAATA+TGG | - | chr8_4:32429030-32429049 | Msa1323780:intron | 35.0% | |
| CATGCTTTCCATTTCCAATA+AGG | - | chr8_4:32429072-32429091 | Msa1323780:intron | 35.0% | |
| ! | GTGTTTATAGGGAAGGTTTT+TGG | - | chr8_4:32429369-32429388 | Msa1323780:intron | 35.0% |
| CATTAATAGAAGGGTCTACA+AGG | + | chr8_4:32429626-32429645 | None:intergenic | 35.0% | |
| CGGGCAAAACATTAATAGAA+GGG | + | chr8_4:32429635-32429654 | None:intergenic | 35.0% | |
| TAATGTACGAGAAGTGAGAA+AGG | + | chr8_4:32429663-32429682 | None:intergenic | 35.0% | |
| TTTCTCACTTCTCGTACATT+AGG | - | chr8_4:32429662-32429681 | Msa1323780:intron | 35.0% | |
| !!! | AGATTTTTTGAGAACTGCCA+TGG | + | chr8_4:32429829-32429848 | None:intergenic | 35.0% |
| ! | AATTTGACTTAAACCGTGAC+AGG | + | chr8_4:32430070-32430089 | None:intergenic | 35.0% |
| AATTTGGCTACCATTCTGAA+AGG | + | chr8_4:32430298-32430317 | None:intergenic | 35.0% | |
| CAGAATGGTAGCCAAATTAA+TGG | - | chr8_4:32430300-32430319 | Msa1323780:intron | 35.0% | |
| AATCTACAGATCTGAAGATG+TGG | + | chr8_4:32430353-32430372 | None:intergenic | 35.0% | |
| AAAATTGTAGTCCCATGCAA+CGG | + | chr8_4:32430424-32430443 | None:intergenic | 35.0% | |
| ! | ACTACAATTTTGAACCTGCT+GGG | - | chr8_4:32430433-32430452 | Msa1323780:intron | 35.0% |
| ! | TGCAACGGTAGAGAATTTTA+TGG | + | chr8_4:32430491-32430510 | None:intergenic | 35.0% |
| GTGCTGTGCAGTAAAAAATT+TGG | - | chr8_4:32430779-32430798 | Msa1323780:intron | 35.0% | |
| CTGTGCAGTAAAAAATTTGG+AGG | - | chr8_4:32430782-32430801 | Msa1323780:intron | 35.0% | |
| TTTCTCCATGTATCAATTGC+AGG | + | chr8_4:32430924-32430943 | None:intergenic | 35.0% | |
| AATTACACCTAGAGCTAGTT+TGG | - | chr8_4:32430985-32431004 | Msa1323780:intron | 35.0% | |
| ! | AGTTTATCCAAACTAGCTCT+AGG | + | chr8_4:32430995-32431014 | None:intergenic | 35.0% |
| AAGCTATTGAGGATCTTGAA+TGG | - | chr8_4:32431275-32431294 | Msa1323780:intron | 35.0% | |
| ATCAAGCATCCAGATAACTA+TGG | - | chr8_4:32431303-32431322 | Msa1323780:intron | 35.0% | |
| TGTATTGCTTTCGACTCAAA+TGG | - | chr8_4:32431382-32431401 | Msa1323780:intron | 35.0% | |
| GTATTGCTTTCGACTCAAAT+GGG | - | chr8_4:32431383-32431402 | Msa1323780:intron | 35.0% | |
| ! | ATCTGTCATTTCGTTGCTTA+TGG | - | chr8_4:32431615-32431634 | Msa1323780:intron | 35.0% |
| TCGTTGCTTATGGTTATAAC+AGG | - | chr8_4:32431625-32431644 | Msa1323780:intron | 35.0% | |
| !! | TATTAGAAGTTGATGCTCTG+AGG | + | chr8_4:32431665-32431684 | None:intergenic | 35.0% |
| ! | AATGTTAAAAGTGCAGCATC+TGG | - | chr8_4:32431743-32431762 | Msa1323780:intron | 35.0% |
| TGAATTCTTTGTGAAACCTG+AGG | - | chr8_4:32431842-32431861 | Msa1323780:CDS | 35.0% | |
| ! | ATTTAGTCTTCACTTTCCTC+AGG | + | chr8_4:32431861-32431880 | None:intergenic | 35.0% |
| CAAACCAAAACTGAGAAGAA+TGG | - | chr8_4:32431946-32431965 | Msa1323780:CDS | 35.0% | |
| ACAAGACAAAGTACATACTC+AGG | - | chr8_4:32432019-32432038 | Msa1323780:intron | 35.0% | |
| GTACATACTCAGGATGAAAT+TGG | - | chr8_4:32432029-32432048 | Msa1323780:intron | 35.0% | |
| AATTATCTGGCAAACACAAG+AGG | + | chr8_4:32432074-32432093 | None:intergenic | 35.0% | |
| TCTACTTCATGTCAATGTAG+TGG | + | chr8_4:32432157-32432176 | None:intergenic | 35.0% | |
| TTCTTCGTCCATTTCTGACA+TGG | + | chr8_4:32427716-32427735 | None:intergenic | 40.0% | |
| GATTAAAACGATGCCGTGTT+CGG | + | chr8_4:32427839-32427858 | None:intergenic | 40.0% | |
| AAGTGGTTGTCTTCAAGCAA+AGG | - | chr8_4:32427867-32427886 | Msa1323780:three_prime_UTR | 40.0% | |
| !! | CTCGTTTTGGTGTGAGTTTA+GGG | - | chr8_4:32428028-32428047 | Msa1323780:three_prime_UTR | 40.0% |
| TGAATAACACCAGAATGACC+AGG | + | chr8_4:32428087-32428106 | None:intergenic | 40.0% | |
| ! | TATTTCACTGTGGAGTGTCA+CGG | - | chr8_4:32428219-32428238 | Msa1323780:CDS | 40.0% |
| ACAGGGCTTAAGTGCATATT+TGG | + | chr8_4:32428353-32428372 | None:intergenic | 40.0% | |
| ATATGCACTTAAGCCCTGTT+TGG | - | chr8_4:32428354-32428373 | Msa1323780:intron | 40.0% | |
| TGATTTCGTGTCTCGAGAAA+GGG | - | chr8_4:32428649-32428668 | Msa1323780:CDS | 40.0% | |
| CATTCACGCAATCATTCACT+TGG | + | chr8_4:32428956-32428975 | None:intergenic | 40.0% | |
| GTGAATGATTGCGTGAATGT+AGG | - | chr8_4:32428957-32428976 | Msa1323780:intron | 40.0% | |
| TGTCATGTACGCAACTTGTA+TGG | + | chr8_4:32429023-32429042 | None:intergenic | 40.0% | |
| TTAGGTAGTTGAGACTTGAC+AGG | - | chr8_4:32429109-32429128 | Msa1323780:intron | 40.0% | |
| TAGTTGAGACTTGACAGGTT+TGG | - | chr8_4:32429114-32429133 | Msa1323780:intron | 40.0% | |
| AATCCCCATGAATTTGTAGC+TGG | - | chr8_4:32429187-32429206 | Msa1323780:intron | 40.0% | |
| CATCCAGCTACAAATTCATG+GGG | + | chr8_4:32429193-32429212 | None:intergenic | 40.0% | |
| GCATCCAGCTACAAATTCAT+GGG | + | chr8_4:32429194-32429213 | None:intergenic | 40.0% | |
| TGCATCCAGCTACAAATTCA+TGG | + | chr8_4:32429195-32429214 | None:intergenic | 40.0% | |
| GTACACATCTGTACACAAGA+TGG | - | chr8_4:32429229-32429248 | Msa1323780:intron | 40.0% | |
| TTGTGATGAGACATCCATCA+TGG | - | chr8_4:32429324-32429343 | Msa1323780:intron | 40.0% | |
| ! | ACTTGATGCAGTGTTGTTGA+TGG | + | chr8_4:32429419-32429438 | None:intergenic | 40.0% |
| !! | AGGAGCTTTGGGACTAAATT+TGG | + | chr8_4:32429606-32429625 | None:intergenic | 40.0% |
| GCGGGCAAAACATTAATAGA+AGG | + | chr8_4:32429636-32429655 | None:intergenic | 40.0% | |
| ! | AGTAAGCAGTGTATTGATGG+CGG | - | chr8_4:32429727-32429746 | Msa1323780:intron | 40.0% |
| ACATCTGCCATAAAACGTCA+GGG | - | chr8_4:32429780-32429799 | Msa1323780:intron | 40.0% | |
| TTGTCAAATATTGGCCATGG+CGG | + | chr8_4:32429863-32429882 | None:intergenic | 40.0% | |
| GTGTTGTCAAATATTGGCCA+TGG | + | chr8_4:32429866-32429885 | None:intergenic | 40.0% | |
| TCAGGGTGATCTTCATTGAT+AGG | + | chr8_4:32429991-32430010 | None:intergenic | 40.0% | |
| TCTGATCTCTGCACAAATAC+TGG | + | chr8_4:32430385-32430404 | None:intergenic | 40.0% | |
| TTTGTGCAGAGATCAGAACA+AGG | - | chr8_4:32430388-32430407 | Msa1323780:intron | 40.0% | |
| ! | GACTACAATTTTGAACCTGC+TGG | - | chr8_4:32430432-32430451 | Msa1323780:intron | 40.0% |
| CCTGAACAGTAAAGGTCAAA+GGG | + | chr8_4:32430464-32430483 | None:intergenic | 40.0% | |
| ACCTGAACAGTAAAGGTCAA+AGG | + | chr8_4:32430465-32430484 | None:intergenic | 40.0% | |
| ATGGCATACCTGAACAGTAA+AGG | + | chr8_4:32430472-32430491 | None:intergenic | 40.0% | |
| GGTCATTATTCAAGCTGCAA+CGG | + | chr8_4:32430506-32430525 | None:intergenic | 40.0% | |
| AACGACATCCAAAGGATACT+AGG | + | chr8_4:32430527-32430546 | None:intergenic | 40.0% | |
| TAGTATCCTTTGGATGTCGT+TGG | - | chr8_4:32430526-32430545 | Msa1323780:intron | 40.0% | |
| GAAAATCCAACGACATCCAA+AGG | + | chr8_4:32430535-32430554 | None:intergenic | 40.0% | |
| ! | AGGGTCCCTCTACAAAATTT+TGG | - | chr8_4:32430585-32430604 | Msa1323780:intron | 40.0% |
| AGCACTAAAGGAAGCTATTG+AGG | - | chr8_4:32431264-32431283 | Msa1323780:intron | 40.0% | |
| AATGTAACAGAAGGAGGATC+TGG | + | chr8_4:32431331-32431350 | None:intergenic | 40.0% | |
| TCAGCTCTCAATGTAACAGA+AGG | + | chr8_4:32431340-32431359 | None:intergenic | 40.0% | |
| TCTGTTACATTGAGAGCTGA+AGG | - | chr8_4:32431340-32431359 | Msa1323780:intron | 40.0% | |
| CTGAAATGCTACCAAGAGTT+CGG | + | chr8_4:32431505-32431524 | None:intergenic | 40.0% | |
| TAGCATTTCAGTGTGATCAC+CGG | - | chr8_4:32431514-32431533 | Msa1323780:intron | 40.0% | |
| ATAAGTCGATGGCTGGTAAA+TGG | + | chr8_4:32431597-32431616 | None:intergenic | 40.0% | |
| CGAAATGACAGATAAGTCGA+TGG | + | chr8_4:32431608-32431627 | None:intergenic | 40.0% | |
| AGAGCAAGCAAGTTAAGCAT+TGG | - | chr8_4:32431711-32431730 | Msa1323780:intron | 40.0% | |
| GAGCAAGCAAGTTAAGCATT+GGG | - | chr8_4:32431712-32431731 | Msa1323780:intron | 40.0% | |
| TCAATATGAGCTATTCGACC+AGG | + | chr8_4:32431825-32431844 | None:intergenic | 40.0% | |
| CATTCAAGCATACAACATGC+AGG | + | chr8_4:32432259-32432278 | None:intergenic | 40.0% | |
| AGTTTGCAGAGAACGAACAG+AGG | - | chr8_4:32427678-32427697 | Msa1323780:three_prime_UTR | 45.0% | |
| GTTTGCAGAGAACGAACAGA+GGG | - | chr8_4:32427679-32427698 | Msa1323780:three_prime_UTR | 45.0% | |
| TCGTCCATTTCTGACATGGT+CGG | + | chr8_4:32427712-32427731 | None:intergenic | 45.0% | |
| TGCGAACTGGAAAACGTACA+AGG | - | chr8_4:32427751-32427770 | Msa1323780:three_prime_UTR | 45.0% | |
| GTGTTCGGAGAGTTCTATGA+CGG | + | chr8_4:32427824-32427843 | None:intergenic | 45.0% | |
| GTCATAGAACTCTCCGAACA+CGG | - | chr8_4:32427823-32427842 | Msa1323780:three_prime_UTR | 45.0% | |
| CCTAAACTCACACCAAAACG+AGG | + | chr8_4:32428030-32428049 | None:intergenic | 45.0% | |
| !! | CCTCGTTTTGGTGTGAGTTT+AGG | - | chr8_4:32428027-32428046 | Msa1323780:three_prime_UTR | 45.0% |
| ! | TTTTCGGTTCCTGGTCATTC+TGG | - | chr8_4:32428075-32428094 | Msa1323780:exon | 45.0% |
| TTGAGGAGAAGCTGCATATC+AGG | + | chr8_4:32428126-32428145 | None:intergenic | 45.0% | |
| GTGATTTCGTGTCTCGAGAA+AGG | - | chr8_4:32428648-32428667 | Msa1323780:CDS | 45.0% | |
| GATTTCGTGTCTCGAGAAAG+GGG | - | chr8_4:32428650-32428669 | Msa1323780:CDS | 45.0% | |
| GAGAAAGGGGAACTACAACT+TGG | - | chr8_4:32428663-32428682 | Msa1323780:CDS | 45.0% | |
| CGAACTAGATTCCCGATAGT+CGG | - | chr8_4:32428829-32428848 | Msa1323780:intron | 45.0% | |
| GAACTAGATTCCCGATAGTC+GGG | - | chr8_4:32428830-32428849 | Msa1323780:intron | 45.0% | |
| AACTAGATTCCCGATAGTCG+GGG | - | chr8_4:32428831-32428850 | Msa1323780:intron | 45.0% | |
| AAGCATGATTCCCCGACTAT+CGG | + | chr8_4:32428844-32428863 | None:intergenic | 45.0% | |
| ! | GCAGCGTTATCGATTGCAAA+TGG | - | chr8_4:32429259-32429278 | Msa1323780:intron | 45.0% |
| ! | GCGTTATCGATTGCAAATGG+CGG | - | chr8_4:32429262-32429281 | Msa1323780:intron | 45.0% |
| ! | ATCGATTGCAAATGGCGGAA+TGG | - | chr8_4:32429267-32429286 | Msa1323780:intron | 45.0% |
| GCTGCAATGGCGTGTTTATA+GGG | - | chr8_4:32429358-32429377 | Msa1323780:intron | 45.0% | |
| CAATGGCGTGTTTATAGGGA+AGG | - | chr8_4:32429362-32429381 | Msa1323780:intron | 45.0% | |
| ! | GGATGGTGAAATATGGTGGA+AGG | + | chr8_4:32429395-32429414 | None:intergenic | 45.0% |
| !! | TGATGGCGGATGGTGAAATA+TGG | + | chr8_4:32429402-32429421 | None:intergenic | 45.0% |
| ! | TGATGCAGTGTTGTTGATGG+CGG | + | chr8_4:32429416-32429435 | None:intergenic | 45.0% |
| AAGGGTCTACAAGGAGCTTT+GGG | + | chr8_4:32429617-32429636 | None:intergenic | 45.0% | |
| ! | AGAAGTGAGAAAGGAAGTGC+GGG | + | chr8_4:32429654-32429673 | None:intergenic | 45.0% |
| GAGAAGTGAGAAAGGAAGTG+CGG | + | chr8_4:32429655-32429674 | None:intergenic | 45.0% | |
| ! | CTGACGTTTTATGGCAGATG+TGG | + | chr8_4:32429781-32429800 | None:intergenic | 45.0% |
| CACATCTGCCATAAAACGTC+AGG | - | chr8_4:32429779-32429798 | Msa1323780:intron | 45.0% | |
| CACCACCATCCGTTACAAAT+TGG | - | chr8_4:32429803-32429822 | Msa1323780:intron | 45.0% | |
| ! | CATGGCCAATTTGTAACGGA+TGG | + | chr8_4:32429811-32429830 | None:intergenic | 45.0% |
| CATCCGTTACAAATTGGCCA+TGG | - | chr8_4:32429809-32429828 | Msa1323780:intron | 45.0% | |
| CTGCCATGGCCAATTTGTAA+CGG | + | chr8_4:32429815-32429834 | None:intergenic | 45.0% | |
| TTCCAACAGATTGCCTGTCA+CGG | - | chr8_4:32430054-32430073 | Msa1323780:intron | 45.0% | |
| TGTAGAAGGCTAGAAGCTGT+CGG | + | chr8_4:32430093-32430112 | None:intergenic | 45.0% | |
| CTACAGATCTGAAGATGTGG+AGG | + | chr8_4:32430350-32430369 | None:intergenic | 45.0% | |
| CTTCAGATCTGTAGATTCGC+TGG | - | chr8_4:32430356-32430375 | Msa1323780:intron | 45.0% | |
| GATTCCTGAAACCGTTGCAT+GGG | - | chr8_4:32430410-32430429 | Msa1323780:intron | 45.0% | |
| CCCTTTGACCTTTACTGTTC+AGG | - | chr8_4:32430461-32430480 | Msa1323780:intron | 45.0% | |
| ! | AATTTTGTAGAGGGACCCTG+AGG | + | chr8_4:32430584-32430603 | None:intergenic | 45.0% |
| TCGCACCTGCAATTGATACA+TGG | - | chr8_4:32430916-32430935 | Msa1323780:intron | 45.0% | |
| TCCTTTAGTGCTGCAGACTA+AGG | + | chr8_4:32431256-32431275 | None:intergenic | 45.0% | |
| ATTGAGGATCTTGAATGGCC+TGG | - | chr8_4:32431280-32431299 | Msa1323780:intron | 45.0% | |
| GTTATCTGGATGCTTGATCC+AGG | + | chr8_4:32431301-32431320 | None:intergenic | 45.0% | |
| ! | GATCTGGCTCCATAGTTATC+TGG | + | chr8_4:32431315-32431334 | None:intergenic | 45.0% |
| GCTCTCAATGTAACAGAAGG+AGG | + | chr8_4:32431337-32431356 | None:intergenic | 45.0% | |
| ACATTGAGAGCTGAAGGACA+TGG | - | chr8_4:32431346-32431365 | Msa1323780:intron | 45.0% | |
| CATTGAGAGCTGAAGGACAT+GGG | - | chr8_4:32431347-32431366 | Msa1323780:intron | 45.0% | |
| ATTGAGAGCTGAAGGACATG+GGG | - | chr8_4:32431348-32431367 | Msa1323780:intron | 45.0% | |
| CGAAAGCAATACAAACCTGC+AGG | + | chr8_4:32431375-32431394 | None:intergenic | 45.0% | |
| TTGTGCGAATTCCGAACTCT+TGG | - | chr8_4:32431491-32431510 | Msa1323780:intron | 45.0% | |
| AGCATTTCAGTGTGATCACC+GGG | - | chr8_4:32431515-32431534 | Msa1323780:intron | 45.0% | |
| ATGACAGATAAGTCGATGGC+TGG | + | chr8_4:32431604-32431623 | None:intergenic | 45.0% | |
| !! | AGCAAGTTAAGCATTGGGAG+AGG | - | chr8_4:32431717-32431736 | Msa1323780:intron | 45.0% |
| !! | AAGTTAAGCATTGGGAGAGG+TGG | - | chr8_4:32431720-32431739 | Msa1323780:intron | 45.0% |
| ATAAGCGTGAGAGGTAGGTT+TGG | + | chr8_4:32431778-32431797 | None:intergenic | 45.0% | |
| AGAATCGACATAAGCGTGAG+AGG | + | chr8_4:32431787-32431806 | None:intergenic | 45.0% | |
| ! | AGTGTCATTGCACGGGAAAT+AGG | - | chr8_4:32432095-32432114 | Msa1323780:CDS | 45.0% |
| CATCCCGACCATGTCAGAAA+TGG | - | chr8_4:32427705-32427724 | Msa1323780:three_prime_UTR | 50.0% | |
| CGTCCATTTCTGACATGGTC+GGG | + | chr8_4:32427711-32427730 | None:intergenic | 50.0% | |
| ACCAGACGTTCTATGCGAAC+TGG | - | chr8_4:32427738-32427757 | Msa1323780:three_prime_UTR | 50.0% | |
| TCCAGTTCGCATAGAACGTC+TGG | + | chr8_4:32427742-32427761 | None:intergenic | 50.0% | |
| AGAGTTCTATGACGGCGTCT+TGG | + | chr8_4:32427816-32427835 | None:intergenic | 50.0% | |
| ! | TTGAACGCGTTTTCGGTTCC+TGG | - | chr8_4:32428066-32428085 | Msa1323780:exon | 50.0% |
| AGAAGCTGCATATCAGGACC+AGG | + | chr8_4:32428120-32428139 | None:intergenic | 50.0% | |
| AGAATCACGCTTTGTCACCG+TGG | - | chr8_4:32428252-32428271 | Msa1323780:CDS | 50.0% | |
| CTGATCCACCGTTAGTTGCT+TGG | - | chr8_4:32428691-32428710 | Msa1323780:intron | 50.0% | |
| GGTAACCAAGCAACTAACGG+TGG | + | chr8_4:32428699-32428718 | None:intergenic | 50.0% | |
| AGCATGATTCCCCGACTATC+GGG | + | chr8_4:32428843-32428862 | None:intergenic | 50.0% | |
| ATCCATCATGGCTGCACGAT+AGG | - | chr8_4:32429336-32429355 | Msa1323780:intron | 50.0% | |
| GGCTGCAATGGCGTGTTTAT+AGG | - | chr8_4:32429357-32429376 | Msa1323780:intron | 50.0% | |
| ! | TGGCGGATGGTGAAATATGG+TGG | + | chr8_4:32429399-32429418 | None:intergenic | 50.0% |
| GAAGGGTCTACAAGGAGCTT+TGG | + | chr8_4:32429618-32429637 | None:intergenic | 50.0% | |
| !! | GGCCAATTTGTAACGGATGG+TGG | + | chr8_4:32429808-32429827 | None:intergenic | 50.0% |
| !! | ATATTGGCCATGGCGGATTG+TGG | + | chr8_4:32429856-32429875 | None:intergenic | 50.0% |
| AACCGTGACAGGCAATCTGT+TGG | + | chr8_4:32430059-32430078 | None:intergenic | 50.0% | |
| GGATTCCTGAAACCGTTGCA+TGG | - | chr8_4:32430409-32430428 | Msa1323780:intron | 50.0% | |
| TAGTCCCATGCAACGGTTTC+AGG | + | chr8_4:32430417-32430436 | None:intergenic | 50.0% | |
| GCCTTAGTCTGCAGCACTAA+AGG | - | chr8_4:32431252-32431271 | Msa1323780:intron | 50.0% | |
| TCGACATAAGCGTGAGAGGT+AGG | + | chr8_4:32431783-32431802 | None:intergenic | 50.0% | |
| !! | CACGCTTATGTCGATTCTGC+CGG | - | chr8_4:32431789-32431808 | Msa1323780:intron | 50.0% |
| ! | TGGCAAACACAAGAGGCGTA+TGG | + | chr8_4:32432067-32432086 | None:intergenic | 50.0% |
| !! | TTGGTGGCGCTTCCATCGAA+CGG | + | chr8_4:32427797-32427816 | None:intergenic | 55.0% |
| GTTCTATGACGGCGTCTTGG+TGG | + | chr8_4:32427813-32427832 | None:intergenic | 55.0% | |
| ! | GCAGAAGGACGACCTCGTTT+TGG | - | chr8_4:32428015-32428034 | Msa1323780:three_prime_UTR | 55.0% |
| AGCCTATCGTGCAGCCATGA+TGG | + | chr8_4:32429341-32429360 | None:intergenic | 55.0% | |
| !! | GCAGTGTTGTTGATGGCGGA+TGG | + | chr8_4:32429412-32429431 | None:intergenic | 55.0% |
| ! | GGTGGTGCCCTGACGTTTTA+TGG | + | chr8_4:32429790-32429809 | None:intergenic | 55.0% |
| !! | GTCAAAGGGTTAGTCCCAGC+AGG | + | chr8_4:32430450-32430469 | None:intergenic | 55.0% |
| TTTGTAGAGGGACCCTGAGG+TGG | + | chr8_4:32430581-32430600 | None:intergenic | 55.0% | |
| GCTGCAGACTAAGGCCAGTT+TGG | + | chr8_4:32431247-32431266 | None:intergenic | 55.0% | |
| TCGACCAGGTTGCTGATAGC+CGG | + | chr8_4:32431811-32431830 | None:intergenic | 55.0% | |
| ACGCTCTAACCGCCGTTCGA+TGG | - | chr8_4:32427782-32427801 | Msa1323780:three_prime_UTR | 60.0% | |
| GGCTGCACGATAGGCTGCAA+TGG | - | chr8_4:32429345-32429364 | Msa1323780:intron | 60.0% | |
| TCTCCCACCACAATCCGCCA+TGG | - | chr8_4:32429846-32429865 | Msa1323780:intron | 60.0% | |
| !! | TGGCCATGGCGGATTGTGGT+GGG | + | chr8_4:32429852-32429871 | None:intergenic | 60.0% |
| !! | TTGGCCATGGCGGATTGTGG+TGG | + | chr8_4:32429853-32429872 | None:intergenic | 60.0% |
| TGAAGGACATGGGGACCTGC+AGG | - | chr8_4:32431357-32431376 | Msa1323780:intron | 60.0% | |
| ! | TCTGCCGGCTATCAGCAACC+TGG | - | chr8_4:32431804-32431823 | Msa1323780:intron | 60.0% |
| GTGGCGCTTCCATCGAACGG+CGG | + | chr8_4:32427794-32427813 | None:intergenic | 65.0% | |
| TAGAGGGACCCTGAGGTGGC+GGG | + | chr8_4:32430577-32430596 | None:intergenic | 65.0% | |
| GTAGAGGGACCCTGAGGTGG+CGG | + | chr8_4:32430578-32430597 | None:intergenic | 65.0% | |
| TGCCAATCCCCCGCCACCTC+AGG | - | chr8_4:32430565-32430584 | Msa1323780:intron | 70.0% | |
| GCCAATCCCCCGCCACCTCA+GGG | - | chr8_4:32430566-32430585 | Msa1323780:intron | 70.0% | |
| !! | ACCCTGAGGTGGCGGGGGAT+TGG | + | chr8_4:32430570-32430589 | None:intergenic | 70.0% |
| AGAGGGACCCTGAGGTGGCG+GGG | + | chr8_4:32430576-32430595 | None:intergenic | 70.0% | |
| ! | GAGGGACCCTGAGGTGGCGG+GGG | + | chr8_4:32430575-32430594 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 32427636 | 32432324 | 32427636 | ID=Msa1323780;Name=Msa1323780 |
| chr8_4 | mRNA | 32427636 | 32432324 | 32427636 | ID=Msa1323780-mRNA-1;Parent=Msa1323780;Name=Msa1323780-mRNA-1;_AED=0.21;_eAED=0.21;_QI=79|1|1|1|1|1|6|446|296 |
| chr8_4 | exon | 32427636 | 32428313 | 32427636 | ID=Msa1323780-mRNA-1:exon:10572;Parent=Msa1323780-mRNA-1 |
| chr8_4 | exon | 32428413 | 32428483 | 32428413 | ID=Msa1323780-mRNA-1:exon:10571;Parent=Msa1323780-mRNA-1 |
| chr8_4 | exon | 32428582 | 32428701 | 32428582 | ID=Msa1323780-mRNA-1:exon:10570;Parent=Msa1323780-mRNA-1 |
| chr8_4 | exon | 32429478 | 32429598 | 32429478 | ID=Msa1323780-mRNA-1:exon:10569;Parent=Msa1323780-mRNA-1 |
| chr8_4 | exon | 32431815 | 32431969 | 32431815 | ID=Msa1323780-mRNA-1:exon:10568;Parent=Msa1323780-mRNA-1 |
| chr8_4 | exon | 32432054 | 32432324 | 32432054 | ID=Msa1323780-mRNA-1:exon:10567;Parent=Msa1323780-mRNA-1 |
| chr8_4 | five_prime_UTR | 32432246 | 32432324 | 32432246 | ID=Msa1323780-mRNA-1:five_prime_utr;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32432054 | 32432245 | 32432054 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32431815 | 32431969 | 32431815 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32429478 | 32429598 | 32429478 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32428582 | 32428701 | 32428582 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32428413 | 32428483 | 32428413 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | CDS | 32428082 | 32428313 | 32428082 | ID=Msa1323780-mRNA-1:cds;Parent=Msa1323780-mRNA-1 |
| chr8_4 | three_prime_UTR | 32427636 | 32428081 | 32427636 | ID=Msa1323780-mRNA-1:three_prime_utr;Parent=Msa1323780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
