AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1324720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1324720 MtrunA17_Chr8g0357781 75.200 125 29 2 25 147 29 153 2.97e-63 191
Msa1324720 MtrunA17_Chr8g0358141 83.810 105 16 1 43 147 296 399 1.11e-59 189
Msa1324720 MtrunA17_Chr8g0357981 84.762 105 15 1 43 147 523 626 5.01e-59 192
Msa1324720 MtrunA17_Chr8g0357961 83.810 105 17 0 43 147 702 806 5.49e-59 195
Msa1324720 MtrunA17_Chr8g0357991 83.810 105 17 0 43 147 703 807 7.28e-59 194
Msa1324720 MtrunA17_Chr8g0358081 70.769 130 35 3 20 147 654 782 1.50e-58 193
Msa1324720 MtrunA17_Chr8g0357881 75.200 125 29 2 25 147 674 798 6.65e-58 192
Msa1324720 MtrunA17_Chr8g0358071 82.857 105 17 1 43 147 694 797 1.84e-57 191
Msa1324720 MtrunA17_Chr8g0358101 80.952 105 19 1 43 147 682 785 2.58e-56 187
Msa1324720 MtrunA17_Chr8g0357921 75.229 109 25 2 25 131 29 137 3.26e-55 170
Msa1324720 MtrunA17_Chr8g0358061 72.581 124 31 2 27 147 255 378 9.90e-52 168
Msa1324720 MtrunA17_Chr8g0358121 84.762 105 16 0 43 147 680 784 1.29e-50 172
Msa1324720 MtrunA17_Chr8g0358031 81.905 105 19 0 43 147 697 801 5.00e-47 162
Msa1324720 MtrunA17_Chr8g0358161 59.048 105 12 1 43 147 264 337 5.34e-32 116
Msa1324720 MtrunA17_Chr8g0357661 53.086 81 38 0 43 123 81 161 8.46e-28 101
Msa1324720 MtrunA17_Chr8g0357711 56.790 81 35 0 43 123 695 775 3.49e-27 105
Msa1324720 MtrunA17_Chr8g0357761 54.321 81 37 0 43 123 698 778 7.70e-27 104
Msa1324720 MtrunA17_Chr8g0357691 58.571 70 29 0 44 113 697 766 7.21e-26 102
Msa1324720 MtrunA17_Chr8g0357631 53.086 81 38 0 43 123 686 766 1.49e-25 101
Msa1324720 MtrunA17_Chr8g0357651 48.889 90 46 0 43 132 688 777 2.11e-24 97.8
Msa1324720 MtrunA17_Chr8g0357941 70.690 58 15 1 90 147 1 56 5.26e-21 80.5
Msa1324720 MtrunA17_Chr2g0280681 39.091 110 57 3 43 147 719 823 2.87e-20 86.3
Msa1324720 MtrunA17_Chr3g0081001 35.897 117 73 1 25 139 541 657 6.44e-20 85.1
Msa1324720 MtrunA17_Chr8g0357831 57.377 61 26 0 43 103 410 470 2.41e-19 83.2
Msa1324720 MtrunA17_Chr3g0081011 35.897 117 73 1 25 139 537 653 1.02e-18 81.6
Msa1324720 MtrunA17_Chr3g0078531 38.384 99 55 2 43 141 745 837 1.54e-18 81.3
Msa1324720 MtrunA17_Chr3g0078541 38.384 99 55 2 43 141 748 840 3.24e-18 80.1
Msa1324720 MtrunA17_Chr4g0042351 42.308 78 45 0 43 120 671 748 5.10e-18 79.7
Msa1324720 MtrunA17_Chr4g0048631 36.283 113 69 2 36 147 742 852 9.13e-18 79.0
Msa1324720 MtrunA17_Chr8g0361441 39.394 99 57 2 20 116 699 796 2.19e-17 77.8
Msa1324720 MtrunA17_Chr3g0078521 37.374 99 56 2 43 141 737 829 2.79e-17 77.4
Msa1324720 MtrunA17_Chr3g0081071 38.384 99 59 1 43 139 147 245 3.21e-17 75.5
Msa1324720 MtrunA17_Chr4g0042381 38.889 90 53 1 25 112 651 740 4.62e-17 77.0
Msa1324720 MtrunA17_Chr8g0354281 39.796 98 57 2 36 133 546 641 6.14e-17 76.6
Msa1324720 MtrunA17_Chr3g0082941 42.105 76 44 0 43 118 391 466 6.41e-17 76.3
Msa1324720 MtrunA17_Chr4g0042391 35.354 99 62 1 25 121 651 749 8.74e-17 76.3
Msa1324720 MtrunA17_Chr1g0206361 36.522 115 62 5 32 141 549 657 1.01e-16 75.9
Msa1324720 MtrunA17_Chr2g0280701 35.354 99 59 2 43 141 718 811 1.28e-16 75.5
Msa1324720 MtrunA17_Chr8g0354391 36.364 99 62 1 41 139 150 247 1.41e-16 73.9
Msa1324720 MtrunA17_Chr6g0453561 35.354 99 63 1 43 141 85 182 2.03e-16 72.4
Msa1324720 MtrunA17_Chr4g0048801 38.776 98 57 2 44 141 737 831 3.69e-16 74.3
Msa1324720 MtrunA17_Chr1g0206331 34.694 98 61 2 20 114 527 624 3.71e-16 74.3
Msa1324720 MtrunA17_Chr5g0428111 43.038 79 44 1 43 121 721 798 3.93e-16 74.3
Msa1324720 MtrunA17_Chr2g0280711 38.000 100 61 1 43 141 748 847 5.99e-16 73.6
Msa1324720 MtrunA17_Chr2g0280761 29.286 140 91 5 7 140 7 144 8.14e-16 69.7
Msa1324720 MtrunA17_Chr4g0048781 33.962 106 65 3 14 115 173 277 8.39e-16 72.4
Msa1324720 MtrunA17_Chr2g0280691 33.000 100 66 1 26 124 725 824 8.46e-16 73.2
Msa1324720 MtrunA17_Chr1g0206351 34.444 90 59 0 43 132 571 660 1.09e-15 72.8
Msa1324720 MtrunA17_Chr1g0205771 41.096 73 43 0 43 115 561 633 1.57e-15 72.4
Msa1324720 MtrunA17_Chr8g0354431 42.857 77 44 0 41 117 558 634 1.90e-15 72.4
Msa1324720 MtrunA17_Chr8g0354421 42.857 77 44 0 41 117 579 655 2.02e-15 72.0
Msa1324720 MtrunA17_Chr3g0078551 37.805 82 50 1 43 124 742 822 2.59e-15 72.0
Msa1324720 MtrunA17_Chr4g0042361 34.694 98 62 2 43 140 757 852 2.68e-15 72.0
Msa1324720 MtrunA17_Chr8g0354351 37.374 99 61 1 35 133 543 640 2.71e-15 71.6
Msa1324720 MtrunA17_Chr3g0081031 40.909 88 50 1 43 128 570 657 4.20e-15 71.2
Msa1324720 MtrunA17_Chr8g0354331 34.694 98 63 1 35 132 310 406 4.72e-15 70.9
Msa1324720 MtrunA17_Chr3g0081101 42.105 76 40 2 43 116 56 129 4.75e-15 68.2
Msa1324720 MtrunA17_Chr1g0206561 34.259 108 52 5 43 133 548 653 5.38e-15 70.9
Msa1324720 MtrunA17_Chr5g0428101 41.463 82 47 1 43 124 719 799 5.43e-15 70.9
Msa1324720 MtrunA17_Chr8g0361161 34.545 110 63 2 26 126 243 352 8.35e-15 70.1
Msa1324720 MtrunA17_Chr8g0354441 41.558 77 45 0 41 117 566 642 8.41e-15 70.5
Msa1324720 MtrunA17_Chr5g0394001 39.394 99 55 1 43 141 548 641 1.11e-14 70.1
Msa1324720 MtrunA17_Chr4g0023111 35.556 90 56 1 26 113 913 1002 1.18e-14 70.1
Msa1324720 MtrunA17_Chr8g0361281 43.662 71 38 2 43 112 731 800 1.41e-14 69.7
Msa1324720 MtrunA17_Chr4g0042341 31.959 97 64 2 43 139 741 835 1.86e-14 69.3
Msa1324720 MtrunA17_Chr1g0206321 32.727 110 69 2 8 112 10 119 2.35e-14 66.2
Msa1324720 MtrunA17_Chr4g0042441 33.898 118 75 2 25 139 698 815 2.57e-14 68.9
Msa1324720 MtrunA17_Chr5g0394011 43.056 72 39 1 43 112 569 640 4.09e-14 68.6
Msa1324720 MtrunA17_Chr8g0347571 31.959 97 61 1 44 140 789 880 4.46e-14 68.2
Msa1324720 MtrunA17_Chr4g0048661 41.429 70 40 1 43 112 255 323 4.59e-14 67.8
Msa1324720 MtrunA17_Chr7g0236201 33.654 104 67 2 44 147 688 789 4.75e-14 68.2
Msa1324720 MtrunA17_Chr1g0154371 45.833 72 36 3 44 114 575 644 4.88e-14 68.2
Msa1324720 MtrunA17_Chr2g0299041 43.662 71 39 1 43 112 330 400 5.33e-14 67.8
Msa1324720 MtrunA17_Chr7g0236571 36.250 80 51 0 44 123 554 633 5.94e-14 67.8
Msa1324720 MtrunA17_Chr4g0048581 30.392 102 62 1 43 144 748 840 6.39e-14 67.8
Msa1324720 MtrunA17_Chr2g0318811 38.835 103 58 4 39 138 712 812 8.02e-14 67.4
Msa1324720 MtrunA17_Chr3g0093161 30.275 109 74 2 32 139 703 810 1.14e-13 67.0
Msa1324720 MtrunA17_Chr7g0236231 33.083 133 79 6 20 147 710 837 1.42e-13 67.0
Msa1324720 MtrunA17_Chr1g0206231 33.600 125 80 2 20 141 538 662 1.53e-13 66.6
Msa1324720 MtrunA17_Chr1g0206551 33.333 108 53 5 43 133 254 359 1.68e-13 66.2
Msa1324720 MtrunA17_Chr8g0357871 51.020 49 24 0 46 94 49 97 1.92e-13 62.8
Msa1324720 MtrunA17_Chr4g0055011 38.961 77 47 0 43 119 289 365 2.10e-13 66.2
Msa1324720 MtrunA17_Chr8g0361141 32.727 110 65 2 26 126 715 824 2.15e-13 66.2
Msa1324720 MtrunA17_Chr8g0354291 36.842 76 48 0 41 116 1 76 2.21e-13 62.4
Msa1324720 MtrunA17_Chr4g0048681 42.029 69 39 1 44 112 499 566 2.32e-13 66.2
Msa1324720 MtrunA17_Chr8g0361341 40.000 90 52 2 35 123 47 135 3.20e-13 63.2
Msa1324720 MtrunA17_Chr7g0236531 34.000 100 63 1 43 139 256 355 4.17e-13 65.1
Msa1324720 MtrunA17_Chr4g0048791 35.417 96 61 1 44 139 751 845 4.89e-13 65.5
Msa1324720 MtrunA17_Chr3g0092301 30.556 108 70 3 35 141 139 242 5.02e-13 64.3
Msa1324720 MtrunA17_Chr2g0323231 35.135 74 48 0 43 116 396 469 5.71e-13 65.1
Msa1324720 MtrunA17_Chr7g0236511 34.343 99 62 1 44 139 699 797 6.06e-13 65.1
Msa1324720 MtrunA17_Chr5g0426941 38.356 73 42 3 43 114 558 628 6.09e-13 65.1
Msa1324720 MtrunA17_Chr7g0236691 30.282 142 93 4 7 142 676 817 7.37e-13 64.7
Msa1324720 MtrunA17_Chr4g0048731 39.437 71 42 1 43 113 264 333 7.54e-13 64.3
Msa1324720 MtrunA17_Chr7g0236651 34.940 83 54 0 44 126 704 786 7.56e-13 64.7
Msa1324720 MtrunA17_Chr7g0236641 32.381 105 66 3 44 147 744 844 8.55e-13 64.7
Msa1324720 MtrunA17_Chr8g0361251 40.741 81 47 1 43 123 724 803 1.18e-12 64.3
Msa1324720 MtrunA17_Chr7g0236161 36.842 76 48 0 44 119 669 744 1.24e-12 64.3
Msa1324720 MtrunA17_Chr1g0154351 36.111 72 45 1 43 114 576 646 1.27e-12 63.9
Msa1324720 MtrunA17_Chr7g0236121 36.842 76 48 0 44 119 722 797 1.36e-12 63.9
Msa1324720 MtrunA17_Chr2g0280831 35.616 73 47 0 44 116 313 385 1.40e-12 63.9
Msa1324720 MtrunA17_Chr2g0318831 39.560 91 51 4 26 113 701 790 1.53e-12 63.9
Msa1324720 MtrunA17_Chr5g0394021 36.275 102 55 3 43 141 539 633 1.59e-12 63.9
Msa1324720 MtrunA17_Chr4g0065561 36.145 83 52 1 43 124 664 746 1.81e-12 63.5
Msa1324720 MtrunA17_Chr2g0280791 30.435 92 64 0 44 135 739 830 1.98e-12 63.5
Msa1324720 MtrunA17_Chr2g0280801 30.435 92 64 0 44 135 745 836 2.04e-12 63.5
Msa1324720 MtrunA17_Chr3g0119041 37.662 77 46 2 43 118 558 633 2.68e-12 63.2
Msa1324720 MtrunA17_Chr4g0048641 33.051 118 74 3 26 139 657 773 3.02e-12 63.2
Msa1324720 MtrunA17_Chr6g0475091 40.278 72 41 2 44 114 801 871 3.39e-12 62.8
Msa1324720 MtrunA17_Chr8g0354271 38.961 77 46 1 41 116 551 627 3.51e-12 62.8
Msa1324720 MtrunA17_Chr5g0422921 39.189 74 44 1 43 116 716 788 4.06e-12 62.8
Msa1324720 MtrunA17_Chr4g0048741 40.580 69 40 1 44 112 751 818 4.24e-12 62.8
Msa1324720 MtrunA17_Chr4g0042431 33.673 98 63 2 43 139 49 145 4.80e-12 60.1
Msa1324720 MtrunA17_Chr4g0042401 37.143 70 44 0 43 112 721 790 5.53e-12 62.4
Msa1324720 MtrunA17_Chr4g0065541 32.323 99 66 1 43 141 656 753 5.91e-12 62.4
Msa1324720 MtrunA17_Chr4g0071371 33.333 81 53 1 43 122 352 432 6.16e-12 62.0
Msa1324720 MtrunA17_Chr5g0393981 33.663 101 60 2 43 140 614 710 6.40e-12 62.0
Msa1324720 MtrunA17_Chr8g0340091 32.381 105 69 2 43 147 750 852 7.55e-12 62.0
Msa1324720 MtrunA17_Chr2g0280731 33.333 93 60 1 20 110 742 834 8.09e-12 62.0
Msa1324720 MtrunA17_Chr4g0065521 38.571 70 43 0 43 112 255 324 8.24e-12 61.6
Msa1324720 MtrunA17_Chr7g0236341 30.328 122 80 3 7 123 694 815 1.21e-11 61.2
Msa1324720 MtrunA17_Chr4g0048711 37.143 70 43 1 43 112 147 215 1.27e-11 60.8
Msa1324720 MtrunA17_Chr8g0360201 29.915 117 79 2 26 141 605 719 1.36e-11 61.2
Msa1324720 MtrunA17_Chr8g0357931 96.000 25 1 0 43 67 605 629 1.40e-11 61.2
Msa1324720 MtrunA17_Chr4g0023221 32.500 120 75 4 26 143 929 1044 1.56e-11 60.8
Msa1324720 MtrunA17_Chr2g0318841 41.026 78 42 4 39 113 713 789 1.75e-11 60.8
Msa1324720 MtrunA17_Chr2g0280781 30.208 96 63 1 43 138 728 819 1.95e-11 60.8
Msa1324720 MtrunA17_Chr7g0236551 32.323 99 64 1 44 139 707 805 2.04e-11 60.8
Msa1324720 MtrunA17_Chr3g0084411 35.294 102 57 2 43 144 717 809 2.05e-11 60.8
Msa1324720 MtrunA17_Chr6g0475111 34.667 75 49 0 44 118 806 880 2.42e-11 60.5
Msa1324720 MtrunA17_Chr1g0206461 33.028 109 62 4 35 133 542 649 2.43e-11 60.5
Msa1324720 MtrunA17_Chr8g0340051 37.143 70 44 0 43 112 247 316 2.76e-11 60.1
Msa1324720 MtrunA17_Chr1g0206221 32.990 97 62 2 20 113 17 113 2.92e-11 57.8
Msa1324720 MtrunA17_Chr5g0428511 36.986 73 44 2 43 114 2 73 3.70e-11 56.6
Msa1324720 MtrunA17_Chr7g0236471 28.169 142 96 4 7 142 516 657 4.01e-11 59.7
Msa1324720 MtrunA17_Chr5g0428581 34.722 72 46 1 43 114 262 332 4.17e-11 59.7
Msa1324720 MtrunA17_Chr2g0280751 34.444 90 55 2 20 107 718 805 4.19e-11 59.7
Msa1324720 MtrunA17_Chr6g0474901 37.647 85 46 3 44 127 786 864 4.25e-11 59.7
Msa1324720 MtrunA17_Chr1g0154311 30.928 97 64 2 26 120 550 645 4.47e-11 59.7
Msa1324720 MtrunA17_Chr8g0361431 35.714 70 44 1 43 112 702 770 4.50e-11 59.7
Msa1324720 MtrunA17_Chr6g0474961 35.135 74 48 0 41 114 132 205 6.75e-11 58.2
Msa1324720 MtrunA17_Chr8g0361301 37.838 74 45 1 43 116 724 796 6.88e-11 59.3
Msa1324720 MtrunA17_Chr6g0474871 37.500 72 43 2 44 114 785 855 7.36e-11 58.9
Msa1324720 MtrunA17_Chr8g0361261 40.541 74 43 1 43 116 755 827 9.96e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1324720 AT1G11330.1 41.584 101 57 1 26 124 720 820 4.24e-21 89.0
Msa1324720 AT1G11330.2 41.584 101 57 1 26 124 722 822 4.28e-21 89.0
Msa1324720 AT1G11300.2 36.458 96 61 0 44 139 705 800 1.83e-19 84.3
Msa1324720 AT1G11300.1 36.458 96 61 0 44 139 720 815 1.84e-19 84.3
Msa1324720 AT4G23280.2 36.364 99 62 1 44 141 561 659 7.37e-18 79.7
Msa1324720 AT3G45860.1 45.714 70 38 0 44 113 571 640 7.47e-18 79.3
Msa1324720 AT4G23280.1 36.364 99 62 1 44 141 563 661 8.70e-18 79.3
Msa1324720 AT1G11350.1 41.463 82 48 0 43 124 729 810 9.13e-18 79.3
Msa1324720 AT4G23280.3 36.364 99 62 1 44 141 513 611 9.37e-18 79.3
Msa1324720 AT4G23240.1 42.029 69 40 0 44 112 554 622 9.73e-17 76.3
Msa1324720 AT4G23220.1 34.000 100 63 1 43 139 554 653 1.75e-16 75.5
Msa1324720 AT4G23240.2 41.429 70 41 0 43 112 246 315 1.82e-16 75.1
Msa1324720 AT4G11460.3 34.286 105 66 2 44 148 565 666 3.94e-16 74.7
Msa1324720 AT4G11460.1 34.286 105 66 2 44 148 568 669 3.94e-16 74.7
Msa1324720 AT4G23270.2 42.254 71 41 0 44 114 545 615 7.09e-16 73.9
Msa1324720 AT4G23270.1 42.254 71 41 0 44 114 545 615 7.09e-16 73.9
Msa1324720 AT4G23270.3 42.254 71 41 0 44 114 545 615 7.30e-16 73.9
Msa1324720 AT4G23310.1 38.571 70 43 0 44 113 727 796 7.48e-16 73.9
Msa1324720 AT4G23310.2 38.571 70 43 0 44 113 687 756 9.46e-16 73.6
Msa1324720 AT1G65790.1 32.787 122 76 3 26 141 717 838 1.16e-15 73.2
Msa1324720 AT4G11460.2 33.019 106 68 2 43 148 489 591 1.44e-15 72.8
Msa1324720 AT4G11470.1 41.429 70 41 0 44 113 558 627 1.98e-15 72.4
Msa1324720 AT4G11470.2 41.429 70 41 0 44 113 563 632 2.10e-15 72.4
Msa1324720 AT4G23290.1 41.429 70 41 0 44 113 539 608 5.60e-15 71.2
Msa1324720 AT4G23290.2 41.429 70 41 0 44 113 582 651 6.05e-15 71.2
Msa1324720 AT4G23180.1 36.735 98 57 2 43 140 565 657 7.44e-15 70.9
Msa1324720 AT1G11303.1 35.366 82 53 0 43 124 719 800 7.51e-15 70.9
Msa1324720 AT4G00970.1 42.254 71 40 1 44 113 564 634 1.55e-14 70.1
Msa1324720 AT4G11530.1 38.462 78 48 0 43 120 570 647 2.37e-14 69.3
Msa1324720 AT4G23200.1 34.409 93 58 1 25 114 533 625 2.55e-14 69.3
Msa1324720 AT1G61480.1 39.773 88 48 3 43 126 713 799 2.65e-14 69.3
Msa1324720 AT4G23130.1 40.000 70 42 0 44 113 559 628 3.22e-14 68.9
Msa1324720 AT4G23130.2 40.000 70 42 0 44 113 563 632 3.29e-14 68.9
Msa1324720 AT4G23160.1 35.537 121 74 3 20 137 550 669 4.12e-14 68.9
Msa1324720 AT1G61430.9 41.667 72 41 1 43 114 706 776 5.21e-14 68.6
Msa1324720 AT1G61430.1 41.667 72 41 1 43 114 709 779 5.21e-14 68.6
Msa1324720 AT4G11480.3 41.429 70 41 0 44 113 543 612 5.36e-14 68.6
Msa1324720 AT4G11480.1 41.429 70 41 0 44 113 548 617 5.80e-14 68.2
Msa1324720 AT4G11480.4 41.429 70 41 0 44 113 540 609 5.96e-14 68.2
Msa1324720 AT4G23300.1 40.845 71 42 0 43 113 573 643 6.09e-14 68.2
Msa1324720 AT1G61430.11 41.667 72 41 1 43 114 683 753 7.56e-14 68.2
Msa1324720 AT1G61430.12 41.667 72 41 1 43 114 683 753 7.56e-14 68.2
Msa1324720 AT1G61430.13 41.667 72 41 1 43 114 683 753 7.56e-14 68.2
Msa1324720 AT1G61440.2 42.254 71 40 1 44 114 726 795 8.62e-14 67.8
Msa1324720 AT4G23260.2 42.857 70 40 0 44 113 547 616 1.49e-13 67.0
Msa1324720 AT4G23260.1 42.857 70 40 0 44 113 558 627 1.58e-13 67.0
Msa1324720 AT1G61390.1 43.056 72 40 1 43 114 735 805 1.59e-13 67.0
Msa1324720 AT1G65800.1 36.082 97 56 3 26 116 721 817 2.04e-13 67.0
Msa1324720 AT4G23140.2 36.735 98 59 2 20 114 548 645 2.14e-13 66.6
Msa1324720 AT4G23140.1 36.735 98 59 2 20 114 542 639 2.16e-13 66.6
Msa1324720 AT4G23320.3 41.429 70 41 0 43 112 422 491 2.82e-13 66.2
Msa1324720 AT4G23320.2 41.429 70 41 0 43 112 401 470 2.99e-13 66.2
Msa1324720 AT4G23320.1 41.429 70 41 0 43 112 401 470 2.99e-13 66.2
Msa1324720 AT1G61460.1 41.667 72 41 1 43 114 653 723 3.84e-13 65.9
Msa1324720 AT4G23150.1 34.906 106 63 2 43 148 553 652 4.03e-13 65.9
Msa1324720 AT4G00960.2 38.889 72 43 1 43 113 181 252 4.25e-13 65.1
Msa1324720 AT1G61390.2 43.056 72 40 1 43 114 567 637 4.71e-13 65.9
Msa1324720 AT4G00960.1 42.667 75 36 4 43 113 275 346 5.08e-13 65.5
Msa1324720 AT1G61440.3 41.667 72 41 1 43 114 700 770 5.12e-13 65.9
Msa1324720 AT4G00960.3 38.889 72 43 1 43 113 188 259 5.13e-13 65.1
Msa1324720 AT1G61440.1 41.667 72 41 1 43 114 695 765 5.21e-13 65.5
Msa1324720 AT4G23210.3 33.333 90 60 0 25 114 555 644 7.07e-13 65.1
Msa1324720 AT1G61420.5 41.892 74 42 1 43 116 563 635 1.11e-12 64.7
Msa1324720 AT1G61400.1 41.667 72 41 1 43 114 717 787 1.12e-12 64.7
Msa1324720 AT1G61420.3 41.892 74 42 1 43 116 561 633 1.15e-12 64.7
Msa1324720 AT1G61400.2 41.667 72 41 1 43 114 725 795 1.18e-12 64.7
Msa1324720 AT1G61490.3 40.278 72 42 1 43 114 557 627 1.27e-12 64.3
Msa1324720 AT1G61420.2 41.892 74 42 1 43 116 713 785 1.42e-12 64.3
Msa1324720 AT1G61420.4 41.892 74 42 1 43 116 713 785 1.42e-12 64.3
Msa1324720 AT1G61420.1 41.892 74 42 1 43 116 711 783 1.48e-12 64.3
Msa1324720 AT1G61490.4 40.278 72 42 1 43 114 707 777 1.54e-12 64.3
Msa1324720 AT1G61490.1 40.278 72 42 1 43 114 707 777 1.54e-12 64.3
Msa1324720 AT1G61490.2 40.278 72 42 1 43 114 707 777 1.54e-12 64.3
Msa1324720 AT1G61490.5 40.278 72 42 1 43 114 707 777 1.54e-12 64.3
Msa1324720 AT1G61490.6 40.278 72 42 1 43 114 681 751 1.56e-12 64.3
Msa1324720 AT1G61490.7 40.278 72 42 1 43 114 681 751 1.56e-12 64.3
Msa1324720 AT1G61550.1 38.272 81 49 1 34 114 697 776 1.86e-12 63.9
Msa1324720 AT1G61500.2 40.789 76 43 2 43 117 690 764 3.54e-12 63.2
Msa1324720 AT1G61500.1 40.789 76 43 2 43 117 708 782 3.62e-12 63.2
Msa1324720 AT1G61610.1 29.710 138 90 4 7 139 700 835 3.68e-12 63.2
Msa1324720 AT1G61500.3 40.789 76 43 2 43 117 713 787 3.70e-12 63.2
Msa1324720 AT4G23190.3 39.437 71 43 0 43 113 492 562 3.70e-12 63.2
Msa1324720 AT4G23190.4 39.437 71 43 0 43 113 492 562 3.70e-12 63.2
Msa1324720 AT4G23190.1 39.437 71 43 0 43 113 570 640 3.78e-12 63.2
Msa1324720 AT4G21380.1 37.209 86 50 2 35 116 734 819 6.26e-12 62.4
Msa1324720 AT4G23230.1 40.278 72 43 0 43 114 554 625 8.33e-12 62.0
Msa1324720 AT3G16030.2 38.889 72 42 2 44 113 623 694 9.28e-12 62.0
Msa1324720 AT3G16030.6 38.889 72 42 2 44 113 767 838 9.58e-12 62.0
Msa1324720 AT3G16030.1 38.889 72 42 2 44 113 746 817 1.17e-11 61.6
Msa1324720 AT4G21410.3 33.945 109 62 5 31 131 564 670 1.33e-11 61.6
Msa1324720 AT4G21400.7 40.230 87 48 4 27 112 557 640 1.34e-11 61.6
Msa1324720 AT4G03230.2 35.780 109 63 5 14 116 774 881 1.46e-11 61.6
Msa1324720 AT4G03230.6 35.780 109 63 5 14 116 774 881 1.46e-11 61.6
Msa1324720 AT4G21400.1 40.230 87 48 4 27 112 567 650 1.46e-11 61.6
Msa1324720 AT4G03230.5 35.780 109 63 5 14 116 802 909 1.46e-11 61.6
Msa1324720 AT4G03230.7 35.780 109 63 5 14 116 717 824 1.53e-11 61.6
Msa1324720 AT4G21400.2 40.230 87 48 4 27 112 555 638 1.54e-11 61.2
Msa1324720 AT4G03230.8 35.780 109 63 5 14 116 716 823 1.62e-11 61.2
Msa1324720 AT4G03230.4 35.780 109 63 5 14 116 874 981 1.65e-11 61.2
Msa1324720 AT4G03230.1 35.780 109 63 5 14 116 874 981 1.65e-11 61.2
Msa1324720 AT4G21410.1 33.945 109 62 5 31 131 439 545 1.70e-11 61.2
Msa1324720 AT4G03230.3 35.780 109 63 5 14 116 709 816 1.72e-11 61.2
Msa1324720 AT4G21400.8 40.230 87 48 4 27 112 456 539 2.07e-11 60.8
Msa1324720 AT4G05200.1 37.805 82 44 3 37 112 553 633 3.44e-11 60.5
Msa1324720 AT4G05200.2 37.805 82 44 3 37 112 571 651 3.55e-11 60.5
Msa1324720 AT1G11410.3 30.841 107 71 2 44 147 715 821 4.19e-11 60.1
Msa1324720 AT1G11410.2 30.841 107 71 2 44 147 624 730 4.25e-11 60.1
Msa1324720 AT1G11410.4 30.841 107 71 2 44 147 746 852 4.46e-11 60.1
Msa1324720 AT1G11410.1 30.841 107 71 2 44 147 739 845 4.86e-11 60.1
Msa1324720 AT1G61370.1 31.250 96 64 2 43 138 718 811 5.65e-11 59.7
Msa1324720 AT1G61380.1 40.845 71 41 1 44 114 706 775 6.39e-11 59.7
Msa1324720 AT4G21390.1 32.323 99 65 1 20 116 720 818 7.29e-11 59.3

Find 32 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGAATGCTGGTCTTCT+TGG 0.317174 8_4:-35091711 None:intergenic
ATGCACCTTTGCACTTCTTC+GGG 0.325972 8_4:-35091588 None:intergenic
AATGCACCTTTGCACTTCTT+CGG 0.333210 8_4:-35091589 None:intergenic
TCTACCTCATGTGAAGTAGA+AGG 0.352480 8_4:+35091807 Msa1324720:CDS
CGGTGAGTATCTACAGCTAA+TGG 0.415208 8_4:+35091539 Msa1324720:CDS
AGAAATTGCTGTTGTAGAAT+AGG 0.416328 8_4:-35091787 None:intergenic
GATGAAAGGTATCGAAATGA+TGG 0.474519 8_4:+35090239 Msa1324720:CDS
CCTAACAAGCGTGGGAGCTA+TGG 0.477609 8_4:+35091511 Msa1324720:intron
GATATAGCATCAGATATTGT+TGG 0.486192 8_4:-35091654 None:intergenic
GAATGCTGGTCTTCTTGGTA+AGG 0.494868 8_4:-35091706 None:intergenic
TCAAAGTTGTTTCTCCCTCA+AGG 0.513796 8_4:-35091746 None:intergenic
GTTACAAGAGAGATCCTTGA+GGG 0.530017 8_4:+35091732 Msa1324720:CDS
ATGATGGATCTGATGATTCA+TGG 0.530454 8_4:+35090255 Msa1324720:CDS
ACAAATGTATCATTTAATGA+TGG 0.536167 8_4:-35091564 None:intergenic
ACATGTGGTGGTCGGTCGCA+AGG 0.542557 8_4:+35090291 Msa1324720:CDS
CTACCTCATGTGAAGTAGAA+GGG 0.547478 8_4:+35091808 Msa1324720:CDS
GGATCTGATGATTCATGGTA+TGG 0.549099 8_4:+35090260 Msa1324720:CDS
TCTCTTGTAACATAGAATGC+TGG 0.565650 8_4:-35091720 None:intergenic
AGAAACAACTTTGAATATGT+CGG 0.571863 8_4:+35091755 Msa1324720:CDS
AGGGACGGCGGCGAGATGAA+AGG 0.591645 8_4:+35090225 Msa1324720:CDS
GTGCAAAGGTGCATTCATGT+TGG 0.623518 8_4:+35091597 Msa1324720:CDS
AGAGAGAGAGACGAACTTGG+AGG 0.623996 8_4:+35090327 Msa1324720:CDS
TTGTTCCCGAAGAAGTGCAA+AGG 0.627943 8_4:+35091583 Msa1324720:CDS
TTTCCCTTCTACTTCACATG+AGG 0.628033 8_4:-35091811 None:intergenic
GCGTGGGAGCTATGGAATGA+CGG 0.633980 8_4:+35091519 Msa1324720:intron
ATGGATCTCAAAATGAGGGA+CGG 0.634117 8_4:+35090210 None:intergenic
GGTATGGTGGCGAAGACATG+TGG 0.666525 8_4:+35090276 Msa1324720:CDS
TGGCGAAGACATGTGGTGGT+CGG 0.668689 8_4:+35090283 Msa1324720:CDS
TCTGATGATTCATGGTATGG+TGG 0.679367 8_4:+35090263 Msa1324720:CDS
GATCTCAAAATGAGGGACGG+CGG 0.704869 8_4:+35090213 None:intergenic
ATGGTGGCGAAGACATGTGG+TGG 0.713932 8_4:+35090279 Msa1324720:CDS
TGTTACAAGAGAGATCCTTG+AGG 0.721841 8_4:+35091731 Msa1324720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAATACTTTTTAAATC+TGG + chr8_4:35090479-35090498 Msa1324720:intron 10.0%
!!! GATTATTATTAACTAAATTT+TGG + chr8_4:35091259-35091278 Msa1324720:intron 10.0%
!!! ATTAAAATACTTTTTAAATC+TGG + chr8_4:35090479-35090498 Msa1324720:intron 10.0%
!!! GATTATTATTAACTAAATTT+TGG + chr8_4:35091259-35091278 Msa1324720:intron 10.0%
!! TACTATGAAAGAATTTAAAT+GGG - chr8_4:35090509-35090528 None:intergenic 15.0%
!! TTACTATGAAAGAATTTAAA+TGG - chr8_4:35090510-35090529 None:intergenic 15.0%
!! TATATAGTATGATATTTACT+TGG - chr8_4:35090840-35090859 None:intergenic 15.0%
!! TTAGTCATAAAAAACTAAAA+TGG + chr8_4:35090871-35090890 Msa1324720:intron 15.0%
!! GTTTAATTAAATTAGGAATA+AGG - chr8_4:35091490-35091509 None:intergenic 15.0%
!! TACTATGAAAGAATTTAAAT+GGG - chr8_4:35090509-35090528 None:intergenic 15.0%
!! TTACTATGAAAGAATTTAAA+TGG - chr8_4:35090510-35090529 None:intergenic 15.0%
!! TATATAGTATGATATTTACT+TGG - chr8_4:35090840-35090859 None:intergenic 15.0%
!! TTAGTCATAAAAAACTAAAA+TGG + chr8_4:35090871-35090890 Msa1324720:intron 15.0%
!! GTTTAATTAAATTAGGAATA+AGG - chr8_4:35091490-35091509 None:intergenic 15.0%
!! AATGAAACTAAAAAGAAACA+CGG - chr8_4:35090451-35090470 None:intergenic 20.0%
!! ACTATGAAAGAATTTAAATG+GGG - chr8_4:35090508-35090527 None:intergenic 20.0%
!!! TTAACTCAGACATTTTAAAT+GGG - chr8_4:35090576-35090595 None:intergenic 20.0%
!!! ATTAACTCAGACATTTTAAA+TGG - chr8_4:35090577-35090596 None:intergenic 20.0%
!! GTTAGGAGTTTAATTAAATT+AGG - chr8_4:35091497-35091516 None:intergenic 20.0%
!! ACAAATGTATCATTTAATGA+TGG - chr8_4:35091567-35091586 None:intergenic 20.0%
!! AATGAAACTAAAAAGAAACA+CGG - chr8_4:35090451-35090470 None:intergenic 20.0%
!! ACTATGAAAGAATTTAAATG+GGG - chr8_4:35090508-35090527 None:intergenic 20.0%
!!! TTAACTCAGACATTTTAAAT+GGG - chr8_4:35090576-35090595 None:intergenic 20.0%
!!! ATTAACTCAGACATTTTAAA+TGG - chr8_4:35090577-35090596 None:intergenic 20.0%
!! GTTAGGAGTTTAATTAAATT+AGG - chr8_4:35091497-35091516 None:intergenic 20.0%
!! ACAAATGTATCATTTAATGA+TGG - chr8_4:35091567-35091586 None:intergenic 20.0%
! TAAAAACAAGAAAAGTGGTA+AGG - chr8_4:35090536-35090555 None:intergenic 25.0%
! TGATCTAAAAACAAGAAAAG+TGG - chr8_4:35090541-35090560 None:intergenic 25.0%
!!! TTTCTTGTTTTTAGATCAAG+TGG + chr8_4:35090543-35090562 Msa1324720:intron 25.0%
!! TAACATTTTCCTTGATATTG+TGG + chr8_4:35090784-35090803 Msa1324720:intron 25.0%
!! AAAACTAAAATGGCGTATTT+TGG + chr8_4:35090881-35090900 Msa1324720:intron 25.0%
! CAAGAAAAAAGTTACTAGAT+TGG + chr8_4:35090968-35090987 Msa1324720:intron 25.0%
! ATAATACAAGGAATTGCTTA+AGG + chr8_4:35091006-35091025 Msa1324720:intron 25.0%
! AACCCAAAAATTTCTGATTT+CGG + chr8_4:35091114-35091133 Msa1324720:intron 25.0%
!! TACCGAAATCAGAAATTTTT+GGG - chr8_4:35091119-35091138 None:intergenic 25.0%
!! ATACCGAAATCAGAAATTTT+TGG - chr8_4:35091120-35091139 None:intergenic 25.0%
! AAAAATTTCTGATTTCGGTA+TGG + chr8_4:35091119-35091138 Msa1324720:intron 25.0%
! AGAAACAACTTTGAATATGT+CGG + chr8_4:35091755-35091774 Msa1324720:CDS 25.0%
! TAAAAACAAGAAAAGTGGTA+AGG - chr8_4:35090536-35090555 None:intergenic 25.0%
! TGATCTAAAAACAAGAAAAG+TGG - chr8_4:35090541-35090560 None:intergenic 25.0%
!!! TTTCTTGTTTTTAGATCAAG+TGG + chr8_4:35090543-35090562 Msa1324720:intron 25.0%
!! TAACATTTTCCTTGATATTG+TGG + chr8_4:35090784-35090803 Msa1324720:intron 25.0%
!! AAAACTAAAATGGCGTATTT+TGG + chr8_4:35090881-35090900 Msa1324720:intron 25.0%
! CAAGAAAAAAGTTACTAGAT+TGG + chr8_4:35090968-35090987 Msa1324720:intron 25.0%
! ATAATACAAGGAATTGCTTA+AGG + chr8_4:35091006-35091025 Msa1324720:intron 25.0%
! AACCCAAAAATTTCTGATTT+CGG + chr8_4:35091114-35091133 Msa1324720:intron 25.0%
!! TACCGAAATCAGAAATTTTT+GGG - chr8_4:35091119-35091138 None:intergenic 25.0%
!! ATACCGAAATCAGAAATTTT+TGG - chr8_4:35091120-35091139 None:intergenic 25.0%
! AAAAATTTCTGATTTCGGTA+TGG + chr8_4:35091119-35091138 Msa1324720:intron 25.0%
! AGAAACAACTTTGAATATGT+CGG + chr8_4:35091755-35091774 Msa1324720:CDS 25.0%
TCTATCTTAACTCAACTTTG+TGG - chr8_4:35090358-35090377 None:intergenic 30.0%
ATATATGCCAAACAAAAGCT+AGG + chr8_4:35090623-35090642 Msa1324720:intron 30.0%
!! TAGAAATCCTAGCTTTTGTT+TGG - chr8_4:35090633-35090652 None:intergenic 30.0%
AGCTAGGATTTCTATCTATT+TGG + chr8_4:35090639-35090658 Msa1324720:intron 30.0%
! ATTTGGTGAGATGATATTGA+AGG + chr8_4:35090656-35090675 Msa1324720:intron 30.0%
AAGGCTATATTTGTATGTGA+TGG + chr8_4:35090675-35090694 Msa1324720:intron 30.0%
AATCATTCATAGAGACATGA+AGG + chr8_4:35091062-35091081 Msa1324720:intron 30.0%
GCAATCATGGATAAAAAAGA+AGG - chr8_4:35091228-35091247 None:intergenic 30.0%
!! TTAACTAAATTTTGGTGCAG+TGG + chr8_4:35091267-35091286 Msa1324720:intron 30.0%
TGTTGAACATATTCCTTACA+TGG - chr8_4:35091313-35091332 None:intergenic 30.0%
AAGTCTGATGTTTATAGCTT+TGG + chr8_4:35091333-35091352 Msa1324720:intron 30.0%
TTGCTTCTTGAAATTCTTTG+CGG + chr8_4:35091360-35091379 Msa1324720:intron 30.0%
CATGTCCTATTATGTTTAGT+GGG - chr8_4:35091419-35091438 None:intergenic 30.0%
ACATGTCCTATTATGTTTAG+TGG - chr8_4:35091420-35091439 None:intergenic 30.0%
GATATAGCATCAGATATTGT+TGG - chr8_4:35091657-35091676 None:intergenic 30.0%
! AGAAATTGCTGTTGTAGAAT+AGG - chr8_4:35091790-35091809 None:intergenic 30.0%
TCTATCTTAACTCAACTTTG+TGG - chr8_4:35090358-35090377 None:intergenic 30.0%
ATATATGCCAAACAAAAGCT+AGG + chr8_4:35090623-35090642 Msa1324720:intron 30.0%
!! TAGAAATCCTAGCTTTTGTT+TGG - chr8_4:35090633-35090652 None:intergenic 30.0%
AGCTAGGATTTCTATCTATT+TGG + chr8_4:35090639-35090658 Msa1324720:intron 30.0%
! ATTTGGTGAGATGATATTGA+AGG + chr8_4:35090656-35090675 Msa1324720:intron 30.0%
AAGGCTATATTTGTATGTGA+TGG + chr8_4:35090675-35090694 Msa1324720:intron 30.0%
AATCATTCATAGAGACATGA+AGG + chr8_4:35091062-35091081 Msa1324720:intron 30.0%
GCAATCATGGATAAAAAAGA+AGG - chr8_4:35091228-35091247 None:intergenic 30.0%
!! TTAACTAAATTTTGGTGCAG+TGG + chr8_4:35091267-35091286 Msa1324720:intron 30.0%
TGTTGAACATATTCCTTACA+TGG - chr8_4:35091313-35091332 None:intergenic 30.0%
AAGTCTGATGTTTATAGCTT+TGG + chr8_4:35091333-35091352 Msa1324720:intron 30.0%
TTGCTTCTTGAAATTCTTTG+CGG + chr8_4:35091360-35091379 Msa1324720:intron 30.0%
CATGTCCTATTATGTTTAGT+GGG - chr8_4:35091419-35091438 None:intergenic 30.0%
ACATGTCCTATTATGTTTAG+TGG - chr8_4:35091420-35091439 None:intergenic 30.0%
GATATAGCATCAGATATTGT+TGG - chr8_4:35091657-35091676 None:intergenic 30.0%
! AGAAATTGCTGTTGTAGAAT+AGG - chr8_4:35091790-35091809 None:intergenic 30.0%
!! GATGAAAGGTATCGAAATGA+TGG + chr8_4:35090239-35090258 Msa1324720:CDS 35.0%
!! ATGATGGATCTGATGATTCA+TGG + chr8_4:35090255-35090274 Msa1324720:CDS 35.0%
GTTAAGATAGAGAAGACTCT+TGG + chr8_4:35090367-35090386 Msa1324720:intron 35.0%
!! AGACTCTTGGTTGATAACAA+AGG + chr8_4:35090380-35090399 Msa1324720:intron 35.0%
GAAACTAAAAAGAAACACGG+TGG - chr8_4:35090448-35090467 None:intergenic 35.0%
GTGAACTATCCACAATATCA+AGG - chr8_4:35090796-35090815 None:intergenic 35.0%
AAGCGCTTGAACATAATACA+AGG + chr8_4:35090994-35091013 Msa1324720:intron 35.0%
AATCAACAGTTAACACCAAC+AGG + chr8_4:35091163-35091182 Msa1324720:intron 35.0%
TTAACACCAACAGGATTGTT+GGG + chr8_4:35091172-35091191 Msa1324720:intron 35.0%
TCTCAAAGTTTGTGCAATCA+TGG - chr8_4:35091241-35091260 None:intergenic 35.0%
ATTCCTTACATGGCATATTC+TGG - chr8_4:35091303-35091322 None:intergenic 35.0%
AATTAAACTCCTAACAAGCG+TGG + chr8_4:35091502-35091521 Msa1324720:intron 35.0%
ATTAAACTCCTAACAAGCGT+GGG + chr8_4:35091503-35091522 Msa1324720:intron 35.0%
TCTCTTGTAACATAGAATGC+TGG - chr8_4:35091723-35091742 None:intergenic 35.0%
!! GATGAAAGGTATCGAAATGA+TGG + chr8_4:35090239-35090258 Msa1324720:CDS 35.0%
!! ATGATGGATCTGATGATTCA+TGG + chr8_4:35090255-35090274 Msa1324720:CDS 35.0%
GTTAAGATAGAGAAGACTCT+TGG + chr8_4:35090367-35090386 Msa1324720:intron 35.0%
!! AGACTCTTGGTTGATAACAA+AGG + chr8_4:35090380-35090399 Msa1324720:intron 35.0%
GAAACTAAAAAGAAACACGG+TGG - chr8_4:35090448-35090467 None:intergenic 35.0%
GTGAACTATCCACAATATCA+AGG - chr8_4:35090796-35090815 None:intergenic 35.0%
AAGCGCTTGAACATAATACA+AGG + chr8_4:35090994-35091013 Msa1324720:intron 35.0%
AATCAACAGTTAACACCAAC+AGG + chr8_4:35091163-35091182 Msa1324720:intron 35.0%
TTAACACCAACAGGATTGTT+GGG + chr8_4:35091172-35091191 Msa1324720:intron 35.0%
TCTCAAAGTTTGTGCAATCA+TGG - chr8_4:35091241-35091260 None:intergenic 35.0%
ATTCCTTACATGGCATATTC+TGG - chr8_4:35091303-35091322 None:intergenic 35.0%
AATTAAACTCCTAACAAGCG+TGG + chr8_4:35091502-35091521 Msa1324720:intron 35.0%
ATTAAACTCCTAACAAGCGT+GGG + chr8_4:35091503-35091522 Msa1324720:intron 35.0%
TCTCTTGTAACATAGAATGC+TGG - chr8_4:35091723-35091742 None:intergenic 35.0%
GGATCTGATGATTCATGGTA+TGG + chr8_4:35090260-35090279 Msa1324720:CDS 40.0%
TCTGATGATTCATGGTATGG+TGG + chr8_4:35090263-35090282 Msa1324720:CDS 40.0%
GTTAACACCAACAGGATTGT+TGG + chr8_4:35091171-35091190 Msa1324720:intron 40.0%
TCTCCAGAATATGCCATGTA+AGG + chr8_4:35091297-35091316 Msa1324720:intron 40.0%
GATCGCCCACTAAACATAAT+AGG + chr8_4:35091411-35091430 Msa1324720:intron 40.0%
AATGCACCTTTGCACTTCTT+CGG - chr8_4:35091592-35091611 None:intergenic 40.0%
!! ACATAGAATGCTGGTCTTCT+TGG - chr8_4:35091714-35091733 None:intergenic 40.0%
TGTTACAAGAGAGATCCTTG+AGG + chr8_4:35091731-35091750 Msa1324720:CDS 40.0%
GTTACAAGAGAGATCCTTGA+GGG + chr8_4:35091732-35091751 Msa1324720:CDS 40.0%
!! TCAAAGTTGTTTCTCCCTCA+AGG - chr8_4:35091749-35091768 None:intergenic 40.0%
TCTACCTCATGTGAAGTAGA+AGG + chr8_4:35091807-35091826 Msa1324720:CDS 40.0%
CTACCTCATGTGAAGTAGAA+GGG + chr8_4:35091808-35091827 Msa1324720:CDS 40.0%
TTTCCCTTCTACTTCACATG+AGG - chr8_4:35091814-35091833 None:intergenic 40.0%
GGATCTGATGATTCATGGTA+TGG + chr8_4:35090260-35090279 Msa1324720:CDS 40.0%
TCTGATGATTCATGGTATGG+TGG + chr8_4:35090263-35090282 Msa1324720:CDS 40.0%
GTTAACACCAACAGGATTGT+TGG + chr8_4:35091171-35091190 Msa1324720:intron 40.0%
TCTCCAGAATATGCCATGTA+AGG + chr8_4:35091297-35091316 Msa1324720:intron 40.0%
GATCGCCCACTAAACATAAT+AGG + chr8_4:35091411-35091430 Msa1324720:intron 40.0%
AATGCACCTTTGCACTTCTT+CGG - chr8_4:35091592-35091611 None:intergenic 40.0%
!! ACATAGAATGCTGGTCTTCT+TGG - chr8_4:35091714-35091733 None:intergenic 40.0%
TGTTACAAGAGAGATCCTTG+AGG + chr8_4:35091731-35091750 Msa1324720:CDS 40.0%
GTTACAAGAGAGATCCTTGA+GGG + chr8_4:35091732-35091751 Msa1324720:CDS 40.0%
!! TCAAAGTTGTTTCTCCCTCA+AGG - chr8_4:35091749-35091768 None:intergenic 40.0%
TCTACCTCATGTGAAGTAGA+AGG + chr8_4:35091807-35091826 Msa1324720:CDS 40.0%
CTACCTCATGTGAAGTAGAA+GGG + chr8_4:35091808-35091827 Msa1324720:CDS 40.0%
TTTCCCTTCTACTTCACATG+AGG - chr8_4:35091814-35091833 None:intergenic 40.0%
CTATGTCCCAACAATCCTGT+TGG - chr8_4:35091181-35091200 None:intergenic 45.0%
CGGTGAGTATCTACAGCTAA+TGG + chr8_4:35091539-35091558 Msa1324720:CDS 45.0%
! TTGTTCCCGAAGAAGTGCAA+AGG + chr8_4:35091583-35091602 Msa1324720:CDS 45.0%
ATGCACCTTTGCACTTCTTC+GGG - chr8_4:35091591-35091610 None:intergenic 45.0%
! GTGCAAAGGTGCATTCATGT+TGG + chr8_4:35091597-35091616 Msa1324720:CDS 45.0%
!! GAATGCTGGTCTTCTTGGTA+AGG - chr8_4:35091709-35091728 None:intergenic 45.0%
CTATGTCCCAACAATCCTGT+TGG - chr8_4:35091181-35091200 None:intergenic 45.0%
CGGTGAGTATCTACAGCTAA+TGG + chr8_4:35091539-35091558 Msa1324720:CDS 45.0%
! TTGTTCCCGAAGAAGTGCAA+AGG + chr8_4:35091583-35091602 Msa1324720:CDS 45.0%
ATGCACCTTTGCACTTCTTC+GGG - chr8_4:35091591-35091610 None:intergenic 45.0%
! GTGCAAAGGTGCATTCATGT+TGG + chr8_4:35091597-35091616 Msa1324720:CDS 45.0%
!! GAATGCTGGTCTTCTTGGTA+AGG - chr8_4:35091709-35091728 None:intergenic 45.0%
GAGAGAGAGAGAGACGAACT+TGG + chr8_4:35090324-35090343 Msa1324720:CDS 50.0%
AGAGAGAGAGACGAACTTGG+AGG + chr8_4:35090327-35090346 Msa1324720:CDS 50.0%
GAGAGACGAACTTGGAGGTA+AGG + chr8_4:35090332-35090351 Msa1324720:intron 50.0%
GAGAGAGAGAGAGACGAACT+TGG + chr8_4:35090324-35090343 Msa1324720:CDS 50.0%
AGAGAGAGAGACGAACTTGG+AGG + chr8_4:35090327-35090346 Msa1324720:CDS 50.0%
GAGAGACGAACTTGGAGGTA+AGG + chr8_4:35090332-35090351 Msa1324720:intron 50.0%
! GGTATGGTGGCGAAGACATG+TGG + chr8_4:35090276-35090295 Msa1324720:CDS 55.0%
! ATGGTGGCGAAGACATGTGG+TGG + chr8_4:35090279-35090298 Msa1324720:CDS 55.0%
TGGCGAAGACATGTGGTGGT+CGG + chr8_4:35090283-35090302 Msa1324720:CDS 55.0%
CCATAGCTCCCACGCTTGTT+AGG - chr8_4:35091514-35091533 None:intergenic 55.0%
CCTAACAAGCGTGGGAGCTA+TGG + chr8_4:35091511-35091530 Msa1324720:intron 55.0%
GCGTGGGAGCTATGGAATGA+CGG + chr8_4:35091519-35091538 Msa1324720:intron 55.0%
! GGTATGGTGGCGAAGACATG+TGG + chr8_4:35090276-35090295 Msa1324720:CDS 55.0%
! ATGGTGGCGAAGACATGTGG+TGG + chr8_4:35090279-35090298 Msa1324720:CDS 55.0%
TGGCGAAGACATGTGGTGGT+CGG + chr8_4:35090283-35090302 Msa1324720:CDS 55.0%
CCATAGCTCCCACGCTTGTT+AGG - chr8_4:35091514-35091533 None:intergenic 55.0%
CCTAACAAGCGTGGGAGCTA+TGG + chr8_4:35091511-35091530 Msa1324720:intron 55.0%
GCGTGGGAGCTATGGAATGA+CGG + chr8_4:35091519-35091538 Msa1324720:intron 55.0%
ACATGTGGTGGTCGGTCGCA+AGG + chr8_4:35090291-35090310 Msa1324720:CDS 60.0%
ACATGTGGTGGTCGGTCGCA+AGG + chr8_4:35090291-35090310 Msa1324720:CDS 60.0%
AGGGACGGCGGCGAGATGAA+AGG + chr8_4:35090225-35090244 Msa1324720:CDS 65.0%
AGGGACGGCGGCGAGATGAA+AGG + chr8_4:35090225-35090244 Msa1324720:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 35090222 35091839 35090222 ID=Msa1324720;Name=Msa1324720
chr8_4 mRNA 35090222 35091839 35090222 ID=Msa1324720-mRNA-1;Parent=Msa1324720;Name=Msa1324720-mRNA-1;_AED=0.58;_eAED=0.58;_QI=0|0|0|0.5|1|1|2|0|148
chr8_4 exon 35090222 35090348 35090222 ID=Msa1324720-mRNA-1:exon:11137;Parent=Msa1324720-mRNA-1
chr8_4 exon 35091520 35091839 35091520 ID=Msa1324720-mRNA-1:exon:11138;Parent=Msa1324720-mRNA-1
chr8_4 CDS 35090222 35090348 35090222 ID=Msa1324720-mRNA-1:cds;Parent=Msa1324720-mRNA-1
chr8_4 CDS 35091520 35091839 35091520 ID=Msa1324720-mRNA-1:cds;Parent=Msa1324720-mRNA-1
Gene Sequence

>Msa1324720

ATGAGGGACGGCGGCGAGATGAAAGGTATCGAAATGATGGATCTGATGATTCATGGTATGGTGGCGAAGACATGTGGTGGTCGGTCGCAAGGTTCTCAGAGAGAGAGAGAGAGAGACGAACTTGGAGCGTGGGAGCTATGGAATGACGGTGAGTATCTACAGCTAATGGATCCATCATTAAATGATACATTTGTTCCCGAAGAAGTGCAAAGGTGCATTCATGTTGGTCTCTTATGTGTTGAGCATTATGCAAATGATCGACCAACAATATCTGATGCTATATCAGTGTTAACAAACAAATATGAACTCACAACCTTACCAAGAAGACCAGCATTCTATGTTACAAGAGAGATCCTTGAGGGAGAAACAACTTTGAATATGTCGGACACTGACACCTATTCTACAACAGCAATTTCTACCTCATGTGAAGTAGAAGGGAAAACATAA
Protein sequence

>Msa1324720

MRDGGEMKGIEMMDLMIHGMVAKTCGGRSQGSQRERERDELGAWELWNDGEYLQLMDPSLNDTFVPEEVQRCIHVGLLCVEHYANDRPTISDAISVLTNKYELTTLPRRPAFYVTREILEGETTLNMSDTDTYSTTAISTSCEVEGKT*