Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325740 | XP_013445393.1 | 92.398 | 342 | 16 | 1 | 1 | 332 | 3 | 344 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325740 | sp|Q9LTQ0|RTL2_ARATH | 50.147 | 341 | 150 | 5 | 5 | 332 | 58 | 391 | 1.35e-111 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325740 | A0A072TPL1 | 92.398 | 342 | 16 | 1 | 1 | 332 | 3 | 344 | 0.0 | 640 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1307130 | Msa1325740 | 0.912756 | 1.352053e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325740 | MtrunA17_Chr8g0360081 | 92.398 | 342 | 16 | 1 | 1 | 332 | 3 | 344 | 0.0 | 640 |
| Msa1325740 | MtrunA17_Chr3g0130581 | 75.872 | 344 | 71 | 2 | 1 | 332 | 3 | 346 | 0.0 | 521 |
| Msa1325740 | MtrunA17_Chr3g0119181 | 42.324 | 241 | 119 | 7 | 10 | 238 | 72 | 304 | 8.43e-50 | 168 |
| Msa1325740 | MtrunA17_Chr7g0276451 | 34.402 | 343 | 192 | 8 | 9 | 328 | 1544 | 1876 | 1.12e-47 | 172 |
| Msa1325740 | MtrunA17_Chr3g0119171 | 41.036 | 251 | 116 | 8 | 7 | 238 | 227 | 464 | 7.14e-46 | 163 |
| Msa1325740 | MtrunA17_Chr3g0119071 | 38.583 | 254 | 128 | 7 | 6 | 242 | 165 | 407 | 3.14e-41 | 150 |
| Msa1325740 | MtrunA17_Chr3g0136471 | 28.224 | 411 | 204 | 11 | 5 | 328 | 1291 | 1697 | 1.36e-34 | 134 |
| Msa1325740 | MtrunA17_Chr2g0292651 | 32.661 | 248 | 137 | 10 | 6 | 231 | 1136 | 1375 | 3.07e-27 | 112 |
| Msa1325740 | MtrunA17_Chr1g0179081 | 29.832 | 238 | 147 | 6 | 6 | 225 | 1163 | 1398 | 3.66e-26 | 109 |
| Msa1325740 | MtrunA17_Chr8g0368761 | 30.328 | 244 | 149 | 6 | 6 | 231 | 1140 | 1380 | 8.40e-26 | 108 |
| Msa1325740 | MtrunA17_Chr4g0065391 | 27.857 | 280 | 166 | 7 | 1 | 250 | 1195 | 1468 | 9.67e-23 | 99.4 |
| Msa1325740 | MtrunA17_Chr3g0119211 | 48.571 | 70 | 34 | 1 | 7 | 74 | 55 | 124 | 5.15e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1325740 | AT3G20420.1 | 50.147 | 341 | 150 | 5 | 5 | 332 | 58 | 391 | 1.37e-112 | 332 |
| Msa1325740 | AT5G45150.1 | 34.447 | 389 | 180 | 9 | 5 | 327 | 2 | 381 | 6.27e-56 | 196 |
| Msa1325740 | AT5G45150.1 | 36.015 | 261 | 144 | 6 | 2 | 249 | 410 | 660 | 4.46e-42 | 156 |
| Msa1325740 | AT5G45150.1 | 42.308 | 78 | 43 | 1 | 252 | 327 | 834 | 911 | 1.89e-12 | 68.9 |
| Msa1325740 | AT1G01040.1 | 35.876 | 354 | 189 | 7 | 7 | 328 | 1559 | 1906 | 7.72e-52 | 184 |
| Msa1325740 | AT1G01040.2 | 35.876 | 354 | 189 | 7 | 7 | 328 | 1560 | 1907 | 7.72e-52 | 184 |
| Msa1325740 | AT5G45150.2 | 36.015 | 261 | 144 | 6 | 2 | 249 | 214 | 464 | 2.86e-42 | 156 |
| Msa1325740 | AT5G45150.2 | 42.308 | 78 | 43 | 1 | 252 | 327 | 638 | 715 | 1.94e-12 | 68.6 |
| Msa1325740 | AT5G45150.2 | 43.662 | 71 | 38 | 1 | 259 | 327 | 115 | 185 | 1.92e-11 | 65.5 |
| Msa1325740 | AT5G45150.3 | 36.015 | 261 | 144 | 6 | 2 | 249 | 214 | 464 | 2.86e-42 | 156 |
| Msa1325740 | AT5G45150.3 | 42.308 | 78 | 43 | 1 | 252 | 327 | 638 | 715 | 1.94e-12 | 68.6 |
| Msa1325740 | AT5G45150.3 | 43.662 | 71 | 38 | 1 | 259 | 327 | 115 | 185 | 1.92e-11 | 65.5 |
| Msa1325740 | AT4G15417.1 | 36.667 | 240 | 133 | 6 | 7 | 234 | 29 | 261 | 2.09e-37 | 135 |
| Msa1325740 | AT4G15417.2 | 36.667 | 240 | 133 | 6 | 7 | 234 | 54 | 286 | 3.10e-37 | 135 |
| Msa1325740 | AT3G43920.3 | 25.907 | 386 | 225 | 9 | 4 | 332 | 1185 | 1566 | 4.35e-31 | 124 |
| Msa1325740 | AT3G43920.2 | 25.907 | 386 | 225 | 9 | 4 | 332 | 1195 | 1576 | 4.36e-31 | 124 |
| Msa1325740 | AT3G43920.6 | 25.907 | 386 | 225 | 9 | 4 | 332 | 967 | 1348 | 4.38e-31 | 124 |
| Msa1325740 | AT3G43920.1 | 25.907 | 386 | 225 | 9 | 4 | 332 | 1146 | 1527 | 4.72e-31 | 124 |
| Msa1325740 | AT3G43920.4 | 25.907 | 386 | 225 | 9 | 4 | 332 | 1184 | 1565 | 5.02e-31 | 124 |
| Msa1325740 | AT3G43920.5 | 31.667 | 240 | 150 | 3 | 4 | 233 | 1185 | 1420 | 9.46e-31 | 123 |
| Msa1325740 | AT3G03300.3 | 33.854 | 192 | 104 | 7 | 6 | 180 | 1148 | 1333 | 2.83e-22 | 98.6 |
| Msa1325740 | AT3G03300.1 | 33.854 | 192 | 104 | 7 | 6 | 180 | 1148 | 1333 | 2.83e-22 | 98.6 |
| Msa1325740 | AT3G03300.4 | 33.854 | 192 | 104 | 7 | 6 | 180 | 935 | 1120 | 3.08e-22 | 98.2 |
| Msa1325740 | AT3G03300.2 | 33.854 | 192 | 104 | 7 | 6 | 180 | 1134 | 1319 | 3.77e-22 | 98.2 |
| Msa1325740 | AT5G20320.2 | 28.030 | 264 | 153 | 8 | 1 | 234 | 1272 | 1528 | 1.53e-19 | 90.5 |
| Msa1325740 | AT5G20320.2 | 30.909 | 165 | 87 | 5 | 6 | 149 | 1077 | 1235 | 2.63e-11 | 65.5 |
| Msa1325740 | AT5G20320.3 | 28.030 | 264 | 153 | 8 | 1 | 234 | 1061 | 1317 | 1.55e-19 | 90.5 |
| Msa1325740 | AT5G20320.3 | 30.909 | 165 | 87 | 5 | 6 | 149 | 866 | 1024 | 3.17e-11 | 65.1 |
| Msa1325740 | AT5G20320.1 | 28.030 | 264 | 153 | 8 | 1 | 234 | 1286 | 1542 | 1.78e-19 | 90.1 |
| Msa1325740 | AT5G20320.1 | 30.909 | 165 | 87 | 5 | 6 | 149 | 1091 | 1249 | 2.93e-11 | 65.1 |
Find 85 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGGAAGTCAACTCTTTA+AGG | 0.113980 | 8_4:-38131145 | Msa1325740:three_prime_UTR |
| CGTTCGTAGGAAACGGATTC+AGG | 0.236317 | 8_4:+38134115 | None:intergenic |
| GCAGATATTAAGAGGTCTTT+TGG | 0.236581 | 8_4:-38132910 | Msa1325740:intron |
| GTTGAACGTGAGAATGATTT+TGG | 0.257919 | 8_4:-38133875 | Msa1325740:CDS |
| GTTCGTTGGTGACGCTGTTT+TGG | 0.267706 | 8_4:-38134086 | Msa1325740:CDS |
| TACCATCTGGAGTGGCTATC+TGG | 0.295887 | 8_4:+38131448 | None:intergenic |
| ATAGACACTGGCAGTGCTTT+TGG | 0.317059 | 8_4:+38132773 | None:intergenic |
| CTGTCAAAAGCATGGGAAAA+AGG | 0.319648 | 8_4:-38132823 | Msa1325740:CDS |
| ATCAGTGTTTACCTGTATAC+TGG | 0.337933 | 8_4:+38132540 | None:intergenic |
| GTTTACCTGTATACTGGTTT+AGG | 0.347893 | 8_4:+38132546 | None:intergenic |
| GATGGTAGACTCCAGATGTT+AGG | 0.353438 | 8_4:-38131432 | Msa1325740:CDS |
| CCGCGGCGTCCTTGATGATT+CGG | 0.354038 | 8_4:-38131374 | Msa1325740:CDS |
| GCGGCAGTGGAGAAGATAAT+TGG | 0.354408 | 8_4:-38134193 | Msa1325740:CDS |
| AGAAGTTATATGCAATTTGC+GGG | 0.397906 | 8_4:-38132581 | Msa1325740:CDS |
| CACATACTGCCCTTGTTGTA+AGG | 0.404823 | 8_4:+38131350 | None:intergenic |
| AGTCAACTCTTTAAGGTTGA+AGG | 0.408733 | 8_4:-38131138 | Msa1325740:three_prime_UTR |
| AGATCATCCAGTGTTACTAT+TGG | 0.408886 | 8_4:+38132885 | None:intergenic |
| TGCTGCACGAGCAAGTTTCT+CGG | 0.416918 | 8_4:+38133976 | None:intergenic |
| AGGTGTAAGAGAGGAAAATA+TGG | 0.418619 | 8_4:+38134047 | None:intergenic |
| CGCGGCGTCCTTGATGATTC+GGG | 0.419403 | 8_4:-38131373 | Msa1325740:CDS |
| TCTGGAACGAAAACCGCAAC+CGG | 0.421181 | 8_4:-38132865 | Msa1325740:CDS |
| TACTCATTTAAATTTATACT+TGG | 0.428028 | 8_4:-38131162 | Msa1325740:three_prime_UTR |
| GACCCTTGTAAAGGCCTTGA+TGG | 0.430926 | 8_4:-38132630 | Msa1325740:CDS |
| TAGTTCATGCACGGCAATCT+TGG | 0.445790 | 8_4:+38132686 | None:intergenic |
| AATAGTAACACTGGATGATC+TGG | 0.448961 | 8_4:-38132883 | Msa1325740:CDS |
| TAGAGCGTTGTCACCGGTTG+CGG | 0.451536 | 8_4:+38132852 | None:intergenic |
| GGAAGATTCAATTGCGGCAG+TGG | 0.460922 | 8_4:-38134206 | Msa1325740:CDS |
| ACTGCCAGTGTCTATGTTGA+TGG | 0.474062 | 8_4:-38132765 | Msa1325740:CDS |
| GTTCGTAGGAAACGGATTCA+GGG | 0.474695 | 8_4:+38134116 | None:intergenic |
| CTTGGCTGCTTCAATTTCAA+AGG | 0.495502 | 8_4:+38132605 | None:intergenic |
| ACAACATCAGCAAGAATCTT+CGG | 0.499053 | 8_4:+38133821 | None:intergenic |
| CTCGAGACGTTCGTAGGAAA+CGG | 0.499376 | 8_4:+38134108 | None:intergenic |
| ATGGTAGACTCCAGATGTTA+GGG | 0.499843 | 8_4:-38131431 | Msa1325740:CDS |
| CTAATAATTAAGTTAATAAG+TGG | 0.500550 | 8_4:-38131265 | Msa1325740:three_prime_UTR |
| AATGGCCTAAACCAGTATAC+AGG | 0.502150 | 8_4:-38132551 | Msa1325740:intron |
| CAGAAGTTATATGCAATTTG+CGG | 0.502857 | 8_4:-38132582 | Msa1325740:CDS |
| CTTCTAGAAGCTTCTTGTTG+AGG | 0.505073 | 8_4:+38134161 | None:intergenic |
| GCTCGTGCAGCAGTCAATCA+TGG | 0.514774 | 8_4:-38133965 | Msa1325740:CDS |
| AACATCTGGAGTCTACCATC+TGG | 0.515801 | 8_4:+38131435 | None:intergenic |
| AGAGAGTTGACCGGCGTCAA+CGG | 0.526134 | 8_4:+38134024 | None:intergenic |
| TGTCTATGTTGATGGAGAGT+TGG | 0.531039 | 8_4:-38132757 | Msa1325740:CDS |
| GTACCATCAAGGCCTTTACA+AGG | 0.533151 | 8_4:+38132627 | None:intergenic |
| TCGGACATCATGGTAGTGGC+AGG | 0.540791 | 8_4:+38132651 | None:intergenic |
| TTTGGAGCCAATAGTAACAC+TGG | 0.541015 | 8_4:-38132892 | Msa1325740:CDS |
| TACTGCTTGCTCTGATCAGA+AGG | 0.545679 | 8_4:-38132730 | Msa1325740:CDS |
| ATCAAGGCCTTTACAAGGGT+CGG | 0.546856 | 8_4:+38132632 | None:intergenic |
| ATGATTCGGGCCTTACAACA+AGG | 0.549568 | 8_4:-38131360 | Msa1325740:CDS |
| TTTACAAGGGTCGGACATCA+TGG | 0.550600 | 8_4:+38132641 | None:intergenic |
| GATTCGTGAGTTTGCTGATG+CGG | 0.552297 | 8_4:-38133897 | Msa1325740:CDS |
| AATTGCATATAACTTCTGCT+TGG | 0.554513 | 8_4:+38132587 | None:intergenic |
| AACTGAACAGAAGATGAAGA+TGG | 0.558212 | 8_4:-38134227 | None:intergenic |
| ATCTCATAGAGCGTTGTCAC+CGG | 0.560294 | 8_4:+38132846 | None:intergenic |
| ATGATGTCCGACCCTTGTAA+AGG | 0.565853 | 8_4:-38132639 | Msa1325740:CDS |
| ATGAGATCTGTCAAAAGCAT+GGG | 0.566763 | 8_4:-38132830 | Msa1325740:CDS |
| CGGATTCAGGGTAAGAAGTG+TGG | 0.566918 | 8_4:+38134128 | None:intergenic |
| GGATTCAGGGTAAGAAGTGT+GGG | 0.570162 | 8_4:+38134129 | None:intergenic |
| CTGATCAGAAGGACATTGCA+AGG | 0.577177 | 8_4:-38132719 | Msa1325740:CDS |
| AGGGTCGGACATCATGGTAG+TGG | 0.585876 | 8_4:+38132647 | None:intergenic |
| GGATGAAAAGTCTCGGCTGA+AGG | 0.589224 | 8_4:-38131409 | Msa1325740:CDS |
| CAATTTCAAAGGTACCATCA+AGG | 0.595839 | 8_4:+38132616 | None:intergenic |
| TTGTAAGGCCCGAATCATCA+AGG | 0.599006 | 8_4:+38131365 | None:intergenic |
| TATGAGATCTGTCAAAAGCA+TGG | 0.599359 | 8_4:-38132831 | Msa1325740:CDS |
| TACGAACGTCTCGAGTTCGT+TGG | 0.604550 | 8_4:-38134100 | Msa1325740:CDS |
| GAGATAAGACAATCGAGGAA+TGG | 0.616598 | 8_4:-38132798 | Msa1325740:CDS |
| CTCTCCATCAACATAGACAC+TGG | 0.622843 | 8_4:+38132761 | None:intergenic |
| TGTTAGGGGATGAAAAGTCT+CGG | 0.624865 | 8_4:-38131416 | Msa1325740:CDS |
| GAGTTGACCGGCGTCAACGG+AGG | 0.628031 | 8_4:+38134027 | None:intergenic |
| TACACGTTCTAGTTCATGCA+CGG | 0.628329 | 8_4:+38132677 | None:intergenic |
| GTCACAAATATCTTCTTCTG+AGG | 0.633804 | 8_4:+38131477 | None:intergenic |
| TCTTACACCTCCGTTGACGC+CGG | 0.637160 | 8_4:-38134034 | Msa1325740:CDS |
| TGATTCGGGCCTTACAACAA+GGG | 0.638369 | 8_4:-38131359 | Msa1325740:CDS |
| GTCCAGATAGCCACTCCAGA+TGG | 0.639689 | 8_4:-38131450 | Msa1325740:CDS |
| AACGAACTCGAGACGTTCGT+AGG | 0.640436 | 8_4:+38134102 | None:intergenic |
| ACGTAGGAGAGAGAGTTGAC+CGG | 0.653720 | 8_4:+38134015 | None:intergenic |
| TACCATCAAGGCCTTTACAA+GGG | 0.658897 | 8_4:+38132628 | None:intergenic |
| CGTCAACGGAGGTGTAAGAG+AGG | 0.671005 | 8_4:+38134038 | None:intergenic |
| CTGGAGTCTACCATCTGGAG+TGG | 0.672296 | 8_4:+38131440 | None:intergenic |
| AACAGCATTGAGAAAGACGA+AGG | 0.690091 | 8_4:-38131504 | Msa1325740:intron |
| TGGAGTGGCTATCTGGACAG+AGG | 0.691402 | 8_4:+38131455 | None:intergenic |
| TGGTAGACTCCAGATGTTAG+GGG | 0.698473 | 8_4:-38131430 | Msa1325740:CDS |
| GAAGATGGAAGATTCAATTG+CGG | 0.703515 | 8_4:-38134212 | Msa1325740:CDS |
| CCGAATCATCAAGGACGCCG+CGG | 0.727934 | 8_4:+38131374 | None:intergenic |
| GAAGGATGCACAGAACTCCG+CGG | 0.742068 | 8_4:-38131391 | Msa1325740:CDS |
| TGCTGACATTAGCAGCACGT+AGG | 0.745064 | 8_4:+38133999 | None:intergenic |
| AGGTTGAGATAAGACAATCG+AGG | 0.766851 | 8_4:-38132803 | Msa1325740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTATAACGAATTAATT+AGG | + | chr8_4:38131895-38131914 | None:intergenic | 10.0% |
| !! | TTCTTATAATTAACTAATTA+AGG | + | chr8_4:38133159-38133178 | None:intergenic | 10.0% |
| !! | TAGATTTATTTAATTGGAAA+AGG | - | chr8_4:38131833-38131852 | Msa1325740:intron | 15.0% |
| !! | TATTATATTATATTGTGTGT+TGG | - | chr8_4:38132344-38132363 | Msa1325740:intron | 15.0% |
| !!! | TTGTTTTTATTTTTTGATGA+AGG | - | chr8_4:38134030-38134049 | Msa1325740:CDS | 15.0% |
| !! | CTAATAATTAAGTTAATAAG+TGG | - | chr8_4:38134083-38134102 | Msa1325740:CDS | 15.0% |
| !! | TCAAATAAAAAGTTAATAAG+TGG | - | chr8_4:38134115-38134134 | Msa1325740:CDS | 15.0% |
| !! | TACTCATTTAAATTTATACT+TGG | - | chr8_4:38134186-38134205 | Msa1325740:CDS | 15.0% |
| !!! | ATTTTGATCTTAAGAGATTA+TGG | - | chr8_4:38131585-38131604 | Msa1325740:intron | 20.0% |
| !!! | TTTTGATCTTAAGAGATTAT+GGG | - | chr8_4:38131586-38131605 | Msa1325740:intron | 20.0% |
| !!! | AAATTATTGACCATGATTTT+AGG | - | chr8_4:38132235-38132254 | Msa1325740:intron | 20.0% |
| !! | AAAAATTACAAGCATTTATC+AGG | + | chr8_4:38132414-38132433 | None:intergenic | 20.0% |
| !!! | TAAATGCTTGTAATTTTTGT+TGG | - | chr8_4:38132416-38132435 | Msa1325740:intron | 20.0% |
| !! | TAGAATAGTTTGGAAATATA+CGG | - | chr8_4:38132937-38132956 | Msa1325740:intron | 20.0% |
| !!! | ATAATACTCACATCATTTTT+TGG | + | chr8_4:38132976-38132995 | None:intergenic | 20.0% |
| !!! | AAAATTCTAAGACTTTATCA+GGG | + | chr8_4:38133069-38133088 | None:intergenic | 20.0% |
| !!! | TAAAATTCTAAGACTTTATC+AGG | + | chr8_4:38133070-38133089 | None:intergenic | 20.0% |
| !! | TATTATTTCATATACTCAAG+TGG | - | chr8_4:38133191-38133210 | Msa1325740:intron | 20.0% |
| !! | AAGTAAGAAATCAGTTTAAA+AGG | + | chr8_4:38133818-38133837 | None:intergenic | 20.0% |
| !!! | AACTTTTTATTTGAAGAAGA+TGG | + | chr8_4:38134109-38134128 | None:intergenic | 20.0% |
| !!! | GATTTTGGTATTGTTTTGTA+TGG | - | chr8_4:38131488-38131507 | Msa1325740:CDS | 25.0% |
| !!! | CATGCTTCTTTTAATTTTGT+TGG | - | chr8_4:38131620-38131639 | Msa1325740:intron | 25.0% |
| ! | TGGGACTAGATTTATTTAAT+TGG | - | chr8_4:38131827-38131846 | Msa1325740:intron | 25.0% |
| ! | CCTTAAAAACATAGTTACAT+CGG | + | chr8_4:38132148-38132167 | None:intergenic | 25.0% |
| !!! | ATGTTTTTAAGGCAACATTT+TGG | - | chr8_4:38132156-38132175 | Msa1325740:intron | 25.0% |
| !! | TTTTGGTAAATAGGTTAGAA+TGG | - | chr8_4:38132173-38132192 | Msa1325740:intron | 25.0% |
| ! | TTTGGTAAATAGGTTAGAAT+GGG | - | chr8_4:38132174-38132193 | Msa1325740:intron | 25.0% |
| ! | AATAAGTTAGATGGTATAGT+AGG | - | chr8_4:38132270-38132289 | Msa1325740:intron | 25.0% |
| ! | ATAAGTTAGATGGTATAGTA+GGG | - | chr8_4:38132271-38132290 | Msa1325740:intron | 25.0% |
| !! | ACTTTTATATTACAGAAACC+AGG | + | chr8_4:38132889-38132908 | None:intergenic | 25.0% |
| !! | AGAATTTTACAATACCCAAA+TGG | - | chr8_4:38133081-38133100 | Msa1325740:intron | 25.0% |
| !! | GAATTTTACAATACCCAAAT+GGG | - | chr8_4:38133082-38133101 | Msa1325740:intron | 25.0% |
| ! | AATCAATTAACATCCCATTT+GGG | + | chr8_4:38133098-38133117 | None:intergenic | 25.0% |
| ! | AATGGATATAAATCATTCAC+TGG | + | chr8_4:38133125-38133144 | None:intergenic | 25.0% |
| ! | TCAAATTATAGGATCAATCA+AGG | - | chr8_4:38133223-38133242 | Msa1325740:intron | 25.0% |
| !!! | ATTCATGTGTATTTTCTAGT+TGG | - | chr8_4:38133386-38133405 | Msa1325740:intron | 25.0% |
| ! | CGAACAAATTAAAAATAGCA+AGG | + | chr8_4:38133760-38133779 | None:intergenic | 25.0% |
| ! | AAGAAATCAGTTTAAAAGGA+GGG | + | chr8_4:38133814-38133833 | None:intergenic | 25.0% |
| ! | TAAGAAATCAGTTTAAAAGG+AGG | + | chr8_4:38133815-38133834 | None:intergenic | 25.0% |
| !! | TTTGGTATTGTTTTGTATGG+TGG | - | chr8_4:38131491-38131510 | Msa1325740:CDS | 30.0% |
| !! | TATTGTTTTGTATGGTGGTT+TGG | - | chr8_4:38131496-38131515 | Msa1325740:CDS | 30.0% |
| ! | TACATGTGTTATTGTCATGT+TGG | - | chr8_4:38131724-38131743 | Msa1325740:intron | 30.0% |
| AACTGTAGTAACTTAGTTTC+AGG | + | chr8_4:38131869-38131888 | None:intergenic | 30.0% | |
| !! | CACACACATGATTGATTTTT+GGG | + | chr8_4:38131959-38131978 | None:intergenic | 30.0% |
| !! | ACACACACATGATTGATTTT+TGG | + | chr8_4:38131960-38131979 | None:intergenic | 30.0% |
| ATTTGTGGTAAGCAACATTA+CGG | + | chr8_4:38132032-38132051 | None:intergenic | 30.0% | |
| !! | CCGATGTAACTATGTTTTTA+AGG | - | chr8_4:38132145-38132164 | Msa1325740:intron | 30.0% |
| !! | AAGGCAACATTTTGGTAAAT+AGG | - | chr8_4:38132164-38132183 | Msa1325740:intron | 30.0% |
| CATTTGGCAAATAAGTTAGA+TGG | - | chr8_4:38132261-38132280 | Msa1325740:intron | 30.0% | |
| TAAGTTAGATGGTATAGTAG+GGG | - | chr8_4:38132272-38132291 | Msa1325740:intron | 30.0% | |
| ! | TTTTGTTGGCAGATATTAAG+AGG | - | chr8_4:38132430-38132449 | Msa1325740:intron | 30.0% |
| AATTGCATATAACTTCTGCT+TGG | + | chr8_4:38132764-38132783 | None:intergenic | 30.0% | |
| CAGAAGTTATATGCAATTTG+CGG | - | chr8_4:38132766-38132785 | Msa1325740:CDS | 30.0% | |
| AGAAGTTATATGCAATTTGC+GGG | - | chr8_4:38132767-38132786 | Msa1325740:CDS | 30.0% | |
| TATGCCATTGCAAATTATAG+TGG | + | chr8_4:38132840-38132859 | None:intergenic | 30.0% | |
| AAAACATTCATTCATAGTCC+TGG | - | chr8_4:38132868-38132887 | Msa1325740:CDS | 30.0% | |
| ATTTCCAAACTATTCTACAG+AGG | + | chr8_4:38132934-38132953 | None:intergenic | 30.0% | |
| !!! | CGCATAACTTTTTTGTTAAC+CGG | - | chr8_4:38133013-38133032 | Msa1325740:intron | 30.0% |
| GCTAAAACTTAAAACTGTTC+CGG | + | chr8_4:38133035-38133054 | None:intergenic | 30.0% | |
| GAATCAATTAACATCCCATT+TGG | + | chr8_4:38133099-38133118 | None:intergenic | 30.0% | |
| GATATAAATCATTCACTGGA+AGG | + | chr8_4:38133121-38133140 | None:intergenic | 30.0% | |
| ATTAAGGCAGACTTTGTAAA+TGG | + | chr8_4:38133143-38133162 | None:intergenic | 30.0% | |
| GGAGACAAATCTCAAATTAT+AGG | - | chr8_4:38133212-38133231 | Msa1325740:intron | 30.0% | |
| !!! | AGCTAGATTTTAGGATAGTT+TGG | - | chr8_4:38133325-38133344 | Msa1325740:intron | 30.0% |
| ! | GAAGTTTTACTACATCTACA+TGG | + | chr8_4:38133658-38133677 | None:intergenic | 30.0% |
| CTCGAGTTTATCTTCATATT+AGG | + | chr8_4:38133693-38133712 | None:intergenic | 30.0% | |
| ! | ACTCGAGCGATAATAATTTT+TGG | - | chr8_4:38133706-38133725 | Msa1325740:intron | 30.0% |
| AAAAAGTTAATAAGTGGCCA+TGG | - | chr8_4:38134121-38134140 | Msa1325740:CDS | 30.0% | |
| GAAGATGGAAGATTCAATTG+CGG | - | chr8_4:38131136-38131155 | Msa1325740:three_prime_UTR | 35.0% | |
| AGGTGTAAGAGAGGAAAATA+TGG | + | chr8_4:38131304-38131323 | None:intergenic | 35.0% | |
| ! | GTTGAACGTGAGAATGATTT+TGG | - | chr8_4:38131473-38131492 | Msa1325740:CDS | 35.0% |
| ACAACATCAGCAAGAATCTT+CGG | + | chr8_4:38131530-38131549 | None:intergenic | 35.0% | |
| TGATCTTAAGAGATTATGGG+TGG | - | chr8_4:38131589-38131608 | Msa1325740:intron | 35.0% | |
| TGTTATTGTCATGTTGGTGT+GGG | - | chr8_4:38131730-38131749 | Msa1325740:intron | 35.0% | |
| ! | ACCCAGGTTTACATTGATTA+TGG | - | chr8_4:38131807-38131826 | Msa1325740:intron | 35.0% |
| CCCATAATCAATGTAAACCT+GGG | + | chr8_4:38131811-38131830 | None:intergenic | 35.0% | |
| ! | CCCAGGTTTACATTGATTAT+GGG | - | chr8_4:38131808-38131827 | Msa1325740:intron | 35.0% |
| TCCCATAATCAATGTAAACC+TGG | + | chr8_4:38131812-38131831 | None:intergenic | 35.0% | |
| TTTGTGGTAAGCAACATTAC+GGG | + | chr8_4:38132031-38132050 | None:intergenic | 35.0% | |
| ! | GTAATGTTGCTTACCACAAA+TGG | - | chr8_4:38132031-38132050 | Msa1325740:intron | 35.0% |
| ! | TAATGCACTCTATCTTTTGC+TGG | - | chr8_4:38132094-38132113 | Msa1325740:intron | 35.0% |
| ATAGGTTAGAATGGGATAGT+AGG | - | chr8_4:38132182-38132201 | Msa1325740:intron | 35.0% | |
| TAGGTTAGAATGGGATAGTA+GGG | - | chr8_4:38132183-38132202 | Msa1325740:intron | 35.0% | |
| CCAAATGTTGCCTAAAATCA+TGG | + | chr8_4:38132248-38132267 | None:intergenic | 35.0% | |
| ! | CCATGATTTTAGGCAACATT+TGG | - | chr8_4:38132245-38132264 | Msa1325740:intron | 35.0% |
| ! | GCAGATATTAAGAGGTCTTT+TGG | - | chr8_4:38132438-38132457 | Msa1325740:intron | 35.0% |
| ! | AGATCATCCAGTGTTACTAT+TGG | + | chr8_4:38132466-38132485 | None:intergenic | 35.0% |
| AATAGTAACACTGGATGATC+TGG | - | chr8_4:38132465-38132484 | Msa1325740:intron | 35.0% | |
| TATGAGATCTGTCAAAAGCA+TGG | - | chr8_4:38132517-38132536 | Msa1325740:intron | 35.0% | |
| ! | ATGAGATCTGTCAAAAGCAT+GGG | - | chr8_4:38132518-38132537 | Msa1325740:intron | 35.0% |
| !! | CAATTTCAAAGGTACCATCA+AGG | + | chr8_4:38132735-38132754 | None:intergenic | 35.0% |
| !! | GTTTACCTGTATACTGGTTT+AGG | + | chr8_4:38132805-38132824 | None:intergenic | 35.0% |
| ATCAGTGTTTACCTGTATAC+TGG | + | chr8_4:38132811-38132830 | None:intergenic | 35.0% | |
| GTTTCCTCTGTAGAATAGTT+TGG | - | chr8_4:38132927-38132946 | Msa1325740:intron | 35.0% | |
| ATAGTTTGGAAATATACGGC+AGG | - | chr8_4:38132941-38132960 | Msa1325740:intron | 35.0% | |
| GATCAATCAAGGATTCTGAT+AGG | - | chr8_4:38133234-38133253 | Msa1325740:intron | 35.0% | |
| !! | CTTTCTTCTAGAATATGCCT+AGG | + | chr8_4:38133263-38133282 | None:intergenic | 35.0% |
| ! | GCATATTCTAGAAGAAAGTG+AGG | - | chr8_4:38133265-38133284 | Msa1325740:intron | 35.0% |
| ! | GTGACTTGAAGCTAGATTTT+AGG | - | chr8_4:38133316-38133335 | Msa1325740:intron | 35.0% |
| !!! | GTATTTTCTAGTTGGTCGTT+AGG | - | chr8_4:38133394-38133413 | Msa1325740:intron | 35.0% |
| GAAAAGGAAAGATAAACCAG+AGG | + | chr8_4:38133466-38133485 | None:intergenic | 35.0% | |
| ! | ATCTTTCCTTTTCTGCTGTA+AGG | - | chr8_4:38133473-38133492 | Msa1325740:intron | 35.0% |
| GTCACAAATATCTTCTTCTG+AGG | + | chr8_4:38133874-38133893 | None:intergenic | 35.0% | |
| ! | TCTCTCATCTAACTTTTCCA+TGG | + | chr8_4:38134141-38134160 | None:intergenic | 35.0% |
| ACTTGGAAGTCAACTCTTTA+AGG | - | chr8_4:38134203-38134222 | Msa1325740:CDS | 35.0% | |
| !! | AGTCAACTCTTTAAGGTTGA+AGG | - | chr8_4:38134210-38134229 | Msa1325740:CDS | 35.0% |
| ! | CTTCTAGAAGCTTCTTGTTG+AGG | + | chr8_4:38131190-38131209 | None:intergenic | 40.0% |
| ! | GTGTTATTGTCATGTTGGTG+TGG | - | chr8_4:38131729-38131748 | Msa1325740:intron | 40.0% |
| TCTATGTAAACTTGCAACCC+AGG | - | chr8_4:38131791-38131810 | Msa1325740:intron | 40.0% | |
| TAAGCAACATTACGGGTTTG+TGG | + | chr8_4:38132024-38132043 | None:intergenic | 40.0% | |
| ! | ATGTTGCTTACCACAAATGG+TGG | - | chr8_4:38132034-38132053 | Msa1325740:intron | 40.0% |
| ! | CTTACCACAAATGGTGGTTT+TGG | - | chr8_4:38132040-38132059 | Msa1325740:intron | 40.0% |
| AACTCCAAAACCACCATTTG+TGG | + | chr8_4:38132047-38132066 | None:intergenic | 40.0% | |
| TCATTCACGACATGGTATCA+TGG | - | chr8_4:38132122-38132141 | Msa1325740:intron | 40.0% | |
| TACAAGCATTTATCAGGCAG+TGG | + | chr8_4:38132408-38132427 | None:intergenic | 40.0% | |
| ! | TTTGGAGCCAATAGTAACAC+TGG | - | chr8_4:38132456-38132475 | Msa1325740:intron | 40.0% |
| ! | CTGTCAAAAGCATGGGAAAA+AGG | - | chr8_4:38132525-38132544 | Msa1325740:intron | 40.0% |
| AGGTTGAGATAAGACAATCG+AGG | - | chr8_4:38132545-38132564 | Msa1325740:intron | 40.0% | |
| GAGATAAGACAATCGAGGAA+TGG | - | chr8_4:38132550-38132569 | Msa1325740:intron | 40.0% | |
| ! | TGTCTATGTTGATGGAGAGT+TGG | - | chr8_4:38132591-38132610 | Msa1325740:CDS | 40.0% |
| !! | TACACGTTCTAGTTCATGCA+CGG | + | chr8_4:38132674-38132693 | None:intergenic | 40.0% |
| TACCATCAAGGCCTTTACAA+GGG | + | chr8_4:38132723-38132742 | None:intergenic | 40.0% | |
| CTTGGCTGCTTCAATTTCAA+AGG | + | chr8_4:38132746-38132765 | None:intergenic | 40.0% | |
| CAATTTGCGGGACGAAAAAA+TGG | - | chr8_4:38132779-38132798 | Msa1325740:CDS | 40.0% | |
| AATGGCCTAAACCAGTATAC+AGG | - | chr8_4:38132797-38132816 | Msa1325740:CDS | 40.0% | |
| CCATTGCAAATTATAGTGGC+AGG | + | chr8_4:38132836-38132855 | None:intergenic | 40.0% | |
| ! | CCTGCCACTATAATTTGCAA+TGG | - | chr8_4:38132833-38132852 | Msa1325740:CDS | 40.0% |
| AAGTGCATCTTCTTGTCATC+TGG | - | chr8_4:38132905-38132924 | Msa1325740:CDS | 40.0% | |
| TCTAGAAGAAAGTGAGGTCA+TGG | - | chr8_4:38133271-38133290 | Msa1325740:intron | 40.0% | |
| CTAGAAGAAAGTGAGGTCAT+GGG | - | chr8_4:38133272-38133291 | Msa1325740:intron | 40.0% | |
| TAGAAGAAAGTGAGGTCATG+GGG | - | chr8_4:38133273-38133292 | Msa1325740:intron | 40.0% | |
| TATTGCGAGTCAAGTAAGTG+AGG | - | chr8_4:38133357-38133376 | Msa1325740:intron | 40.0% | |
| ATTGCGAGTCAAGTAAGTGA+GGG | - | chr8_4:38133358-38133377 | Msa1325740:intron | 40.0% | |
| !! | TAGGAGCATAGCTTTGGATT+AGG | - | chr8_4:38133432-38133451 | Msa1325740:intron | 40.0% |
| AGATCACCTTACAGCAGAAA+AGG | + | chr8_4:38133482-38133501 | None:intergenic | 40.0% | |
| CGTCTTTCTCAATGCTGTTA+CGG | + | chr8_4:38133843-38133862 | None:intergenic | 40.0% | |
| ! | AACAGCATTGAGAAAGACGA+AGG | - | chr8_4:38133844-38133863 | Msa1325740:CDS | 40.0% |
| ATGGTAGACTCCAGATGTTA+GGG | - | chr8_4:38133917-38133936 | Msa1325740:CDS | 40.0% | |
| ! | ACTTTTCATCCCCTAACATC+TGG | + | chr8_4:38133930-38133949 | None:intergenic | 40.0% |
| TGTTAGGGGATGAAAAGTCT+CGG | - | chr8_4:38133932-38133951 | Msa1325740:CDS | 40.0% | |
| ! | GGATTCAGGGTAAGAAGTGT+GGG | + | chr8_4:38131222-38131241 | None:intergenic | 45.0% |
| ! | GTTCGTAGGAAACGGATTCA+GGG | + | chr8_4:38131235-38131254 | None:intergenic | 45.0% |
| !!! | TTCGTTGGTGACGCTGTTTT+GGG | - | chr8_4:38131263-38131282 | Msa1325740:three_prime_UTR | 45.0% |
| !! | GATTCGTGAGTTTGCTGATG+CGG | - | chr8_4:38131451-38131470 | Msa1325740:CDS | 45.0% |
| ! | GCACTCTATCTTTTGCTGGA+TGG | - | chr8_4:38132098-38132117 | Msa1325740:intron | 45.0% |
| TGGATGGTTCATTCACGACA+TGG | - | chr8_4:38132114-38132133 | Msa1325740:intron | 45.0% | |
| !! | ATCTCATAGAGCGTTGTCAC+CGG | + | chr8_4:38132505-38132524 | None:intergenic | 45.0% |
| ! | ATAGACACTGGCAGTGCTTT+TGG | + | chr8_4:38132578-38132597 | None:intergenic | 45.0% |
| ACTGCCAGTGTCTATGTTGA+TGG | - | chr8_4:38132583-38132602 | Msa1325740:CDS | 45.0% | |
| CTCTCCATCAACATAGACAC+TGG | + | chr8_4:38132590-38132609 | None:intergenic | 45.0% | |
| TACTGCTTGCTCTGATCAGA+AGG | - | chr8_4:38132618-38132637 | Msa1325740:CDS | 45.0% | |
| CTGATCAGAAGGACATTGCA+AGG | - | chr8_4:38132629-38132648 | Msa1325740:CDS | 45.0% | |
| TAGTTCATGCACGGCAATCT+TGG | + | chr8_4:38132665-38132684 | None:intergenic | 45.0% | |
| TTTACAAGGGTCGGACATCA+TGG | + | chr8_4:38132710-38132729 | None:intergenic | 45.0% | |
| ATGATGTCCGACCCTTGTAA+AGG | - | chr8_4:38132709-38132728 | Msa1325740:CDS | 45.0% | |
| ATCAAGGCCTTTACAAGGGT+CGG | + | chr8_4:38132719-38132738 | None:intergenic | 45.0% | |
| GTACCATCAAGGCCTTTACA+AGG | + | chr8_4:38132724-38132743 | None:intergenic | 45.0% | |
| AGGATTCTGATAGGACACCT+AGG | - | chr8_4:38133243-38133262 | Msa1325740:intron | 45.0% | |
| AGAAGAAAGTGAGGTCATGG+GGG | - | chr8_4:38133274-38133293 | Msa1325740:intron | 45.0% | |
| TTGCGAGTCAAGTAAGTGAG+GGG | - | chr8_4:38133359-38133378 | Msa1325740:intron | 45.0% | |
| TCGTTAGGAGAGTTTCTCTC+TGG | - | chr8_4:38133409-38133428 | Msa1325740:intron | 45.0% | |
| TAGGAGAGTTTCTCTCTGGT+AGG | - | chr8_4:38133413-38133432 | Msa1325740:intron | 45.0% | |
| !! | CTGTGCAACCTTTTTCACTC+TGG | - | chr8_4:38133511-38133530 | Msa1325740:intron | 45.0% |
| !! | GCAACCTTTTTCACTCTGGT+AGG | - | chr8_4:38133515-38133534 | Msa1325740:intron | 45.0% |
| TGCTCCTACCAGAGTGAAAA+AGG | + | chr8_4:38133522-38133541 | None:intergenic | 45.0% | |
| GCTACTCAGAGAAGTGAACA+AGG | + | chr8_4:38133596-38133615 | None:intergenic | 45.0% | |
| ! | AACATCTGGAGTCTACCATC+TGG | + | chr8_4:38133916-38133935 | None:intergenic | 45.0% |
| GATGGTAGACTCCAGATGTT+AGG | - | chr8_4:38133916-38133935 | Msa1325740:CDS | 45.0% | |
| TGGTAGACTCCAGATGTTAG+GGG | - | chr8_4:38133918-38133937 | Msa1325740:CDS | 45.0% | |
| TTGTAAGGCCCGAATCATCA+AGG | + | chr8_4:38133986-38134005 | None:intergenic | 45.0% | |
| ! | ATGATTCGGGCCTTACAACA+AGG | - | chr8_4:38133988-38134007 | Msa1325740:CDS | 45.0% |
| ! | TGATTCGGGCCTTACAACAA+GGG | - | chr8_4:38133989-38134008 | Msa1325740:CDS | 45.0% |
| ! | CACATACTGCCCTTGTTGTA+AGG | + | chr8_4:38134001-38134020 | None:intergenic | 45.0% |
| GGAAGATTCAATTGCGGCAG+TGG | - | chr8_4:38131142-38131161 | Msa1325740:three_prime_UTR | 50.0% | |
| GCGGCAGTGGAGAAGATAAT+TGG | - | chr8_4:38131155-38131174 | Msa1325740:three_prime_UTR | 50.0% | |
| CGGATTCAGGGTAAGAAGTG+TGG | + | chr8_4:38131223-38131242 | None:intergenic | 50.0% | |
| ! | CGTTCGTAGGAAACGGATTC+AGG | + | chr8_4:38131236-38131255 | None:intergenic | 50.0% |
| CTCGAGACGTTCGTAGGAAA+CGG | + | chr8_4:38131243-38131262 | None:intergenic | 50.0% | |
| AACGAACTCGAGACGTTCGT+AGG | + | chr8_4:38131249-38131268 | None:intergenic | 50.0% | |
| TACGAACGTCTCGAGTTCGT+TGG | - | chr8_4:38131248-38131267 | Msa1325740:three_prime_UTR | 50.0% | |
| !!! | GTTCGTTGGTGACGCTGTTT+TGG | - | chr8_4:38131262-38131281 | Msa1325740:three_prime_UTR | 50.0% |
| ACGTAGGAGAGAGAGTTGAC+CGG | + | chr8_4:38131336-38131355 | None:intergenic | 50.0% | |
| TGCTGACATTAGCAGCACGT+AGG | + | chr8_4:38131352-38131371 | None:intergenic | 50.0% | |
| TGCTGCACGAGCAAGTTTCT+CGG | + | chr8_4:38131375-38131394 | None:intergenic | 50.0% | |
| TGGTGTGGGACACTAAGTGT+CGG | - | chr8_4:38131744-38131763 | Msa1325740:intron | 50.0% | |
| CAGGCAGTGGCAAAGTTGTT+TGG | + | chr8_4:38132395-38132414 | None:intergenic | 50.0% | |
| ! | TCTGGAACGAAAACCGCAAC+CGG | - | chr8_4:38132483-38132502 | Msa1325740:intron | 50.0% |
| GACCCTTGTAAAGGCCTTGA+TGG | - | chr8_4:38132718-38132737 | Msa1325740:CDS | 50.0% | |
| ATGGGGGAGAGAATGGAAGT+TGG | - | chr8_4:38133290-38133309 | Msa1325740:intron | 50.0% | |
| ! | CTCTGGTAGGAGCATAGCTT+TGG | - | chr8_4:38133426-38133445 | Msa1325740:intron | 50.0% |
| ! | TACCATCTGGAGTGGCTATC+TGG | + | chr8_4:38133903-38133922 | None:intergenic | 50.0% |
| GGATGAAAAGTCTCGGCTGA+AGG | - | chr8_4:38133939-38133958 | Msa1325740:CDS | 50.0% | |
| ! | CGTCAACGGAGGTGTAAGAG+AGG | + | chr8_4:38131313-38131332 | None:intergenic | 55.0% |
| TCTTACACCTCCGTTGACGC+CGG | - | chr8_4:38131314-38131333 | Msa1325740:three_prime_UTR | 55.0% | |
| AGAGAGTTGACCGGCGTCAA+CGG | + | chr8_4:38131327-38131346 | None:intergenic | 55.0% | |
| GCTCGTGCAGCAGTCAATCA+TGG | - | chr8_4:38131383-38131402 | Msa1325740:CDS | 55.0% | |
| !! | TAGAGCGTTGTCACCGGTTG+CGG | + | chr8_4:38132499-38132518 | None:intergenic | 55.0% |
| !! | TCGGACATCATGGTAGTGGC+AGG | + | chr8_4:38132700-38132719 | None:intergenic | 55.0% |
| AGGGTCGGACATCATGGTAG+TGG | + | chr8_4:38132704-38132723 | None:intergenic | 55.0% | |
| TGAGGTCATGGGGGAGAGAA+TGG | - | chr8_4:38133283-38133302 | Msa1325740:intron | 55.0% | |
| GGATTAGGACTCTCTGCCTC+TGG | - | chr8_4:38133447-38133466 | Msa1325740:intron | 55.0% | |
| TGGAGTGGCTATCTGGACAG+AGG | + | chr8_4:38133896-38133915 | None:intergenic | 55.0% | |
| GTCCAGATAGCCACTCCAGA+TGG | - | chr8_4:38133898-38133917 | Msa1325740:CDS | 55.0% | |
| CTGGAGTCTACCATCTGGAG+TGG | + | chr8_4:38133911-38133930 | None:intergenic | 55.0% | |
| GAAGGATGCACAGAACTCCG+CGG | - | chr8_4:38133957-38133976 | Msa1325740:CDS | 55.0% | |
| CCGAATCATCAAGGACGCCG+CGG | + | chr8_4:38133977-38133996 | None:intergenic | 60.0% | |
| ! | CCGCGGCGTCCTTGATGATT+CGG | - | chr8_4:38133974-38133993 | Msa1325740:CDS | 60.0% |
| ! | CGCGGCGTCCTTGATGATTC+GGG | - | chr8_4:38133975-38133994 | Msa1325740:CDS | 60.0% |
| GAGTTGACCGGCGTCAACGG+AGG | + | chr8_4:38131324-38131343 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 38131134 | 38134236 | 38131134 | ID=Msa1325740;Name=Msa1325740 |
| chr8_4 | mRNA | 38131134 | 38134236 | 38131134 | ID=Msa1325740-mRNA-1;Parent=Msa1325740;Name=Msa1325740-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0.66|1|1|1|3|213|332 |
| chr8_4 | exon | 38131134 | 38131521 | 38131134 | ID=Msa1325740-mRNA-1:exon:11657;Parent=Msa1325740-mRNA-1 |
| chr8_4 | exon | 38132552 | 38132928 | 38132552 | ID=Msa1325740-mRNA-1:exon:11656;Parent=Msa1325740-mRNA-1 |
| chr8_4 | exon | 38133790 | 38134236 | 38133790 | ID=Msa1325740-mRNA-1:exon:11655;Parent=Msa1325740-mRNA-1 |
| chr8_4 | CDS | 38133790 | 38134236 | 38133790 | ID=Msa1325740-mRNA-1:cds;Parent=Msa1325740-mRNA-1 |
| chr8_4 | CDS | 38132552 | 38132928 | 38132552 | ID=Msa1325740-mRNA-1:cds;Parent=Msa1325740-mRNA-1 |
| chr8_4 | CDS | 38131347 | 38131521 | 38131347 | ID=Msa1325740-mRNA-1:cds;Parent=Msa1325740-mRNA-1 |
| chr8_4 | three_prime_UTR | 38131134 | 38131346 | 38131134 | ID=Msa1325740-mRNA-1:three_prime_utr;Parent=Msa1325740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
