Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328820 | XP_010446577.2 | 90.357 | 280 | 0 | 1 | 1 | 253 | 1 | 280 | 6.98e-175 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328820 | sp|P80553|H3_NARPS | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.17e-93 | 274 |
| Msa1328820 | sp|P80553|H3_NARPS | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.77e-80 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328820 | A0A3S3Q207 | 95.703 | 256 | 8 | 1 | 1 | 253 | 1 | 256 | 9.80e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1250210 | Msa1328820 | 0.881119 | 3.128603e-70 | -8.615850e-47 |
| Msa1205160 | Msa1328820 | 0.806891 | 6.598953e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328820 | MtrunA17_Chr4g0054151 | 100.000 | 136 | 0 | 0 | 118 | 253 | 4 | 139 | 5.72e-95 | 275 |
| Msa1328820 | MtrunA17_Chr4g0054151 | 90.441 | 136 | 10 | 1 | 1 | 133 | 4 | 139 | 3.33e-81 | 240 |
| Msa1328820 | MtrunA17_Chr4g0054161 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1328820 | MtrunA17_Chr4g0054161 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1328820 | MtrunA17_Chr8g0363741 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1328820 | MtrunA17_Chr8g0363741 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1328820 | MtrunA17_Chr1g0156021 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1328820 | MtrunA17_Chr1g0156021 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1328820 | MtrunA17_Chr8g0388121 | 99.265 | 136 | 1 | 0 | 118 | 253 | 1 | 136 | 3.18e-94 | 273 |
| Msa1328820 | MtrunA17_Chr8g0388121 | 89.706 | 136 | 11 | 1 | 1 | 133 | 1 | 136 | 1.73e-80 | 238 |
| Msa1328820 | MtrunA17_Chr5g0410931 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr5g0410931 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr5g0410951 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr5g0410951 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr8g0383851 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr8g0383851 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr8g0383781 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr8g0383781 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr8g0390361 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr8g0390361 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr2g0295191 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr2g0295191 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr7g0237661 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr7g0237661 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr4g0033041 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr4g0033041 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr7g0218971 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr7g0218971 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr4g0046301 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr4g0046301 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr8g0364801 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1328820 | MtrunA17_Chr8g0364801 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1328820 | MtrunA17_Chr2g0319141 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 2.69e-88 | 258 |
| Msa1328820 | MtrunA17_Chr2g0319141 | 85.294 | 136 | 17 | 1 | 1 | 133 | 1 | 136 | 7.42e-77 | 229 |
| Msa1328820 | MtrunA17_Chr2g0319151 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 2.69e-88 | 258 |
| Msa1328820 | MtrunA17_Chr2g0319151 | 85.294 | 136 | 17 | 1 | 1 | 133 | 1 | 136 | 7.42e-77 | 229 |
| Msa1328820 | MtrunA17_Chr2g0319131 | 86.301 | 146 | 10 | 1 | 118 | 253 | 1 | 146 | 1.45e-82 | 243 |
| Msa1328820 | MtrunA17_Chr2g0319131 | 77.397 | 146 | 20 | 2 | 1 | 133 | 1 | 146 | 8.13e-69 | 209 |
| Msa1328820 | MtrunA17_Chr2g0319121 | 85.294 | 136 | 18 | 2 | 118 | 252 | 1 | 135 | 8.06e-75 | 223 |
| Msa1328820 | MtrunA17_Chr2g0319121 | 83.193 | 119 | 18 | 2 | 1 | 118 | 1 | 118 | 3.12e-62 | 191 |
| Msa1328820 | MtrunA17_Chr7g0218961 | 83.036 | 112 | 19 | 0 | 142 | 253 | 2 | 113 | 5.68e-61 | 187 |
| Msa1328820 | MtrunA17_Chr7g0218961 | 82.979 | 94 | 16 | 0 | 25 | 118 | 2 | 95 | 3.11e-50 | 160 |
| Msa1328820 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 118 | 251 | 10 | 142 | 1.71e-54 | 172 |
| Msa1328820 | MtrunA17_Chr7g0222991 | 64.407 | 118 | 41 | 1 | 1 | 118 | 10 | 126 | 3.06e-43 | 143 |
| Msa1328820 | MtrunA17_Chr7g0223001 | 60.145 | 138 | 40 | 4 | 115 | 251 | 23 | 146 | 6.48e-43 | 143 |
| Msa1328820 | MtrunA17_Chr7g0223001 | 58.120 | 117 | 35 | 3 | 3 | 118 | 27 | 130 | 1.43e-32 | 116 |
| Msa1328820 | MtrunA17_Chr5g0407311 | 63.793 | 116 | 39 | 2 | 1 | 116 | 1 | 113 | 6.18e-41 | 136 |
| Msa1328820 | MtrunA17_Chr5g0407311 | 63.793 | 116 | 39 | 2 | 118 | 233 | 1 | 113 | 6.18e-41 | 136 |
| Msa1328820 | MtrunA17_Chr7g0240791 | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 6.30e-38 | 130 |
| Msa1328820 | MtrunA17_Chr7g0240791 | 96.970 | 66 | 2 | 0 | 118 | 183 | 1 | 66 | 6.30e-38 | 130 |
| Msa1328820 | MtrunA17_Chr8g0347231 | 56.122 | 98 | 42 | 1 | 154 | 250 | 28 | 125 | 1.06e-29 | 108 |
| Msa1328820 | MtrunA17_Chr8g0347231 | 51.020 | 98 | 44 | 2 | 37 | 130 | 28 | 125 | 8.55e-23 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328820 | AT4G40030.3 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40030.3 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40030.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40030.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40030.4 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40030.4 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT5G10980.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT5G10980.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40040.2 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40040.2 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40040.3 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40040.3 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40040.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1328820 | AT4G40040.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1328820 | AT4G40030.2 | 99.270 | 137 | 1 | 0 | 117 | 253 | 28 | 164 | 1.25e-94 | 275 |
| Msa1328820 | AT4G40030.2 | 90.441 | 136 | 10 | 1 | 1 | 133 | 29 | 164 | 8.82e-81 | 240 |
| Msa1328820 | AT1G09200.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1328820 | AT1G09200.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1328820 | AT5G65360.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1328820 | AT5G65360.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1328820 | AT5G10390.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1328820 | AT5G10390.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1328820 | AT5G10400.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1328820 | AT5G10400.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1328820 | AT3G27360.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1328820 | AT3G27360.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1328820 | AT1G75600.1 | 96.324 | 136 | 5 | 0 | 118 | 253 | 1 | 136 | 7.92e-91 | 264 |
| Msa1328820 | AT1G75600.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.05e-77 | 230 |
| Msa1328820 | AT1G13370.1 | 94.853 | 136 | 7 | 0 | 118 | 253 | 1 | 136 | 1.55e-89 | 261 |
| Msa1328820 | AT1G13370.1 | 89.231 | 130 | 11 | 1 | 1 | 127 | 1 | 130 | 3.30e-76 | 227 |
| Msa1328820 | AT5G65350.1 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 8.23e-87 | 254 |
| Msa1328820 | AT5G65350.1 | 83.824 | 136 | 19 | 1 | 1 | 133 | 1 | 136 | 6.90e-74 | 221 |
| Msa1328820 | AT1G19890.1 | 90.511 | 137 | 12 | 1 | 118 | 253 | 1 | 137 | 1.28e-83 | 246 |
| Msa1328820 | AT1G19890.1 | 81.752 | 137 | 21 | 2 | 1 | 133 | 1 | 137 | 1.17e-71 | 216 |
| Msa1328820 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 118 | 252 | 1 | 130 | 5.05e-64 | 196 |
| Msa1328820 | AT5G12910.1 | 63.704 | 135 | 41 | 3 | 1 | 132 | 1 | 130 | 2.13e-52 | 167 |
| Msa1328820 | AT1G01370.2 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1328820 | AT1G01370.2 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1328820 | AT1G01370.1 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1328820 | AT1G01370.1 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1328820 | AT1G01370.4 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1328820 | AT1G01370.4 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1328820 | AT1G01370.3 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1328820 | AT1G01370.3 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
Find 94 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCTTCTTCTTCTCTTC+AGG | 0.221581 | 8_4:+46842584 | None:intergenic |
| CCTAAGGAGGATGCTGCTTT+TGG | 0.276400 | 8_4:-46837440 | Msa1328820:exon |
| TGTGCATATTCGTTTGGAAT+TGG | 0.300321 | 8_4:-46837167 | Msa1328820:three_prime_UTR |
| AGCTTCTGTGCATATTCGTT+TGG | 0.325215 | 8_4:-46837173 | Msa1328820:three_prime_UTR |
| TTGGTTGCAAGTTGCTTCCT+TGG | 0.333909 | 8_4:+46838143 | None:intergenic |
| TTGGTTGCAAGTTGCTTCCT+AGG | 0.341167 | 8_4:+46841899 | None:intergenic |
| AACCGAAGAGCAACAGTTCC+TGG | 0.350308 | 8_4:+46837960 | None:intergenic |
| CCTTGCCAACTGGATGTCCT+TGG | 0.351370 | 8_4:+46837482 | None:intergenic |
| CACGGATCCTCCTTGCCAAC+TGG | 0.363910 | 8_4:+46837472 | None:intergenic |
| GTGCATATTCGTTTGGAATT+GGG | 0.369903 | 8_4:-46837166 | Msa1328820:three_prime_UTR |
| CACCGAAGAGCAACAGTTCC+GGG | 0.372127 | 8_4:+46841703 | None:intergenic |
| TCAAGAGCTCAGTACTCTTC+TGG | 0.372688 | 8_4:+46837783 | None:intergenic |
| GCTAGAAATACTAGATTAGA+TGG | 0.379840 | 8_4:+46837193 | None:intergenic |
| TAGCAAACAGTGCTTTAGAT+TGG | 0.403208 | 8_4:+46837099 | None:intergenic |
| TGAAATTGCTCAAGACTTCA+AGG | 0.405126 | 8_4:-46841453 | Msa1328820:intron |
| TCACCGAAGAGCAACAGTTC+CGG | 0.407614 | 8_4:+46841702 | None:intergenic |
| TAATTTGCTTGCAATGACTT+TGG | 0.419143 | 8_4:-46837288 | Msa1328820:three_prime_UTR |
| GAAGCTCCCCTTCCAGAGAT+TGG | 0.425530 | 8_4:-46837756 | Msa1328820:CDS |
| CTTGCCAACTGGATGTCCTT+GGG | 0.434839 | 8_4:+46837483 | None:intergenic |
| ATATCTTGTTGGTCTCTTTG+AGG | 0.438404 | 8_4:-46837550 | Msa1328820:CDS |
| TGAAATTGCTCAGGACTTCA+AGG | 0.441698 | 8_4:-46837729 | Msa1328820:intron |
| CTTCCTTGGTGCCTTTCCAC+CGG | 0.443477 | 8_4:+46838157 | None:intergenic |
| ATATCTTGTTGGTCTGTTTG+AGG | 0.444642 | 8_4:-46841272 | Msa1328820:CDS |
| CAATTTCACGAACCAATCTC+TGG | 0.444935 | 8_4:+46837744 | None:intergenic |
| TACTGGGCATGCAGCCACTC+TGG | 0.448287 | 8_4:-46837244 | Msa1328820:three_prime_UTR |
| TTCTTAACTCCACCAGTAGT+TGG | 0.449824 | 8_4:+46837999 | None:intergenic |
| GCCCAGGAACTGTTGCTCTT+CGG | 0.449916 | 8_4:-46837962 | Msa1328820:intron |
| GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8_4:-46837561 | Msa1328820:CDS |
| GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8_4:-46841283 | Msa1328820:CDS |
| GCCCCGGAACTGTTGCTCTT+CGG | 0.468662 | 8_4:-46841705 | Msa1328820:intron |
| TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8_4:-46837574 | Msa1328820:CDS |
| TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8_4:-46841296 | Msa1328820:CDS |
| AGAGTACTGAGCTCTTGATC+AGG | 0.482557 | 8_4:-46837778 | Msa1328820:CDS |
| AGAGTACTGAGCTCTTGATC+AGG | 0.482557 | 8_4:-46841502 | Msa1328820:CDS |
| CGTAAGTCTGCTCCCACTAC+TGG | 0.483075 | 8_4:-46841754 | Msa1328820:CDS |
| CAAACTGCTCGTAAGTCTAC+TGG | 0.493098 | 8_4:-46841932 | Msa1328820:CDS |
| CGTAAGTCTGCACCAACTAC+TGG | 0.494282 | 8_4:-46838011 | Msa1328820:CDS |
| ATCCGTGGTGAGCGCGCCTA+AGG | 0.494321 | 8_4:-46837456 | Msa1328820:exon |
| ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8_4:+46837592 | None:intergenic |
| ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8_4:+46841314 | None:intergenic |
| TTGAAATGATTTAGTTGCTA+GGG | 0.505269 | 8_4:-46837379 | Msa1328820:three_prime_UTR |
| CTAGATTAGATGGCAACAAA+AGG | 0.506318 | 8_4:+46837203 | None:intergenic |
| CAATTTCACGAACCAACCTC+TGG | 0.507537 | 8_4:+46841468 | None:intergenic |
| ATTGGTTCGTGAAATTGCTC+AGG | 0.513873 | 8_4:-46837738 | Msa1328820:CDS |
| TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8_4:-46837583 | Msa1328820:CDS |
| TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8_4:-46841305 | Msa1328820:CDS |
| CAAACTGCTCGTAAGTCAAC+CGG | 0.517209 | 8_4:-46838176 | Msa1328820:CDS |
| TGACTTACGAGCAGTTTGCT+TGG | 0.520852 | 8_4:+46838181 | None:intergenic |
| TTTGGTGCTGTTTAGATGGG+TGG | 0.522117 | 8_4:-46837422 | Msa1328820:three_prime_UTR |
| GAAGCTCCCCTTCCAGAGGT+TGG | 0.527763 | 8_4:-46841480 | Msa1328820:CDS |
| ATTGAAATGATTTAGTTGCT+AGG | 0.528912 | 8_4:-46837380 | Msa1328820:three_prime_UTR |
| AGACTTACGAGCAGTTTGCT+TGG | 0.530724 | 8_4:+46841937 | None:intergenic |
| ATTCGTAGTTTGATTAATTG+CGG | 0.539470 | 8_4:-46837347 | Msa1328820:three_prime_UTR |
| TTTCTTAACTCCACCAGTAG+TGG | 0.546326 | 8_4:+46841741 | None:intergenic |
| CCAAAAGCAGCATCCTCCTT+AGG | 0.547324 | 8_4:+46837440 | None:intergenic |
| TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8_4:+46837508 | None:intergenic |
| TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8_4:+46841230 | None:intergenic |
| CTCCTTAGGCGCGCTCACCA+CGG | 0.549887 | 8_4:+46837454 | None:intergenic |
| CACGAACCAATCTCTGGAAG+GGG | 0.550172 | 8_4:+46837750 | None:intergenic |
| CACGAACCAACCTCTGGAAG+GGG | 0.550311 | 8_4:+46841474 | None:intergenic |
| TTCTTAACTCCACCAGTAGT+GGG | 0.561000 | 8_4:+46841742 | None:intergenic |
| ACCGAAGAGCAACAGTTCCT+GGG | 0.564699 | 8_4:+46837961 | None:intergenic |
| CGTGGTGAGCGCGCCTAAGG+AGG | 0.568469 | 8_4:-46837453 | Msa1328820:exon |
| TCGTAAGTCAACCGGTGGAA+AGG | 0.572235 | 8_4:-46838168 | Msa1328820:CDS |
| GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8_4:+46837503 | None:intergenic |
| GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8_4:+46841225 | None:intergenic |
| AAGGAAGCAACTTGCAACCA+AGG | 0.574800 | 8_4:-46838141 | Msa1328820:intron |
| AAACCACATCGTTACCGCCC+CGG | 0.580189 | 8_4:-46841721 | Msa1328820:CDS |
| TCACGAACCAATCTCTGGAA+GGG | 0.584671 | 8_4:+46837749 | None:intergenic |
| TCACGAACCAACCTCTGGAA+GGG | 0.587957 | 8_4:+46841473 | None:intergenic |
| CCAAGGACATCCAGTTGGCA+AGG | 0.588868 | 8_4:-46837482 | Msa1328820:CDS |
| TTCACGAACCAACCTCTGGA+AGG | 0.592307 | 8_4:+46841472 | None:intergenic |
| TTCACGAACCAATCTCTGGA+AGG | 0.596494 | 8_4:+46837748 | None:intergenic |
| TCGTAAGTCTACTGGTGGAA+AGG | 0.600087 | 8_4:-46841924 | Msa1328820:CDS |
| AAGTCTGCTCCCACTACTGG+TGG | 0.603052 | 8_4:-46841751 | Msa1328820:CDS |
| AAACCACATCGTTATCGCCC+AGG | 0.603518 | 8_4:-46837978 | Msa1328820:CDS |
| TAGGAAGCAACTTGCAACCA+AGG | 0.610266 | 8_4:-46841897 | Msa1328820:intron |
| AAGTCTGCACCAACTACTGG+TGG | 0.611115 | 8_4:-46838008 | Msa1328820:CDS |
| GCGAGTTACTATTATGCCCA+AGG | 0.629580 | 8_4:-46837499 | Msa1328820:CDS |
| TCAGGAAGCTCCCCTTCCAG+AGG | 0.635098 | 8_4:-46841484 | Msa1328820:CDS |
| CTACTGGTGGAAAGGCACCT+AGG | 0.637308 | 8_4:-46841916 | Msa1328820:CDS |
| GTTCCGGGGCGGTAACGATG+TGG | 0.646981 | 8_4:+46841718 | None:intergenic |
| ACCGAAGAGCAACAGTTCCG+GGG | 0.653413 | 8_4:+46841704 | None:intergenic |
| TATGCCCAAGGACATCCAGT+TGG | 0.656475 | 8_4:-46837487 | Msa1328820:CDS |
| ACTGCTCGTAAGTCTACTGG+TGG | 0.660657 | 8_4:-46841929 | Msa1328820:CDS |
| GTTCCTGGGCGATAACGATG+TGG | 0.663160 | 8_4:+46837975 | None:intergenic |
| CAGTTGGCAAGGAGGATCCG+TGG | 0.664833 | 8_4:-46837471 | Msa1328820:CDS |
| CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8_4:+46837601 | None:intergenic |
| CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8_4:+46841323 | None:intergenic |
| AGGACATCCAGTTGGCAAGG+AGG | 0.674393 | 8_4:-46837479 | Msa1328820:CDS |
| ACTGCTCGTAAGTCAACCGG+TGG | 0.674713 | 8_4:-46838173 | Msa1328820:CDS |
| CCACAAAATATAATCCAGAG+TGG | 0.681606 | 8_4:+46837230 | None:intergenic |
| CAACCGGTGGAAAGGCACCA+AGG | 0.683753 | 8_4:-46838160 | Msa1328820:CDS |
| GAAGAGCAACAGTTCCGGGG+CGG | 0.724004 | 8_4:+46841707 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAAAAAAAAAACG+GGG | + | chr8_4:46838962-46838981 | None:intergenic | 10.0% |
| !! | GAAATTAAAAAAAAAAAAAC+GGG | + | chr8_4:46838963-46838982 | None:intergenic | 10.0% |
| !! | GGAAATTAAAAAAAAAAAAA+CGG | + | chr8_4:46838964-46838983 | None:intergenic | 10.0% |
| !!! | TTCTTTTCTTCAAATTTTTT+AGG | - | chr8_4:46837173-46837192 | Msa1328820:three_prime_UTR | 15.0% |
| !!! | TTCAAATTTTTTAGGAAATT+AGG | - | chr8_4:46837181-46837200 | Msa1328820:three_prime_UTR | 15.0% |
| !!! | TCAAATTTTTTAGGAAATTA+GGG | - | chr8_4:46837182-46837201 | Msa1328820:three_prime_UTR | 15.0% |
| !! | TTTCTTCAATTTATGAAATT+AGG | - | chr8_4:46837279-46837298 | Msa1328820:three_prime_UTR | 15.0% |
| !! | TTCTTCAATTTATGAAATTA+GGG | - | chr8_4:46837280-46837299 | Msa1328820:three_prime_UTR | 15.0% |
| !! | CTATCAATTAAAATTATGAT+AGG | - | chr8_4:46837583-46837602 | Msa1328820:CDS | 15.0% |
| !! | AATTAAAAAAAAAAAAACGG+GGG | + | chr8_4:46838961-46838980 | None:intergenic | 15.0% |
| !!! | ATGTTTTCGTAATATTTAAA+TGG | - | chr8_4:46839114-46839133 | Msa1328820:intron | 15.0% |
| !!! | TGTTTTCGTAATATTTAAAT+GGG | - | chr8_4:46839115-46839134 | Msa1328820:intron | 15.0% |
| !! | TTCAAATCTATAGTAAATTA+GGG | - | chr8_4:46841005-46841024 | Msa1328820:intron | 15.0% |
| !!! | ATTATGTTGCATTTTATATT+AGG | - | chr8_4:46841193-46841212 | Msa1328820:intron | 15.0% |
| !!! | TCTGTTAAAAAATTTCTTTT+AGG | - | chr8_4:46841772-46841791 | Msa1328820:intron | 15.0% |
| !!! | CTGTTAAAAAATTTCTTTTA+GGG | - | chr8_4:46841773-46841792 | Msa1328820:intron | 15.0% |
| !! | TATCAATTTGAATTGTTCTT+AGG | - | chr8_4:46837240-46837259 | Msa1328820:three_prime_UTR | 20.0% |
| !! | TATTGTTCAATTATGTCTTT+AGG | - | chr8_4:46837348-46837367 | Msa1328820:three_prime_UTR | 20.0% |
| !!! | TGTTCAATTATTTCTAGTTT+AGG | - | chr8_4:46837451-46837470 | Msa1328820:exon | 20.0% |
| !! | TTATTGTGATTGTTAGTTAA+TGG | - | chr8_4:46837615-46837634 | Msa1328820:intron | 20.0% |
| !!! | ATTGATTGTTATTTGCATTA+TGG | - | chr8_4:46837875-46837894 | Msa1328820:intron | 20.0% |
| !!! | TTCTGTTGAAATTTTCTTTA+AGG | - | chr8_4:46838028-46838047 | Msa1328820:intron | 20.0% |
| !! | TTAATATGAAGTGATTGTAT+TGG | - | chr8_4:46838073-46838092 | Msa1328820:intron | 20.0% |
| !! | TAATATGAAGTGATTGTATT+GGG | - | chr8_4:46838074-46838093 | Msa1328820:intron | 20.0% |
| !!! | TGGAAATGATTTAGTTTTAT+AGG | - | chr8_4:46838605-46838624 | Msa1328820:intron | 20.0% |
| !!! | GGAAATGATTTAGTTTTATA+GGG | - | chr8_4:46838606-46838625 | Msa1328820:intron | 20.0% |
| !!! | CTATCTGAATTTTAGTTTTT+GGG | - | chr8_4:46838681-46838700 | Msa1328820:intron | 20.0% |
| !!! | TATATGTTTCTCGTTTATTT+TGG | - | chr8_4:46838736-46838755 | Msa1328820:intron | 20.0% |
| !!! | ATATGTTTCTCGTTTATTTT+GGG | - | chr8_4:46838737-46838756 | Msa1328820:intron | 20.0% |
| !!! | TAACTTGCATACAAATTTTT+TGG | + | chr8_4:46839541-46839560 | None:intergenic | 20.0% |
| !! | TAATCTTATTAGATCCATAA+TGG | - | chr8_4:46839716-46839735 | Msa1328820:intron | 20.0% |
| !! | TAATTATGAAAAATGCATAG+AGG | - | chr8_4:46839825-46839844 | Msa1328820:intron | 20.0% |
| !! | TCGTTGACAAAATATATTAT+TGG | + | chr8_4:46839927-46839946 | None:intergenic | 20.0% |
| !! | AAATAACTTCATTATCAGAA+GGG | + | chr8_4:46840162-46840181 | None:intergenic | 20.0% |
| !! | TTAGTTTCTATTCAATTGTT+AGG | + | chr8_4:46840529-46840548 | None:intergenic | 20.0% |
| !! | TAAATTGAATGAACTATGAA+AGG | - | chr8_4:46840700-46840719 | Msa1328820:intron | 20.0% |
| !!! | ATTTTCTAGAAACACTATAA+CGG | - | chr8_4:46840725-46840744 | Msa1328820:intron | 20.0% |
| !!! | TACGTATTGTTTCTATTAAT+GGG | + | chr8_4:46840794-46840813 | None:intergenic | 20.0% |
| !!! | ATATGAAACTTTGATTTGAA+AGG | + | chr8_4:46840911-46840930 | None:intergenic | 20.0% |
| !! | AGAAAAAAGCAAAAATTTCA+AGG | - | chr8_4:46840970-46840989 | Msa1328820:intron | 20.0% |
| !! | CTTCAAATCTATAGTAAATT+AGG | - | chr8_4:46841004-46841023 | Msa1328820:intron | 20.0% |
| !! | AATAAACATTCGAATTAGAA+AGG | + | chr8_4:46841176-46841195 | None:intergenic | 20.0% |
| !!! | CTTTTATCAAAATTTGTTTC+TGG | - | chr8_4:46841241-46841260 | Msa1328820:CDS | 20.0% |
| !!! | TCATGTTTGAATTTTGATTA+AGG | - | chr8_4:46841274-46841293 | Msa1328820:CDS | 20.0% |
| !!! | AATAAGATAAATTAGCCTAA+CGG | + | chr8_4:46841379-46841398 | None:intergenic | 20.0% |
| !!! | GGCTAATTTATCTTATTTTT+AGG | - | chr8_4:46841382-46841401 | Msa1328820:intron | 20.0% |
| !! | ATTGTTAATTGTTGAAGATT+AGG | - | chr8_4:46841422-46841441 | Msa1328820:intron | 20.0% |
| !!! | AAGATTAGGTTTTAGTTATT+AGG | - | chr8_4:46841436-46841455 | Msa1328820:intron | 20.0% |
| !!! | TTAGGTTAAACAATGATTTT+AGG | - | chr8_4:46841454-46841473 | Msa1328820:CDS | 20.0% |
| !!! | TAGGTTAAACAATGATTTTA+GGG | - | chr8_4:46841455-46841474 | Msa1328820:CDS | 20.0% |
| !!! | GTTTATAATGATTTGTCATT+TGG | - | chr8_4:46841866-46841885 | Msa1328820:intron | 20.0% |
| !!! | TATTTTAAAACAGTGAGATT+AGG | - | chr8_4:46841894-46841913 | Msa1328820:intron | 20.0% |
| !!! | TATTCTGCTATTTTAGTTTT+TGG | - | chr8_4:46842390-46842409 | Msa1328820:intron | 20.0% |
| !!! | ATTCTGCTATTTTAGTTTTT+GGG | - | chr8_4:46842391-46842410 | Msa1328820:intron | 20.0% |
| !!! | TTATATGTTCTTGTTTTACT+GGG | - | chr8_4:46842445-46842464 | Msa1328820:intron | 20.0% |
| ! | AATTGAACAATAGCATAAAC+TGG | + | chr8_4:46837440-46837459 | None:intergenic | 25.0% |
| ! | ATTGTTAGTTAATGGAGATT+AGG | - | chr8_4:46837623-46837642 | Msa1328820:intron | 25.0% |
| ! | TTAGGATAAGCAATGAATTT+AGG | - | chr8_4:46837641-46837660 | Msa1328820:intron | 25.0% |
| !! | AACAAATGTTCTGATTTTAG+AGG | - | chr8_4:46837665-46837684 | Msa1328820:intron | 25.0% |
| !! | GAATGTTTGGTTAATTGTTT+TGG | - | chr8_4:46837903-46837922 | Msa1328820:intron | 25.0% |
| !! | TTTGTTTGAAGTAATTGTGT+TGG | - | chr8_4:46838119-46838138 | Msa1328820:intron | 25.0% |
| !! | TTGTTTGAAGTAATTGTGTT+GGG | - | chr8_4:46838120-46838139 | Msa1328820:intron | 25.0% |
| !!! | TTGTTTTAAACAGTGAGATT+AGG | - | chr8_4:46838170-46838189 | Msa1328820:CDS | 25.0% |
| !!! | TTGGTTGTTTCTGATAATTT+TGG | - | chr8_4:46838339-46838358 | Msa1328820:intron | 25.0% |
| ! | TTAATCAAACTACGAATGAA+CGG | + | chr8_4:46838639-46838658 | None:intergenic | 25.0% |
| ! | ATTCGTAGTTTGATTAATTG+TGG | - | chr8_4:46838642-46838661 | Msa1328820:intron | 25.0% |
| !!! | GCTATCTGAATTTTAGTTTT+TGG | - | chr8_4:46838680-46838699 | Msa1328820:intron | 25.0% |
| ! | TTACCCTTTATCAATTATTG+AGG | - | chr8_4:46839350-46839369 | Msa1328820:intron | 25.0% |
| ! | TACCCTTTATCAATTATTGA+GGG | - | chr8_4:46839351-46839370 | Msa1328820:intron | 25.0% |
| ! | AACCCTCAATAATTGATAAA+GGG | + | chr8_4:46839356-46839375 | None:intergenic | 25.0% |
| ! | AAACCCTCAATAATTGATAA+AGG | + | chr8_4:46839357-46839376 | None:intergenic | 25.0% |
| ! | TATGCAAGTTATGTTATGAT+TGG | - | chr8_4:46839550-46839569 | Msa1328820:intron | 25.0% |
| !! | TATTTTCCTTGTCAACAAAT+TGG | + | chr8_4:46839670-46839689 | None:intergenic | 25.0% |
| ! | GGATCTAATAAGATTAATCA+TGG | + | chr8_4:46839712-46839731 | None:intergenic | 25.0% |
| ! | GACAATAAACATATCCATTA+TGG | + | chr8_4:46839733-46839752 | None:intergenic | 25.0% |
| !!! | TACATGATTTTGCTATAAAC+AGG | + | chr8_4:46840012-46840031 | None:intergenic | 25.0% |
| ! | GTTTATAGCAAAATCATGTA+TGG | - | chr8_4:46840012-46840031 | Msa1328820:intron | 25.0% |
| ! | CATAAAGAGTTTCAATTCAA+AGG | + | chr8_4:46840087-46840106 | None:intergenic | 25.0% |
| ! | CTTTGAATTGAAACTCTTTA+TGG | - | chr8_4:46840085-46840104 | Msa1328820:intron | 25.0% |
| ! | CAAATAACTTCATTATCAGA+AGG | + | chr8_4:46840163-46840182 | None:intergenic | 25.0% |
| !! | ACAATTTTGCCGTAAAAATA+AGG | - | chr8_4:46840246-46840265 | Msa1328820:intron | 25.0% |
| !!! | TTGTAGCTTCCTTATTTTTA+CGG | + | chr8_4:46840258-46840277 | None:intergenic | 25.0% |
| ! | CAAAAAAAAAAAATGAACGC+AGG | - | chr8_4:46840312-46840331 | Msa1328820:intron | 25.0% |
| ! | TTTAACGTGACATTTACATT+TGG | + | chr8_4:46840446-46840465 | None:intergenic | 25.0% |
| !!! | AAGAGCATTTGAAATTTACT+TGG | + | chr8_4:46840499-46840518 | None:intergenic | 25.0% |
| ! | AAATTTCAAATGCTCTTTGT+TGG | - | chr8_4:46840502-46840521 | Msa1328820:intron | 25.0% |
| ! | TATGTGAATGATTTATCGTA+TGG | - | chr8_4:46840672-46840691 | Msa1328820:intron | 25.0% |
| ! | ATGTGAATGATTTATCGTAT+GGG | - | chr8_4:46840673-46840692 | Msa1328820:intron | 25.0% |
| !!! | ACGTATTGTTTCTATTAATG+GGG | + | chr8_4:46840793-46840812 | None:intergenic | 25.0% |
| !!! | GTACGTATTGTTTCTATTAA+TGG | + | chr8_4:46840795-46840814 | None:intergenic | 25.0% |
| ! | ATTCTCCAATTTACGAAATT+AGG | - | chr8_4:46841108-46841127 | Msa1328820:intron | 25.0% |
| ! | TTCTCCAATTTACGAAATTA+GGG | - | chr8_4:46841109-46841128 | Msa1328820:intron | 25.0% |
| ! | TAAACCCTAATTTCGTAAAT+TGG | + | chr8_4:46841116-46841135 | None:intergenic | 25.0% |
| !! | AGGTTAAACAATGATTTTAG+GGG | - | chr8_4:46841456-46841475 | Msa1328820:CDS | 25.0% |
| ! | ATTGTTCTGATTATCTTGTT+TGG | - | chr8_4:46841481-46841500 | Msa1328820:CDS | 25.0% |
| ! | AATCAACTAAAATCAAACCT+TGG | + | chr8_4:46841584-46841603 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTCTCTTAACTTT+AGG | - | chr8_4:46841666-46841685 | Msa1328820:intron | 25.0% |
| !!! | TTGTTTCAATTGAGTTGAAT+TGG | - | chr8_4:46841839-46841858 | Msa1328820:intron | 25.0% |
| !! | TAATGATTTGTCATTTGGAT+TGG | - | chr8_4:46841871-46841890 | Msa1328820:intron | 25.0% |
| !! | GTTGTGGTTTCTAATAATTT+TGG | - | chr8_4:46842064-46842083 | Msa1328820:intron | 25.0% |
| ! | ATTGAAATGATTTAGTTGCT+AGG | - | chr8_4:46842325-46842344 | Msa1328820:intron | 25.0% |
| ! | TTGAAATGATTTAGTTGCTA+GGG | - | chr8_4:46842326-46842345 | Msa1328820:intron | 25.0% |
| ! | ATTCGTAGTTTGATTAATTG+CGG | - | chr8_4:46838642-46838661 | Msa1328820:intron | 25.0% |
| !!! | GTTATATGTTCTTGTTTTAC+TGG | - | chr8_4:46842444-46842463 | Msa1328820:intron | 25.0% |
| AGAAGAAAGCAAAAATTTCC+AGG | - | chr8_4:46837134-46837153 | Msa1328820:three_prime_UTR | 30.0% | |
| AAAAGAAAAGAAAACGAACC+TGG | + | chr8_4:46837155-46837174 | None:intergenic | 30.0% | |
| TTGATACGAAAAACAAAGCT+CGG | + | chr8_4:46837226-46837245 | None:intergenic | 30.0% | |
| GAAATTAGGGTTTACGAATT+TGG | - | chr8_4:46837293-46837312 | Msa1328820:three_prime_UTR | 30.0% | |
| CTTGTATTCATCCATGTTAT+AGG | - | chr8_4:46837552-46837571 | Msa1328820:CDS | 30.0% | |
| TAGTTCTCTTTCCTATAACA+TGG | + | chr8_4:46837566-46837585 | None:intergenic | 30.0% | |
| GTTGATTGTGTTTATGTAGA+TGG | - | chr8_4:46837739-46837758 | Msa1328820:CDS | 30.0% | |
| CATTATGGTGATTGAATGTT+TGG | - | chr8_4:46837890-46837909 | Msa1328820:intron | 30.0% | |
| ATCAGTTTAGATGACAGATT+TGG | - | chr8_4:46838320-46838339 | Msa1328820:intron | 30.0% | |
| !! | TGCTGATAGTGTTTTGTTAT+TGG | - | chr8_4:46838585-46838604 | Msa1328820:intron | 30.0% |
| GTTTGATTAATTGTGGTGAT+AGG | - | chr8_4:46838649-46838668 | Msa1328820:intron | 30.0% | |
| !! | TAATTTGCTTGCAATGACTT+TGG | - | chr8_4:46838707-46838726 | Msa1328820:intron | 30.0% |
| TTTATATTCTGTCGAGAGTT+CGG | + | chr8_4:46839022-46839041 | None:intergenic | 30.0% | |
| ATAGCATAGCATAATAGACA+CGG | + | chr8_4:46839286-46839305 | None:intergenic | 30.0% | |
| CCAAATGAAACATCCATTAA+AGG | + | chr8_4:46839416-46839435 | None:intergenic | 30.0% | |
| ! | CCTTTAATGGATGTTTCATT+TGG | - | chr8_4:46839413-46839432 | Msa1328820:intron | 30.0% |
| ATGTATAATGTACTCAACTC+TGG | - | chr8_4:46839447-46839466 | Msa1328820:intron | 30.0% | |
| TGTATAATGTACTCAACTCT+GGG | - | chr8_4:46839448-46839467 | Msa1328820:intron | 30.0% | |
| TAATCATGGAGTTCAATTGT+TGG | + | chr8_4:46839698-46839717 | None:intergenic | 30.0% | |
| CATAGAGGTGATAAGAAAAA+TGG | - | chr8_4:46839840-46839859 | Msa1328820:intron | 30.0% | |
| !! | TTTTGCTATAAACAGGTGAT+TGG | + | chr8_4:46840005-46840024 | None:intergenic | 30.0% |
| AAGGGCAAACATGTAAAATA+AGG | + | chr8_4:46840063-46840082 | None:intergenic | 30.0% | |
| ! | TGAAACTCTTTATGGCTTTT+AGG | - | chr8_4:46840093-46840112 | Msa1328820:intron | 30.0% |
| TGAATGATTTATGCATTGTG+TGG | - | chr8_4:46840189-46840208 | Msa1328820:intron | 30.0% | |
| ! | TTTTACGGCAAAATTGTGTA+AGG | + | chr8_4:46840243-46840262 | None:intergenic | 30.0% |
| TACACACATACTTAGATACT+TGG | - | chr8_4:46840360-46840379 | Msa1328820:intron | 30.0% | |
| ! | CGTGGACATTTTAAATAATG+TGG | + | chr8_4:46840587-46840606 | None:intergenic | 30.0% |
| ATGTCTAATAAGAACCATGT+GGG | - | chr8_4:46840633-46840652 | Msa1328820:intron | 30.0% | |
| AACCCAAAAATCGTTGTTTA+TGG | - | chr8_4:46840751-46840770 | Msa1328820:intron | 30.0% | |
| ! | GACCATAAACAACGATTTTT+GGG | + | chr8_4:46840756-46840775 | None:intergenic | 30.0% |
| ! | AGACCATAAACAACGATTTT+TGG | + | chr8_4:46840757-46840776 | None:intergenic | 30.0% |
| !! | CGTATTGTTTCTATTAATGG+GGG | + | chr8_4:46840792-46840811 | None:intergenic | 30.0% |
| GAAATTAGGGTTTACGAATT+CGG | - | chr8_4:46837293-46837312 | Msa1328820:three_prime_UTR | 30.0% | |
| GTTCACAATCAGTTTAGTTA+AGG | - | chr8_4:46842042-46842061 | Msa1328820:intron | 30.0% | |
| AATCAGTTTAGTTAAGGTTG+TGG | - | chr8_4:46842048-46842067 | Msa1328820:intron | 30.0% | |
| !! | TAATTTGCTTGCAATGACTT+TGG | - | chr8_4:46838707-46838726 | Msa1328820:intron | 30.0% |
| GCTAGAAATACTAGATTAGA+TGG | + | chr8_4:46838804-46838823 | None:intergenic | 30.0% | |
| TTAGGTTTCGATAATTCACG+TGG | - | chr8_4:46837366-46837385 | Msa1328820:three_prime_UTR | 35.0% | |
| !!! | TCGTTGATCTTGTGTTGTTT+TGG | - | chr8_4:46837526-46837545 | Msa1328820:CDS | 35.0% |
| GATGATTCAAAAACTCACCT+TGG | + | chr8_4:46837828-46837847 | None:intergenic | 35.0% | |
| !! | TGGTTGTTTCTGTTTCCTTT+AGG | - | chr8_4:46837923-46837942 | Msa1328820:intron | 35.0% |
| TGAAATTGCTCAAGACTTCA+AGG | - | chr8_4:46838252-46838271 | Msa1328820:intron | 35.0% | |
| ! | ATATCTTGTTGGTCTGTTTG+AGG | - | chr8_4:46838433-46838452 | Msa1328820:intron | 35.0% |
| AGTTGTCCATTACAATCCAA+AGG | + | chr8_4:46838773-46838792 | None:intergenic | 35.0% | |
| ! | AGCTACTTTCTTAAAACACG+CGG | - | chr8_4:46838853-46838872 | Msa1328820:intron | 35.0% |
| !! | AATTTCGCTTTAGAAACACG+CGG | - | chr8_4:46838920-46838939 | Msa1328820:intron | 35.0% |
| GTAGAACGAAAAGAAGGAAT+TGG | + | chr8_4:46838985-46839004 | None:intergenic | 35.0% | |
| ! | TCCTTCTTTTCGTTCTACTT+AGG | - | chr8_4:46838987-46839006 | Msa1328820:intron | 35.0% |
| ACCTAAGTAGAACGAAAAGA+AGG | + | chr8_4:46838991-46839010 | None:intergenic | 35.0% | |
| GTGTTTAATCCCAATTGAGA+CGG | + | chr8_4:46839204-46839223 | None:intergenic | 35.0% | |
| TAGCATAATAGACACGGAAT+GGG | + | chr8_4:46839280-46839299 | None:intergenic | 35.0% | |
| ATAGCATAATAGACACGGAA+TGG | + | chr8_4:46839281-46839300 | None:intergenic | 35.0% | |
| TCTTACTATGCATTCTCCAT+GGG | + | chr8_4:46839598-46839617 | None:intergenic | 35.0% | |
| TTCTTACTATGCATTCTCCA+TGG | + | chr8_4:46839599-46839618 | None:intergenic | 35.0% | |
| !! | ACTCTCTGAATTTGAGTTGA+AGG | - | chr8_4:46839624-46839643 | Msa1328820:intron | 35.0% |
| AACAAATTGGCACATCCAAT+CGG | + | chr8_4:46839657-46839676 | None:intergenic | 35.0% | |
| GAGTTTCAATTCAAAGGCAA+GGG | + | chr8_4:46840081-46840100 | None:intergenic | 35.0% | |
| AGAGTTTCAATTCAAAGGCA+AGG | + | chr8_4:46840082-46840101 | None:intergenic | 35.0% | |
| TGTAAGAGAAGTTTAGGAGT+TGG | + | chr8_4:46840139-46840158 | None:intergenic | 35.0% | |
| CGAAAAGGTGACATGTTTAA+TGG | + | chr8_4:46840390-46840409 | None:intergenic | 35.0% | |
| AATTGCACACTCGAAAACAA+AGG | + | chr8_4:46840475-46840494 | None:intergenic | 35.0% | |
| TCAAATCAACACATACATCG+TGG | + | chr8_4:46840605-46840624 | None:intergenic | 35.0% | |
| CATGTCTAATAAGAACCATG+TGG | - | chr8_4:46840632-46840651 | Msa1328820:intron | 35.0% | |
| CTTTCTCAGTTACGATCTAA+CGG | + | chr8_4:46840817-46840836 | None:intergenic | 35.0% | |
| !! | CTTTGATTTGAAAGGCGAAA+AGG | + | chr8_4:46840903-46840922 | None:intergenic | 35.0% |
| GAAACTCGTTAGCTGAAATT+TGG | + | chr8_4:46840942-46840961 | None:intergenic | 35.0% | |
| ! | GTTTATAGCTTCTGTGCTTT+TGG | - | chr8_4:46841027-46841046 | Msa1328820:intron | 35.0% |
| ! | GTTACATTCATCCACGTTTT+AGG | - | chr8_4:46841330-46841349 | Msa1328820:CDS | 35.0% |
| TTCTTCTCTTTCCTAAAACG+TGG | + | chr8_4:46841344-46841363 | None:intergenic | 35.0% | |
| CTTGTTTGGATTTACGTAGA+TGG | - | chr8_4:46841495-46841514 | Msa1328820:CDS | 35.0% | |
| !! | TCAATTGAGTTGAATTGGCT+TGG | - | chr8_4:46841844-46841863 | Msa1328820:intron | 35.0% |
| ! | ATATCTTGTTGGTCTCTTTG+AGG | - | chr8_4:46842155-46842174 | Msa1328820:intron | 35.0% |
| CCACAAAATATAATCCAGAG+TGG | + | chr8_4:46842478-46842497 | None:intergenic | 35.0% | |
| ! | CCACTCTGGATTATATTTTG+TGG | - | chr8_4:46842475-46842494 | Msa1328820:intron | 35.0% |
| CTAGATTAGATGGCAACAAA+AGG | + | chr8_4:46842505-46842524 | None:intergenic | 35.0% | |
| ! | TGTGCATATTCGTTTGGAAT+TGG | - | chr8_4:46842538-46842557 | Msa1328820:intron | 35.0% |
| ! | GTGCATATTCGTTTGGAATT+GGG | - | chr8_4:46842539-46842558 | Msa1328820:intron | 35.0% |
| ! | TAGCAAACAGTGCTTTAGAT+TGG | + | chr8_4:46842609-46842628 | None:intergenic | 35.0% |
| GCTTTCTTCTTCTTCTCTTC+AGG | + | chr8_4:46837124-46837143 | None:intergenic | 40.0% | |
| TTCTTAACTCCACCAGTAGT+GGG | + | chr8_4:46837966-46837985 | None:intergenic | 40.0% | |
| TTTCTTAACTCCACCAGTAG+TGG | + | chr8_4:46837967-46837986 | None:intergenic | 40.0% | |
| TAATAGTAACTCGCTTGGCA+TGG | + | chr8_4:46838478-46838497 | None:intergenic | 40.0% | |
| CATCTAAACAGCACCAAACA+CGG | + | chr8_4:46838559-46838578 | None:intergenic | 40.0% | |
| !! | GTGTTTGGTGCTGTTTAGAT+GGG | - | chr8_4:46838558-46838577 | Msa1328820:intron | 40.0% |
| TGTCCATTACAATCCAAAGG+TGG | + | chr8_4:46838770-46838789 | None:intergenic | 40.0% | |
| !! | AAAAAGGGTACCGTCTCAAT+TGG | - | chr8_4:46839191-46839210 | Msa1328820:intron | 40.0% |
| !! | AAAAGGGTACCGTCTCAATT+GGG | - | chr8_4:46839192-46839211 | Msa1328820:intron | 40.0% |
| TAGGTACATGCAGCCTTTAA+TGG | - | chr8_4:46839400-46839419 | Msa1328820:intron | 40.0% | |
| AACACATTTGTAGCTTCCCA+TGG | - | chr8_4:46839579-46839598 | Msa1328820:intron | 40.0% | |
| !! | GATGTGCCAATTTGTTGACA+AGG | - | chr8_4:46839661-46839680 | Msa1328820:intron | 40.0% |
| AATGCAAGAAACGTGCAAAG+TGG | - | chr8_4:46839769-46839788 | Msa1328820:intron | 40.0% | |
| ! | GAAGGGTGTAAGAGAAGTTT+AGG | + | chr8_4:46840145-46840164 | None:intergenic | 40.0% |
| ! | ATCGTAACTGAGAAAGCACA+CGG | - | chr8_4:46840821-46840840 | Msa1328820:intron | 40.0% |
| GGCGTATATATATAGCGTGT+CGG | + | chr8_4:46840876-46840895 | None:intergenic | 40.0% | |
| TTTGAAAGGCGAAAAGGTGA+AGG | + | chr8_4:46840897-46840916 | None:intergenic | 40.0% | |
| ACGAATTCGGTAGATGTGTT+TGG | - | chr8_4:46841135-46841154 | Msa1328820:intron | 40.0% | |
| TTCTTAACTCCACCAGTAGT+TGG | + | chr8_4:46837966-46837985 | None:intergenic | 40.0% | |
| CAATTTCACGAACCAATCTC+TGG | + | chr8_4:46841964-46841983 | None:intergenic | 40.0% | |
| !! | ATTGGTTCGTGAAATTGCTC+AGG | - | chr8_4:46841967-46841986 | Msa1328820:intron | 40.0% |
| TGAAATTGCTCAGGACTTCA+AGG | - | chr8_4:46841976-46841995 | Msa1328820:intron | 40.0% | |
| TAATAGTAACTCGCTTGGCA+TGG | + | chr8_4:46838478-46838497 | None:intergenic | 40.0% | |
| !!! | TGCTTTTGGTGCTGTTTAGA+TGG | - | chr8_4:46842279-46842298 | Msa1328820:intron | 40.0% |
| !!! | GCTTTTGGTGCTGTTTAGAT+GGG | - | chr8_4:46842280-46842299 | Msa1328820:intron | 40.0% |
| AGCTTCTGTGCATATTCGTT+TGG | - | chr8_4:46842532-46842551 | Msa1328820:intron | 40.0% | |
| ! | AGACTTACGAGCAGTTTGCT+TGG | + | chr8_4:46837771-46837790 | None:intergenic | 45.0% |
| CAAACTGCTCGTAAGTCTAC+TGG | - | chr8_4:46837773-46837792 | Msa1328820:CDS | 45.0% | |
| TCGTAAGTCTACTGGTGGAA+AGG | - | chr8_4:46837781-46837800 | Msa1328820:CDS | 45.0% | |
| TTGGTTGCAAGTTGCTTCCT+AGG | + | chr8_4:46837809-46837828 | None:intergenic | 45.0% | |
| TAGGAAGCAACTTGCAACCA+AGG | - | chr8_4:46837808-46837827 | Msa1328820:intron | 45.0% | |
| !! | AGAGTACTGAGCTCTTGATC+AGG | - | chr8_4:46838203-46838222 | Msa1328820:intron | 45.0% |
| CAATTTCACGAACCAACCTC+TGG | + | chr8_4:46838240-46838259 | None:intergenic | 45.0% | |
| GGGCATAATAGTAACTCGCT+TGG | + | chr8_4:46838483-46838502 | None:intergenic | 45.0% | |
| GCGAGTTACTATTATGCCCA+AGG | - | chr8_4:46838484-46838503 | Msa1328820:intron | 45.0% | |
| !! | CGTGTTTGGTGCTGTTTAGA+TGG | - | chr8_4:46838557-46838576 | Msa1328820:intron | 45.0% |
| !! | TTTGGTGCTGTTTAGATGGG+TGG | - | chr8_4:46838561-46838580 | Msa1328820:intron | 45.0% |
| CAGCCACCTTTGGATTGTAA+TGG | - | chr8_4:46838764-46838783 | Msa1328820:intron | 45.0% | |
| AAACACGCGGATTTCACTTC+TGG | - | chr8_4:46838933-46838952 | Msa1328820:intron | 45.0% | |
| ATGTACCTAGAGTTGGGTCT+GGG | + | chr8_4:46839389-46839408 | None:intergenic | 45.0% | |
| ACTCTGGGTAAATGAACCTC+TGG | - | chr8_4:46839463-46839482 | Msa1328820:intron | 45.0% | |
| CGTCAAAGTAGTGCTCGAAA+AGG | + | chr8_4:46840405-46840424 | None:intergenic | 45.0% | |
| CATCACTTTCACTTCCCACA+TGG | + | chr8_4:46840650-46840669 | None:intergenic | 45.0% | |
| TCTATTAATGGGGGCAACAC+TGG | + | chr8_4:46840783-46840802 | None:intergenic | 45.0% | |
| GAAGCAATTGAAGCTCCGTT+AGG | - | chr8_4:46841361-46841380 | Msa1328820:intron | 45.0% | |
| ! | TGACTTACGAGCAGTTTGCT+TGG | + | chr8_4:46841527-46841546 | None:intergenic | 45.0% |
| CAAACTGCTCGTAAGTCAAC+CGG | - | chr8_4:46841529-46841548 | Msa1328820:intron | 45.0% | |
| TTGGTTGCAAGTTGCTTCCT+TGG | + | chr8_4:46837809-46837828 | None:intergenic | 45.0% | |
| AAGGAAGCAACTTGCAACCA+AGG | - | chr8_4:46841564-46841583 | Msa1328820:intron | 45.0% | |
| TCAAGAGCTCAGTACTCTTC+TGG | + | chr8_4:46838201-46838220 | None:intergenic | 45.0% | |
| !! | AGAGTACTGAGCTCTTGATC+AGG | - | chr8_4:46838203-46838222 | Msa1328820:intron | 45.0% |
| ! | TCACGAACCAATCTCTGGAA+GGG | + | chr8_4:46841959-46841978 | None:intergenic | 45.0% |
| TTCACGAACCAATCTCTGGA+AGG | + | chr8_4:46841960-46841979 | None:intergenic | 45.0% | |
| GGGCATAATAGTAACTCGCT+TGG | + | chr8_4:46838483-46838502 | None:intergenic | 45.0% | |
| GCGAGTTACTATTATGCCCA+AGG | - | chr8_4:46838484-46838503 | Msa1328820:intron | 45.0% | |
| !! | TTTGGTGCTGTTTAGATGGG+TGG | - | chr8_4:46838561-46838580 | Msa1328820:intron | 45.0% |
| !!! | TTTTTTCATAATTATTTAAT+CGG | - | chr8_4:46839140-46839159 | Msa1328820:intron | 5.0% |
| !!! | TAAAACTTTTTATATAAAAA+AGG | - | chr8_4:46839175-46839194 | Msa1328820:intron | 5.0% |
| !!! | AAAACTTTTTATATAAAAAA+GGG | - | chr8_4:46839176-46839195 | Msa1328820:intron | 5.0% |
| ACTGCTCGTAAGTCTACTGG+TGG | - | chr8_4:46837776-46837795 | Msa1328820:CDS | 50.0% | |
| CAGACTTACGTGCAGCCTAA+AGG | + | chr8_4:46837941-46837960 | None:intergenic | 50.0% | |
| TCACCGAAGAGCAACAGTTC+CGG | + | chr8_4:46838006-46838025 | None:intergenic | 50.0% | |
| ! | TCACGAACCAACCTCTGGAA+GGG | + | chr8_4:46838235-46838254 | None:intergenic | 50.0% |
| TTCACGAACCAACCTCTGGA+AGG | + | chr8_4:46838236-46838255 | None:intergenic | 50.0% | |
| ! | CAGCATGACTCTGGAAACGA+AGG | + | chr8_4:46838385-46838404 | None:intergenic | 50.0% |
| ATGCAAGCACAGCATGACTC+TGG | + | chr8_4:46838394-46838413 | None:intergenic | 50.0% | |
| TGCTGTGCTTGCATTGCAAG+AGG | - | chr8_4:46838400-46838419 | Msa1328820:intron | 50.0% | |
| GCTGCTGAGGCATATCTTGT+TGG | - | chr8_4:46838422-46838441 | Msa1328820:intron | 50.0% | |
| TATGCCCAAGGACATCCAGT+TGG | - | chr8_4:46838496-46838515 | Msa1328820:intron | 50.0% | |
| CTTGCCAACTGGATGTCCTT+GGG | + | chr8_4:46838503-46838522 | None:intergenic | 50.0% | |
| CTTAAGGAGGATGCCGTGTT+TGG | - | chr8_4:46838543-46838562 | Msa1328820:intron | 50.0% | |
| TTTGGGTATGCAGCCACCTT+TGG | - | chr8_4:46838754-46838773 | Msa1328820:intron | 50.0% | |
| ! | GTTCGTTGAGGTGTCTACAC+AGG | + | chr8_4:46839059-46839078 | None:intergenic | 50.0% |
| GACACCTCAACGAACTCATG+TGG | - | chr8_4:46839064-46839083 | Msa1328820:intron | 50.0% | |
| GTGTCCACATGAGTTCGTTG+AGG | + | chr8_4:46839071-46839090 | None:intergenic | 50.0% | |
| CATGTACCTAGAGTTGGGTC+TGG | + | chr8_4:46839390-46839409 | None:intergenic | 50.0% | |
| GGCTGCATGTACCTAGAGTT+GGG | + | chr8_4:46839395-46839414 | None:intergenic | 50.0% | |
| AGGCTGCATGTACCTAGAGT+TGG | + | chr8_4:46839396-46839415 | None:intergenic | 50.0% | |
| CTGGGTAAATGAACCTCTGG+TGG | - | chr8_4:46839466-46839485 | Msa1328820:intron | 50.0% | |
| !! | GTTGAAGGTGCTTGTCCGAT+TGG | - | chr8_4:46839639-46839658 | Msa1328820:intron | 50.0% |
| ACGCAGGATTGTTGCACATG+TGG | - | chr8_4:46840328-46840347 | Msa1328820:intron | 50.0% | |
| TCGTAAGTCAACCGGTGGAA+AGG | - | chr8_4:46841537-46841556 | Msa1328820:intron | 50.0% | |
| CGTAAGTCTGCACCAACTAC+TGG | - | chr8_4:46841694-46841713 | Msa1328820:intron | 50.0% | |
| AAGTCTGCACCAACTACTGG+TGG | - | chr8_4:46841697-46841716 | Msa1328820:intron | 50.0% | |
| AAACCACATCGTTATCGCCC+AGG | - | chr8_4:46841727-46841746 | Msa1328820:CDS | 50.0% | |
| ACCGAAGAGCAACAGTTCCT+GGG | + | chr8_4:46841747-46841766 | None:intergenic | 50.0% | |
| AACCGAAGAGCAACAGTTCC+TGG | + | chr8_4:46841748-46841767 | None:intergenic | 50.0% | |
| ! | CACGAACCAATCTCTGGAAG+GGG | + | chr8_4:46841958-46841977 | None:intergenic | 50.0% |
| ! | CAGCATGACTCTGGAAACGA+AGG | + | chr8_4:46838385-46838404 | None:intergenic | 50.0% |
| ATGCAAGCACAGCATGACTC+TGG | + | chr8_4:46838394-46838413 | None:intergenic | 50.0% | |
| TGCTGTGCTTGCATTGCAAG+AGG | - | chr8_4:46838400-46838419 | Msa1328820:intron | 50.0% | |
| GCTGCTGAGGCATATCTTGT+TGG | - | chr8_4:46838422-46838441 | Msa1328820:intron | 50.0% | |
| TATGCCCAAGGACATCCAGT+TGG | - | chr8_4:46838496-46838515 | Msa1328820:intron | 50.0% | |
| CTTGCCAACTGGATGTCCTT+GGG | + | chr8_4:46838503-46838522 | None:intergenic | 50.0% | |
| CCAAAAGCAGCATCCTCCTT+AGG | + | chr8_4:46842268-46842287 | None:intergenic | 50.0% | |
| !!! | CCTAAGGAGGATGCTGCTTT+TGG | - | chr8_4:46842265-46842284 | Msa1328820:intron | 50.0% |
| !! | CTACTGGTGGAAAGGCACCT+AGG | - | chr8_4:46837789-46837808 | Msa1328820:CDS | 55.0% |
| CGTAAGTCTGCTCCCACTAC+TGG | - | chr8_4:46837951-46837970 | Msa1328820:intron | 55.0% | |
| AAGTCTGCTCCCACTACTGG+TGG | - | chr8_4:46837954-46837973 | Msa1328820:intron | 55.0% | |
| AAACCACATCGTTACCGCCC+CGG | - | chr8_4:46837984-46838003 | Msa1328820:CDS | 55.0% | |
| ACCGAAGAGCAACAGTTCCG+GGG | + | chr8_4:46838004-46838023 | None:intergenic | 55.0% | |
| CACCGAAGAGCAACAGTTCC+GGG | + | chr8_4:46838005-46838024 | None:intergenic | 55.0% | |
| ! | CACGAACCAACCTCTGGAAG+GGG | + | chr8_4:46838234-46838253 | None:intergenic | 55.0% |
| TGCATTGCAAGAGGCTGCTG+AGG | - | chr8_4:46838409-46838428 | Msa1328820:intron | 55.0% | |
| CCTTGCCAACTGGATGTCCT+TGG | + | chr8_4:46838504-46838523 | None:intergenic | 55.0% | |
| CCAAGGACATCCAGTTGGCA+AGG | - | chr8_4:46838501-46838520 | Msa1328820:intron | 55.0% | |
| AGGACATCCAGTTGGCAAGG+AGG | - | chr8_4:46838504-46838523 | Msa1328820:intron | 55.0% | |
| GCAAACGAGACATCCACCAG+AGG | + | chr8_4:46839482-46839501 | None:intergenic | 55.0% | |
| GGATAGTGTCTCGTAGCCGT+TGG | - | chr8_4:46840842-46840861 | Msa1328820:intron | 55.0% | |
| ! | CGTGTCGGTCAGAGATCCAA+CGG | + | chr8_4:46840861-46840880 | None:intergenic | 55.0% |
| ACTGCTCGTAAGTCAACCGG+TGG | - | chr8_4:46841532-46841551 | Msa1328820:intron | 55.0% | |
| !! | CTTCCTTGGTGCCTTTCCAC+CGG | + | chr8_4:46841551-46841570 | None:intergenic | 55.0% |
| GTTCCTGGGCGATAACGATG+TGG | + | chr8_4:46841733-46841752 | None:intergenic | 55.0% | |
| GCCCAGGAACTGTTGCTCTT+CGG | - | chr8_4:46841743-46841762 | Msa1328820:CDS | 55.0% | |
| GAAGCTCCCCTTCCAGAGAT+TGG | - | chr8_4:46841949-46841968 | Msa1328820:CDS | 55.0% | |
| TGCATTGCAAGAGGCTGCTG+AGG | - | chr8_4:46838409-46838428 | Msa1328820:intron | 55.0% | |
| CCTTGCCAACTGGATGTCCT+TGG | + | chr8_4:46838504-46838523 | None:intergenic | 55.0% | |
| CCAAGGACATCCAGTTGGCA+AGG | - | chr8_4:46838501-46838520 | Msa1328820:intron | 55.0% | |
| AGGACATCCAGTTGGCAAGG+AGG | - | chr8_4:46838504-46838523 | Msa1328820:intron | 55.0% | |
| GAAGAGCAACAGTTCCGGGG+CGG | + | chr8_4:46838001-46838020 | None:intergenic | 60.0% | |
| GCCCCGGAACTGTTGCTCTT+CGG | - | chr8_4:46838000-46838019 | Msa1328820:CDS | 60.0% | |
| TCAGGAAGCTCCCCTTCCAG+AGG | - | chr8_4:46838221-46838240 | Msa1328820:intron | 60.0% | |
| GAAGCTCCCCTTCCAGAGGT+TGG | - | chr8_4:46838225-46838244 | Msa1328820:intron | 60.0% | |
| CACGGATCCTCCTTGCCAAC+TGG | + | chr8_4:46838514-46838533 | None:intergenic | 60.0% | |
| CAGTTGGCAAGGAGGATCCG+TGG | - | chr8_4:46838512-46838531 | Msa1328820:intron | 60.0% | |
| ATCCGTGGTGAGCGCGCTTA+AGG | - | chr8_4:46838527-46838546 | Msa1328820:intron | 60.0% | |
| CTCCTTAAGCGCGCTCACCA+CGG | + | chr8_4:46838532-46838551 | None:intergenic | 60.0% | |
| CGATGCCCAGACCCAACTCT+AGG | - | chr8_4:46839381-46839400 | Msa1328820:intron | 60.0% | |
| !! | CAACCGGTGGAAAGGCACCA+AGG | - | chr8_4:46841545-46841564 | Msa1328820:intron | 60.0% |
| CACGGATCCTCCTTGCCAAC+TGG | + | chr8_4:46838514-46838533 | None:intergenic | 60.0% | |
| CAGTTGGCAAGGAGGATCCG+TGG | - | chr8_4:46838512-46838531 | Msa1328820:intron | 60.0% | |
| TACTGGGCATGCAGCCACTC+TGG | - | chr8_4:46842461-46842480 | Msa1328820:intron | 60.0% | |
| GTTCCGGGGCGGTAACGATG+TGG | + | chr8_4:46837990-46838009 | None:intergenic | 65.0% | |
| CGTGGTGAGCGCGCTTAAGG+AGG | - | chr8_4:46838530-46838549 | Msa1328820:intron | 65.0% | |
| ATCCGTGGTGAGCGCGCCTA+AGG | - | chr8_4:46842249-46842268 | Msa1328820:intron | 65.0% | |
| CTCCTTAGGCGCGCTCACCA+CGG | + | chr8_4:46842254-46842273 | None:intergenic | 65.0% | |
| CGTGGTGAGCGCGCCTAAGG+AGG | - | chr8_4:46842252-46842271 | Msa1328820:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 46837091 | 46842636 | 46837091 | ID=Msa1328820;Name=Msa1328820 |
| chr8_4 | mRNA | 46837091 | 46842636 | 46837091 | ID=Msa1328820-mRNA-1;Parent=Msa1328820;Name=Msa1328820-mRNA-1;_AED=0.23;_eAED=0.23;_QI=65|0.87|0.88|1|0.87|0.88|9|367|253 |
| chr8_4 | exon | 46837091 | 46837628 | 46837091 | ID=Msa1328820-mRNA-1:exon:13448;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46837730 | 46837820 | 46837730 | ID=Msa1328820-mRNA-1:exon:13447;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46837963 | 46838039 | 46837963 | ID=Msa1328820-mRNA-1:exon:13446;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46838142 | 46838213 | 46838142 | ID=Msa1328820-mRNA-1:exon:13445;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46841240 | 46841350 | 46841240 | ID=Msa1328820-mRNA-1:exon:13444;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46841454 | 46841544 | 46841454 | ID=Msa1328820-mRNA-1:exon:13443;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46841706 | 46841782 | 46841706 | ID=Msa1328820-mRNA-1:exon:13442;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46841898 | 46841969 | 46841898 | ID=Msa1328820-mRNA-1:exon:13441;Parent=Msa1328820-mRNA-1 |
| chr8_4 | exon | 46842572 | 46842636 | 46842572 | ID=Msa1328820-mRNA-1:exon:13440;Parent=Msa1328820-mRNA-1 |
| chr8_4 | five_prime_UTR | 46842572 | 46842636 | 46842572 | ID=Msa1328820-mRNA-1:five_prime_utr;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46841898 | 46841969 | 46841898 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46841706 | 46841782 | 46841706 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46841454 | 46841544 | 46841454 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46841240 | 46841350 | 46841240 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46838142 | 46838213 | 46838142 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46837963 | 46838039 | 46837963 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46837730 | 46837820 | 46837730 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | CDS | 46837458 | 46837628 | 46837458 | ID=Msa1328820-mRNA-1:cds;Parent=Msa1328820-mRNA-1 |
| chr8_4 | three_prime_UTR | 46837091 | 46837457 | 46837091 | ID=Msa1328820-mRNA-1:three_prime_utr;Parent=Msa1328820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
