Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205160 | XP_010446577.2 | 90.357 | 280 | 0 | 1 | 1 | 253 | 1 | 280 | 6.98e-175 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205160 | sp|P80553|H3_NARPS | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.17e-93 | 274 |
| Msa1205160 | sp|P80553|H3_NARPS | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.77e-80 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205160 | A0A3S3Q207 | 95.703 | 256 | 8 | 1 | 1 | 253 | 1 | 256 | 9.80e-173 | 485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa1205160 | -0.803897 | 2.799351e-49 | -8.615850e-47 |
| Msa0104700 | Msa1205160 | -0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0149300 | Msa1205160 | -0.803063 | 4.167705e-49 | -8.615850e-47 |
| Msa1000930 | Msa1205160 | -0.809039 | 2.304218e-50 | -8.615850e-47 |
| Msa1103980 | Msa1205160 | -0.800941 | 1.137686e-48 | -8.615850e-47 |
| Msa0358890 | Msa1205160 | -0.809086 | 2.251394e-50 | -8.615850e-47 |
| Msa1205160 | Msa1215630 | -0.813788 | 2.143614e-51 | -8.615850e-47 |
| Msa1205160 | Msa1250210 | 0.960371 | 1.755440e-118 | -8.615850e-47 |
| Msa1205160 | Msa1328820 | 0.806891 | 6.598953e-50 | -8.615850e-47 |
| Msa0584860 | Msa1205160 | -0.809093 | 2.243764e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205160 | MtrunA17_Chr4g0054151 | 100.000 | 136 | 0 | 0 | 118 | 253 | 4 | 139 | 5.72e-95 | 275 |
| Msa1205160 | MtrunA17_Chr4g0054151 | 90.441 | 136 | 10 | 1 | 1 | 133 | 4 | 139 | 3.33e-81 | 240 |
| Msa1205160 | MtrunA17_Chr4g0054161 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1205160 | MtrunA17_Chr4g0054161 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1205160 | MtrunA17_Chr8g0363741 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1205160 | MtrunA17_Chr8g0363741 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1205160 | MtrunA17_Chr1g0156021 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 8.64e-95 | 274 |
| Msa1205160 | MtrunA17_Chr1g0156021 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 4.98e-81 | 239 |
| Msa1205160 | MtrunA17_Chr8g0388121 | 99.265 | 136 | 1 | 0 | 118 | 253 | 1 | 136 | 3.18e-94 | 273 |
| Msa1205160 | MtrunA17_Chr8g0388121 | 89.706 | 136 | 11 | 1 | 1 | 133 | 1 | 136 | 1.73e-80 | 238 |
| Msa1205160 | MtrunA17_Chr5g0410931 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr5g0410931 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr5g0410951 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr5g0410951 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr8g0383851 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr8g0383851 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr8g0383781 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr8g0383781 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr8g0390361 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr8g0390361 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr2g0295191 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr2g0295191 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr7g0237661 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr7g0237661 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr4g0033041 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr4g0033041 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr7g0218971 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr7g0218971 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr4g0046301 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr4g0046301 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr8g0364801 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 2.61e-91 | 265 |
| Msa1205160 | MtrunA17_Chr8g0364801 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 1.87e-77 | 230 |
| Msa1205160 | MtrunA17_Chr2g0319141 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 2.69e-88 | 258 |
| Msa1205160 | MtrunA17_Chr2g0319141 | 85.294 | 136 | 17 | 1 | 1 | 133 | 1 | 136 | 7.42e-77 | 229 |
| Msa1205160 | MtrunA17_Chr2g0319151 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 2.69e-88 | 258 |
| Msa1205160 | MtrunA17_Chr2g0319151 | 85.294 | 136 | 17 | 1 | 1 | 133 | 1 | 136 | 7.42e-77 | 229 |
| Msa1205160 | MtrunA17_Chr2g0319131 | 86.301 | 146 | 10 | 1 | 118 | 253 | 1 | 146 | 1.45e-82 | 243 |
| Msa1205160 | MtrunA17_Chr2g0319131 | 77.397 | 146 | 20 | 2 | 1 | 133 | 1 | 146 | 8.13e-69 | 209 |
| Msa1205160 | MtrunA17_Chr2g0319121 | 85.294 | 136 | 18 | 2 | 118 | 252 | 1 | 135 | 8.06e-75 | 223 |
| Msa1205160 | MtrunA17_Chr2g0319121 | 83.193 | 119 | 18 | 2 | 1 | 118 | 1 | 118 | 3.12e-62 | 191 |
| Msa1205160 | MtrunA17_Chr7g0218961 | 83.036 | 112 | 19 | 0 | 142 | 253 | 2 | 113 | 5.68e-61 | 187 |
| Msa1205160 | MtrunA17_Chr7g0218961 | 82.979 | 94 | 16 | 0 | 25 | 118 | 2 | 95 | 3.11e-50 | 160 |
| Msa1205160 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 118 | 251 | 10 | 142 | 1.71e-54 | 172 |
| Msa1205160 | MtrunA17_Chr7g0222991 | 64.407 | 118 | 41 | 1 | 1 | 118 | 10 | 126 | 3.06e-43 | 143 |
| Msa1205160 | MtrunA17_Chr7g0223001 | 60.145 | 138 | 40 | 4 | 115 | 251 | 23 | 146 | 6.48e-43 | 143 |
| Msa1205160 | MtrunA17_Chr7g0223001 | 58.120 | 117 | 35 | 3 | 3 | 118 | 27 | 130 | 1.43e-32 | 116 |
| Msa1205160 | MtrunA17_Chr5g0407311 | 63.793 | 116 | 39 | 2 | 1 | 116 | 1 | 113 | 6.18e-41 | 136 |
| Msa1205160 | MtrunA17_Chr5g0407311 | 63.793 | 116 | 39 | 2 | 118 | 233 | 1 | 113 | 6.18e-41 | 136 |
| Msa1205160 | MtrunA17_Chr7g0240791 | 96.970 | 66 | 2 | 0 | 1 | 66 | 1 | 66 | 6.30e-38 | 130 |
| Msa1205160 | MtrunA17_Chr7g0240791 | 96.970 | 66 | 2 | 0 | 118 | 183 | 1 | 66 | 6.30e-38 | 130 |
| Msa1205160 | MtrunA17_Chr8g0347231 | 56.122 | 98 | 42 | 1 | 154 | 250 | 28 | 125 | 1.06e-29 | 108 |
| Msa1205160 | MtrunA17_Chr8g0347231 | 51.020 | 98 | 44 | 2 | 37 | 130 | 28 | 125 | 8.55e-23 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205160 | AT4G40030.3 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40030.3 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40030.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40030.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40030.4 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40030.4 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT5G10980.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT5G10980.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40040.2 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40040.2 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40040.3 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40040.3 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40040.1 | 100.000 | 136 | 0 | 0 | 118 | 253 | 1 | 136 | 1.19e-94 | 274 |
| Msa1205160 | AT4G40040.1 | 90.441 | 136 | 10 | 1 | 1 | 133 | 1 | 136 | 6.88e-81 | 239 |
| Msa1205160 | AT4G40030.2 | 99.270 | 137 | 1 | 0 | 117 | 253 | 28 | 164 | 1.25e-94 | 275 |
| Msa1205160 | AT4G40030.2 | 90.441 | 136 | 10 | 1 | 1 | 133 | 29 | 164 | 8.82e-81 | 240 |
| Msa1205160 | AT1G09200.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1205160 | AT1G09200.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1205160 | AT5G65360.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1205160 | AT5G65360.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1205160 | AT5G10390.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1205160 | AT5G10390.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1205160 | AT5G10400.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1205160 | AT5G10400.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1205160 | AT3G27360.1 | 97.059 | 136 | 4 | 0 | 118 | 253 | 1 | 136 | 3.37e-91 | 265 |
| Msa1205160 | AT3G27360.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.32e-77 | 230 |
| Msa1205160 | AT1G75600.1 | 96.324 | 136 | 5 | 0 | 118 | 253 | 1 | 136 | 7.92e-91 | 264 |
| Msa1205160 | AT1G75600.1 | 87.500 | 136 | 14 | 1 | 1 | 133 | 1 | 136 | 2.05e-77 | 230 |
| Msa1205160 | AT1G13370.1 | 94.853 | 136 | 7 | 0 | 118 | 253 | 1 | 136 | 1.55e-89 | 261 |
| Msa1205160 | AT1G13370.1 | 89.231 | 130 | 11 | 1 | 1 | 127 | 1 | 130 | 3.30e-76 | 227 |
| Msa1205160 | AT5G65350.1 | 92.647 | 136 | 10 | 0 | 118 | 253 | 1 | 136 | 8.23e-87 | 254 |
| Msa1205160 | AT5G65350.1 | 83.824 | 136 | 19 | 1 | 1 | 133 | 1 | 136 | 6.90e-74 | 221 |
| Msa1205160 | AT1G19890.1 | 90.511 | 137 | 12 | 1 | 118 | 253 | 1 | 137 | 1.28e-83 | 246 |
| Msa1205160 | AT1G19890.1 | 81.752 | 137 | 21 | 2 | 1 | 133 | 1 | 137 | 1.17e-71 | 216 |
| Msa1205160 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 118 | 252 | 1 | 130 | 5.05e-64 | 196 |
| Msa1205160 | AT5G12910.1 | 63.704 | 135 | 41 | 3 | 1 | 132 | 1 | 130 | 2.13e-52 | 167 |
| Msa1205160 | AT1G01370.2 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1205160 | AT1G01370.2 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1205160 | AT1G01370.1 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1205160 | AT1G01370.1 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1205160 | AT1G01370.4 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1205160 | AT1G01370.4 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
| Msa1205160 | AT1G01370.3 | 54.867 | 113 | 48 | 2 | 141 | 251 | 63 | 174 | 1.04e-30 | 112 |
| Msa1205160 | AT1G01370.3 | 53.608 | 97 | 42 | 2 | 24 | 118 | 63 | 158 | 2.11e-23 | 94.0 |
Find 93 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCTTCTTCTTCTCTTC+AGG | 0.221581 | 8_1:-61294130 | None:intergenic |
| CCTAAGGAGGATGCTGCTTT+TGG | 0.276400 | 8_1:+61299275 | Msa1205160:exon |
| TGTGCATATTCGTTTGGAAT+TGG | 0.300321 | 8_1:+61299555 | Msa1205160:three_prime_UTR |
| AGCTTCTGTGCATATTCGTT+TGG | 0.325215 | 8_1:+61299549 | Msa1205160:three_prime_UTR |
| TTGGTTGCAAGTTGCTTCCT+TGG | 0.333909 | 8_1:-61298579 | None:intergenic |
| CACCGAAGAGCAACAGTTCC+TGG | 0.341134 | 8_1:-61298766 | None:intergenic |
| TTGGTTGCAAGTTGCTTCCT+AGG | 0.341167 | 8_1:-61294820 | None:intergenic |
| TCAAGAGCTCGGTACTCTTC+TGG | 0.348030 | 8_1:-61298938 | None:intergenic |
| CCTTGCCAACTGGATGTCCT+TGG | 0.351370 | 8_1:-61299233 | None:intergenic |
| CACGGATCCTCCTTGCCAAC+TGG | 0.363910 | 8_1:-61299243 | None:intergenic |
| GTGCATATTCGTTTGGAATT+GGG | 0.369903 | 8_1:+61299556 | Msa1205160:three_prime_UTR |
| CACCGAAGAGCAACAGTTCC+GGG | 0.372127 | 8_1:-61295001 | None:intergenic |
| GCTAGAAATACTAGATTAGA+TGG | 0.379840 | 8_1:-61299529 | None:intergenic |
| TGAAATTGCTCAAGACTTCA+AGG | 0.405126 | 8_1:+61295251 | Msa1205160:CDS |
| TCACCGAAGAGCAACAGTTC+CGG | 0.407614 | 8_1:-61295002 | None:intergenic |
| TAATTTGCTTGCAATGACTT+TGG | 0.419143 | 8_1:+61299433 | Msa1205160:three_prime_UTR |
| CTTGCCAACTGGATGTCCTT+GGG | 0.434839 | 8_1:-61299232 | None:intergenic |
| ATATCTTGTTGGTCTCTTTG+AGG | 0.438404 | 8_1:+61299165 | Msa1205160:CDS |
| TGAAATTGCTCAGGACTTCA+AGG | 0.441698 | 8_1:+61298992 | Msa1205160:CDS |
| TTCTTAACTCCACCAGTAGT+TGG | 0.444620 | 8_1:-61298727 | None:intergenic |
| ATATCTTGTTGGTCTGTTTG+AGG | 0.444642 | 8_1:+61295432 | Msa1205160:CDS |
| GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8_1:+61295421 | Msa1205160:CDS |
| GCTGCTGAGGCATATCTTGT+TGG | 0.457640 | 8_1:+61299154 | Msa1205160:CDS |
| TTGAATTGATTTAGTTGCTA+GGG | 0.461048 | 8_1:+61299336 | Msa1205160:three_prime_UTR |
| CACGAACCAACCTCTGGAAT+GGG | 0.467959 | 8_1:-61298971 | None:intergenic |
| GCCCCGGAACTGTTGCTCTT+CGG | 0.468662 | 8_1:+61294999 | Msa1205160:CDS |
| CGCAAGTCTGCACCAACTAC+TGG | 0.471576 | 8_1:+61298715 | Msa1205160:CDS |
| GCCCAGGAACTGTTGCTCTT+CGG | 0.472314 | 8_1:+61298764 | Msa1205160:CDS |
| CTTCCTTGGTGCCTTACCAC+CGG | 0.479634 | 8_1:-61298565 | None:intergenic |
| TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8_1:+61295408 | Msa1205160:CDS |
| TGCATTGCAAGAGGCTGCTG+AGG | 0.479818 | 8_1:+61299141 | Msa1205160:CDS |
| AGAGTACTGAGCTCTTGATC+AGG | 0.482557 | 8_1:+61295202 | Msa1205160:CDS |
| CGTAAGTCTGCTCCCACTAC+TGG | 0.483075 | 8_1:+61294950 | Msa1205160:CDS |
| AGAGTACCGAGCTCTTGATC+AGG | 0.484025 | 8_1:+61298943 | Msa1205160:CDS |
| CAAACTGCTCGTAAGTCTAC+TGG | 0.493098 | 8_1:+61294787 | Msa1205160:CDS |
| ATCCGTGGTGAGCGCGCCTA+AGG | 0.494321 | 8_1:+61299259 | Msa1205160:CDS |
| ATTGAATTGATTTAGTTGCT+AGG | 0.497538 | 8_1:+61299335 | Msa1205160:three_prime_UTR |
| ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8_1:-61295390 | None:intergenic |
| ATGCAAGCACAGCATGACTC+TGG | 0.500306 | 8_1:-61299123 | None:intergenic |
| TCGTAAGTCAACCGGTGGTA+AGG | 0.501661 | 8_1:+61298554 | Msa1205160:CDS |
| CAATTTCACGAACCAACCTC+TGG | 0.503886 | 8_1:-61298977 | None:intergenic |
| CTAGATTAGATGGCAACAAA+AGG | 0.506318 | 8_1:-61299519 | None:intergenic |
| CAATTTCACGAACCAACCTC+TGG | 0.507537 | 8_1:-61295236 | None:intergenic |
| TGACTTACGAGCTGTTTGCT+TGG | 0.508768 | 8_1:-61298541 | None:intergenic |
| GTTGGTTCGTGAAATTGCTC+AGG | 0.513873 | 8_1:+61298983 | Msa1205160:CDS |
| TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8_1:+61295399 | Msa1205160:CDS |
| TGCTGTGCTTGCATTGCAAG+AGG | 0.513898 | 8_1:+61299132 | Msa1205160:CDS |
| CAAACAGCTCGTAAGTCAAC+CGG | 0.519692 | 8_1:+61298546 | Msa1205160:CDS |
| TCACGAACCAACCTCTGGAA+TGG | 0.521454 | 8_1:-61298972 | None:intergenic |
| TTTGGTGCTGTTTAGATGGG+TGG | 0.522117 | 8_1:+61299293 | Msa1205160:three_prime_UTR |
| GAAGCTCCCCTTCCAGAGGT+TGG | 0.527763 | 8_1:+61295224 | Msa1205160:CDS |
| AGACTTACGAGCAGTTTGCT+TGG | 0.530724 | 8_1:-61294782 | None:intergenic |
| TTTCTTAACTCCACCAGTAG+TGG | 0.546326 | 8_1:-61294963 | None:intergenic |
| CCAAAAGCAGCATCCTCCTT+AGG | 0.547324 | 8_1:-61299275 | None:intergenic |
| TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8_1:-61295474 | None:intergenic |
| TAATAGTAACTCGCTTGGCA+TGG | 0.547452 | 8_1:-61299207 | None:intergenic |
| CTCCTTAGGCGCGCTCACCA+CGG | 0.549887 | 8_1:-61299261 | None:intergenic |
| CACGAACCAACCTCTGGAAG+GGG | 0.550311 | 8_1:-61295230 | None:intergenic |
| ACCGAAGAGCAACAGTTCCT+GGG | 0.559961 | 8_1:-61298765 | None:intergenic |
| TTCTTAACTCCACCAGTAGT+GGG | 0.561000 | 8_1:-61294962 | None:intergenic |
| CGTGGTGAGCGCGCCTAAGG+AGG | 0.568469 | 8_1:+61299262 | Msa1205160:exon |
| GAAGCTCCCATTCCAGAGGT+TGG | 0.572362 | 8_1:+61298965 | Msa1205160:CDS |
| GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8_1:-61295479 | None:intergenic |
| GGGCATAATAGTAACTCGCT+TGG | 0.573260 | 8_1:-61299212 | None:intergenic |
| AAGGAAGCAACTTGCAACCA+AGG | 0.574800 | 8_1:+61298581 | Msa1205160:CDS |
| AAACCACATCGTTACCGCCC+CGG | 0.580189 | 8_1:+61294983 | Msa1205160:CDS |
| AAGCCACATCGTTATCGCCC+AGG | 0.581263 | 8_1:+61298748 | Msa1205160:CDS |
| TCACGAACCAACCTCTGGAA+GGG | 0.587957 | 8_1:-61295231 | None:intergenic |
| CCAAGGACATCCAGTTGGCA+AGG | 0.588868 | 8_1:+61299233 | Msa1205160:CDS |
| TTCACGAACCAACCTCTGGA+AGG | 0.592307 | 8_1:-61295232 | None:intergenic |
| TCGTAAGTCTACTGGTGGAA+AGG | 0.600087 | 8_1:+61294795 | Msa1205160:CDS |
| TGAATTGATTTAGTTGCTAG+GGG | 0.600803 | 8_1:+61299337 | Msa1205160:three_prime_UTR |
| AAGTCTGCTCCCACTACTGG+TGG | 0.603052 | 8_1:+61294953 | Msa1205160:CDS |
| TAGGAAGCAACTTGCAACCA+AGG | 0.610266 | 8_1:+61294822 | Msa1205160:CDS |
| GAGCTTCCTGATCAAGAGCT+CGG | 0.624511 | 8_1:-61298949 | None:intergenic |
| GCGAGTTACTATTATGCCCA+AGG | 0.629580 | 8_1:+61299216 | Msa1205160:CDS |
| TCAGGAAGCTCCCCTTCCAG+AGG | 0.635098 | 8_1:+61295220 | Msa1205160:CDS |
| CTACTGGTGGAAAGGCACCT+AGG | 0.637308 | 8_1:+61294803 | Msa1205160:CDS |
| GTTCCGGGGCGGTAACGATG+TGG | 0.646981 | 8_1:-61294986 | None:intergenic |
| AAGTCTGCACCAACTACTGG+TGG | 0.650548 | 8_1:+61298718 | Msa1205160:CDS |
| ACCGAAGAGCAACAGTTCCG+GGG | 0.653413 | 8_1:-61295000 | None:intergenic |
| TATGCCCAAGGACATCCAGT+TGG | 0.656475 | 8_1:+61299228 | Msa1205160:CDS |
| CAACCGGTGGTAAGGCACCA+AGG | 0.657003 | 8_1:+61298562 | Msa1205160:CDS |
| CCACAAAATAAAACGCAGAG+TGG | 0.659380 | 8_1:-61299492 | None:intergenic |
| ACTGCTCGTAAGTCTACTGG+TGG | 0.660657 | 8_1:+61294790 | Msa1205160:CDS |
| TCAGGAAGCTCCCATTCCAG+AGG | 0.664518 | 8_1:+61298961 | Msa1205160:CDS |
| CAGTTGGCAAGGAGGATCCG+TGG | 0.664833 | 8_1:+61299244 | Msa1205160:CDS |
| CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8_1:-61295381 | None:intergenic |
| CAGCATGACTCTGGAAACGA+AGG | 0.672290 | 8_1:-61299114 | None:intergenic |
| AGGACATCCAGTTGGCAAGG+AGG | 0.674393 | 8_1:+61299236 | Msa1205160:CDS |
| GTTCCTGGGCGATAACGATG+TGG | 0.684844 | 8_1:-61298751 | None:intergenic |
| ACAGCTCGTAAGTCAACCGG+TGG | 0.708150 | 8_1:+61298549 | Msa1205160:CDS |
| GAAGAGCAACAGTTCCGGGG+CGG | 0.724004 | 8_1:-61294997 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGGAAATTAAAAAAAAAAA+CGG | - | chr8_1:61295963-61295982 | None:intergenic | 10.0% |
| !!! | TTCTTTTCTTCAAATTTTTT+AGG | + | chr8_1:61294187-61294206 | Msa1205160:intron | 15.0% |
| !!! | TTCAAATTTTTTAGGAAATT+AGG | + | chr8_1:61294195-61294214 | Msa1205160:intron | 15.0% |
| !!! | TCAAATTTTTTAGGAAATTA+GGG | + | chr8_1:61294196-61294215 | Msa1205160:intron | 15.0% |
| !! | TTTCTTCAATTTATGAAATT+AGG | + | chr8_1:61294293-61294312 | Msa1205160:intron | 15.0% |
| !! | TTCTTCAATTTATGAAATTA+GGG | + | chr8_1:61294294-61294313 | Msa1205160:intron | 15.0% |
| !! | CTATCAATTAAAATTATGAT+AGG | + | chr8_1:61294597-61294616 | Msa1205160:intron | 15.0% |
| !! | TGGAAATTAAAAAAAAAAAC+GGG | - | chr8_1:61295962-61295981 | None:intergenic | 15.0% |
| !!! | ATGTTTTCGTAATATTTAAA+TGG | + | chr8_1:61296111-61296130 | Msa1205160:intron | 15.0% |
| !! | ACCTAAAAATAAGATAAATT+AGG | - | chr8_1:61298403-61298422 | None:intergenic | 15.0% |
| !!! | GTTTCTAATAATTTGTTATT+TGG | + | chr8_1:61298882-61298901 | Msa1205160:intron | 15.0% |
| !!! | TAATAATTTGTTATTTGGAT+TGG | + | chr8_1:61298887-61298906 | Msa1205160:intron | 15.0% |
| !!! | CTATCTTAATTTTAGTTTTT+GGG | + | chr8_1:61299407-61299426 | Msa1205160:three_prime_UTR | 15.0% |
| !! | TATCAATTTGAATTGTTCTT+AGG | + | chr8_1:61294254-61294273 | Msa1205160:intron | 20.0% |
| !! | AAACCTAAACTAGAAATAAT+TGG | - | chr8_1:61294471-61294490 | None:intergenic | 20.0% |
| !! | TTATTGTGATTGTTAGTTAA+TGG | + | chr8_1:61294629-61294648 | Msa1205160:intron | 20.0% |
| !!! | ATTGATTGTTATTTGCATTA+TGG | + | chr8_1:61294874-61294893 | Msa1205160:intron | 20.0% |
| !!! | TTCTGTTGAAATTTTCTTTA+AGG | + | chr8_1:61295027-61295046 | Msa1205160:intron | 20.0% |
| !! | TTAATATGAAGTGATTGTAT+TGG | + | chr8_1:61295072-61295091 | Msa1205160:intron | 20.0% |
| !! | TAATATGAAGTGATTGTATT+GGG | + | chr8_1:61295073-61295092 | Msa1205160:intron | 20.0% |
| !!! | TGGAAATGATTTAGTTTTAT+AGG | + | chr8_1:61295604-61295623 | Msa1205160:intron | 20.0% |
| !!! | GGAAATGATTTAGTTTTATA+GGG | + | chr8_1:61295605-61295624 | Msa1205160:intron | 20.0% |
| !!! | CTATCTGAATTTTAGTTTTT+GGG | + | chr8_1:61295680-61295699 | Msa1205160:intron | 20.0% |
| !!! | TATATGTTTCTCGTTTATTT+TGG | + | chr8_1:61295735-61295754 | Msa1205160:intron | 20.0% |
| !!! | ATATGTTTCTCGTTTATTTT+GGG | + | chr8_1:61295736-61295755 | Msa1205160:intron | 20.0% |
| !! | GAAATTAAAAAAAAAAACGG+GGG | - | chr8_1:61295960-61295979 | None:intergenic | 20.0% |
| !! | GGAAATTAAAAAAAAAAACG+GGG | - | chr8_1:61295961-61295980 | None:intergenic | 20.0% |
| !!! | TAACTTGCATACAAATTTTT+TGG | - | chr8_1:61296553-61296572 | None:intergenic | 20.0% |
| !! | TAATCTTATTAGATCCATAA+TGG | + | chr8_1:61296728-61296747 | Msa1205160:intron | 20.0% |
| !! | TAATTATGAAAAATGCATAG+AGG | + | chr8_1:61296837-61296856 | Msa1205160:intron | 20.0% |
| !! | TCGTTGACAAAATATATTAT+TGG | - | chr8_1:61296939-61296958 | None:intergenic | 20.0% |
| !! | AAATAACTTCATTATCAGAA+GGG | - | chr8_1:61297174-61297193 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAATGAACGC+AGG | + | chr8_1:61297325-61297344 | Msa1205160:intron | 20.0% |
| !! | TTAGTTTCTATTCAATTGTT+AGG | - | chr8_1:61297541-61297560 | None:intergenic | 20.0% |
| !! | TTTACACAGTAGTATAATAA+TGG | + | chr8_1:61297570-61297589 | Msa1205160:intron | 20.0% |
| !! | TTACACAGTAGTATAATAAT+GGG | + | chr8_1:61297571-61297590 | Msa1205160:intron | 20.0% |
| !!! | ATTTTCTAGAAACACTATAA+CGG | + | chr8_1:61297746-61297765 | Msa1205160:intron | 20.0% |
| !!! | TACGTATTGTTTCTATTAAT+GGG | - | chr8_1:61297815-61297834 | None:intergenic | 20.0% |
| !!! | ATATGAAACTTTGATTTGAA+AGG | - | chr8_1:61297934-61297953 | None:intergenic | 20.0% |
| !!! | ATCATGTTGCATTTTATATT+AGG | + | chr8_1:61298216-61298235 | Msa1205160:intron | 20.0% |
| !! | CATATATTCATGTTTGATTA+AGG | + | chr8_1:61298290-61298309 | Msa1205160:intron | 20.0% |
| !!! | GCCTAATTTATCTTATTTTT+AGG | + | chr8_1:61298399-61298418 | Msa1205160:intron | 20.0% |
| !!! | TTGTTTCTATTGAATTGAAT+TGG | + | chr8_1:61298855-61298874 | Msa1205160:intron | 20.0% |
| !!! | TATTTTAAAACAGTGAGATT+AGG | + | chr8_1:61298910-61298929 | Msa1205160:intron | 20.0% |
| !!! | GCTATCTTAATTTTAGTTTT+TGG | + | chr8_1:61299406-61299425 | Msa1205160:three_prime_UTR | 20.0% |
| ! | TATTGTTCAATTATGTCTCT+AGG | + | chr8_1:61294362-61294381 | Msa1205160:intron | 25.0% |
| !!! | TGTCCAATTATTTCTAGTTT+AGG | + | chr8_1:61294465-61294484 | Msa1205160:intron | 25.0% |
| ! | CTTATATTCATCCATGTTAT+AGG | + | chr8_1:61294566-61294585 | Msa1205160:intron | 25.0% |
| ! | ATTGTTAGTTAATGGAGATT+AGG | + | chr8_1:61294637-61294656 | Msa1205160:intron | 25.0% |
| ! | TTAGGATAAGCAATGAATTT+AGG | + | chr8_1:61294655-61294674 | Msa1205160:intron | 25.0% |
| !! | AACAAATGTTCTGATTTTAG+AGG | + | chr8_1:61294679-61294698 | Msa1205160:intron | 25.0% |
| !! | GAATGTTTGGTTAATTGTTT+TGG | + | chr8_1:61294902-61294921 | Msa1205160:intron | 25.0% |
| !! | TTTGTTTGAAGTAATTGTGT+TGG | + | chr8_1:61295118-61295137 | Msa1205160:intron | 25.0% |
| !! | TTGTTTGAAGTAATTGTGTT+GGG | + | chr8_1:61295119-61295138 | Msa1205160:intron | 25.0% |
| !!! | TTGTTTTAAACAGTGAGATT+AGG | + | chr8_1:61295169-61295188 | Msa1205160:intron | 25.0% |
| !!! | TTGGTTGTTTCTGATATTTT+TGG | + | chr8_1:61295338-61295357 | Msa1205160:intron | 25.0% |
| ! | TTAATCAAACTACGAATGAA+CGG | - | chr8_1:61295638-61295657 | None:intergenic | 25.0% |
| ! | ATTCGTAGTTTGATTAATTG+TGG | + | chr8_1:61295641-61295660 | Msa1205160:intron | 25.0% |
| !!! | GCTATCTGAATTTTAGTTTT+TGG | + | chr8_1:61295679-61295698 | Msa1205160:intron | 25.0% |
| ! | TTACCCTTTATCAATTATTG+AGG | + | chr8_1:61296360-61296379 | Msa1205160:intron | 25.0% |
| ! | TACCCTTTATCAATTATTGA+GGG | + | chr8_1:61296361-61296380 | Msa1205160:intron | 25.0% |
| ! | AACCCTCAATAATTGATAAA+GGG | - | chr8_1:61296366-61296385 | None:intergenic | 25.0% |
| ! | AAACCCTCAATAATTGATAA+AGG | - | chr8_1:61296367-61296386 | None:intergenic | 25.0% |
| ! | TATGCAAGTTATGTTATGAT+TGG | + | chr8_1:61296562-61296581 | Msa1205160:intron | 25.0% |
| !! | TATTTTCCTTGTCAACAAAT+TGG | - | chr8_1:61296682-61296701 | None:intergenic | 25.0% |
| ! | GGATCTAATAAGATTAATCA+TGG | - | chr8_1:61296724-61296743 | None:intergenic | 25.0% |
| ! | GACAATAAACATATCCATTA+TGG | - | chr8_1:61296745-61296764 | None:intergenic | 25.0% |
| !!! | TACATGATTTTGCTATAAAC+AGG | - | chr8_1:61297024-61297043 | None:intergenic | 25.0% |
| ! | GTTTATAGCAAAATCATGTA+TGG | + | chr8_1:61297024-61297043 | Msa1205160:intron | 25.0% |
| ! | CATAAAGAGTTTCAATTCAA+AGG | - | chr8_1:61297099-61297118 | None:intergenic | 25.0% |
| ! | CTTTGAATTGAAACTCTTTA+TGG | + | chr8_1:61297097-61297116 | Msa1205160:intron | 25.0% |
| ! | CAAATAACTTCATTATCAGA+AGG | - | chr8_1:61297175-61297194 | None:intergenic | 25.0% |
| !! | ACAATTTTGCCGTAAAAATA+AGG | + | chr8_1:61297258-61297277 | Msa1205160:intron | 25.0% |
| !!! | TTGTAGCTTCCTTATTTTTA+CGG | - | chr8_1:61297270-61297289 | None:intergenic | 25.0% |
| ! | TTTAACGTGACATTTACATT+TGG | - | chr8_1:61297458-61297477 | None:intergenic | 25.0% |
| !!! | AAGAGCATTTGAAATTTACT+TGG | - | chr8_1:61297511-61297530 | None:intergenic | 25.0% |
| ! | AAATTTCAAATGCTCTTTGT+TGG | + | chr8_1:61297514-61297533 | Msa1205160:intron | 25.0% |
| ! | TATGTGAATGATTTATCGTA+TGG | + | chr8_1:61297684-61297703 | Msa1205160:intron | 25.0% |
| ! | ATGTGAATGATTTATCGTAT+GGG | + | chr8_1:61297685-61297704 | Msa1205160:intron | 25.0% |
| !!! | ACGTATTGTTTCTATTAATG+GGG | - | chr8_1:61297814-61297833 | None:intergenic | 25.0% |
| !!! | GTACGTATTGTTTCTATTAA+TGG | - | chr8_1:61297816-61297835 | None:intergenic | 25.0% |
| ! | AGAAAAAAGCAAAAATTTCC+AGG | + | chr8_1:61297993-61298012 | Msa1205160:intron | 25.0% |
| ! | TAAACCCTAATTTCGTAAAT+CGG | - | chr8_1:61298139-61298158 | None:intergenic | 25.0% |
| ! | ATTGTTAATTGTCGAAGATT+AGG | + | chr8_1:61298439-61298458 | Msa1205160:intron | 25.0% |
| ! | AAGATTAGGTCTTAGTTATT+AGG | + | chr8_1:61298453-61298472 | Msa1205160:intron | 25.0% |
| ! | ATTGTTCTGATTATCTTATC+TGG | + | chr8_1:61298498-61298517 | Msa1205160:intron | 25.0% |
| ! | TTGTTCTGATTATCTTATCT+GGG | + | chr8_1:61298499-61298518 | Msa1205160:intron | 25.0% |
| !!! | TTTTTTTTTCCCTTACCTTT+AGG | + | chr8_1:61298687-61298706 | Msa1205160:intron | 25.0% |
| !! | TCTGTTGAAAATTTTCTTTC+AGG | + | chr8_1:61298793-61298812 | Msa1205160:intron | 25.0% |
| !! | CTGTTGAAAATTTTCTTTCA+GGG | + | chr8_1:61298794-61298813 | Msa1205160:intron | 25.0% |
| ! | TCTATTGAATTGAATTGGTT+TGG | + | chr8_1:61298860-61298879 | Msa1205160:intron | 25.0% |
| !! | ATTGAATTGATTTAGTTGCT+AGG | + | chr8_1:61299335-61299354 | Msa1205160:three_prime_UTR | 25.0% |
| !! | TTGAATTGATTTAGTTGCTA+GGG | + | chr8_1:61299336-61299355 | Msa1205160:three_prime_UTR | 25.0% |
| !!! | TTATGTGTTCTTGTTTTTAC+TGG | + | chr8_1:61299461-61299480 | Msa1205160:three_prime_UTR | 25.0% |
| !!! | TATGTGTTCTTGTTTTTACT+GGG | + | chr8_1:61299462-61299481 | Msa1205160:three_prime_UTR | 25.0% |
| AGAAGAAAGCAAAAATTTCC+AGG | + | chr8_1:61294143-61294162 | Msa1205160:five_prime_UTR | 30.0% | |
| AAAAGAAAAGAAAACGAACC+TGG | - | chr8_1:61294164-61294183 | None:intergenic | 30.0% | |
| TTGATACGAAAAACAAAGCT+CGG | - | chr8_1:61294240-61294259 | None:intergenic | 30.0% | |
| GAAATTAGGGTTTACGAATT+TGG | + | chr8_1:61294307-61294326 | Msa1205160:intron | 30.0% | |
| AATTGGACAATAGCATAAAC+TGG | - | chr8_1:61294454-61294473 | None:intergenic | 30.0% | |
| TAGTTCTCTTTCCTATAACA+TGG | - | chr8_1:61294580-61294599 | None:intergenic | 30.0% | |
| GTTGATTGTGTTTATGTAGA+TGG | + | chr8_1:61294753-61294772 | Msa1205160:intron | 30.0% | |
| CATTATGGTGATTGAATGTT+TGG | + | chr8_1:61294889-61294908 | Msa1205160:intron | 30.0% | |
| ATCAGTTTAGATGACAGATT+TGG | + | chr8_1:61295319-61295338 | Msa1205160:intron | 30.0% | |
| !! | TGCTGATAGTGTTTTGTTAT+TGG | + | chr8_1:61295584-61295603 | Msa1205160:intron | 30.0% |
| GTTTGATTAATTGTGGTGAT+AGG | + | chr8_1:61295648-61295667 | Msa1205160:intron | 30.0% | |
| !! | TAATTTGCTTGCAATGACTT+TGG | + | chr8_1:61295706-61295725 | Msa1205160:intron | 30.0% |
| ATAGCATAGCATAATAGACA+CGG | - | chr8_1:61296284-61296303 | None:intergenic | 30.0% | |
| CCAAATGAAACATCCATTAA+AGG | - | chr8_1:61296428-61296447 | None:intergenic | 30.0% | |
| ! | CCTTTAATGGATGTTTCATT+TGG | + | chr8_1:61296425-61296444 | Msa1205160:intron | 30.0% |
| ATGTATAATGTACTCAACTC+TGG | + | chr8_1:61296459-61296478 | Msa1205160:intron | 30.0% | |
| TGTATAATGTACTCAACTCT+GGG | + | chr8_1:61296460-61296479 | Msa1205160:intron | 30.0% | |
| TAATCATGGAGTTCAATTGT+TGG | - | chr8_1:61296710-61296729 | None:intergenic | 30.0% | |
| CATAGAGGTGATAAGAAAAA+TGG | + | chr8_1:61296852-61296871 | Msa1205160:intron | 30.0% | |
| !! | TTTTGCTATAAACAGGTGAT+TGG | - | chr8_1:61297017-61297036 | None:intergenic | 30.0% |
| AAGGGCAAACATGTAAAATA+AGG | - | chr8_1:61297075-61297094 | None:intergenic | 30.0% | |
| ! | TGAAACTCTTTATGGCTTTT+AGG | + | chr8_1:61297105-61297124 | Msa1205160:intron | 30.0% |
| TGAATGATTTATGCATTGTG+TGG | + | chr8_1:61297201-61297220 | Msa1205160:intron | 30.0% | |
| ! | TTTTACGGCAAAATTGTGTA+AGG | - | chr8_1:61297255-61297274 | None:intergenic | 30.0% |
| TACACACATACTTAGATACT+TGG | + | chr8_1:61297373-61297392 | Msa1205160:intron | 30.0% | |
| ! | CGTGGACATTTTAAATAATG+TGG | - | chr8_1:61297599-61297618 | None:intergenic | 30.0% |
| ATGTCTAATAAGAACCATGT+GGG | + | chr8_1:61297645-61297664 | Msa1205160:intron | 30.0% | |
| AACCCAAAAATCGTTGTTTA+TGG | + | chr8_1:61297772-61297791 | Msa1205160:intron | 30.0% | |
| ! | GACCATAAACAACGATTTTT+GGG | - | chr8_1:61297777-61297796 | None:intergenic | 30.0% |
| ! | AGACCATAAACAACGATTTT+TGG | - | chr8_1:61297778-61297797 | None:intergenic | 30.0% |
| !! | CGTATTGTTTCTATTAATGG+GGG | - | chr8_1:61297813-61297832 | None:intergenic | 30.0% |
| CGTATATATATATAGCGTGT+CGG | - | chr8_1:61297897-61297916 | None:intergenic | 30.0% | |
| TTTGAAGAAAAAAACGAACC+TGG | - | chr8_1:61298014-61298033 | None:intergenic | 30.0% | |
| ATCTCCGATTTACGAAATTA+GGG | + | chr8_1:61298132-61298151 | Msa1205160:intron | 30.0% | |
| TAGGTTAAGCTATGATCTTA+TGG | + | chr8_1:61298472-61298491 | Msa1205160:intron | 30.0% | |
| AGGTTAAGCTATGATCTTAT+GGG | + | chr8_1:61298473-61298492 | Msa1205160:intron | 30.0% | |
| AAGCAACTAAAATCAAACCT+TGG | - | chr8_1:61298601-61298620 | None:intergenic | 30.0% | |
| GGATGTGGTTTCTAATAATT+TGG | + | chr8_1:61299074-61299093 | Msa1205160:intron | 30.0% | |
| ! | TGAATTGATTTAGTTGCTAG+GGG | + | chr8_1:61299337-61299356 | Msa1205160:three_prime_UTR | 30.0% |
| !! | TAATTTGCTTGCAATGACTT+TGG | + | chr8_1:61295706-61295725 | Msa1205160:intron | 30.0% |
| GCTAGAAATACTAGATTAGA+TGG | - | chr8_1:61295803-61295822 | None:intergenic | 30.0% | |
| !! | TAGCAAACAGTGTTTTAGAT+TGG | - | chr8_1:61299626-61299645 | None:intergenic | 30.0% |
| !!! | TCGTTGATCTTGTGTTGTTT+TGG | + | chr8_1:61294540-61294559 | Msa1205160:intron | 35.0% |
| GATGATTCAAAAACTCACCT+TGG | - | chr8_1:61294842-61294861 | None:intergenic | 35.0% | |
| !! | TGGTTGTTTCTGTTTCCTTT+AGG | + | chr8_1:61294922-61294941 | Msa1205160:intron | 35.0% |
| TGAAATTGCTCAAGACTTCA+AGG | + | chr8_1:61295251-61295270 | Msa1205160:CDS | 35.0% | |
| ! | ATATCTTGTTGGTCTGTTTG+AGG | + | chr8_1:61295432-61295451 | Msa1205160:CDS | 35.0% |
| AGTTGTCCATTACAATCCAA+AGG | - | chr8_1:61295772-61295791 | None:intergenic | 35.0% | |
| ! | AGCTACTTTCTTAAAACACG+CGG | + | chr8_1:61295852-61295871 | Msa1205160:intron | 35.0% |
| !! | AATTTCGCTTTAGAAACACG+CGG | + | chr8_1:61295919-61295938 | Msa1205160:intron | 35.0% |
| GTAGAACGAAAAGAAGGAAT+TGG | - | chr8_1:61295982-61296001 | None:intergenic | 35.0% | |
| ! | TCCTTCTTTTCGTTCTACTT+AGG | + | chr8_1:61295984-61296003 | Msa1205160:intron | 35.0% |
| ACCTAAGTAGAACGAAAAGA+AGG | - | chr8_1:61295988-61296007 | None:intergenic | 35.0% | |
| TAGCATAATAGACACGGAAT+GGG | - | chr8_1:61296278-61296297 | None:intergenic | 35.0% | |
| ATAGCATAATAGACACGGAA+TGG | - | chr8_1:61296279-61296298 | None:intergenic | 35.0% | |
| TCTTACTATGCATTCTCCAT+GGG | - | chr8_1:61296610-61296629 | None:intergenic | 35.0% | |
| TTCTTACTATGCATTCTCCA+TGG | - | chr8_1:61296611-61296630 | None:intergenic | 35.0% | |
| !! | ACTCTCTGAATTTGAGTTGA+AGG | + | chr8_1:61296636-61296655 | Msa1205160:intron | 35.0% |
| AACAAATTGGCACATCCAAT+CGG | - | chr8_1:61296669-61296688 | None:intergenic | 35.0% | |
| GAGTTTCAATTCAAAGGCAA+GGG | - | chr8_1:61297093-61297112 | None:intergenic | 35.0% | |
| AGAGTTTCAATTCAAAGGCA+AGG | - | chr8_1:61297094-61297113 | None:intergenic | 35.0% | |
| TGTAAGAGAAGTTTAGGAGT+TGG | - | chr8_1:61297151-61297170 | None:intergenic | 35.0% | |
| AATTGCACACTCGAAAACAA+AGG | - | chr8_1:61297487-61297506 | None:intergenic | 35.0% | |
| TCAAATCAACACATACATCG+TGG | - | chr8_1:61297617-61297636 | None:intergenic | 35.0% | |
| CATGTCTAATAAGAACCATG+TGG | + | chr8_1:61297644-61297663 | Msa1205160:intron | 35.0% | |
| TGAAGTCAATGAACTACGAA+AGG | + | chr8_1:61297721-61297740 | Msa1205160:intron | 35.0% | |
| CTTTCTCAGTTACGATCTAA+CGG | - | chr8_1:61297838-61297857 | None:intergenic | 35.0% | |
| !! | CTTTGATTTGAAAGGCGAAA+AGG | - | chr8_1:61297926-61297945 | None:intergenic | 35.0% |
| GAAACTCGTTAGCTGAAATT+TGG | - | chr8_1:61297965-61297984 | None:intergenic | 35.0% | |
| ! | GTTTATAGCTTCTGTGCTTT+TGG | + | chr8_1:61298050-61298069 | Msa1205160:intron | 35.0% |
| CATCTCCGATTTACGAAATT+AGG | + | chr8_1:61298131-61298150 | Msa1205160:intron | 35.0% | |
| ACGAATTCGCTGTATGTATT+TGG | + | chr8_1:61298158-61298177 | Msa1205160:intron | 35.0% | |
| ! | GTTACATTCATCCACGTTTT+AGG | + | chr8_1:61298347-61298366 | Msa1205160:intron | 35.0% |
| TTCTTCTCTTTCCTAAAACG+TGG | - | chr8_1:61298361-61298380 | None:intergenic | 35.0% | |
| CTTATCTGGGTTTATGTAGA+TGG | + | chr8_1:61298512-61298531 | Msa1205160:intron | 35.0% | |
| ATTCATGATCAGTGTAGTCA+AGG | + | chr8_1:61299053-61299072 | Msa1205160:intron | 35.0% | |
| ! | ATATCTTGTTGGTCTCTTTG+AGG | + | chr8_1:61299165-61299184 | Msa1205160:CDS | 35.0% |
| CTAGATTAGATGGCAACAAA+AGG | - | chr8_1:61299522-61299541 | None:intergenic | 35.0% | |
| ! | TGTGCATATTCGTTTGGAAT+TGG | + | chr8_1:61299555-61299574 | Msa1205160:three_prime_UTR | 35.0% |
| ! | GTGCATATTCGTTTGGAATT+GGG | + | chr8_1:61299556-61299575 | Msa1205160:three_prime_UTR | 35.0% |
| GCTTTCTTCTTCTTCTCTTC+AGG | - | chr8_1:61294133-61294152 | None:intergenic | 40.0% | |
| TTCTTAACTCCACCAGTAGT+GGG | - | chr8_1:61294965-61294984 | None:intergenic | 40.0% | |
| TTTCTTAACTCCACCAGTAG+TGG | - | chr8_1:61294966-61294985 | None:intergenic | 40.0% | |
| TAATAGTAACTCGCTTGGCA+TGG | - | chr8_1:61295477-61295496 | None:intergenic | 40.0% | |
| CATCTAAACAGCACCAAACA+CGG | - | chr8_1:61295558-61295577 | None:intergenic | 40.0% | |
| !! | GTGTTTGGTGCTGTTTAGAT+GGG | + | chr8_1:61295557-61295576 | Msa1205160:intron | 40.0% |
| TGTCCATTACAATCCAAAGG+TGG | - | chr8_1:61295769-61295788 | None:intergenic | 40.0% | |
| !! | AAAAAGGGTACCGTCTCAAT+TGG | + | chr8_1:61296189-61296208 | Msa1205160:intron | 40.0% |
| !! | AAAAGGGTACCGTCTCAATT+GGG | + | chr8_1:61296190-61296209 | Msa1205160:intron | 40.0% |
| GTGTTTAGTCCCAATTGAGA+CGG | - | chr8_1:61296202-61296221 | None:intergenic | 40.0% | |
| ! | CTGCATGTACCTAGAGTTTT+GGG | - | chr8_1:61296405-61296424 | None:intergenic | 40.0% |
| TAGGTACATGCAGCCTTTAA+TGG | + | chr8_1:61296412-61296431 | Msa1205160:intron | 40.0% | |
| AACACATTTGTAGCTTCCCA+TGG | + | chr8_1:61296591-61296610 | Msa1205160:intron | 40.0% | |
| !! | GATGTGCCAATTTGTTGACA+AGG | + | chr8_1:61296673-61296692 | Msa1205160:intron | 40.0% |
| AATGCAAGAAACGTGCAAAG+TGG | + | chr8_1:61296781-61296800 | Msa1205160:intron | 40.0% | |
| ! | GAAGGGTGTAAGAGAAGTTT+AGG | - | chr8_1:61297157-61297176 | None:intergenic | 40.0% |
| ! | ATCGTAACTGAGAAAGCACA+CGG | + | chr8_1:61297842-61297861 | Msa1205160:intron | 40.0% |
| TTTGAAAGGCGAAAAGGTGA+AGG | - | chr8_1:61297920-61297939 | None:intergenic | 40.0% | |
| TTCTTAACTCCACCAGTAGT+TGG | - | chr8_1:61294965-61294984 | None:intergenic | 40.0% | |
| TGAAATTGCTCAGGACTTCA+AGG | + | chr8_1:61298992-61299011 | Msa1205160:CDS | 40.0% | |
| TAATAGTAACTCGCTTGGCA+TGG | - | chr8_1:61295477-61295496 | None:intergenic | 40.0% | |
| !!! | TGCTTTTGGTGCTGTTTAGA+TGG | + | chr8_1:61299289-61299308 | Msa1205160:three_prime_UTR | 40.0% |
| !!! | GCTTTTGGTGCTGTTTAGAT+GGG | + | chr8_1:61299290-61299309 | Msa1205160:three_prime_UTR | 40.0% |
| CCACAAAATAAAACGCAGAG+TGG | - | chr8_1:61299495-61299514 | None:intergenic | 40.0% | |
| !!! | CCACTCTGCGTTTTATTTTG+TGG | + | chr8_1:61299492-61299511 | Msa1205160:three_prime_UTR | 40.0% |
| AGCTTCTGTGCATATTCGTT+TGG | + | chr8_1:61299549-61299568 | Msa1205160:three_prime_UTR | 40.0% | |
| ! | AGACTTACGAGCAGTTTGCT+TGG | - | chr8_1:61294785-61294804 | None:intergenic | 45.0% |
| CAAACTGCTCGTAAGTCTAC+TGG | + | chr8_1:61294787-61294806 | Msa1205160:CDS | 45.0% | |
| TCGTAAGTCTACTGGTGGAA+AGG | + | chr8_1:61294795-61294814 | Msa1205160:CDS | 45.0% | |
| TTGGTTGCAAGTTGCTTCCT+AGG | - | chr8_1:61294823-61294842 | None:intergenic | 45.0% | |
| TAGGAAGCAACTTGCAACCA+AGG | + | chr8_1:61294822-61294841 | Msa1205160:CDS | 45.0% | |
| !! | AGAGTACTGAGCTCTTGATC+AGG | + | chr8_1:61295202-61295221 | Msa1205160:CDS | 45.0% |
| CAATTTCACGAACCAACCTC+TGG | - | chr8_1:61295239-61295258 | None:intergenic | 45.0% | |
| GGGCATAATAGTAACTCGCT+TGG | - | chr8_1:61295482-61295501 | None:intergenic | 45.0% | |
| GCGAGTTACTATTATGCCCA+AGG | + | chr8_1:61295483-61295502 | Msa1205160:intron | 45.0% | |
| !! | CGTGTTTGGTGCTGTTTAGA+TGG | + | chr8_1:61295556-61295575 | Msa1205160:intron | 45.0% |
| !! | TTTGGTGCTGTTTAGATGGG+TGG | + | chr8_1:61295560-61295579 | Msa1205160:intron | 45.0% |
| CAGCCACCTTTGGATTGTAA+TGG | + | chr8_1:61295763-61295782 | Msa1205160:intron | 45.0% | |
| AAACACGCGGATTTCACTTC+TGG | + | chr8_1:61295932-61295951 | Msa1205160:intron | 45.0% | |
| !!! | GTACCTAGAGTTTTGGGTCT+GGG | - | chr8_1:61296399-61296418 | None:intergenic | 45.0% |
| !!! | TGTACCTAGAGTTTTGGGTC+TGG | - | chr8_1:61296400-61296419 | None:intergenic | 45.0% |
| ! | GCTGCATGTACCTAGAGTTT+TGG | - | chr8_1:61296406-61296425 | None:intergenic | 45.0% |
| ACTCTGGGTAAATGAACCTC+TGG | + | chr8_1:61296475-61296494 | Msa1205160:intron | 45.0% | |
| CGTCAAAGTAGTGCTCGAAA+AGG | - | chr8_1:61297417-61297436 | None:intergenic | 45.0% | |
| CATCACTTTCACTTCCCACA+TGG | - | chr8_1:61297662-61297681 | None:intergenic | 45.0% | |
| TCTATTAATGGGGGCAACAC+TGG | - | chr8_1:61297804-61297823 | None:intergenic | 45.0% | |
| TGACTTACGAGCTGTTTGCT+TGG | - | chr8_1:61298544-61298563 | None:intergenic | 45.0% | |
| CAAACAGCTCGTAAGTCAAC+CGG | + | chr8_1:61298546-61298565 | Msa1205160:CDS | 45.0% | |
| TTGGTTGCAAGTTGCTTCCT+TGG | - | chr8_1:61294823-61294842 | None:intergenic | 45.0% | |
| AAGGAAGCAACTTGCAACCA+AGG | + | chr8_1:61298581-61298600 | Msa1205160:CDS | 45.0% | |
| CAATTTCACGAACCAACCTC+TGG | - | chr8_1:61295239-61295258 | None:intergenic | 45.0% | |
| !! | GTTGGTTCGTGAAATTGCTC+AGG | + | chr8_1:61295242-61295261 | Msa1205160:CDS | 45.0% |
| GATCAGTGTAGTCAAGGATG+TGG | + | chr8_1:61299059-61299078 | Msa1205160:intron | 45.0% | |
| GGGCATAATAGTAACTCGCT+TGG | - | chr8_1:61295482-61295501 | None:intergenic | 45.0% | |
| GCGAGTTACTATTATGCCCA+AGG | + | chr8_1:61295483-61295502 | Msa1205160:intron | 45.0% | |
| !! | TTTGGTGCTGTTTAGATGGG+TGG | + | chr8_1:61295560-61295579 | Msa1205160:intron | 45.0% |
| !!! | TTTTTTCATAATTATTTAAT+CGG | + | chr8_1:61296138-61296157 | Msa1205160:intron | 5.0% |
| !!! | TAATACTTTTTATATAAAAA+AGG | + | chr8_1:61296173-61296192 | Msa1205160:intron | 5.0% |
| !!! | AATACTTTTTATATAAAAAA+GGG | + | chr8_1:61296174-61296193 | Msa1205160:intron | 5.0% |
| ACTGCTCGTAAGTCTACTGG+TGG | + | chr8_1:61294790-61294809 | Msa1205160:CDS | 50.0% | |
| CAGACTTACGTGCAGCCTAA+AGG | - | chr8_1:61294940-61294959 | None:intergenic | 50.0% | |
| TCACCGAAGAGCAACAGTTC+CGG | - | chr8_1:61295005-61295024 | None:intergenic | 50.0% | |
| ! | TCACGAACCAACCTCTGGAA+GGG | - | chr8_1:61295234-61295253 | None:intergenic | 50.0% |
| TTCACGAACCAACCTCTGGA+AGG | - | chr8_1:61295235-61295254 | None:intergenic | 50.0% | |
| ! | CAGCATGACTCTGGAAACGA+AGG | - | chr8_1:61295384-61295403 | None:intergenic | 50.0% |
| ATGCAAGCACAGCATGACTC+TGG | - | chr8_1:61295393-61295412 | None:intergenic | 50.0% | |
| TGCTGTGCTTGCATTGCAAG+AGG | + | chr8_1:61295399-61295418 | Msa1205160:CDS | 50.0% | |
| GCTGCTGAGGCATATCTTGT+TGG | + | chr8_1:61295421-61295440 | Msa1205160:CDS | 50.0% | |
| TATGCCCAAGGACATCCAGT+TGG | + | chr8_1:61295495-61295514 | Msa1205160:intron | 50.0% | |
| CTTGCCAACTGGATGTCCTT+GGG | - | chr8_1:61295502-61295521 | None:intergenic | 50.0% | |
| CTTAAGGAGGATGCCGTGTT+TGG | + | chr8_1:61295542-61295561 | Msa1205160:intron | 50.0% | |
| TTTGGGTATGCAGCCACCTT+TGG | + | chr8_1:61295753-61295772 | Msa1205160:intron | 50.0% | |
| ! | GTTCGTTGAGGTGTCTACAC+AGG | - | chr8_1:61296056-61296075 | None:intergenic | 50.0% |
| GACACCTCAACGAACTCATG+TGG | + | chr8_1:61296061-61296080 | Msa1205160:intron | 50.0% | |
| GTGTCCACATGAGTTCGTTG+AGG | - | chr8_1:61296068-61296087 | None:intergenic | 50.0% | |
| ATGCCCAGACCCAAAACTCT+AGG | + | chr8_1:61296393-61296412 | Msa1205160:intron | 50.0% | |
| CTGGGTAAATGAACCTCTGG+TGG | + | chr8_1:61296478-61296497 | Msa1205160:intron | 50.0% | |
| !! | GTTGAAGGTGCTTGTCCGAT+TGG | + | chr8_1:61296651-61296670 | Msa1205160:intron | 50.0% |
| ACGCAGGATTGTTGCACATG+TGG | + | chr8_1:61297341-61297360 | Msa1205160:intron | 50.0% | |
| TCGTAAGTCAACCGGTGGTA+AGG | + | chr8_1:61298554-61298573 | Msa1205160:CDS | 50.0% | |
| TGCGTGCAGCCTAAAGGTAA+GGG | - | chr8_1:61298699-61298718 | None:intergenic | 50.0% | |
| TTGCGTGCAGCCTAAAGGTA+AGG | - | chr8_1:61298700-61298719 | None:intergenic | 50.0% | |
| AAGTCTGCACCAACTACTGG+TGG | + | chr8_1:61298718-61298737 | Msa1205160:CDS | 50.0% | |
| ACCGAAGAGCAACAGTTCCT+GGG | - | chr8_1:61298768-61298787 | None:intergenic | 50.0% | |
| TCAAGAGCTCGGTACTCTTC+TGG | - | chr8_1:61298941-61298960 | None:intergenic | 50.0% | |
| !! | AGAGTACCGAGCTCTTGATC+AGG | + | chr8_1:61298943-61298962 | Msa1205160:CDS | 50.0% |
| GAGCTTCCTGATCAAGAGCT+CGG | - | chr8_1:61295211-61295230 | None:intergenic | 50.0% | |
| !! | CACGAACCAACCTCTGGAAT+GGG | - | chr8_1:61298974-61298993 | None:intergenic | 50.0% |
| ! | TCACGAACCAACCTCTGGAA+TGG | - | chr8_1:61295234-61295253 | None:intergenic | 50.0% |
| ! | CAGCATGACTCTGGAAACGA+AGG | - | chr8_1:61295384-61295403 | None:intergenic | 50.0% |
| ATGCAAGCACAGCATGACTC+TGG | - | chr8_1:61295393-61295412 | None:intergenic | 50.0% | |
| TGCTGTGCTTGCATTGCAAG+AGG | + | chr8_1:61295399-61295418 | Msa1205160:CDS | 50.0% | |
| GCTGCTGAGGCATATCTTGT+TGG | + | chr8_1:61295421-61295440 | Msa1205160:CDS | 50.0% | |
| TATGCCCAAGGACATCCAGT+TGG | + | chr8_1:61295495-61295514 | Msa1205160:intron | 50.0% | |
| CTTGCCAACTGGATGTCCTT+GGG | - | chr8_1:61295502-61295521 | None:intergenic | 50.0% | |
| CCAAAAGCAGCATCCTCCTT+AGG | - | chr8_1:61299278-61299297 | None:intergenic | 50.0% | |
| !!! | CCTAAGGAGGATGCTGCTTT+TGG | + | chr8_1:61299275-61299294 | Msa1205160:exon | 50.0% |
| !! | CTACTGGTGGAAAGGCACCT+AGG | + | chr8_1:61294803-61294822 | Msa1205160:CDS | 55.0% |
| CGTAAGTCTGCTCCCACTAC+TGG | + | chr8_1:61294950-61294969 | Msa1205160:CDS | 55.0% | |
| AAGTCTGCTCCCACTACTGG+TGG | + | chr8_1:61294953-61294972 | Msa1205160:CDS | 55.0% | |
| AAACCACATCGTTACCGCCC+CGG | + | chr8_1:61294983-61295002 | Msa1205160:CDS | 55.0% | |
| ACCGAAGAGCAACAGTTCCG+GGG | - | chr8_1:61295003-61295022 | None:intergenic | 55.0% | |
| CACCGAAGAGCAACAGTTCC+GGG | - | chr8_1:61295004-61295023 | None:intergenic | 55.0% | |
| ! | CACGAACCAACCTCTGGAAG+GGG | - | chr8_1:61295233-61295252 | None:intergenic | 55.0% |
| TGCATTGCAAGAGGCTGCTG+AGG | + | chr8_1:61295408-61295427 | Msa1205160:CDS | 55.0% | |
| CCTTGCCAACTGGATGTCCT+TGG | - | chr8_1:61295503-61295522 | None:intergenic | 55.0% | |
| CCAAGGACATCCAGTTGGCA+AGG | + | chr8_1:61295500-61295519 | Msa1205160:intron | 55.0% | |
| AGGACATCCAGTTGGCAAGG+AGG | + | chr8_1:61295503-61295522 | Msa1205160:intron | 55.0% | |
| ATCCGTGGTGAGCGTGCTTA+AGG | + | chr8_1:61295526-61295545 | Msa1205160:intron | 55.0% | |
| CTCCTTAAGCACGCTCACCA+CGG | - | chr8_1:61295531-61295550 | None:intergenic | 55.0% | |
| GCAAACGAGACATCCACCAG+AGG | - | chr8_1:61296494-61296513 | None:intergenic | 55.0% | |
| GGATAGTGTCTCGTAGCCGT+TGG | + | chr8_1:61297863-61297882 | Msa1205160:intron | 55.0% | |
| ! | CGTGTCGGTCAGAGATCCAA+CGG | - | chr8_1:61297882-61297901 | None:intergenic | 55.0% |
| ACAGCTCGTAAGTCAACCGG+TGG | + | chr8_1:61298549-61298568 | Msa1205160:CDS | 55.0% | |
| !! | CTTCCTTGGTGCCTTACCAC+CGG | - | chr8_1:61298568-61298587 | None:intergenic | 55.0% |
| CAGACTTGCGTGCAGCCTAA+AGG | - | chr8_1:61298705-61298724 | None:intergenic | 55.0% | |
| CGCAAGTCTGCACCAACTAC+TGG | + | chr8_1:61298715-61298734 | Msa1205160:CDS | 55.0% | |
| AAGCCACATCGTTATCGCCC+AGG | + | chr8_1:61298748-61298767 | Msa1205160:CDS | 55.0% | |
| GTTCCTGGGCGATAACGATG+TGG | - | chr8_1:61298754-61298773 | None:intergenic | 55.0% | |
| GCCCAGGAACTGTTGCTCTT+CGG | + | chr8_1:61298764-61298783 | Msa1205160:CDS | 55.0% | |
| CACCGAAGAGCAACAGTTCC+TGG | - | chr8_1:61295004-61295023 | None:intergenic | 55.0% | |
| TCAGGAAGCTCCCATTCCAG+AGG | + | chr8_1:61298961-61298980 | Msa1205160:CDS | 55.0% | |
| GAAGCTCCCATTCCAGAGGT+TGG | + | chr8_1:61298965-61298984 | Msa1205160:CDS | 55.0% | |
| TGCATTGCAAGAGGCTGCTG+AGG | + | chr8_1:61295408-61295427 | Msa1205160:CDS | 55.0% | |
| CCTTGCCAACTGGATGTCCT+TGG | - | chr8_1:61295503-61295522 | None:intergenic | 55.0% | |
| CCAAGGACATCCAGTTGGCA+AGG | + | chr8_1:61295500-61295519 | Msa1205160:intron | 55.0% | |
| AGGACATCCAGTTGGCAAGG+AGG | + | chr8_1:61295503-61295522 | Msa1205160:intron | 55.0% | |
| GAAGAGCAACAGTTCCGGGG+CGG | - | chr8_1:61295000-61295019 | None:intergenic | 60.0% | |
| GCCCCGGAACTGTTGCTCTT+CGG | + | chr8_1:61294999-61295018 | Msa1205160:CDS | 60.0% | |
| TCAGGAAGCTCCCCTTCCAG+AGG | + | chr8_1:61295220-61295239 | Msa1205160:CDS | 60.0% | |
| GAAGCTCCCCTTCCAGAGGT+TGG | + | chr8_1:61295224-61295243 | Msa1205160:CDS | 60.0% | |
| CACGGATCCTCCTTGCCAAC+TGG | - | chr8_1:61295513-61295532 | None:intergenic | 60.0% | |
| CAGTTGGCAAGGAGGATCCG+TGG | + | chr8_1:61295511-61295530 | Msa1205160:intron | 60.0% | |
| CGTGGTGAGCGTGCTTAAGG+AGG | + | chr8_1:61295529-61295548 | Msa1205160:intron | 60.0% | |
| ! | CAACCGGTGGTAAGGCACCA+AGG | + | chr8_1:61298562-61298581 | Msa1205160:CDS | 60.0% |
| CACGGATCCTCCTTGCCAAC+TGG | - | chr8_1:61295513-61295532 | None:intergenic | 60.0% | |
| CAGTTGGCAAGGAGGATCCG+TGG | + | chr8_1:61295511-61295530 | Msa1205160:intron | 60.0% | |
| GTTCCGGGGCGGTAACGATG+TGG | - | chr8_1:61294989-61295008 | None:intergenic | 65.0% | |
| ATCCGTGGTGAGCGCGCCTA+AGG | + | chr8_1:61299259-61299278 | Msa1205160:CDS | 65.0% | |
| CTCCTTAGGCGCGCTCACCA+CGG | - | chr8_1:61299264-61299283 | None:intergenic | 65.0% | |
| CGTGGTGAGCGCGCCTAAGG+AGG | + | chr8_1:61299262-61299281 | Msa1205160:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 61294100 | 61299648 | 61294100 | ID=Msa1205160;Name=Msa1205160 |
| chr8_1 | mRNA | 61294100 | 61299648 | 61294100 | ID=Msa1205160-mRNA-1;Parent=Msa1205160;Name=Msa1205160-mRNA-1;_AED=0.22;_eAED=0.22;_QI=65|0.87|0.88|1|0.87|0.88|9|369|253 |
| chr8_1 | exon | 61294100 | 61294164 | 61294100 | ID=Msa1205160-mRNA-1:exon:19889;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61294772 | 61294843 | 61294772 | ID=Msa1205160-mRNA-1:exon:19890;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61294944 | 61295020 | 61294944 | ID=Msa1205160-mRNA-1:exon:19891;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61295182 | 61295272 | 61295182 | ID=Msa1205160-mRNA-1:exon:19892;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61295376 | 61295486 | 61295376 | ID=Msa1205160-mRNA-1:exon:19893;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61298531 | 61298602 | 61298531 | ID=Msa1205160-mRNA-1:exon:19894;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61298709 | 61298785 | 61298709 | ID=Msa1205160-mRNA-1:exon:19895;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61298923 | 61299013 | 61298923 | ID=Msa1205160-mRNA-1:exon:19896;Parent=Msa1205160-mRNA-1 |
| chr8_1 | exon | 61299109 | 61299648 | 61299109 | ID=Msa1205160-mRNA-1:exon:19897;Parent=Msa1205160-mRNA-1 |
| chr8_1 | five_prime_UTR | 61294100 | 61294164 | 61294100 | ID=Msa1205160-mRNA-1:five_prime_utr;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61294772 | 61294843 | 61294772 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61294944 | 61295020 | 61294944 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61295182 | 61295272 | 61295182 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61295376 | 61295486 | 61295376 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61298531 | 61298602 | 61298531 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61298709 | 61298785 | 61298709 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61298923 | 61299013 | 61298923 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | CDS | 61299109 | 61299279 | 61299109 | ID=Msa1205160-mRNA-1:cds;Parent=Msa1205160-mRNA-1 |
| chr8_1 | three_prime_UTR | 61299280 | 61299648 | 61299280 | ID=Msa1205160-mRNA-1:three_prime_utr;Parent=Msa1205160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
