Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329230 | ESR53738.1 | 87.500 | 64 | 8 | 0 | 1 | 64 | 1 | 64 | 4.63e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329230 | sp|Q38838|AGL14_ARATH | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 6.54e-35 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329230 | A0A4D9BM24 | 93.443 | 61 | 4 | 0 | 1 | 61 | 1 | 61 | 1.31e-33 | 119 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1329230 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1185290 | Msa1329230 | 0.837687 | 4.487126e-57 | -8.615850e-47 |
| Msa1185320 | Msa1329230 | 0.818536 | 1.862737e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329230 | MtrunA17_Chr8g0351041 | 95.000 | 60 | 3 | 0 | 1 | 60 | 1 | 60 | 4.84e-36 | 119 |
| Msa1329230 | MtrunA17_Chr8g0351031 | 93.333 | 60 | 4 | 0 | 1 | 60 | 1 | 60 | 7.07e-35 | 118 |
| Msa1329230 | MtrunA17_Chr7g0246431 | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 8.06e-35 | 117 |
| Msa1329230 | MtrunA17_Chr4g0057151 | 67.073 | 82 | 24 | 1 | 1 | 79 | 1 | 82 | 1.99e-31 | 108 |
| Msa1329230 | MtrunA17_Chr7g0246381 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 3.43e-28 | 96.7 |
| Msa1329230 | MtrunA17_Chr4g0061671 | 57.692 | 78 | 29 | 1 | 1 | 74 | 1 | 78 | 1.49e-27 | 98.2 |
| Msa1329230 | MtrunA17_Chr8g0377561 | 72.414 | 58 | 16 | 0 | 1 | 58 | 1 | 58 | 1.21e-26 | 93.6 |
| Msa1329230 | MtrunA17_Chr3g0077501 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 1.29e-26 | 96.7 |
| Msa1329230 | MtrunA17_Chr3g0097101 | 73.333 | 60 | 16 | 0 | 1 | 60 | 16 | 75 | 2.18e-26 | 96.7 |
| Msa1329230 | MtrunA17_Chr8g0380021 | 75.862 | 58 | 14 | 0 | 3 | 60 | 19 | 76 | 2.61e-26 | 96.7 |
| Msa1329230 | MtrunA17_Chr2g0284911 | 75.862 | 58 | 14 | 0 | 3 | 60 | 18 | 75 | 2.94e-26 | 96.7 |
| Msa1329230 | MtrunA17_Chr2g0308251 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 4.04e-26 | 91.7 |
| Msa1329230 | MtrunA17_Chr5g0420091 | 66.154 | 65 | 22 | 0 | 1 | 65 | 1 | 65 | 4.54e-26 | 95.1 |
| Msa1329230 | MtrunA17_Chr1g0173161 | 68.852 | 61 | 19 | 0 | 1 | 61 | 1 | 61 | 2.05e-25 | 89.7 |
| Msa1329230 | MtrunA17_Chr3g0122251 | 69.231 | 65 | 20 | 0 | 1 | 65 | 1 | 65 | 4.28e-25 | 93.6 |
| Msa1329230 | MtrunA17_Chr5g0427921 | 65.574 | 61 | 21 | 0 | 1 | 61 | 1 | 61 | 4.31e-25 | 88.2 |
| Msa1329230 | MtrunA17_Chr8g0351051 | 74.576 | 59 | 15 | 0 | 1 | 59 | 1 | 59 | 7.67e-25 | 92.8 |
| Msa1329230 | MtrunA17_Chr6g0474371 | 67.692 | 65 | 21 | 0 | 1 | 65 | 1 | 65 | 8.93e-25 | 91.3 |
| Msa1329230 | MtrunA17_Chr4g0020221 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 1.09e-24 | 92.4 |
| Msa1329230 | MtrunA17_Chr6g0455511 | 69.231 | 65 | 20 | 0 | 1 | 65 | 1 | 65 | 1.64e-24 | 92.0 |
| Msa1329230 | MtrunA17_Chr8g0366231 | 66.667 | 66 | 22 | 0 | 1 | 66 | 1 | 66 | 1.93e-24 | 91.7 |
| Msa1329230 | MtrunA17_Chr4g0061691 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 2.05e-24 | 91.3 |
| Msa1329230 | MtrunA17_Chr7g0220111 | 67.692 | 65 | 21 | 0 | 1 | 65 | 1 | 65 | 8.29e-24 | 90.1 |
| Msa1329230 | MtrunA17_Chr5g0427401 | 52.500 | 80 | 29 | 1 | 1 | 80 | 1 | 71 | 2.11e-23 | 88.6 |
| Msa1329230 | MtrunA17_Chr2g0279821 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 3.00e-23 | 88.6 |
| Msa1329230 | MtrunA17_Chr5g0412461 | 59.211 | 76 | 29 | 1 | 1 | 74 | 1 | 76 | 3.43e-23 | 88.2 |
| Msa1329230 | MtrunA17_Chr5g0412271 | 59.211 | 76 | 29 | 1 | 1 | 74 | 1 | 76 | 3.65e-23 | 88.2 |
| Msa1329230 | MtrunA17_Chr3g0142191 | 67.797 | 59 | 19 | 0 | 1 | 59 | 1 | 59 | 3.93e-23 | 87.8 |
| Msa1329230 | MtrunA17_Chr4g0018421 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 6.59e-23 | 86.7 |
| Msa1329230 | MtrunA17_Chr5g0425191 | 61.290 | 62 | 24 | 0 | 1 | 62 | 1 | 62 | 2.19e-22 | 82.8 |
| Msa1329230 | MtrunA17_Chr1g0159661 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 2.74e-22 | 84.7 |
| Msa1329230 | MtrunA17_Chr4g0044071 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 3.45e-22 | 82.4 |
| Msa1329230 | MtrunA17_Chr3g0125241 | 61.017 | 59 | 23 | 0 | 1 | 59 | 26 | 84 | 7.75e-22 | 84.0 |
| Msa1329230 | MtrunA17_Chr5g0420081 | 65.000 | 60 | 21 | 0 | 1 | 60 | 1 | 60 | 1.99e-21 | 83.6 |
| Msa1329230 | MtrunA17_Chr5g0411691 | 61.667 | 60 | 23 | 0 | 1 | 60 | 1 | 60 | 2.13e-21 | 83.6 |
| Msa1329230 | MtrunA17_Chr4g0049541 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 2.27e-21 | 83.2 |
| Msa1329230 | MtrunA17_Chr7g0220121 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 4.58e-21 | 83.2 |
| Msa1329230 | MtrunA17_Chr1g0204111 | 70.000 | 60 | 18 | 0 | 1 | 60 | 17 | 76 | 4.96e-21 | 83.2 |
| Msa1329230 | MtrunA17_Chr4g0049901 | 65.000 | 60 | 21 | 0 | 1 | 60 | 27 | 86 | 2.15e-20 | 80.9 |
| Msa1329230 | MtrunA17_Chr3g0134451 | 63.492 | 63 | 23 | 0 | 1 | 63 | 1 | 63 | 3.63e-20 | 81.6 |
| Msa1329230 | MtrunA17_Chr1g0164791 | 60.000 | 60 | 24 | 0 | 1 | 60 | 1 | 60 | 3.81e-20 | 80.1 |
| Msa1329230 | MtrunA17_Chr5g0404951 | 61.017 | 59 | 23 | 0 | 1 | 59 | 1 | 59 | 4.58e-20 | 80.1 |
| Msa1329230 | MtrunA17_Chr1g0166611 | 63.793 | 58 | 20 | 1 | 13 | 69 | 17 | 74 | 1.75e-18 | 73.6 |
| Msa1329230 | MtrunA17_Chr8g0379021 | 57.143 | 56 | 24 | 0 | 3 | 58 | 13 | 68 | 7.08e-17 | 70.5 |
| Msa1329230 | MtrunA17_Chr1g0175611 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 2.66e-16 | 68.9 |
| Msa1329230 | MtrunA17_Chr4g0052081 | 49.275 | 69 | 31 | 1 | 1 | 69 | 1 | 65 | 2.87e-16 | 68.9 |
| Msa1329230 | MtrunA17_Chr2g0292791 | 60.714 | 56 | 22 | 0 | 3 | 58 | 10 | 65 | 4.41e-16 | 69.7 |
| Msa1329230 | MtrunA17_Chr1g0180591 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 6.87e-16 | 68.2 |
| Msa1329230 | MtrunA17_Chr1g0175601 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 1.21e-15 | 67.4 |
| Msa1329230 | MtrunA17_Chr8g0376821 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 1.44e-15 | 67.4 |
| Msa1329230 | MtrunA17_Chr1g0208561 | 57.143 | 56 | 24 | 0 | 3 | 58 | 10 | 65 | 1.63e-15 | 68.2 |
| Msa1329230 | MtrunA17_Chr3g0089141 | 57.143 | 56 | 24 | 0 | 3 | 58 | 10 | 65 | 1.71e-15 | 67.8 |
| Msa1329230 | MtrunA17_Chr1g0169761 | 53.448 | 58 | 27 | 0 | 1 | 58 | 1 | 58 | 3.71e-15 | 66.2 |
| Msa1329230 | MtrunA17_Chr5g0417661 | 51.923 | 52 | 25 | 0 | 1 | 52 | 56 | 107 | 4.00e-15 | 65.1 |
| Msa1329230 | MtrunA17_Chr4g0052061 | 47.826 | 69 | 32 | 1 | 1 | 69 | 1 | 65 | 4.50e-15 | 65.5 |
| Msa1329230 | MtrunA17_Chr2g0333981 | 43.750 | 80 | 36 | 1 | 1 | 80 | 11 | 81 | 7.33e-15 | 65.5 |
| Msa1329230 | MtrunA17_Chr3g0099411 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 8.01e-15 | 65.9 |
| Msa1329230 | MtrunA17_Chr1g0149391 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 9.47e-15 | 66.2 |
| Msa1329230 | MtrunA17_Chr1g0206721 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 1.08e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr1g0208581 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 1.14e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr8g0355091 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 1.14e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr5g0422421 | 58.929 | 56 | 23 | 0 | 3 | 58 | 10 | 65 | 1.18e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr1g0206701 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 1.22e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr1g0187361 | 57.143 | 56 | 24 | 0 | 3 | 58 | 10 | 65 | 1.38e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr1g0188671 | 57.143 | 56 | 24 | 0 | 3 | 58 | 48 | 103 | 1.69e-14 | 65.9 |
| Msa1329230 | MtrunA17_Chr3g0099421 | 58.929 | 56 | 23 | 0 | 3 | 58 | 35 | 90 | 1.90e-14 | 65.5 |
| Msa1329230 | MtrunA17_Chr5g0419601 | 64.583 | 48 | 17 | 0 | 3 | 50 | 10 | 57 | 2.34e-14 | 65.1 |
| Msa1329230 | MtrunA17_Chr8g0357771 | 51.724 | 58 | 28 | 0 | 1 | 58 | 1 | 58 | 2.37e-14 | 64.3 |
| Msa1329230 | MtrunA17_Chr4g0018951 | 66.667 | 45 | 15 | 0 | 14 | 58 | 24 | 68 | 2.73e-14 | 63.9 |
| Msa1329230 | MtrunA17_Chr4g0074101 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 2.89e-14 | 64.3 |
| Msa1329230 | MtrunA17_Chr2g0317481 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 4.10e-14 | 64.3 |
| Msa1329230 | MtrunA17_Chr2g0317451 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 4.19e-14 | 64.3 |
| Msa1329230 | MtrunA17_Chr2g0300421 | 53.571 | 56 | 26 | 0 | 3 | 58 | 10 | 65 | 5.45e-14 | 63.2 |
| Msa1329230 | MtrunA17_Chr4g0060841 | 53.846 | 52 | 24 | 0 | 1 | 52 | 1 | 52 | 5.60e-14 | 65.1 |
| Msa1329230 | MtrunA17_Chr2g0325971 | 55.357 | 56 | 25 | 0 | 3 | 58 | 10 | 65 | 9.63e-14 | 63.2 |
| Msa1329230 | MtrunA17_Chr1g0206991 | 60.417 | 48 | 19 | 0 | 3 | 50 | 10 | 57 | 1.28e-13 | 62.4 |
| Msa1329230 | MtrunA17_Chr5g0422941 | 53.571 | 56 | 26 | 0 | 3 | 58 | 10 | 65 | 2.76e-13 | 62.4 |
| Msa1329230 | MtrunA17_Chr3g0111841 | 54.902 | 51 | 23 | 0 | 8 | 58 | 2 | 52 | 3.96e-13 | 58.5 |
| Msa1329230 | MtrunA17_Chr8g0356071 | 38.372 | 86 | 40 | 2 | 1 | 77 | 1 | 82 | 2.11e-12 | 58.5 |
| Msa1329230 | MtrunA17_Chr3g0089151 | 50.000 | 56 | 28 | 0 | 3 | 58 | 10 | 65 | 4.20e-12 | 57.4 |
| Msa1329230 | MtrunA17_Chr6g0457851 | 40.000 | 65 | 39 | 0 | 1 | 65 | 11 | 75 | 9.94e-12 | 58.5 |
| Msa1329230 | MtrunA17_Chr3g0119901 | 56.250 | 48 | 21 | 0 | 3 | 50 | 10 | 57 | 1.40e-11 | 57.4 |
| Msa1329230 | MtrunA17_Chr1g0212151 | 40.000 | 65 | 39 | 0 | 1 | 65 | 1 | 65 | 2.25e-11 | 57.8 |
| Msa1329230 | MtrunA17_Chr1g0206691 | 65.000 | 40 | 14 | 0 | 11 | 50 | 1 | 40 | 2.51e-11 | 56.6 |
| Msa1329230 | MtrunA17_Chr2g0300441 | 50.000 | 54 | 27 | 0 | 5 | 58 | 12 | 65 | 2.77e-11 | 56.6 |
| Msa1329230 | MtrunA17_Chr3g0085241 | 56.250 | 48 | 21 | 0 | 3 | 50 | 42 | 89 | 2.96e-11 | 57.0 |
| Msa1329230 | MtrunA17_Chr4g0071601 | 59.091 | 44 | 18 | 0 | 15 | 58 | 25 | 68 | 4.10e-11 | 55.8 |
| Msa1329230 | MtrunA17_Chr6g0449851 | 48.000 | 50 | 26 | 0 | 1 | 50 | 1 | 50 | 5.18e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329230 | AT4G11880.2 | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 1.30e-36 | 121 |
| Msa1329230 | AT4G11880.3 | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 1.30e-36 | 121 |
| Msa1329230 | AT4G11880.4 | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 6.65e-36 | 120 |
| Msa1329230 | AT4G11880.1 | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 6.65e-36 | 120 |
| Msa1329230 | AT2G45660.2 | 90.000 | 60 | 6 | 0 | 1 | 60 | 1 | 60 | 8.99e-35 | 116 |
| Msa1329230 | AT2G45660.1 | 90.000 | 60 | 6 | 0 | 1 | 60 | 1 | 60 | 4.79e-34 | 115 |
| Msa1329230 | AT4G22950.2 | 86.667 | 60 | 8 | 0 | 1 | 60 | 1 | 60 | 1.79e-33 | 113 |
| Msa1329230 | AT4G22950.3 | 86.667 | 60 | 8 | 0 | 1 | 60 | 1 | 60 | 1.34e-32 | 112 |
| Msa1329230 | AT4G22950.1 | 86.667 | 60 | 8 | 0 | 1 | 60 | 1 | 60 | 1.34e-32 | 112 |
| Msa1329230 | AT5G62165.14 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 6.72e-31 | 104 |
| Msa1329230 | AT5G62165.17 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 9.70e-31 | 105 |
| Msa1329230 | AT5G62165.12 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 9.70e-31 | 105 |
| Msa1329230 | AT5G62165.11 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 9.70e-31 | 105 |
| Msa1329230 | AT5G62165.6 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 1.22e-30 | 105 |
| Msa1329230 | AT5G62165.9 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 1.22e-30 | 105 |
| Msa1329230 | AT5G62165.7 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 1.22e-30 | 105 |
| Msa1329230 | AT5G62165.8 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 1.22e-30 | 105 |
| Msa1329230 | AT5G62165.13 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 1.22e-30 | 105 |
| Msa1329230 | AT5G62165.10 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 4.77e-30 | 105 |
| Msa1329230 | AT5G62165.4 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 4.77e-30 | 105 |
| Msa1329230 | AT5G62165.3 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 5.77e-30 | 105 |
| Msa1329230 | AT5G62165.1 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 5.77e-30 | 105 |
| Msa1329230 | AT5G62165.2 | 63.415 | 82 | 21 | 1 | 1 | 73 | 1 | 82 | 5.77e-30 | 105 |
| Msa1329230 | AT4G09960.2 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 1.63e-27 | 99.4 |
| Msa1329230 | AT4G09960.1 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 2.50e-27 | 99.4 |
| Msa1329230 | AT4G09960.6 | 75.000 | 60 | 15 | 0 | 1 | 60 | 2 | 61 | 2.55e-27 | 99.4 |
| Msa1329230 | AT4G09960.5 | 75.000 | 60 | 15 | 0 | 1 | 60 | 11 | 70 | 3.33e-27 | 99.0 |
| Msa1329230 | AT5G51870.2 | 75.410 | 61 | 15 | 0 | 1 | 61 | 1 | 61 | 5.41e-27 | 96.7 |
| Msa1329230 | AT4G09960.3 | 75.000 | 60 | 15 | 0 | 1 | 60 | 27 | 86 | 6.68e-27 | 98.6 |
| Msa1329230 | AT5G51870.5 | 61.250 | 80 | 22 | 1 | 1 | 80 | 24 | 94 | 1.27e-26 | 96.7 |
| Msa1329230 | AT5G51870.1 | 61.250 | 80 | 22 | 1 | 1 | 80 | 1 | 71 | 1.32e-26 | 96.7 |
| Msa1329230 | AT3G58780.2 | 72.881 | 59 | 16 | 0 | 3 | 61 | 18 | 76 | 1.73e-26 | 97.4 |
| Msa1329230 | AT2G03710.3 | 71.667 | 60 | 17 | 0 | 1 | 60 | 1 | 60 | 2.05e-26 | 95.9 |
| Msa1329230 | AT5G51870.4 | 61.250 | 80 | 22 | 1 | 1 | 80 | 1 | 71 | 2.80e-26 | 96.3 |
| Msa1329230 | AT5G51870.3 | 61.250 | 80 | 22 | 1 | 1 | 80 | 11 | 81 | 3.19e-26 | 96.3 |
| Msa1329230 | AT5G51860.2 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 3.47e-26 | 95.5 |
| Msa1329230 | AT5G51860.1 | 75.000 | 60 | 15 | 0 | 1 | 60 | 1 | 60 | 4.58e-26 | 95.5 |
| Msa1329230 | AT1G24260.3 | 73.333 | 60 | 16 | 0 | 1 | 60 | 1 | 60 | 5.13e-26 | 95.9 |
| Msa1329230 | AT3G02310.2 | 67.692 | 65 | 21 | 0 | 1 | 65 | 1 | 65 | 6.26e-26 | 94.7 |
| Msa1329230 | AT2G03710.2 | 71.667 | 60 | 17 | 0 | 1 | 60 | 1 | 60 | 1.06e-25 | 95.5 |
| Msa1329230 | AT2G03710.1 | 71.667 | 60 | 17 | 0 | 1 | 60 | 1 | 60 | 1.09e-25 | 95.5 |
| Msa1329230 | AT5G15800.2 | 69.231 | 65 | 20 | 0 | 1 | 65 | 1 | 65 | 1.37e-25 | 95.5 |
| Msa1329230 | AT5G15800.1 | 69.231 | 65 | 20 | 0 | 1 | 65 | 1 | 65 | 1.40e-25 | 95.1 |
| Msa1329230 | AT3G02310.1 | 67.692 | 65 | 21 | 0 | 1 | 65 | 1 | 65 | 2.10e-25 | 94.7 |
| Msa1329230 | AT3G58780.4 | 72.414 | 58 | 16 | 0 | 3 | 60 | 18 | 75 | 2.66e-25 | 95.1 |
| Msa1329230 | AT3G61120.1 | 60.000 | 75 | 27 | 1 | 1 | 72 | 1 | 75 | 4.64e-25 | 93.6 |
| Msa1329230 | AT1G24260.1 | 69.841 | 63 | 19 | 0 | 1 | 63 | 1 | 63 | 5.20e-25 | 93.6 |
| Msa1329230 | AT1G24260.2 | 69.841 | 63 | 19 | 0 | 1 | 63 | 1 | 63 | 5.71e-25 | 93.6 |
| Msa1329230 | AT2G45650.1 | 76.271 | 59 | 14 | 0 | 1 | 59 | 1 | 59 | 7.05e-25 | 93.2 |
| Msa1329230 | AT5G13790.2 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 1.81e-24 | 92.8 |
| Msa1329230 | AT5G13790.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 1.81e-24 | 92.4 |
| Msa1329230 | AT5G60910.1 | 72.881 | 59 | 16 | 0 | 1 | 59 | 1 | 59 | 2.98e-24 | 91.7 |
| Msa1329230 | AT1G71692.1 | 67.797 | 59 | 19 | 0 | 1 | 59 | 1 | 59 | 1.01e-23 | 89.4 |
| Msa1329230 | AT3G57230.2 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 1.16e-23 | 87.4 |
| Msa1329230 | AT1G69120.2 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 1.43e-23 | 89.7 |
| Msa1329230 | AT3G58780.3 | 70.492 | 61 | 18 | 0 | 3 | 63 | 18 | 78 | 2.29e-23 | 89.7 |
| Msa1329230 | AT3G30260.1 | 69.492 | 59 | 18 | 0 | 1 | 59 | 1 | 59 | 2.73e-23 | 89.4 |
| Msa1329230 | AT2G14210.1 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 4.24e-23 | 88.2 |
| Msa1329230 | AT3G58780.1 | 72.414 | 58 | 16 | 0 | 3 | 60 | 18 | 75 | 4.57e-23 | 88.6 |
| Msa1329230 | AT4G09960.4 | 75.000 | 60 | 15 | 0 | 1 | 60 | 96 | 155 | 4.60e-23 | 89.7 |
| Msa1329230 | AT3G58780.5 | 72.414 | 58 | 16 | 0 | 3 | 60 | 24 | 81 | 4.76e-23 | 88.6 |
| Msa1329230 | AT2G14210.2 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 4.81e-23 | 88.2 |
| Msa1329230 | AT4G18960.1 | 74.138 | 58 | 15 | 0 | 3 | 60 | 19 | 76 | 6.13e-23 | 88.2 |
| Msa1329230 | AT3G57230.1 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 6.81e-23 | 87.8 |
| Msa1329230 | AT3G57230.4 | 68.333 | 60 | 19 | 0 | 1 | 60 | 1 | 60 | 6.81e-23 | 87.8 |
| Msa1329230 | AT2G42830.1 | 72.414 | 58 | 16 | 0 | 3 | 60 | 18 | 75 | 8.35e-23 | 87.8 |
| Msa1329230 | AT2G42830.2 | 72.414 | 58 | 16 | 0 | 3 | 60 | 18 | 75 | 1.02e-22 | 87.8 |
| Msa1329230 | AT2G22540.3 | 57.895 | 76 | 30 | 1 | 1 | 74 | 1 | 76 | 1.24e-22 | 87.4 |
| Msa1329230 | AT2G22540.1 | 57.895 | 76 | 30 | 1 | 1 | 74 | 1 | 76 | 1.24e-22 | 87.4 |
| Msa1329230 | AT3G54340.1 | 52.439 | 82 | 34 | 1 | 1 | 77 | 1 | 82 | 1.53e-22 | 87.0 |
| Msa1329230 | AT4G37940.3 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 1.89e-22 | 85.1 |
| Msa1329230 | AT4G37940.4 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 2.57e-22 | 85.9 |
| Msa1329230 | AT3G57390.3 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 2.70e-22 | 86.3 |
| Msa1329230 | AT4G37940.1 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 3.41e-22 | 85.9 |
| Msa1329230 | AT1G69120.1 | 64.615 | 65 | 23 | 0 | 1 | 65 | 1 | 65 | 3.93e-22 | 86.3 |
| Msa1329230 | AT3G57390.1 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 4.06e-22 | 86.3 |
| Msa1329230 | AT4G24540.1 | 67.213 | 61 | 20 | 0 | 1 | 61 | 1 | 61 | 8.79e-22 | 84.7 |
| Msa1329230 | AT1G26310.1 | 64.615 | 65 | 23 | 0 | 1 | 65 | 1 | 65 | 2.36e-21 | 84.3 |
| Msa1329230 | AT5G23260.3 | 59.701 | 67 | 26 | 1 | 1 | 66 | 1 | 67 | 2.39e-21 | 84.0 |
| Msa1329230 | AT5G23260.2 | 59.701 | 67 | 26 | 1 | 1 | 66 | 1 | 67 | 2.80e-21 | 84.0 |
| Msa1329230 | AT5G23260.4 | 59.701 | 67 | 26 | 1 | 1 | 66 | 17 | 83 | 8.42e-21 | 82.8 |
| Msa1329230 | AT5G23260.1 | 59.701 | 67 | 26 | 1 | 1 | 66 | 17 | 83 | 8.42e-21 | 82.8 |
| Msa1329230 | AT5G10140.2 | 52.500 | 80 | 30 | 1 | 1 | 80 | 1 | 72 | 8.46e-21 | 80.9 |
| Msa1329230 | AT5G10140.3 | 52.500 | 80 | 30 | 1 | 1 | 80 | 1 | 72 | 1.59e-20 | 80.5 |
| Msa1329230 | AT5G10140.4 | 52.500 | 80 | 30 | 1 | 1 | 80 | 1 | 72 | 1.72e-20 | 80.5 |
| Msa1329230 | AT5G10140.1 | 52.500 | 80 | 30 | 1 | 1 | 80 | 1 | 72 | 2.06e-20 | 80.5 |
| Msa1329230 | AT2G22630.1 | 63.333 | 60 | 22 | 0 | 1 | 60 | 1 | 60 | 2.69e-20 | 80.9 |
| Msa1329230 | AT2G22630.2 | 63.333 | 60 | 22 | 0 | 1 | 60 | 1 | 60 | 2.69e-20 | 80.9 |
| Msa1329230 | AT2G22540.2 | 54.054 | 74 | 31 | 1 | 1 | 74 | 1 | 71 | 5.30e-20 | 80.5 |
| Msa1329230 | AT5G20240.2 | 60.345 | 58 | 23 | 0 | 1 | 58 | 1 | 58 | 9.72e-20 | 77.8 |
| Msa1329230 | AT1G22130.1 | 60.317 | 63 | 25 | 0 | 1 | 63 | 1 | 63 | 1.44e-19 | 80.5 |
| Msa1329230 | AT1G77980.1 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 2.16e-19 | 80.1 |
| Msa1329230 | AT5G20240.1 | 61.404 | 57 | 22 | 0 | 1 | 57 | 1 | 57 | 4.51e-19 | 77.4 |
| Msa1329230 | AT5G65070.4 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 1.09e-18 | 75.1 |
| Msa1329230 | AT5G65070.1 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 5.09e-18 | 74.3 |
| Msa1329230 | AT5G65070.5 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 9.91e-18 | 73.9 |
| Msa1329230 | AT5G65050.2 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 1.06e-17 | 73.2 |
| Msa1329230 | AT5G65070.2 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 1.17e-17 | 73.9 |
| Msa1329230 | AT5G65050.1 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 2.09e-17 | 72.4 |
| Msa1329230 | AT5G65050.3 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 2.27e-17 | 72.8 |
| Msa1329230 | AT5G65050.5 | 51.515 | 66 | 32 | 0 | 1 | 66 | 1 | 66 | 2.60e-17 | 72.4 |
| Msa1329230 | AT5G65070.3 | 57.627 | 59 | 25 | 0 | 1 | 59 | 1 | 59 | 2.62e-17 | 73.2 |
| Msa1329230 | AT5G65060.3 | 50.000 | 66 | 33 | 0 | 1 | 66 | 1 | 66 | 1.11e-16 | 70.9 |
| Msa1329230 | AT1G77950.3 | 53.968 | 63 | 29 | 0 | 1 | 63 | 1 | 63 | 1.18e-16 | 71.6 |
| Msa1329230 | AT1G77950.2 | 53.968 | 63 | 29 | 0 | 1 | 63 | 1 | 63 | 1.18e-16 | 71.6 |
| Msa1329230 | AT1G77950.1 | 53.968 | 63 | 29 | 0 | 1 | 63 | 1 | 63 | 1.18e-16 | 71.6 |
| Msa1329230 | AT1G77950.4 | 53.968 | 63 | 29 | 0 | 1 | 63 | 1 | 63 | 1.18e-16 | 71.6 |
| Msa1329230 | AT5G65060.1 | 50.000 | 66 | 33 | 0 | 1 | 66 | 1 | 66 | 1.33e-16 | 70.9 |
| Msa1329230 | AT5G65060.2 | 50.000 | 66 | 33 | 0 | 1 | 66 | 1 | 66 | 1.34e-16 | 70.5 |
| Msa1329230 | AT4G37435.1 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 2.99e-15 | 67.0 |
| Msa1329230 | AT1G01530.1 | 55.357 | 56 | 25 | 0 | 3 | 58 | 8 | 63 | 3.32e-15 | 67.8 |
| Msa1329230 | AT1G31140.1 | 51.667 | 60 | 29 | 0 | 1 | 60 | 1 | 60 | 3.53e-15 | 67.4 |
| Msa1329230 | AT1G31140.2 | 51.667 | 60 | 29 | 0 | 1 | 60 | 1 | 60 | 3.71e-15 | 67.4 |
| Msa1329230 | AT3G66656.1 | 44.928 | 69 | 34 | 1 | 1 | 69 | 1 | 65 | 7.14e-15 | 65.9 |
| Msa1329230 | AT2G34440.1 | 55.769 | 52 | 23 | 0 | 1 | 52 | 1 | 52 | 7.60e-15 | 65.5 |
| Msa1329230 | AT5G65080.3 | 48.485 | 66 | 34 | 0 | 1 | 66 | 8 | 73 | 8.92e-15 | 65.9 |
| Msa1329230 | AT5G65080.2 | 49.206 | 63 | 32 | 0 | 1 | 63 | 8 | 70 | 1.08e-14 | 65.9 |
| Msa1329230 | AT1G18750.3 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 1.16e-14 | 67.4 |
| Msa1329230 | AT1G18750.4 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 1.27e-14 | 67.0 |
| Msa1329230 | AT1G18750.1 | 50.877 | 57 | 28 | 0 | 1 | 57 | 1 | 57 | 1.27e-14 | 67.0 |
| Msa1329230 | AT5G60440.1 | 55.357 | 56 | 25 | 0 | 3 | 58 | 8 | 63 | 1.23e-13 | 63.9 |
| Msa1329230 | AT2G03060.3 | 53.846 | 52 | 24 | 0 | 1 | 52 | 1 | 52 | 1.48e-13 | 64.3 |
| Msa1329230 | AT2G03060.7 | 53.846 | 52 | 24 | 0 | 1 | 52 | 1 | 52 | 1.48e-13 | 64.3 |
| Msa1329230 | AT2G03060.1 | 53.846 | 52 | 24 | 0 | 1 | 52 | 1 | 52 | 1.48e-13 | 64.3 |
| Msa1329230 | AT4G36590.1 | 57.143 | 56 | 24 | 0 | 3 | 58 | 8 | 63 | 1.66e-13 | 63.2 |
| Msa1329230 | AT2G03060.2 | 53.846 | 52 | 24 | 0 | 1 | 52 | 1 | 52 | 2.25e-13 | 63.5 |
| Msa1329230 | AT1G77080.11 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 2.52e-13 | 61.6 |
| Msa1329230 | AT1G77080.5 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 2.78e-13 | 61.6 |
| Msa1329230 | AT1G69540.2 | 51.923 | 52 | 25 | 0 | 1 | 52 | 1 | 52 | 3.34e-13 | 63.2 |
| Msa1329230 | AT1G77080.12 | 43.023 | 86 | 41 | 1 | 1 | 78 | 1 | 86 | 3.97e-13 | 60.8 |
| Msa1329230 | AT1G77080.4 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 4.95e-13 | 61.2 |
| Msa1329230 | AT1G69540.1 | 51.923 | 52 | 25 | 0 | 1 | 52 | 1 | 52 | 5.19e-13 | 62.4 |
| Msa1329230 | AT1G77080.2 | 43.023 | 86 | 41 | 1 | 1 | 78 | 1 | 86 | 7.51e-13 | 60.8 |
| Msa1329230 | AT2G24840.1 | 60.417 | 48 | 19 | 0 | 3 | 50 | 64 | 111 | 9.10e-13 | 61.6 |
| Msa1329230 | AT1G77080.8 | 53.030 | 66 | 31 | 0 | 1 | 66 | 1 | 66 | 1.15e-12 | 60.8 |
| Msa1329230 | AT1G72350.1 | 54.386 | 57 | 26 | 0 | 3 | 59 | 44 | 100 | 1.39e-12 | 60.5 |
| Msa1329230 | AT1G65360.1 | 48.214 | 56 | 29 | 0 | 3 | 58 | 8 | 63 | 2.43e-12 | 60.1 |
| Msa1329230 | AT2G26320.1 | 52.000 | 50 | 24 | 0 | 1 | 50 | 17 | 66 | 2.78e-11 | 55.1 |
| Msa1329230 | AT3G04100.1 | 46.296 | 54 | 29 | 0 | 5 | 58 | 17 | 70 | 3.77e-11 | 56.6 |
| Msa1329230 | AT1G47760.1 | 41.333 | 75 | 35 | 2 | 1 | 75 | 1 | 66 | 4.06e-11 | 56.2 |
Find 21 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACGACGTAGTTTCAACTTA+TGG | 0.194893 | 8_4:+47635361 | Msa1329230:CDS |
| CAAAGAAAATATATGTATAA+AGG | 0.264770 | 8_4:-47633086 | None:intergenic |
| GAAACAGATTTGCACCAAAT+TGG | 0.280301 | 8_4:-47633115 | None:intergenic |
| ACGACGTAGTTTCAACTTAT+GGG | 0.337921 | 8_4:+47635362 | Msa1329230:CDS |
| GTGCCTAGAACAGGAAAATA+AGG | 0.354778 | 8_4:-47633060 | None:intergenic |
| AAAGAAAATATATGTATAAA+GGG | 0.409393 | 8_4:-47633085 | None:intergenic |
| TGAATCTACAGCGTGAAACT+TGG | 0.422993 | 8_4:-47635338 | None:intergenic |
| TAAAGGGTTGTGCCTAGAAC+AGG | 0.433795 | 8_4:-47633069 | None:intergenic |
| GCAAGAAAAGCAATTTCAAA+AGG | 0.455026 | 8_4:-47633137 | None:intergenic |
| GAATCTACAGCGTGAAACTT+GGG | 0.472060 | 8_4:-47635337 | None:intergenic |
| AATTCATGAAGCGTCCCTCT+TGG | 0.509099 | 8_4:-47633782 | None:intergenic |
| ACAGGAAAATAAGGAAGGGA+AGG | 0.522973 | 8_4:-47633051 | None:intergenic |
| ACATTCTCAAAGAGAAGAAG+TGG | 0.544843 | 8_4:+47633692 | Msa1329230:CDS |
| CTAGAACAGGAAAATAAGGA+AGG | 0.556487 | 8_4:-47633056 | None:intergenic |
| ACACAACACTGATAATTCAA+AGG | 0.574514 | 8_4:-47633729 | None:intergenic |
| CAGGAAAATAAGGAAGGGAA+GGG | 0.585818 | 8_4:-47633050 | None:intergenic |
| AATCTACAGCGTGAAACTTG+GGG | 0.588882 | 8_4:-47635336 | None:intergenic |
| TTCATGAATTTGCTAGCTCT+AGG | 0.597488 | 8_4:+47633795 | Msa1329230:CDS |
| TAGAACAGGAAAATAAGGAA+GGG | 0.626087 | 8_4:-47633055 | None:intergenic |
| ATCAGTGTTGTGTGACGCTG+AGG | 0.635442 | 8_4:+47633739 | Msa1329230:CDS |
| GTATAGAGAACGCAACAAGT+AGG | 0.642404 | 8_4:+47633663 | Msa1329230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAATATATGTATAAA+GGG | - | chr8_4:47633088-47633107 | None:intergenic | 10.0% |
| !! | AATATTAATCATTTGAAAAA+TGG | - | chr8_4:47634606-47634625 | None:intergenic | 10.0% |
| !! | AAAGAAAATATATGTATAAA+GGG | - | chr8_4:47633088-47633107 | None:intergenic | 10.0% |
| !! | AATATTAATCATTTGAAAAA+TGG | - | chr8_4:47634606-47634625 | None:intergenic | 10.0% |
| !! | TAAAAAATGAATAAGAGTTA+AGG | - | chr8_4:47633030-47633049 | None:intergenic | 15.0% |
| !! | CAAAGAAAATATATGTATAA+AGG | - | chr8_4:47633089-47633108 | None:intergenic | 15.0% |
| !!! | TATTTGATGACTAAATTAAA+TGG | - | chr8_4:47633251-47633270 | None:intergenic | 15.0% |
| !!! | TTTTTGTTATGAATTGAAAT+AGG | + | chr8_4:47633510-47633529 | Msa1329230:intron | 15.0% |
| !! | TGGTATAATTTATTTATCAA+GGG | + | chr8_4:47633883-47633902 | Msa1329230:intron | 15.0% |
| !! | ATTAGATCTATTAAAAATCA+AGG | - | chr8_4:47634216-47634235 | None:intergenic | 15.0% |
| !!! | TCCTTTTAATATTATAAACA+AGG | + | chr8_4:47634301-47634320 | Msa1329230:intron | 15.0% |
| !!! | AATATTAATCATTTGACTTT+TGG | + | chr8_4:47634409-47634428 | Msa1329230:intron | 15.0% |
| !! | AAAAAAAAAAAAACCTAGTT+AGG | - | chr8_4:47634436-47634455 | None:intergenic | 15.0% |
| !!! | TATCTTTTGTTTTTGTTTAT+AGG | - | chr8_4:47634714-47634733 | None:intergenic | 15.0% |
| !!! | ATGTTGTTAAATTTTGATTT+TGG | - | chr8_4:47635066-47635085 | None:intergenic | 15.0% |
| !! | TTAAAATTATCTCTATTTGA+TGG | - | chr8_4:47635115-47635134 | None:intergenic | 15.0% |
| !! | TAAAAAATGAATAAGAGTTA+AGG | - | chr8_4:47633030-47633049 | None:intergenic | 15.0% |
| !! | CAAAGAAAATATATGTATAA+AGG | - | chr8_4:47633089-47633108 | None:intergenic | 15.0% |
| !!! | TATTTGATGACTAAATTAAA+TGG | - | chr8_4:47633251-47633270 | None:intergenic | 15.0% |
| !!! | TTTTTGTTATGAATTGAAAT+AGG | + | chr8_4:47633510-47633529 | Msa1329230:intron | 15.0% |
| !! | TGGTATAATTTATTTATCAA+GGG | + | chr8_4:47633883-47633902 | Msa1329230:intron | 15.0% |
| !! | ATTAGATCTATTAAAAATCA+AGG | - | chr8_4:47634216-47634235 | None:intergenic | 15.0% |
| !!! | TCCTTTTAATATTATAAACA+AGG | + | chr8_4:47634301-47634320 | Msa1329230:intron | 15.0% |
| !!! | AATATTAATCATTTGACTTT+TGG | + | chr8_4:47634409-47634428 | Msa1329230:intron | 15.0% |
| !! | AAAAAAAAAAAAACCTAGTT+AGG | - | chr8_4:47634436-47634455 | None:intergenic | 15.0% |
| !!! | TATCTTTTGTTTTTGTTTAT+AGG | - | chr8_4:47634714-47634733 | None:intergenic | 15.0% |
| !!! | ATGTTGTTAAATTTTGATTT+TGG | - | chr8_4:47635066-47635085 | None:intergenic | 15.0% |
| !! | TTAAAATTATCTCTATTTGA+TGG | - | chr8_4:47635115-47635134 | None:intergenic | 15.0% |
| !!! | CTTTTCTGATTAATTGATAT+AGG | - | chr8_4:47633175-47633194 | None:intergenic | 20.0% |
| !! | AAAAGCTCTTAAATCTTTAT+AGG | + | chr8_4:47633190-47633209 | Msa1329230:intron | 20.0% |
| !! | AAACAAGAACAACATAAATT+AGG | - | chr8_4:47633586-47633605 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAAGAAAAAAAA+TGG | + | chr8_4:47633616-47633635 | Msa1329230:intron | 20.0% |
| !! | CTGGTATAATTTATTTATCA+AGG | + | chr8_4:47633882-47633901 | Msa1329230:intron | 20.0% |
| !! | GAGATAACATATTTAATAGA+AGG | - | chr8_4:47634283-47634302 | None:intergenic | 20.0% |
| !!! | GCCTTGTTTATAATATTAAA+AGG | - | chr8_4:47634305-47634324 | None:intergenic | 20.0% |
| !! | ATTATAAACAAGGCTTAAAT+AGG | + | chr8_4:47634311-47634330 | Msa1329230:intron | 20.0% |
| !! | AGTCAAATGATTAATATTTG+CGG | - | chr8_4:47634407-47634426 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATAGGCTTAAAT+AGG | - | chr8_4:47634704-47634723 | None:intergenic | 20.0% |
| !!! | TTTAAACTCTAAAGTTAATG+TGG | + | chr8_4:47634794-47634813 | Msa1329230:intron | 20.0% |
| !! | GAAATAAATCTCACATAAAA+TGG | - | chr8_4:47634828-47634847 | None:intergenic | 20.0% |
| !!! | GCTTTATGTACTTTTTTTAA+TGG | - | chr8_4:47635019-47635038 | None:intergenic | 20.0% |
| !!! | TTAAATTTTGATTTTGGTCT+TGG | - | chr8_4:47635060-47635079 | None:intergenic | 20.0% |
| !!! | TAGGATACTATTTAATTTCA+TGG | - | chr8_4:47635140-47635159 | None:intergenic | 20.0% |
| !! | CTTAATGTAACTTAATGTTA+TGG | - | chr8_4:47635174-47635193 | None:intergenic | 20.0% |
| !!! | CTTTTCTGATTAATTGATAT+AGG | - | chr8_4:47633175-47633194 | None:intergenic | 20.0% |
| !! | AAAAGCTCTTAAATCTTTAT+AGG | + | chr8_4:47633190-47633209 | Msa1329230:intron | 20.0% |
| !! | AAACAAGAACAACATAAATT+AGG | - | chr8_4:47633586-47633605 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAAGAAAAAAAA+TGG | + | chr8_4:47633616-47633635 | Msa1329230:intron | 20.0% |
| !! | CTGGTATAATTTATTTATCA+AGG | + | chr8_4:47633882-47633901 | Msa1329230:intron | 20.0% |
| !! | GAGATAACATATTTAATAGA+AGG | - | chr8_4:47634283-47634302 | None:intergenic | 20.0% |
| !!! | GCCTTGTTTATAATATTAAA+AGG | - | chr8_4:47634305-47634324 | None:intergenic | 20.0% |
| !! | ATTATAAACAAGGCTTAAAT+AGG | + | chr8_4:47634311-47634330 | Msa1329230:intron | 20.0% |
| !! | AGTCAAATGATTAATATTTG+CGG | - | chr8_4:47634407-47634426 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATAGGCTTAAAT+AGG | - | chr8_4:47634704-47634723 | None:intergenic | 20.0% |
| !!! | TTTAAACTCTAAAGTTAATG+TGG | + | chr8_4:47634794-47634813 | Msa1329230:intron | 20.0% |
| !! | GAAATAAATCTCACATAAAA+TGG | - | chr8_4:47634828-47634847 | None:intergenic | 20.0% |
| !!! | GCTTTATGTACTTTTTTTAA+TGG | - | chr8_4:47635019-47635038 | None:intergenic | 20.0% |
| !!! | TTAAATTTTGATTTTGGTCT+TGG | - | chr8_4:47635060-47635079 | None:intergenic | 20.0% |
| !!! | TAGGATACTATTTAATTTCA+TGG | - | chr8_4:47635140-47635159 | None:intergenic | 20.0% |
| !! | CTTAATGTAACTTAATGTTA+TGG | - | chr8_4:47635174-47635193 | None:intergenic | 20.0% |
| !!! | TTTCTTTGATTTTGCCAATT+TGG | + | chr8_4:47633101-47633120 | Msa1329230:five_prime_UTR | 25.0% |
| ! | AAATAGCTTCCTAGAAAAAA+GGG | - | chr8_4:47633224-47633243 | None:intergenic | 25.0% |
| ! | AAAATAGCTTCCTAGAAAAA+AGG | - | chr8_4:47633225-47633244 | None:intergenic | 25.0% |
| ! | AGGAACAAAAATTCTTAGAA+GGG | - | chr8_4:47633338-47633357 | None:intergenic | 25.0% |
| ! | AAGGAACAAAAATTCTTAGA+AGG | - | chr8_4:47633339-47633358 | None:intergenic | 25.0% |
| !! | TCTAAGAATTTTTGTTCCTT+TGG | + | chr8_4:47633339-47633358 | Msa1329230:intron | 25.0% |
| !!! | TTTTGTTCCTTTGGTTTTAT+TGG | + | chr8_4:47633348-47633367 | Msa1329230:intron | 25.0% |
| !!! | TTTGTTCCTTTGGTTTTATT+GGG | + | chr8_4:47633349-47633368 | Msa1329230:intron | 25.0% |
| ! | TCTAGAAAGTTATGGAAAAA+TGG | - | chr8_4:47633416-47633435 | None:intergenic | 25.0% |
| !!! | CTTTAAGATCTAGAAAGTTA+TGG | - | chr8_4:47633424-47633443 | None:intergenic | 25.0% |
| ! | CATAACTTTCTAGATCTTAA+AGG | + | chr8_4:47633422-47633441 | Msa1329230:intron | 25.0% |
| ! | TTTAAACCTTGTAAGGAAAA+GGG | - | chr8_4:47633461-47633480 | None:intergenic | 25.0% |
| ! | ATTTAAACCTTGTAAGGAAA+AGG | - | chr8_4:47633462-47633481 | None:intergenic | 25.0% |
| ! | AACACAATTTAAACCTTGTA+AGG | - | chr8_4:47633468-47633487 | None:intergenic | 25.0% |
| !! | TAAATTGTGTTTTTCCTTCT+TGG | + | chr8_4:47633477-47633496 | Msa1329230:intron | 25.0% |
| ! | AAAAGAAAAAAAATGGTGAG+AGG | + | chr8_4:47633623-47633642 | Msa1329230:exon | 25.0% |
| ! | AGTGTAAAGATATGTTAGTA+AGG | - | chr8_4:47634088-47634107 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTTTTTTTTGCTG+AGG | + | chr8_4:47634440-47634459 | Msa1329230:intron | 25.0% |
| !!! | TTTTTTTTTTTTTGCTGAGG+TGG | + | chr8_4:47634443-47634462 | Msa1329230:intron | 25.0% |
| !!! | TTTTTTTTTTTTGCTGAGGT+GGG | + | chr8_4:47634444-47634463 | Msa1329230:intron | 25.0% |
| ! | GTTACTAATCAGATGTAATT+AGG | + | chr8_4:47634579-47634598 | Msa1329230:intron | 25.0% |
| ! | CAAATGATTAATATTTGCAG+TGG | + | chr8_4:47634611-47634630 | Msa1329230:intron | 25.0% |
| ! | TACGATTACAAAGATTACAA+CGG | + | chr8_4:47634732-47634751 | Msa1329230:intron | 25.0% |
| ! | AATATGTATGTCTTACATGT+TGG | - | chr8_4:47634850-47634869 | None:intergenic | 25.0% |
| ! | ATTACACTCAATAAGAAAGA+TGG | + | chr8_4:47634871-47634890 | Msa1329230:intron | 25.0% |
| ! | TTACACTCAATAAGAAAGAT+GGG | + | chr8_4:47634872-47634891 | Msa1329230:intron | 25.0% |
| !!! | TAATGGTTTTGTTGAGTTTA+TGG | - | chr8_4:47635002-47635021 | None:intergenic | 25.0% |
| ! | AGATCATACACAGTTAATTT+AGG | + | chr8_4:47635286-47635305 | Msa1329230:intron | 25.0% |
| ! | GATCATACACAGTTAATTTA+GGG | + | chr8_4:47635287-47635306 | Msa1329230:intron | 25.0% |
| ! | ATCATACACAGTTAATTTAG+GGG | + | chr8_4:47635288-47635307 | Msa1329230:intron | 25.0% |
| !!! | TTTCTTTGATTTTGCCAATT+TGG | + | chr8_4:47633101-47633120 | Msa1329230:five_prime_UTR | 25.0% |
| ! | AAATAGCTTCCTAGAAAAAA+GGG | - | chr8_4:47633224-47633243 | None:intergenic | 25.0% |
| ! | AAAATAGCTTCCTAGAAAAA+AGG | - | chr8_4:47633225-47633244 | None:intergenic | 25.0% |
| ! | AGGAACAAAAATTCTTAGAA+GGG | - | chr8_4:47633338-47633357 | None:intergenic | 25.0% |
| ! | AAGGAACAAAAATTCTTAGA+AGG | - | chr8_4:47633339-47633358 | None:intergenic | 25.0% |
| !! | TCTAAGAATTTTTGTTCCTT+TGG | + | chr8_4:47633339-47633358 | Msa1329230:intron | 25.0% |
| !!! | TTTTGTTCCTTTGGTTTTAT+TGG | + | chr8_4:47633348-47633367 | Msa1329230:intron | 25.0% |
| !!! | TTTGTTCCTTTGGTTTTATT+GGG | + | chr8_4:47633349-47633368 | Msa1329230:intron | 25.0% |
| ! | TCTAGAAAGTTATGGAAAAA+TGG | - | chr8_4:47633416-47633435 | None:intergenic | 25.0% |
| !!! | CTTTAAGATCTAGAAAGTTA+TGG | - | chr8_4:47633424-47633443 | None:intergenic | 25.0% |
| ! | CATAACTTTCTAGATCTTAA+AGG | + | chr8_4:47633422-47633441 | Msa1329230:intron | 25.0% |
| ! | TTTAAACCTTGTAAGGAAAA+GGG | - | chr8_4:47633461-47633480 | None:intergenic | 25.0% |
| ! | ATTTAAACCTTGTAAGGAAA+AGG | - | chr8_4:47633462-47633481 | None:intergenic | 25.0% |
| ! | AACACAATTTAAACCTTGTA+AGG | - | chr8_4:47633468-47633487 | None:intergenic | 25.0% |
| !! | TAAATTGTGTTTTTCCTTCT+TGG | + | chr8_4:47633477-47633496 | Msa1329230:intron | 25.0% |
| ! | AAAAGAAAAAAAATGGTGAG+AGG | + | chr8_4:47633623-47633642 | Msa1329230:exon | 25.0% |
| ! | AGTGTAAAGATATGTTAGTA+AGG | - | chr8_4:47634088-47634107 | None:intergenic | 25.0% |
| !!! | AGGTTTTTTTTTTTTTGCTG+AGG | + | chr8_4:47634440-47634459 | Msa1329230:intron | 25.0% |
| !!! | TTTTTTTTTTTTTGCTGAGG+TGG | + | chr8_4:47634443-47634462 | Msa1329230:intron | 25.0% |
| !!! | TTTTTTTTTTTTGCTGAGGT+GGG | + | chr8_4:47634444-47634463 | Msa1329230:intron | 25.0% |
| ! | GTTACTAATCAGATGTAATT+AGG | + | chr8_4:47634579-47634598 | Msa1329230:intron | 25.0% |
| ! | CAAATGATTAATATTTGCAG+TGG | + | chr8_4:47634611-47634630 | Msa1329230:intron | 25.0% |
| ! | TACGATTACAAAGATTACAA+CGG | + | chr8_4:47634732-47634751 | Msa1329230:intron | 25.0% |
| ! | AATATGTATGTCTTACATGT+TGG | - | chr8_4:47634850-47634869 | None:intergenic | 25.0% |
| ! | ATTACACTCAATAAGAAAGA+TGG | + | chr8_4:47634871-47634890 | Msa1329230:intron | 25.0% |
| ! | TTACACTCAATAAGAAAGAT+GGG | + | chr8_4:47634872-47634891 | Msa1329230:intron | 25.0% |
| !!! | TAATGGTTTTGTTGAGTTTA+TGG | - | chr8_4:47635002-47635021 | None:intergenic | 25.0% |
| ! | AGATCATACACAGTTAATTT+AGG | + | chr8_4:47635286-47635305 | Msa1329230:intron | 25.0% |
| ! | GATCATACACAGTTAATTTA+GGG | + | chr8_4:47635287-47635306 | Msa1329230:intron | 25.0% |
| ! | ATCATACACAGTTAATTTAG+GGG | + | chr8_4:47635288-47635307 | Msa1329230:intron | 25.0% |
| TAGAACAGGAAAATAAGGAA+GGG | - | chr8_4:47633058-47633077 | None:intergenic | 30.0% | |
| GCAAGAAAAGCAATTTCAAA+AGG | - | chr8_4:47633140-47633159 | None:intergenic | 30.0% | |
| !! | TTTGAAATTGCTTTTCTTGC+TGG | + | chr8_4:47633140-47633159 | Msa1329230:five_prime_UTR | 30.0% |
| GATGAAAGAAACAAGGAAAT+GGG | - | chr8_4:47633299-47633318 | None:intergenic | 30.0% | |
| TATGAAGGATGAAAGAAACA+AGG | - | chr8_4:47633306-47633325 | None:intergenic | 30.0% | |
| ACACAACACTGATAATTCAA+AGG | - | chr8_4:47633732-47633751 | None:intergenic | 30.0% | |
| ! | TTATTGTTTTCTCACCAAGA+GGG | + | chr8_4:47633768-47633787 | Msa1329230:CDS | 30.0% |
| TTGTGTGATTATATTGCATC+TGG | + | chr8_4:47633863-47633882 | Msa1329230:intron | 30.0% | |
| AGAAGTGAGAGAAAGAAAAT+AGG | + | chr8_4:47633988-47634007 | Msa1329230:intron | 30.0% | |
| CAAATGATTAATATTTGCGG+TGG | - | chr8_4:47634404-47634423 | None:intergenic | 30.0% | |
| TCAAATGACCTATATTTGCA+GGG | - | chr8_4:47634544-47634563 | None:intergenic | 30.0% | |
| TTCAAATGACCTATATTTGC+AGG | - | chr8_4:47634545-47634564 | None:intergenic | 30.0% | |
| ACATCTGATTAGTAACTTCA+GGG | - | chr8_4:47634575-47634594 | None:intergenic | 30.0% | |
| TACATCTGATTAGTAACTTC+AGG | - | chr8_4:47634576-47634595 | None:intergenic | 30.0% | |
| TTCAAATAGCCTATATTTGC+AGG | + | chr8_4:47634669-47634688 | Msa1329230:intron | 30.0% | |
| TCAAATAGCCTATATTTGCA+GGG | + | chr8_4:47634670-47634689 | Msa1329230:intron | 30.0% | |
| TACACTCAATAAGAAAGATG+GGG | + | chr8_4:47634873-47634892 | Msa1329230:intron | 30.0% | |
| TGTAACTTAATGTTATGGTG+TGG | - | chr8_4:47635169-47635188 | None:intergenic | 30.0% | |
| ACATTAAGTTAAACTAGCAC+AGG | + | chr8_4:47635186-47635205 | Msa1329230:intron | 30.0% | |
| TCATACACAGTTAATTTAGG+GGG | + | chr8_4:47635289-47635308 | Msa1329230:intron | 30.0% | |
| TAGAACAGGAAAATAAGGAA+GGG | - | chr8_4:47633058-47633077 | None:intergenic | 30.0% | |
| GCAAGAAAAGCAATTTCAAA+AGG | - | chr8_4:47633140-47633159 | None:intergenic | 30.0% | |
| !! | TTTGAAATTGCTTTTCTTGC+TGG | + | chr8_4:47633140-47633159 | Msa1329230:five_prime_UTR | 30.0% |
| GATGAAAGAAACAAGGAAAT+GGG | - | chr8_4:47633299-47633318 | None:intergenic | 30.0% | |
| TATGAAGGATGAAAGAAACA+AGG | - | chr8_4:47633306-47633325 | None:intergenic | 30.0% | |
| ACACAACACTGATAATTCAA+AGG | - | chr8_4:47633732-47633751 | None:intergenic | 30.0% | |
| ! | TTATTGTTTTCTCACCAAGA+GGG | + | chr8_4:47633768-47633787 | Msa1329230:CDS | 30.0% |
| TTGTGTGATTATATTGCATC+TGG | + | chr8_4:47633863-47633882 | Msa1329230:intron | 30.0% | |
| AGAAGTGAGAGAAAGAAAAT+AGG | + | chr8_4:47633988-47634007 | Msa1329230:intron | 30.0% | |
| CAAATGATTAATATTTGCGG+TGG | - | chr8_4:47634404-47634423 | None:intergenic | 30.0% | |
| TCAAATGACCTATATTTGCA+GGG | - | chr8_4:47634544-47634563 | None:intergenic | 30.0% | |
| TTCAAATGACCTATATTTGC+AGG | - | chr8_4:47634545-47634564 | None:intergenic | 30.0% | |
| ACATCTGATTAGTAACTTCA+GGG | - | chr8_4:47634575-47634594 | None:intergenic | 30.0% | |
| TACATCTGATTAGTAACTTC+AGG | - | chr8_4:47634576-47634595 | None:intergenic | 30.0% | |
| TTCAAATAGCCTATATTTGC+AGG | + | chr8_4:47634669-47634688 | Msa1329230:intron | 30.0% | |
| TCAAATAGCCTATATTTGCA+GGG | + | chr8_4:47634670-47634689 | Msa1329230:intron | 30.0% | |
| TACACTCAATAAGAAAGATG+GGG | + | chr8_4:47634873-47634892 | Msa1329230:intron | 30.0% | |
| TGTAACTTAATGTTATGGTG+TGG | - | chr8_4:47635169-47635188 | None:intergenic | 30.0% | |
| ACATTAAGTTAAACTAGCAC+AGG | + | chr8_4:47635186-47635205 | Msa1329230:intron | 30.0% | |
| TCATACACAGTTAATTTAGG+GGG | + | chr8_4:47635289-47635308 | Msa1329230:intron | 30.0% | |
| CTAGAACAGGAAAATAAGGA+AGG | - | chr8_4:47633059-47633078 | None:intergenic | 35.0% | |
| !!! | CTTCCTTATTTTCCTGTTCT+AGG | + | chr8_4:47633057-47633076 | Msa1329230:five_prime_UTR | 35.0% |
| GAAACAGATTTGCACCAAAT+TGG | - | chr8_4:47633118-47633137 | None:intergenic | 35.0% | |
| !!! | GTGTTTAGACCCTTTTTTCT+AGG | + | chr8_4:47633212-47633231 | Msa1329230:intron | 35.0% |
| GGATGAAAGAAACAAGGAAA+TGG | - | chr8_4:47633300-47633319 | None:intergenic | 35.0% | |
| !! | GAAGGGTGTTTGAAATATGA+AGG | - | chr8_4:47633321-47633340 | None:intergenic | 35.0% |
| TTACCACCCAATAAAACCAA+AGG | - | chr8_4:47633358-47633377 | None:intergenic | 35.0% | |
| ! | TTTCATCCCTTTTCCTTACA+AGG | + | chr8_4:47633452-47633471 | Msa1329230:intron | 35.0% |
| AAAAAAAGTCCTCACCAAGA+AGG | - | chr8_4:47633494-47633513 | None:intergenic | 35.0% | |
| ACATTCTCAAAGAGAAGAAG+TGG | + | chr8_4:47633692-47633711 | Msa1329230:CDS | 35.0% | |
| ! | CTTATTGTTTTCTCACCAAG+AGG | + | chr8_4:47633767-47633786 | Msa1329230:CDS | 35.0% |
| !! | TTCATGAATTTGCTAGCTCT+AGG | + | chr8_4:47633795-47633814 | Msa1329230:CDS | 35.0% |
| TCAAATGGCCTATATTTGCA+GGG | - | chr8_4:47634345-47634364 | None:intergenic | 35.0% | |
| TTCAAATGGCCTATATTTGC+AGG | - | chr8_4:47634346-47634365 | None:intergenic | 35.0% | |
| TTCAGGGACGAAAATTCAAA+TGG | - | chr8_4:47634655-47634674 | None:intergenic | 35.0% | |
| !! | TTTGACTTTTGGTCCTAACT+AGG | + | chr8_4:47634420-47634439 | Msa1329230:intron | 35.0% |
| TAATATTTGCAGTGGCAGAT+TGG | + | chr8_4:47634619-47634638 | Msa1329230:intron | 35.0% | |
| ! | TTGGAAGGATTAGTAACTTC+AGG | + | chr8_4:47634638-47634657 | Msa1329230:intron | 35.0% |
| ! | TGGAAGGATTAGTAACTTCA+GGG | + | chr8_4:47634639-47634658 | Msa1329230:intron | 35.0% |
| TATTTCGTCCCTGCAAATAT+AGG | - | chr8_4:47634681-47634700 | None:intergenic | 35.0% | |
| ACTAACGTAAACACTAGTCA+CGG | - | chr8_4:47634943-47634962 | None:intergenic | 35.0% | |
| ! | TAGTGTTTACGTTAGTTTCC+AGG | + | chr8_4:47634947-47634966 | Msa1329230:intron | 35.0% |
| ! | AGTGTTTACGTTAGTTTCCA+GGG | + | chr8_4:47634948-47634967 | Msa1329230:intron | 35.0% |
| AACTTAATGTTATGGTGTGG+AGG | - | chr8_4:47635166-47635185 | None:intergenic | 35.0% | |
| AACGACGTAGTTTCAACTTA+TGG | + | chr8_4:47635361-47635380 | Msa1329230:CDS | 35.0% | |
| ACGACGTAGTTTCAACTTAT+GGG | + | chr8_4:47635362-47635381 | Msa1329230:CDS | 35.0% | |
| CTAGAACAGGAAAATAAGGA+AGG | - | chr8_4:47633059-47633078 | None:intergenic | 35.0% | |
| !!! | CTTCCTTATTTTCCTGTTCT+AGG | + | chr8_4:47633057-47633076 | Msa1329230:five_prime_UTR | 35.0% |
| GAAACAGATTTGCACCAAAT+TGG | - | chr8_4:47633118-47633137 | None:intergenic | 35.0% | |
| !!! | GTGTTTAGACCCTTTTTTCT+AGG | + | chr8_4:47633212-47633231 | Msa1329230:intron | 35.0% |
| GGATGAAAGAAACAAGGAAA+TGG | - | chr8_4:47633300-47633319 | None:intergenic | 35.0% | |
| !! | GAAGGGTGTTTGAAATATGA+AGG | - | chr8_4:47633321-47633340 | None:intergenic | 35.0% |
| TTACCACCCAATAAAACCAA+AGG | - | chr8_4:47633358-47633377 | None:intergenic | 35.0% | |
| ! | TTTCATCCCTTTTCCTTACA+AGG | + | chr8_4:47633452-47633471 | Msa1329230:intron | 35.0% |
| AAAAAAAGTCCTCACCAAGA+AGG | - | chr8_4:47633494-47633513 | None:intergenic | 35.0% | |
| ACATTCTCAAAGAGAAGAAG+TGG | + | chr8_4:47633692-47633711 | Msa1329230:CDS | 35.0% | |
| ! | CTTATTGTTTTCTCACCAAG+AGG | + | chr8_4:47633767-47633786 | Msa1329230:CDS | 35.0% |
| !! | TTCATGAATTTGCTAGCTCT+AGG | + | chr8_4:47633795-47633814 | Msa1329230:CDS | 35.0% |
| TCAAATGGCCTATATTTGCA+GGG | - | chr8_4:47634345-47634364 | None:intergenic | 35.0% | |
| TTCAAATGGCCTATATTTGC+AGG | - | chr8_4:47634346-47634365 | None:intergenic | 35.0% | |
| TTCAGGGACGAAAATTCAAA+TGG | - | chr8_4:47634655-47634674 | None:intergenic | 35.0% | |
| !! | TTTGACTTTTGGTCCTAACT+AGG | + | chr8_4:47634420-47634439 | Msa1329230:intron | 35.0% |
| TAATATTTGCAGTGGCAGAT+TGG | + | chr8_4:47634619-47634638 | Msa1329230:intron | 35.0% | |
| ! | TTGGAAGGATTAGTAACTTC+AGG | + | chr8_4:47634638-47634657 | Msa1329230:intron | 35.0% |
| ! | TGGAAGGATTAGTAACTTCA+GGG | + | chr8_4:47634639-47634658 | Msa1329230:intron | 35.0% |
| TATTTCGTCCCTGCAAATAT+AGG | - | chr8_4:47634681-47634700 | None:intergenic | 35.0% | |
| ACTAACGTAAACACTAGTCA+CGG | - | chr8_4:47634943-47634962 | None:intergenic | 35.0% | |
| ! | TAGTGTTTACGTTAGTTTCC+AGG | + | chr8_4:47634947-47634966 | Msa1329230:intron | 35.0% |
| ! | AGTGTTTACGTTAGTTTCCA+GGG | + | chr8_4:47634948-47634967 | Msa1329230:intron | 35.0% |
| AACTTAATGTTATGGTGTGG+AGG | - | chr8_4:47635166-47635185 | None:intergenic | 35.0% | |
| AACGACGTAGTTTCAACTTA+TGG | + | chr8_4:47635361-47635380 | Msa1329230:CDS | 35.0% | |
| ACGACGTAGTTTCAACTTAT+GGG | + | chr8_4:47635362-47635381 | Msa1329230:CDS | 35.0% | |
| CAGGAAAATAAGGAAGGGAA+GGG | - | chr8_4:47633053-47633072 | None:intergenic | 40.0% | |
| ACAGGAAAATAAGGAAGGGA+AGG | - | chr8_4:47633054-47633073 | None:intergenic | 40.0% | |
| GTGCCTAGAACAGGAAAATA+AGG | - | chr8_4:47633063-47633082 | None:intergenic | 40.0% | |
| !!! | GTTCCTTTGGTTTTATTGGG+TGG | + | chr8_4:47633352-47633371 | Msa1329230:intron | 40.0% |
| ! | TGTGTTTTTCCTTCTTGGTG+AGG | + | chr8_4:47633482-47633501 | Msa1329230:intron | 40.0% |
| GTATAGAGAACGCAACAAGT+AGG | + | chr8_4:47633663-47633682 | Msa1329230:CDS | 40.0% | |
| ! | TGGGAGGATTAGTAACTTCA+GGG | - | chr8_4:47634376-47634395 | None:intergenic | 40.0% |
| ! | TTGGGAGGATTAGTAACTTC+AGG | - | chr8_4:47634377-47634396 | None:intergenic | 40.0% |
| AATATTTGCGGTGGCAGATT+GGG | - | chr8_4:47634395-47634414 | None:intergenic | 40.0% | |
| TAATATTTGCGGTGGCAGAT+TGG | - | chr8_4:47634396-47634415 | None:intergenic | 40.0% | |
| TCTTTCGTCCCTGCAAATAT+AGG | + | chr8_4:47634533-47634552 | Msa1329230:intron | 40.0% | |
| ! | GAAATCTGAAGTTAGAACCC+TGG | - | chr8_4:47634968-47634987 | None:intergenic | 40.0% |
| CAGCACATCACATGTAGTTA+CGG | + | chr8_4:47635215-47635234 | Msa1329230:intron | 40.0% | |
| TACACAGTTAATTTAGGGGG+TGG | + | chr8_4:47635292-47635311 | Msa1329230:intron | 40.0% | |
| ACACAGTTAATTTAGGGGGT+GGG | + | chr8_4:47635293-47635312 | Msa1329230:intron | 40.0% | |
| AATCTACAGCGTGAAACTTG+GGG | - | chr8_4:47635339-47635358 | None:intergenic | 40.0% | |
| GAATCTACAGCGTGAAACTT+GGG | - | chr8_4:47635340-47635359 | None:intergenic | 40.0% | |
| TGAATCTACAGCGTGAAACT+TGG | - | chr8_4:47635341-47635360 | None:intergenic | 40.0% | |
| CAGGAAAATAAGGAAGGGAA+GGG | - | chr8_4:47633053-47633072 | None:intergenic | 40.0% | |
| ACAGGAAAATAAGGAAGGGA+AGG | - | chr8_4:47633054-47633073 | None:intergenic | 40.0% | |
| GTGCCTAGAACAGGAAAATA+AGG | - | chr8_4:47633063-47633082 | None:intergenic | 40.0% | |
| !!! | GTTCCTTTGGTTTTATTGGG+TGG | + | chr8_4:47633352-47633371 | Msa1329230:intron | 40.0% |
| ! | TGTGTTTTTCCTTCTTGGTG+AGG | + | chr8_4:47633482-47633501 | Msa1329230:intron | 40.0% |
| GTATAGAGAACGCAACAAGT+AGG | + | chr8_4:47633663-47633682 | Msa1329230:CDS | 40.0% | |
| ! | TGGGAGGATTAGTAACTTCA+GGG | - | chr8_4:47634376-47634395 | None:intergenic | 40.0% |
| ! | TTGGGAGGATTAGTAACTTC+AGG | - | chr8_4:47634377-47634396 | None:intergenic | 40.0% |
| AATATTTGCGGTGGCAGATT+GGG | - | chr8_4:47634395-47634414 | None:intergenic | 40.0% | |
| TAATATTTGCGGTGGCAGAT+TGG | - | chr8_4:47634396-47634415 | None:intergenic | 40.0% | |
| TCTTTCGTCCCTGCAAATAT+AGG | + | chr8_4:47634533-47634552 | Msa1329230:intron | 40.0% | |
| ! | GAAATCTGAAGTTAGAACCC+TGG | - | chr8_4:47634968-47634987 | None:intergenic | 40.0% |
| CAGCACATCACATGTAGTTA+CGG | + | chr8_4:47635215-47635234 | Msa1329230:intron | 40.0% | |
| TACACAGTTAATTTAGGGGG+TGG | + | chr8_4:47635292-47635311 | Msa1329230:intron | 40.0% | |
| ACACAGTTAATTTAGGGGGT+GGG | + | chr8_4:47635293-47635312 | Msa1329230:intron | 40.0% | |
| AATCTACAGCGTGAAACTTG+GGG | - | chr8_4:47635339-47635358 | None:intergenic | 40.0% | |
| GAATCTACAGCGTGAAACTT+GGG | - | chr8_4:47635340-47635359 | None:intergenic | 40.0% | |
| TGAATCTACAGCGTGAAACT+TGG | - | chr8_4:47635341-47635360 | None:intergenic | 40.0% | |
| TAAAGGGTTGTGCCTAGAAC+AGG | - | chr8_4:47633072-47633091 | None:intergenic | 45.0% | |
| ! | AATTCATGAAGCGTCCCTCT+TGG | - | chr8_4:47633785-47633804 | None:intergenic | 45.0% |
| TCTGTCGTCCCTGCAAATAT+AGG | + | chr8_4:47634334-47634353 | Msa1329230:intron | 45.0% | |
| CCAATCATCACTTGCCACAT+GGG | - | chr8_4:47634490-47634509 | None:intergenic | 45.0% | |
| CCATGTGGCAAGTGATGATT+GGG | + | chr8_4:47634488-47634507 | Msa1329230:intron | 45.0% | |
| ATTTGCAGTGGCAGATTGGA+AGG | + | chr8_4:47634623-47634642 | Msa1329230:intron | 45.0% | |
| GTAAACACTAGTCACGGAAG+AGG | - | chr8_4:47634937-47634956 | None:intergenic | 45.0% | |
| !! | TGTTATGGTGTGGAGGTACT+AGG | - | chr8_4:47635159-47635178 | None:intergenic | 45.0% |
| TAAAGGGTTGTGCCTAGAAC+AGG | - | chr8_4:47633072-47633091 | None:intergenic | 45.0% | |
| ! | AATTCATGAAGCGTCCCTCT+TGG | - | chr8_4:47633785-47633804 | None:intergenic | 45.0% |
| TCTGTCGTCCCTGCAAATAT+AGG | + | chr8_4:47634334-47634353 | Msa1329230:intron | 45.0% | |
| CCAATCATCACTTGCCACAT+GGG | - | chr8_4:47634490-47634509 | None:intergenic | 45.0% | |
| CCATGTGGCAAGTGATGATT+GGG | + | chr8_4:47634488-47634507 | Msa1329230:intron | 45.0% | |
| ATTTGCAGTGGCAGATTGGA+AGG | + | chr8_4:47634623-47634642 | Msa1329230:intron | 45.0% | |
| GTAAACACTAGTCACGGAAG+AGG | - | chr8_4:47634937-47634956 | None:intergenic | 45.0% | |
| !! | TGTTATGGTGTGGAGGTACT+AGG | - | chr8_4:47635159-47635178 | None:intergenic | 45.0% |
| ATCAGTGTTGTGTGACGCTG+AGG | + | chr8_4:47633739-47633758 | Msa1329230:CDS | 50.0% | |
| CCCATGTGGCAAGTGATGAT+TGG | + | chr8_4:47634487-47634506 | Msa1329230:intron | 50.0% | |
| CCCAATCATCACTTGCCACA+TGG | - | chr8_4:47634491-47634510 | None:intergenic | 50.0% | |
| !! | GCGAGGTGGTTGGCTTAAAT+AGG | + | chr8_4:47634510-47634529 | Msa1329230:intron | 50.0% |
| ATCAGTGTTGTGTGACGCTG+AGG | + | chr8_4:47633739-47633758 | Msa1329230:CDS | 50.0% | |
| CCCATGTGGCAAGTGATGAT+TGG | + | chr8_4:47634487-47634506 | Msa1329230:intron | 50.0% | |
| CCCAATCATCACTTGCCACA+TGG | - | chr8_4:47634491-47634510 | None:intergenic | 50.0% | |
| !! | GCGAGGTGGTTGGCTTAAAT+AGG | + | chr8_4:47634510-47634529 | Msa1329230:intron | 50.0% |
| ATTTGCGGTGGCAGATTGGG+AGG | - | chr8_4:47634392-47634411 | None:intergenic | 55.0% | |
| TGGCAAGTGATGATTGGGCG+AGG | + | chr8_4:47634493-47634512 | Msa1329230:intron | 55.0% | |
| CAAGTGATGATTGGGCGAGG+TGG | + | chr8_4:47634496-47634515 | Msa1329230:intron | 55.0% | |
| TGATGATTGGGCGAGGTGGT+TGG | + | chr8_4:47634500-47634519 | Msa1329230:intron | 55.0% | |
| ATTTGCGGTGGCAGATTGGG+AGG | - | chr8_4:47634392-47634411 | None:intergenic | 55.0% | |
| TGGCAAGTGATGATTGGGCG+AGG | + | chr8_4:47634493-47634512 | Msa1329230:intron | 55.0% | |
| CAAGTGATGATTGGGCGAGG+TGG | + | chr8_4:47634496-47634515 | Msa1329230:intron | 55.0% | |
| TGATGATTGGGCGAGGTGGT+TGG | + | chr8_4:47634500-47634519 | Msa1329230:intron | 55.0% | |
| ! | GTGGGCTGTCATTAGCGACG+TGG | + | chr8_4:47634462-47634481 | Msa1329230:intron | 60.0% |
| TTAGCGACGTGGTGCCCATG+TGG | + | chr8_4:47634473-47634492 | Msa1329230:intron | 60.0% | |
| !! | GGGGTGGGATTTGCTGCTGT+AGG | + | chr8_4:47635308-47635327 | Msa1329230:intron | 60.0% |
| ! | GTGGGCTGTCATTAGCGACG+TGG | + | chr8_4:47634462-47634481 | Msa1329230:intron | 60.0% |
| TTAGCGACGTGGTGCCCATG+TGG | + | chr8_4:47634473-47634492 | Msa1329230:intron | 60.0% | |
| !! | GGGGTGGGATTTGCTGCTGT+AGG | + | chr8_4:47635308-47635327 | Msa1329230:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 47633004 | 47635390 | 47633004 | ID=Msa1329230;Name=Msa1329230 |
| chr8_4 | mRNA | 47633004 | 47635390 | 47633004 | ID=Msa1329230-mRNA-1;Parent=Msa1329230;Name=Msa1329230-mRNA-1;_AED=0.38;_eAED=0.38;_QI=175|0.5|0.66|0.66|0.5|0.66|3|0|80 |
| chr8_4 | exon | 47633004 | 47633161 | 47633004 | ID=Msa1329230-mRNA-1:exon:13653;Parent=Msa1329230-mRNA-1 |
| chr8_4 | exon | 47633618 | 47633816 | 47633618 | ID=Msa1329230-mRNA-1:exon:13654;Parent=Msa1329230-mRNA-1 |
| chr8_4 | exon | 47635330 | 47635390 | 47635330 | ID=Msa1329230-mRNA-1:exon:13655;Parent=Msa1329230-mRNA-1 |
| chr8_4 | five_prime_UTR | 47633004 | 47633161 | 47633004 | ID=Msa1329230-mRNA-1:five_prime_utr;Parent=Msa1329230-mRNA-1 |
| chr8_4 | five_prime_UTR | 47633618 | 47633634 | 47633618 | ID=Msa1329230-mRNA-1:five_prime_utr;Parent=Msa1329230-mRNA-1 |
| chr8_4 | CDS | 47633635 | 47633816 | 47633635 | ID=Msa1329230-mRNA-1:cds;Parent=Msa1329230-mRNA-1 |
| chr8_4 | CDS | 47635330 | 47635390 | 47635330 | ID=Msa1329230-mRNA-1:cds;Parent=Msa1329230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
