AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185320 MtrunA17_Chr8g0351031 91.518 224 12 1 1 217 1 224 4.06e-145 403
Msa1185320 MtrunA17_Chr8g0351041 91.925 161 13 0 1 161 1 161 1.04e-105 301
Msa1185320 MtrunA17_Chr7g0246431 66.981 212 59 4 1 205 1 208 3.59e-94 274
Msa1185320 MtrunA17_Chr4g0057151 58.333 216 70 4 1 209 1 203 1.34e-76 229
Msa1185320 MtrunA17_Chr3g0097101 45.455 209 105 3 1 203 16 221 3.93e-53 171
Msa1185320 MtrunA17_Chr2g0284911 49.714 175 87 1 3 177 18 191 3.68e-52 169
Msa1185320 MtrunA17_Chr8g0351051 42.922 219 108 3 1 203 1 218 1.86e-49 161
Msa1185320 MtrunA17_Chr3g0077501 47.953 171 88 1 1 171 1 170 6.52e-49 159
Msa1185320 MtrunA17_Chr8g0380021 46.067 178 95 1 3 180 19 195 5.47e-48 157
Msa1185320 MtrunA17_Chr8g0366231 50.296 169 82 2 1 168 1 168 8.39e-47 154
Msa1185320 MtrunA17_Chr5g0420091 47.727 176 82 4 1 171 1 171 2.89e-45 149
Msa1185320 MtrunA17_Chr7g0220111 43.655 197 98 4 1 191 1 190 1.59e-44 149
Msa1185320 MtrunA17_Chr4g0061691 47.059 170 88 2 1 169 1 169 2.66e-44 147
Msa1185320 MtrunA17_Chr2g0279821 46.023 176 83 3 1 171 1 169 3.20e-44 147
Msa1185320 MtrunA17_Chr5g0420081 43.192 213 104 5 1 206 1 203 6.36e-44 147
Msa1185320 MtrunA17_Chr4g0061671 45.665 173 88 3 1 171 1 169 8.14e-44 145
Msa1185320 MtrunA17_Chr6g0455511 42.929 198 100 5 1 191 1 192 2.15e-43 146
Msa1185320 MtrunA17_Chr4g0018421 39.901 203 118 2 1 202 1 200 7.98e-43 143
Msa1185320 MtrunA17_Chr3g0122251 45.402 174 92 2 1 171 1 174 4.83e-42 142
Msa1185320 MtrunA17_Chr7g0220121 44.444 180 89 4 1 174 1 175 3.09e-41 140
Msa1185320 MtrunA17_Chr4g0049541 44.253 174 89 2 1 171 1 169 1.61e-39 135
Msa1185320 MtrunA17_Chr1g0204111 36.036 222 127 2 1 212 17 233 1.69e-39 136
Msa1185320 MtrunA17_Chr5g0411691 42.105 171 96 1 1 171 1 168 7.72e-39 134
Msa1185320 MtrunA17_Chr4g0049901 40.758 211 119 4 1 206 27 236 1.67e-36 128
Msa1185320 MtrunA17_Chr6g0474371 43.103 174 94 4 1 171 1 172 7.03e-36 125
Msa1185320 MtrunA17_Chr4g0020221 47.977 173 81 3 1 168 1 169 1.31e-35 126
Msa1185320 MtrunA17_Chr1g0164791 38.798 183 94 3 1 172 1 176 1.51e-34 122
Msa1185320 MtrunA17_Chr5g0412461 37.118 229 116 6 1 206 1 224 1.51e-33 120
Msa1185320 MtrunA17_Chr5g0412271 37.391 230 115 7 1 206 1 225 5.78e-33 118
Msa1185320 MtrunA17_Chr3g0142191 41.875 160 83 3 1 157 1 153 7.91e-33 118
Msa1185320 MtrunA17_Chr3g0125241 39.735 151 81 4 1 148 26 169 7.65e-30 110
Msa1185320 MtrunA17_Chr5g0427401 37.288 177 100 3 1 173 1 170 2.83e-28 106
Msa1185320 MtrunA17_Chr7g0246381 75.410 61 15 0 1 61 1 61 1.53e-27 99.8
Msa1185320 MtrunA17_Chr5g0404951 37.143 175 96 5 1 168 1 168 1.03e-26 102
Msa1185320 MtrunA17_Chr8g0377561 75.862 58 14 0 1 58 1 58 1.06e-26 98.6
Msa1185320 MtrunA17_Chr1g0159661 35.119 168 95 5 1 165 1 157 1.18e-26 100
Msa1185320 MtrunA17_Chr2g0308251 65.217 69 24 0 1 69 1 69 4.03e-25 94.0
Msa1185320 MtrunA17_Chr5g0427921 68.333 60 19 0 1 60 1 60 5.23e-25 93.2
Msa1185320 MtrunA17_Chr1g0173161 71.667 60 17 0 1 60 1 60 9.46e-25 93.2
Msa1185320 MtrunA17_Chr3g0134451 65.278 72 24 1 1 71 1 72 1.29e-23 96.3
Msa1185320 MtrunA17_Chr5g0425191 66.102 59 20 0 1 59 1 59 3.70e-21 84.3
Msa1185320 MtrunA17_Chr4g0044071 62.712 59 22 0 1 59 1 59 6.73e-21 84.0
Msa1185320 MtrunA17_Chr8g0379021 35.000 160 87 4 3 157 13 160 1.01e-19 82.8
Msa1185320 MtrunA17_Chr4g0018951 39.167 120 67 2 14 128 24 142 1.44e-18 79.3
Msa1185320 MtrunA17_Chr1g0175601 40.385 104 60 1 1 102 1 104 1.55e-18 79.7
Msa1185320 MtrunA17_Chr1g0180591 40.816 98 53 1 1 98 1 93 2.38e-18 79.3
Msa1185320 MtrunA17_Chr2g0292791 53.731 67 31 0 3 69 10 76 2.50e-18 80.5
Msa1185320 MtrunA17_Chr1g0208581 50.746 67 33 0 3 69 10 76 3.20e-18 80.1
Msa1185320 MtrunA17_Chr3g0089141 50.746 67 33 0 3 69 10 76 5.31e-18 79.3
Msa1185320 MtrunA17_Chr1g0208561 50.746 67 33 0 3 69 10 76 5.65e-18 79.3
Msa1185320 MtrunA17_Chr1g0166611 72.917 48 13 0 13 60 17 64 8.58e-18 76.6
Msa1185320 MtrunA17_Chr2g0333981 39.286 112 65 1 1 112 11 119 2.08e-17 76.6
Msa1185320 MtrunA17_Chr8g0376821 44.828 87 43 1 1 87 1 82 2.27e-17 76.6
Msa1185320 MtrunA17_Chr1g0175611 41.667 96 54 1 1 94 1 96 3.02e-17 75.9
Msa1185320 MtrunA17_Chr3g0099411 50.746 67 33 0 3 69 10 76 4.10e-17 76.6
Msa1185320 MtrunA17_Chr1g0188671 30.244 205 110 8 3 204 48 222 4.85e-17 77.4
Msa1185320 MtrunA17_Chr8g0355091 52.239 67 32 0 3 69 10 76 5.79e-17 76.6
Msa1185320 MtrunA17_Chr1g0206721 50.746 67 33 0 3 69 10 76 6.55e-17 76.6
Msa1185320 MtrunA17_Chr1g0206701 50.746 67 33 0 3 69 10 76 9.47e-17 76.3
Msa1185320 MtrunA17_Chr1g0187361 50.746 67 33 0 3 69 10 76 9.76e-17 76.3
Msa1185320 MtrunA17_Chr5g0422421 30.457 197 108 5 3 188 10 188 1.34e-16 75.9
Msa1185320 MtrunA17_Chr3g0099421 52.239 67 32 0 3 69 35 101 1.50e-16 75.9
Msa1185320 MtrunA17_Chr1g0169761 49.275 69 35 0 1 69 1 69 1.73e-16 74.3
Msa1185320 MtrunA17_Chr5g0419601 50.746 67 33 0 3 69 10 76 2.04e-16 75.1
Msa1185320 MtrunA17_Chr2g0325971 49.254 67 34 0 3 69 10 76 2.15e-16 75.1
Msa1185320 MtrunA17_Chr8g0357771 34.615 104 66 1 1 102 1 104 2.99e-16 73.6
Msa1185320 MtrunA17_Chr1g0149391 49.254 67 34 0 3 69 10 76 3.33e-16 74.7
Msa1185320 MtrunA17_Chr1g0206991 47.761 67 35 0 3 69 10 76 3.60e-16 73.6
Msa1185320 MtrunA17_Chr2g0317481 49.254 67 34 0 3 69 10 76 4.25e-16 74.3
Msa1185320 MtrunA17_Chr2g0317451 49.254 67 34 0 3 69 10 76 4.38e-16 74.3
Msa1185320 MtrunA17_Chr4g0074101 42.529 87 45 1 1 87 1 82 5.62e-16 73.2
Msa1185320 MtrunA17_Chr4g0052081 44.928 69 38 0 1 69 1 69 3.71e-15 70.5
Msa1185320 MtrunA17_Chr4g0052061 29.452 146 92 3 1 141 1 140 3.93e-15 70.1
Msa1185320 MtrunA17_Chr5g0422941 47.761 67 35 0 3 69 10 76 6.04e-15 71.2
Msa1185320 MtrunA17_Chr2g0300421 46.269 67 36 0 3 69 10 76 8.69e-15 69.7
Msa1185320 MtrunA17_Chr3g0089151 45.714 70 36 1 2 69 7 76 1.20e-14 68.2
Msa1185320 MtrunA17_Chr8g0356071 36.082 97 60 2 1 95 1 97 1.56e-14 68.6
Msa1185320 MtrunA17_Chr5g0417661 52.830 53 25 0 1 53 56 108 1.63e-14 67.8
Msa1185320 MtrunA17_Chr1g0187351 47.619 63 33 0 11 73 1 63 3.10e-14 65.5
Msa1185320 MtrunA17_Chr2g0300441 46.154 65 35 0 5 69 12 76 7.22e-14 68.2
Msa1185320 MtrunA17_Chr3g0119901 29.808 208 113 10 3 205 10 189 8.91e-14 67.4
Msa1185320 MtrunA17_Chr3g0111841 50.000 60 29 1 7 66 1 59 1.61e-13 63.5
Msa1185320 MtrunA17_Chr1g0206691 49.153 59 30 0 11 69 1 59 2.89e-13 66.2
Msa1185320 MtrunA17_Chr4g0071601 36.735 98 59 1 15 112 25 119 3.45e-13 65.5
Msa1185320 MtrunA17_Chr4g0060841 43.662 71 38 1 1 69 1 71 6.16e-13 66.6
Msa1185320 MtrunA17_Chr3g0085241 43.284 67 38 0 3 69 42 108 7.41e-13 65.5
Msa1185320 MtrunA17_Chr2g0308271 29.661 118 81 2 54 171 27 142 1.55e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185320 AT2G45660.1 65.438 217 56 4 1 206 1 209 1.70e-90 265
Msa1185320 AT2G45660.2 75.155 161 35 2 1 159 1 158 1.88e-82 243
Msa1185320 AT5G62165.3 56.808 213 78 3 1 206 1 206 1.69e-79 237
Msa1185320 AT5G62165.1 56.808 213 78 3 1 206 1 206 1.69e-79 237
Msa1185320 AT5G62165.2 56.808 213 78 3 1 206 1 206 1.69e-79 237
Msa1185320 AT4G22950.3 58.447 219 84 3 1 215 1 216 3.73e-76 229
Msa1185320 AT4G22950.1 58.447 219 84 3 1 215 1 216 3.73e-76 229
Msa1185320 AT4G22950.2 65.497 171 57 1 1 171 1 169 2.84e-74 222
Msa1185320 AT5G62165.17 63.694 157 56 1 1 157 1 156 6.94e-71 213
Msa1185320 AT5G62165.12 63.694 157 56 1 1 157 1 156 6.94e-71 213
Msa1185320 AT5G62165.11 63.694 157 56 1 1 157 1 156 6.94e-71 213
Msa1185320 AT4G11880.4 57.273 220 87 3 1 215 1 218 4.24e-70 213
Msa1185320 AT4G11880.1 57.273 220 87 3 1 215 1 218 4.24e-70 213
Msa1185320 AT5G62165.10 53.052 213 72 4 1 206 1 192 3.00e-69 210
Msa1185320 AT5G62165.4 53.052 213 72 4 1 206 1 192 3.00e-69 210
Msa1185320 AT4G11880.2 65.823 158 51 2 1 157 1 156 1.39e-67 206
Msa1185320 AT4G11880.3 65.823 158 51 2 1 157 1 156 1.39e-67 206
Msa1185320 AT5G62165.6 60.927 151 58 1 1 151 1 150 2.03e-65 199
Msa1185320 AT5G62165.9 60.927 151 58 1 1 151 1 150 2.03e-65 199
Msa1185320 AT5G62165.7 60.927 151 58 1 1 151 1 150 2.03e-65 199
Msa1185320 AT5G62165.8 60.927 151 58 1 1 151 1 150 2.03e-65 199
Msa1185320 AT5G62165.13 60.927 151 58 1 1 151 1 150 2.03e-65 199
Msa1185320 AT5G51870.1 49.761 209 102 1 1 209 1 206 5.57e-64 197
Msa1185320 AT5G51870.4 47.964 221 100 2 1 209 1 218 1.33e-61 192
Msa1185320 AT5G51870.3 47.964 221 100 2 1 209 11 228 1.68e-61 192
Msa1185320 AT5G51860.1 46.698 212 108 2 1 209 1 210 3.08e-58 183
Msa1185320 AT5G51860.2 47.368 209 102 3 1 209 1 201 5.85e-57 179
Msa1185320 AT4G18960.1 50.286 175 86 1 3 177 19 192 1.76e-51 167
Msa1185320 AT5G51870.2 55.862 145 64 0 1 145 1 145 4.30e-51 163
Msa1185320 AT3G58780.5 48.023 177 91 1 1 177 22 197 7.53e-51 166
Msa1185320 AT3G58780.1 48.023 177 91 1 1 177 16 191 7.55e-51 165
Msa1185320 AT4G09960.1 49.153 177 89 1 1 177 1 176 1.51e-50 164
Msa1185320 AT4G09960.6 49.153 177 89 1 1 177 2 177 1.66e-50 164
Msa1185320 AT5G51870.5 55.862 145 64 0 1 145 24 168 1.74e-50 162
Msa1185320 AT4G09960.5 49.153 177 89 1 1 177 11 186 2.15e-50 164
Msa1185320 AT4G09960.3 49.153 177 89 1 1 177 27 202 6.42e-50 163
Msa1185320 AT2G42830.1 48.521 169 86 1 3 171 18 185 1.51e-49 162
Msa1185320 AT2G45650.1 52.381 168 78 1 1 168 1 166 1.59e-49 162
Msa1185320 AT2G42830.2 48.466 163 83 1 3 165 18 179 3.33e-48 159
Msa1185320 AT4G09960.2 53.846 143 65 1 1 143 1 142 1.26e-47 156
Msa1185320 AT2G03710.3 45.143 175 92 2 1 173 1 173 1.37e-47 155
Msa1185320 AT3G61120.1 50.932 161 76 1 1 161 1 158 4.30e-47 155
Msa1185320 AT4G09960.4 51.974 152 72 1 1 152 96 246 5.94e-47 157
Msa1185320 AT2G03710.1 45.509 167 87 2 1 165 1 165 1.52e-46 154
Msa1185320 AT3G58780.4 53.147 143 66 1 3 145 18 159 1.67e-46 155
Msa1185320 AT2G03710.2 45.509 167 87 2 1 165 1 165 1.81e-46 154
Msa1185320 AT1G69120.2 48.837 172 86 2 1 171 1 171 1.02e-45 152
Msa1185320 AT3G58780.2 45.763 177 88 2 1 177 16 184 1.14e-45 152
Msa1185320 AT3G02310.1 44.221 199 95 5 1 190 1 192 2.53e-45 151
Msa1185320 AT1G69120.1 48.837 172 86 2 1 171 1 171 3.07e-45 151
Msa1185320 AT3G58780.3 42.079 202 91 2 1 177 16 216 3.21e-45 152
Msa1185320 AT3G02310.2 47.222 180 81 4 1 173 1 173 4.75e-45 149
Msa1185320 AT1G24260.1 48.824 170 85 2 1 168 1 170 9.52e-45 150
Msa1185320 AT1G24260.2 49.711 173 80 4 1 168 1 171 1.20e-44 149
Msa1185320 AT5G15800.1 47.191 178 80 4 1 171 1 171 3.24e-44 148
Msa1185320 AT1G26310.1 47.977 173 88 2 1 171 1 173 3.45e-44 148
Msa1185320 AT5G60910.1 43.939 198 107 3 1 197 1 195 4.79e-44 147
Msa1185320 AT5G15800.2 47.191 178 80 4 1 171 1 171 5.62e-44 148
Msa1185320 AT1G24260.3 50.617 162 73 4 1 157 1 160 9.23e-43 144
Msa1185320 AT3G57230.1 44.444 171 93 1 1 171 1 169 1.04e-41 142
Msa1185320 AT3G57230.4 44.444 171 93 1 1 171 1 169 1.04e-41 142
Msa1185320 AT4G37940.1 43.931 173 91 3 1 171 1 169 1.12e-40 139
Msa1185320 AT5G13790.2 45.238 168 87 1 1 168 1 163 6.68e-40 138
Msa1185320 AT3G57230.2 47.222 144 74 1 1 144 1 142 1.36e-39 133
Msa1185320 AT3G30260.1 47.712 153 76 3 1 151 1 151 4.37e-39 135
Msa1185320 AT5G13790.1 44.643 168 85 1 1 168 1 160 2.22e-38 134
Msa1185320 AT5G62165.14 67.442 86 28 0 1 86 1 86 3.37e-38 128
Msa1185320 AT4G24540.1 38.839 224 112 6 1 206 1 217 4.01e-38 132
Msa1185320 AT4G37940.4 42.775 173 93 3 1 171 1 169 1.21e-37 130
Msa1185320 AT2G22630.1 43.931 173 91 3 1 171 1 169 1.74e-37 130
Msa1185320 AT2G22630.2 43.931 173 91 3 1 171 1 169 1.74e-37 130
Msa1185320 AT4G37940.3 46.309 149 74 3 1 147 1 145 4.22e-37 128
Msa1185320 AT5G23260.2 44.311 167 87 4 1 165 1 163 7.43e-36 127
Msa1185320 AT5G23260.4 44.311 167 87 4 1 165 17 179 1.24e-35 127
Msa1185320 AT2G22540.3 41.860 172 91 2 1 168 1 167 5.98e-34 122
Msa1185320 AT2G22540.1 41.860 172 91 2 1 168 1 167 5.98e-34 122
Msa1185320 AT5G10140.4 42.500 160 78 3 1 157 1 149 2.25e-33 118
Msa1185320 AT3G57390.3 39.779 181 89 3 1 168 1 174 2.97e-33 119
Msa1185320 AT3G57390.1 39.779 181 89 3 1 168 1 174 6.18e-33 119
Msa1185320 AT5G23260.1 44.311 167 82 5 1 165 17 174 8.43e-33 119
Msa1185320 AT5G10140.1 40.191 209 106 5 1 206 1 193 1.75e-32 117
Msa1185320 AT2G14210.1 43.787 169 92 3 1 168 1 167 2.15e-32 117
Msa1185320 AT2G14210.2 43.787 169 92 3 1 168 1 167 2.30e-32 117
Msa1185320 AT5G23260.3 45.695 151 76 4 1 149 1 147 3.59e-32 117
Msa1185320 AT5G65060.3 39.412 170 93 3 1 169 1 161 1.43e-31 114
Msa1185320 AT5G65070.1 39.899 198 105 3 1 195 1 187 1.54e-31 114
Msa1185320 AT1G71692.1 40.761 184 100 3 1 176 1 183 1.60e-31 114
Msa1185320 AT5G65060.1 39.412 170 93 3 1 169 1 161 2.15e-31 114
Msa1185320 AT5G65070.2 37.615 218 113 3 1 195 1 218 2.88e-31 114
Msa1185320 AT5G10140.2 41.830 153 79 2 1 152 1 144 6.35e-31 112
Msa1185320 AT3G54340.1 40.491 163 87 3 1 160 1 156 7.15e-31 113
Msa1185320 AT5G10140.3 41.830 153 79 2 1 152 1 144 1.40e-30 111
Msa1185320 AT5G65050.2 39.645 169 92 3 1 168 1 160 6.16e-30 109
Msa1185320 AT5G65050.3 39.645 169 92 3 1 168 1 160 3.02e-29 108
Msa1185320 AT5G65070.3 36.530 219 115 3 1 195 1 219 5.79e-29 108
Msa1185320 AT1G77080.4 40.884 181 87 3 1 175 1 167 1.38e-28 106
Msa1185320 AT5G65060.2 38.235 170 84 4 1 169 1 150 1.45e-28 106
Msa1185320 AT1G77080.11 41.714 175 82 3 1 169 1 161 2.00e-28 105
Msa1185320 AT1G77080.5 41.714 175 82 3 1 169 1 161 2.55e-28 105
Msa1185320 AT5G65050.1 37.968 187 101 5 1 181 1 178 2.75e-28 105
Msa1185320 AT2G22540.2 38.953 172 91 3 1 168 1 162 3.50e-28 106
Msa1185320 AT5G65070.5 38.333 180 88 3 1 157 1 180 1.59e-27 104
Msa1185320 AT1G77080.2 41.714 175 90 2 1 175 1 163 4.49e-27 102
Msa1185320 AT1G31140.2 38.554 166 95 2 1 159 1 166 1.39e-26 102
Msa1185320 AT5G65050.5 38.462 169 83 4 1 168 1 149 1.89e-26 100
Msa1185320 AT5G65080.3 38.608 158 87 3 1 157 8 156 2.80e-26 100
Msa1185320 AT5G20240.2 37.162 148 85 3 1 146 1 142 3.25e-26 99.4
Msa1185320 AT5G20240.1 36.913 149 86 3 1 147 1 143 4.63e-26 100
Msa1185320 AT5G65070.4 41.333 150 74 3 1 147 1 139 5.21e-26 98.6
Msa1185320 AT1G31140.1 38.554 166 93 3 1 159 1 164 6.63e-26 100
Msa1185320 AT5G65080.2 37.000 200 109 5 1 193 8 197 3.59e-25 98.2
Msa1185320 AT1G77080.8 39.691 194 98 4 1 175 1 194 7.66e-25 97.8
Msa1185320 AT1G77080.12 42.138 159 80 2 1 159 1 147 4.99e-24 93.6
Msa1185320 AT5G62165.15 48.077 104 41 2 110 206 56 153 3.18e-23 91.7
Msa1185320 AT5G62165.5 48.077 104 41 2 110 206 56 153 3.18e-23 91.7
Msa1185320 AT1G77980.1 58.333 72 29 1 1 71 1 72 6.27e-21 89.4
Msa1185320 AT1G22130.1 58.333 72 29 1 1 71 1 72 1.47e-20 88.6
Msa1185320 AT5G60440.1 32.941 170 82 5 3 156 8 161 3.03e-19 84.3
Msa1185320 AT1G77950.3 28.646 192 97 3 1 152 1 192 1.24e-18 82.0
Msa1185320 AT1G77950.2 28.646 192 97 3 1 152 1 192 1.24e-18 82.0
Msa1185320 AT1G77950.1 28.646 192 97 3 1 152 1 192 1.24e-18 82.0
Msa1185320 AT1G77950.4 28.646 192 97 3 1 152 1 192 1.24e-18 82.0
Msa1185320 AT4G37435.1 54.545 66 30 0 1 66 1 66 8.06e-18 78.2
Msa1185320 AT4G36590.1 53.623 69 32 0 3 71 8 76 1.82e-17 78.6
Msa1185320 AT3G66656.1 46.479 71 38 0 1 71 1 71 1.03e-16 75.1
Msa1185320 AT2G34440.1 44.928 69 38 0 1 69 1 69 3.77e-16 73.6
Msa1185320 AT1G18750.4 49.296 71 34 1 1 69 1 71 9.32e-16 75.5
Msa1185320 AT1G18750.1 49.296 71 34 1 1 69 1 71 1.09e-15 75.1
Msa1185320 AT1G18750.3 49.296 71 34 1 1 69 1 71 1.21e-15 75.1
Msa1185320 AT2G24840.1 42.105 95 49 2 3 91 64 158 2.55e-15 73.2
Msa1185320 AT1G01530.1 45.588 68 37 0 1 68 6 73 3.04e-15 72.8
Msa1185320 AT2G03060.2 28.641 206 114 5 1 181 1 198 6.30e-15 73.2
Msa1185320 AT2G03060.3 28.641 206 114 5 1 181 1 198 6.55e-15 73.2
Msa1185320 AT2G03060.7 28.641 206 114 5 1 181 1 198 6.55e-15 73.2
Msa1185320 AT2G03060.1 28.641 206 114 5 1 181 1 198 6.55e-15 73.2
Msa1185320 AT1G69540.1 28.571 182 99 4 1 154 1 179 1.37e-14 72.0
Msa1185320 AT1G69540.2 28.571 182 99 4 1 154 1 179 1.99e-14 71.6
Msa1185320 AT4G18960.3 33.588 131 85 2 48 177 49 178 3.31e-14 69.7
Msa1185320 AT4G18960.2 33.588 131 85 2 48 177 49 178 3.31e-14 69.7
Msa1185320 AT3G04100.1 42.857 70 40 0 5 74 17 86 5.18e-14 68.6
Msa1185320 AT1G65360.1 41.176 68 40 0 3 70 8 75 7.33e-14 68.6
Msa1185320 AT1G72350.1 42.045 88 49 1 3 90 44 129 2.62e-13 67.0
Msa1185320 AT1G47760.1 36.190 105 56 2 1 101 1 98 3.16e-13 65.9
Msa1185320 AT5G62165.16 40.385 104 35 3 110 206 56 139 3.22e-13 65.1
Msa1185320 AT4G18960.4 32.800 125 82 2 48 171 49 172 7.26e-13 65.1
Msa1185320 AT1G28460.1 47.761 67 35 0 5 71 11 77 7.56e-13 64.7
Msa1185320 AT1G69120.3 37.736 106 65 1 66 171 5 109 1.36e-12 64.3
Msa1185320 AT1G29962.1 46.269 67 36 0 5 71 11 77 2.34e-12 63.5
Msa1185320 AT1G28450.1 43.284 67 38 0 5 71 11 77 6.95e-11 59.7

Find 70 sgRNAs with CRISPR-Local

Find 670 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCGTCTTGTTCTTGTTTC+TGG 0.122694 8_1:+22365260 None:intergenic
CAATCATTTATTTCTTAATA+TGG 0.167043 8_1:-22376344 Msa1185320:five_prime_UTR
CGGTATCGTTCAATCGTTTC+TGG 0.172599 8_1:+22369636 None:intergenic
CCTTGAACTTACCTCAATTA+TGG 0.183089 8_1:-22376206 Msa1185320:five_prime_UTR
CAATTATGGATCACTACTTT+TGG 0.236017 8_1:-22376192 Msa1185320:five_prime_UTR
CAAAGAAAATATATGTATAA+AGG 0.264770 8_1:+22376081 None:intergenic
GAAACAGATTTGCACCAAAT+TGG 0.280301 8_1:+22376052 None:intergenic
CATTCCCTCAGGAAACTCTT+AGG 0.282812 8_1:-22366481 Msa1185320:intron
AAACTCATAATTGCTTGTTT+TGG 0.291781 8_1:+22376386 None:intergenic
TCAAGGAAAAGGATTGGATT+TGG 0.305240 8_1:+22376223 None:intergenic
TGGGGTCAGGTTGATTAATA+AGG 0.339508 8_1:-22376299 Msa1185320:five_prime_UTR
GTGCCTAGAACAGGAAAATA+AGG 0.354778 8_1:+22376107 None:intergenic
GCATAGTCAGAGGGATTAAT+CGG 0.403673 8_1:+22365210 None:intergenic
AAAGAAAATATATGTATAAA+GGG 0.409393 8_1:+22376082 None:intergenic
CATTTATTTCTTAATATGGT+GGG 0.422909 8_1:-22376340 Msa1185320:five_prime_UTR
ACATTCTCAAAGAGAAGAAA+TGG 0.428741 8_1:-22375470 Msa1185320:CDS
TAAAGGGTTGTGCCTAGAAC+AGG 0.433795 8_1:+22376098 None:intergenic
TTGAGGTAAGTTCAAGGAAA+AGG 0.435373 8_1:+22376212 None:intergenic
AAACTCTTAGGAGAAGGTCT+AGG 0.447821 8_1:-22366469 Msa1185320:CDS
GTTGATTAATAAGGAAAGGT+AGG 0.449740 8_1:-22376290 Msa1185320:five_prime_UTR
GCAAGAAAAGCAATTTCAAA+AGG 0.455026 8_1:+22376030 None:intergenic
TCCTCAACTAGCTACACCTT+TGG 0.462501 8_1:+22365233 None:intergenic
GTAAGTTCAAGGAAAAGGAT+TGG 0.474181 8_1:+22376217 None:intergenic
TATACAATGCAAATGTAGTA+AGG 0.483810 8_1:-22365022 Msa1185320:three_prime_UTR
AAGCAAAATTCGAGCAAGAA+AGG 0.486364 8_1:-22366392 Msa1185320:intron
AATTGAGCAGCTAAAGGAAA+AGG 0.487373 8_1:-22366272 Msa1185320:intron
TCATTTATTTCTTAATATGG+TGG 0.491560 8_1:-22376341 Msa1185320:five_prime_UTR
GGGTAGCTGTAGAAGCAAGA+TGG 0.499150 8_1:-22376319 Msa1185320:five_prime_UTR
TTATATATTACAGCAATTGA+AGG 0.500168 8_1:-22366657 Msa1185320:intron
TCAGTCTCCACATCTGAACT+TGG 0.501611 8_1:+22365299 None:intergenic
GTGGAGACTGAATTGTTCAT+TGG 0.509005 8_1:-22365287 Msa1185320:CDS
TGTAGAAGCAAGATGGGGTC+AGG 0.510040 8_1:-22376312 Msa1185320:five_prime_UTR
TCAACTGATTCAGATGGTGT+TGG 0.512523 8_1:+22369588 None:intergenic
ATATGACCCGTGCGGTAGCA+CGG 0.520929 8_1:+22365042 None:intergenic
ACAGGAAAATAAGGAAGGGA+AGG 0.522973 8_1:+22376116 None:intergenic
GGTAGCTGTAGAAGCAAGAT+GGG 0.536589 8_1:-22376318 Msa1185320:five_prime_UTR
CCATAATTGAGGTAAGTTCA+AGG 0.537835 8_1:+22376206 None:intergenic
ATCATTCAGATAGATAATAG+TGG 0.540306 8_1:-22365111 Msa1185320:three_prime_UTR
AACTCTTAGGAGAAGGTCTA+GGG 0.544433 8_1:-22366468 Msa1185320:CDS
GGAACAAATTGAGCAGCTAA+AGG 0.548309 8_1:-22366278 Msa1185320:CDS
TGAATCAGTTGAAAATACTC+AGG 0.553467 8_1:-22369577 Msa1185320:intron
TCCAAAGGTGTAGCTAGTTG+AGG 0.555857 8_1:-22365234 Msa1185320:exon
CTAGAACAGGAAAATAAGGA+AGG 0.556487 8_1:+22376111 None:intergenic
CACAGGAAGCAACAAATGAT+CGG 0.559990 8_1:-22365367 Msa1185320:intron
TGTTGGAGTGCTATTAATCC+TGG 0.562354 8_1:+22369605 None:intergenic
GACCCGTGCGGTAGCACGGG+TGG 0.563565 8_1:+22365046 None:intergenic
CTCAGGAAACTCTTAGGAGA+AGG 0.565759 8_1:-22366475 Msa1185320:intron
TCAGGTTGATTAATAAGGAA+AGG 0.569044 8_1:-22376294 Msa1185320:five_prime_UTR
AATTCATATAGCCTCCCTCT+TGG 0.571136 8_1:+22375380 None:intergenic
TATGACCCGTGCGGTAGCAC+GGG 0.571184 8_1:+22365043 None:intergenic
ATTTATTTCTTAATATGGTG+GGG 0.573784 8_1:-22376339 Msa1185320:five_prime_UTR
ACACAACACTGATAATTCAA+AGG 0.574104 8_1:+22375433 None:intergenic
TTCCACCCGTGCTACCGCAC+GGG 0.574518 8_1:-22365048 Msa1185320:three_prime_UTR
ATTTACCTTCTCTGTGAGCA+TGG 0.576272 8_1:+22365694 None:intergenic
AACGATACCGCAATCATACC+AGG 0.576369 8_1:-22369623 Msa1185320:CDS
GGACTACTTTGATCTGCAGA+AGG 0.576693 8_1:+22365320 None:intergenic
TATATGAATTTGCTAGCTCT+AGG 0.581552 8_1:-22375367 Msa1185320:intron
ATCAGTGTTGTGTGATGCTG+AGG 0.585355 8_1:-22375423 Msa1185320:CDS
CAGGAAAATAAGGAAGGGAA+GGG 0.585818 8_1:+22376117 None:intergenic
TTTCCACCCGTGCTACCGCA+CGG 0.587270 8_1:-22365049 Msa1185320:three_prime_UTR
ACCTTCTTGAGACTTCAAAA+CGG 0.589369 8_1:-22366604 Msa1185320:intron
AAATGCCATGCTCACAGAGA+AGG 0.595558 8_1:-22365699 Msa1185320:intron
AAGTAGTCCAAGTTCAGATG+TGG 0.602735 8_1:-22365306 Msa1185320:CDS
AACAAGACGCATTTCTCCAA+AGG 0.605530 8_1:-22365249 Msa1185320:CDS
AAAGTAGTGATCCATAATTG+AGG 0.623208 8_1:+22376195 None:intergenic
TAGAACAGGAAAATAAGGAA+GGG 0.626087 8_1:+22376112 None:intergenic
GTATAGAGAACGCAACAAGT+AGG 0.642404 8_1:-22375499 Msa1185320:CDS
TATTAATCCTGGTATGATTG+CGG 0.644304 8_1:+22369616 None:intergenic
TGCATTGTATATGACCCGTG+CGG 0.755286 8_1:+22365034 None:intergenic
GTAGCTGTAGAAGCAAGATG+GGG 0.755472 8_1:-22376317 Msa1185320:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTAAAAAAATTTA+GGG + chr8_1:22369227-22369246 None:intergenic 0.0%
!!! TAAATTTTTTTAATAATAAT+CGG - chr8_1:22369227-22369246 Msa1185320:intron 0.0%
!! AAAGAAAATATATGTATAAA+GGG + chr8_1:22365266-22365285 None:intergenic 10.0%
!!! TAATTTTCTTTTTTAAACTA+CGG - chr8_1:22366151-22366170 Msa1185320:intron 10.0%
!!! CATTTTTCATTTTTAAATTA+CGG + chr8_1:22366280-22366299 None:intergenic 10.0%
!! ATATAATCAATAAAAAAAGT+GGG - chr8_1:22366823-22366842 Msa1185320:intron 10.0%
!!! TTAGGTTTTTTTTTTTTTTA+AGG - chr8_1:22367444-22367463 Msa1185320:intron 10.0%
!!! TGTTATATTTTTCTTTTAAA+GGG + chr8_1:22368780-22368799 None:intergenic 10.0%
!!! TGTTATATTTTTCTTTTAAA+GGG + chr8_1:22368780-22368799 None:intergenic 10.0%
!!! TTATTTCAATAAGTTTTAAT+TGG - chr8_1:22369831-22369850 Msa1185320:intron 10.0%
!!! AAAGCATAAATATTTTTAAA+TGG + chr8_1:22369984-22370003 None:intergenic 10.0%
!! TCGAAAAATAAAATAAAATT+AGG - chr8_1:22371438-22371457 Msa1185320:intron 10.0%
!! CGAAAAATAAAATAAAATTA+GGG - chr8_1:22371439-22371458 Msa1185320:intron 10.0%
!! TATTATAATAAAATTGTAGT+AGG + chr8_1:22372307-22372326 None:intergenic 10.0%
!!! TATACTAATAGTTTTTTTTA+AGG - chr8_1:22372447-22372466 Msa1185320:intron 10.0%
!! AAAAAAAAAAAAAAAACTGA+AGG + chr8_1:22372573-22372592 None:intergenic 10.0%
!!! AAAAACTTTAAAATAATGAA+AGG + chr8_1:22372728-22372747 None:intergenic 10.0%
!!! AAATACTTTAAAATAATGAA+AGG + chr8_1:22372809-22372828 None:intergenic 10.0%
!!! CGTAAAATTTAAAATTATAT+AGG + chr8_1:22375000-22375019 None:intergenic 10.0%
!!! CAATCATTTATTTCTTAATA+TGG - chr8_1:22365001-22365020 Msa1185320:three_prime_UTR 15.0%
!! TAAAAAATGAATAAGAGTTA+AGG + chr8_1:22365208-22365227 None:intergenic 15.0%
!! CAAAGAAAATATATGTATAA+AGG + chr8_1:22365267-22365286 None:intergenic 15.0%
!!! TATTTGATGACTAAATTAAA+TGG + chr8_1:22365429-22365448 None:intergenic 15.0%
!! ATGAGATCAATTAAAAATTA+AGG + chr8_1:22366599-22366618 None:intergenic 15.0%
!! CATATAATCAATAAAAAAAG+TGG - chr8_1:22366822-22366841 Msa1185320:intron 15.0%
!! TATTATGATTTCAATATCAT+GGG + chr8_1:22366951-22366970 None:intergenic 15.0%
!! TTATTATGATTTCAATATCA+TGG + chr8_1:22366952-22366971 None:intergenic 15.0%
!!! CTTTTTGTACTTTTTTTAAA+TGG + chr8_1:22367024-22367043 None:intergenic 15.0%
!!! ATGTTGTTATGTTTTTATTT+TGG + chr8_1:22367072-22367091 None:intergenic 15.0%
!! TTAAAATTATCTCTATTTCA+TGG + chr8_1:22367141-22367160 None:intergenic 15.0%
!! ACACTATTAATTATTTAATG+TGG + chr8_1:22367575-22367594 None:intergenic 15.0%
!!! TCAATCATTAATTTCATTTT+TGG - chr8_1:22367940-22367959 Msa1185320:intron 15.0%
!!! CAATCATTAATTTCATTTTT+GGG - chr8_1:22367941-22367960 Msa1185320:intron 15.0%
!! ATAATGAGAATTATGATTAA+TGG - chr8_1:22368285-22368304 Msa1185320:intron 15.0%
!!! GTGTTATATTTTTCTTTTAA+AGG + chr8_1:22368781-22368800 None:intergenic 15.0%
!!! GTGTTATATTTTTCTTTTAA+AGG + chr8_1:22368781-22368800 None:intergenic 15.0%
!! ATATATACTGTAGATATAAT+CGG - chr8_1:22369170-22369189 Msa1185320:intron 15.0%
!!! TTAGAACACAATTTTTTTTA+GGG + chr8_1:22369196-22369215 None:intergenic 15.0%
!!! AATTTATTTTGTACAATCAA+TGG + chr8_1:22369257-22369276 None:intergenic 15.0%
!!! TATATAGCTTTGTTTTAAAA+AGG + chr8_1:22370824-22370843 None:intergenic 15.0%
!! ATTTCTCAATTAAAAAAATC+TGG - chr8_1:22371175-22371194 Msa1185320:intron 15.0%
!! AAAGTTATTGTTAGAAAATT+AGG + chr8_1:22371255-22371274 None:intergenic 15.0%
!! TAACTGATTGTATAATAATA+CGG - chr8_1:22371326-22371345 Msa1185320:intron 15.0%
!! AATACTATCTACTATAATTA+GGG + chr8_1:22371361-22371380 None:intergenic 15.0%
!! TAATACTATCTACTATAATT+AGG + chr8_1:22371362-22371381 None:intergenic 15.0%
!! AGTAAAAATGAAATATCAAT+AGG + chr8_1:22371533-22371552 None:intergenic 15.0%
!!! GTATATATTTTCTTAATACT+TGG - chr8_1:22371644-22371663 Msa1185320:intron 15.0%
!!! AAAAAGTACTATTTAATTTC+TGG + chr8_1:22371866-22371885 None:intergenic 15.0%
!! GAATTTAGATGAAATAATAA+GGG + chr8_1:22372276-22372295 None:intergenic 15.0%
!! TAAAAAAAAAAAATAGACAG+TGG + chr8_1:22372347-22372366 None:intergenic 15.0%
!!! TATTATTTTTTTTAAGCTCA+CGG - chr8_1:22372630-22372649 Msa1185320:intron 15.0%
!! ATAAATGTAAAATGACATAA+AGG + chr8_1:22372909-22372928 None:intergenic 15.0%
!! ACAATTTCATTTCAATATTA+TGG + chr8_1:22373082-22373101 None:intergenic 15.0%
!! ATGTTACAAATATATAGTAT+AGG + chr8_1:22373359-22373378 None:intergenic 15.0%
!!! TTTTTCAGTTTTTTGTTTTA+GGG - chr8_1:22374008-22374027 Msa1185320:intron 15.0%
!!! ATAATTTTTCTTTCCAAATT+GGG + chr8_1:22374237-22374256 None:intergenic 15.0%
!!! AATAATTTTTCTTTCCAAAT+TGG + chr8_1:22374238-22374257 None:intergenic 15.0%
!!! ACTATTTTATGTCATTATAA+GGG + chr8_1:22374332-22374351 None:intergenic 15.0%
!!! AACTATTTTATGTCATTATA+AGG + chr8_1:22374333-22374352 None:intergenic 15.0%
!! AAGTTGTTTATATATTTAAC+AGG - chr8_1:22375097-22375116 Msa1185320:intron 15.0%
!!! AAAAATGTTTGTTATCAATT+AGG - chr8_1:22375152-22375171 Msa1185320:intron 15.0%
!!! ACTAATCAAATTTTGAATAA+AGG + chr8_1:22375340-22375359 None:intergenic 15.0%
!!! AATTATTTTGAATACAATTC+AGG - chr8_1:22375604-22375623 Msa1185320:intron 15.0%
!! GGAAATTTATTAATGTAAAA+AGG - chr8_1:22375774-22375793 Msa1185320:intron 15.0%
!! AGATGATAAAAAAATGAAAA+AGG + chr8_1:22375832-22375851 None:intergenic 15.0%
!!! TCATTTATTTCTTAATATGG+TGG - chr8_1:22365004-22365023 Msa1185320:three_prime_UTR 20.0%
!!! CATTTATTTCTTAATATGGT+GGG - chr8_1:22365005-22365024 Msa1185320:three_prime_UTR 20.0%
!!! ATTTATTTCTTAATATGGTG+GGG - chr8_1:22365006-22365025 Msa1185320:three_prime_UTR 20.0%
!!! CTTTTCTGATTAATTGATAT+AGG + chr8_1:22365353-22365372 None:intergenic 20.0%
!! AAAAGCTCTTAAATCTTTAT+AGG - chr8_1:22365368-22365387 Msa1185320:intron 20.0%
!!! TTTTTGTTACGAATTGAAAT+AGG - chr8_1:22365690-22365709 Msa1185320:intron 20.0%
!! AAACAAGAACAACATAAATT+AGG + chr8_1:22365769-22365788 None:intergenic 20.0%
!! AGCAAAGAAAAGAAAAAAAA+TGG - chr8_1:22365799-22365818 Msa1185320:intron 20.0%
!! ACATAGTAGATATAATGAAA+AGG - chr8_1:22366674-22366693 Msa1185320:intron 20.0%
!!! TTATGTTTTTATTTTGGTCT+TGG + chr8_1:22367066-22367085 None:intergenic 20.0%
!! AAATATTCACAAGATATTGT+AGG + chr8_1:22367394-22367413 None:intergenic 20.0%
!! ATACCGTAAATATTTATACT+TGG - chr8_1:22367419-22367438 Msa1185320:intron 20.0%
!! TACCGTAAATATTTATACTT+GGG - chr8_1:22367420-22367439 Msa1185320:intron 20.0%
!! AACCCAAGTATAAATATTTA+CGG + chr8_1:22367425-22367444 None:intergenic 20.0%
!! AAATATTTATACTTGGGTTT+AGG - chr8_1:22367426-22367445 Msa1185320:intron 20.0%
!! TTTATGTAAAAAATAGCCTT+GGG + chr8_1:22367648-22367667 None:intergenic 20.0%
!!! TTTTATGTAAAAAATAGCCT+TGG + chr8_1:22367649-22367668 None:intergenic 20.0%
!! ACAAAATATTAATTCGAGAT+GGG - chr8_1:22368494-22368513 Msa1185320:intron 20.0%
!!! AACTTCAAAGATATATCTTT+TGG - chr8_1:22368912-22368931 Msa1185320:intron 20.0%
!! TTAACATTATCGAATTAGTT+TGG + chr8_1:22368971-22368990 None:intergenic 20.0%
!! TTTACATGTAAGAATTCATA+CGG - chr8_1:22369145-22369164 Msa1185320:intron 20.0%
!!! GTTAGAACACAATTTTTTTT+AGG + chr8_1:22369197-22369216 None:intergenic 20.0%
!! GAACTAAAAAACATCATAAA+AGG + chr8_1:22369469-22369488 None:intergenic 20.0%
!! AAATAAAAAAGAAGGATACT+GGG + chr8_1:22369890-22369909 None:intergenic 20.0%
!! TAAATAAAAAAGAAGGATAC+TGG + chr8_1:22369891-22369910 None:intergenic 20.0%
!! TAATGATTAATGTCATTGTT+TGG + chr8_1:22370034-22370053 None:intergenic 20.0%
!! TCTAATATAGAAGACATAAA+TGG - chr8_1:22370098-22370117 Msa1185320:intron 20.0%
!! GGTAAAAAATTATTTACAAC+TGG + chr8_1:22370803-22370822 None:intergenic 20.0%
!!! AAATTTCTGGAAGAAAAATA+AGG + chr8_1:22371220-22371239 None:intergenic 20.0%
!! AGAGATTATATTATAGAGTA+AGG + chr8_1:22371419-22371438 None:intergenic 20.0%
!! ACATGTGAAAAAATGAAAAT+GGG + chr8_1:22371580-22371599 None:intergenic 20.0%
!! TACATGTGAAAAAATGAAAA+TGG + chr8_1:22371581-22371600 None:intergenic 20.0%
!! AGATTATTCTATTATTGTCT+AGG - chr8_1:22371940-22371959 Msa1185320:intron 20.0%
!! TATAAGCTATAAGCTAATTT+AGG + chr8_1:22372101-22372120 None:intergenic 20.0%
!! GGAATTTAGATGAAATAATA+AGG + chr8_1:22372277-22372296 None:intergenic 20.0%
!! AAAATTGTAGTAGGTAAAAA+TGG + chr8_1:22372298-22372317 None:intergenic 20.0%
!!! TTTGGTGTATTTATTAACAA+GGG + chr8_1:22372389-22372408 None:intergenic 20.0%
!!! AGTGTTATTTTTTTAGTCTA+TGG - chr8_1:22372484-22372503 Msa1185320:intron 20.0%
!! TAATAAAGAACATAACACTA+AGG + chr8_1:22372615-22372634 None:intergenic 20.0%
!! TTAAAATGTAACACAATTGA+TGG + chr8_1:22372695-22372714 None:intergenic 20.0%
!! TTAAAATGTAACACAATTGA+TGG + chr8_1:22372695-22372714 None:intergenic 20.0%
!!! GTTTTTCAGTTTTTTGTTTT+AGG - chr8_1:22374007-22374026 Msa1185320:intron 20.0%
!! TTATATATTACAGCAATTGA+AGG - chr8_1:22374688-22374707 Msa1185320:intron 20.0%
!! TAATCTGTTCATTATAAGTA+AGG + chr8_1:22374827-22374846 None:intergenic 20.0%
!! TGTTTATATATTTAACAGGA+TGG - chr8_1:22375101-22375120 Msa1185320:intron 20.0%
!!! TCAATTTGTTATAAGATTTG+TGG - chr8_1:22375417-22375436 Msa1185320:CDS 20.0%
!!! TGAAGCTTTTTTTATTTTCT+TGG + chr8_1:22375528-22375547 None:intergenic 20.0%
!! TTTCAAGATTTCTATTAATC+TGG + chr8_1:22375727-22375746 None:intergenic 20.0%
!! ACTATGCAAAAGAAAAATAA+GGG - chr8_1:22376151-22376170 Msa1185320:five_prime_UTR 20.0%
!! AAACTCATAATTGCTTGTTT+TGG + chr8_1:22364962-22364981 None:intergenic 25.0%
!!! AATTATGGATCACTACTTTT+GGG - chr8_1:22365154-22365173 Msa1185320:three_prime_UTR 25.0%
!!! TTTCTTTGATTTTGCCAATT+TGG - chr8_1:22365279-22365298 Msa1185320:CDS 25.0%
! AAATAGCTTCCTAGAAAAAA+GGG + chr8_1:22365402-22365421 None:intergenic 25.0%
! AAAATAGCTTCCTAGAAAAA+AGG + chr8_1:22365403-22365422 None:intergenic 25.0%
! AGGAACAAAAATTCTTAGAA+GGG + chr8_1:22365516-22365535 None:intergenic 25.0%
! AAGGAACAAAAATTCTTAGA+AGG + chr8_1:22365517-22365536 None:intergenic 25.0%
!! TCTAAGAATTTTTGTTCCTT+TGG - chr8_1:22365517-22365536 Msa1185320:intron 25.0%
!!! TTTTGTTCCTTTGGTTTTAT+TGG - chr8_1:22365526-22365545 Msa1185320:intron 25.0%
!!! TTTGTTCCTTTGGTTTTATT+GGG - chr8_1:22365527-22365546 Msa1185320:intron 25.0%
! TCTAGAAAGTTATGGAAAAA+TGG + chr8_1:22365597-22365616 None:intergenic 25.0%
!!! CTTTAAGATCTAGAAAGTTA+TGG + chr8_1:22365605-22365624 None:intergenic 25.0%
! CATAACTTTCTAGATCTTAA+AGG - chr8_1:22365603-22365622 Msa1185320:intron 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG + chr8_1:22365642-22365661 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG + chr8_1:22365643-22365662 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG + chr8_1:22365649-22365668 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG - chr8_1:22365658-22365677 Msa1185320:intron 25.0%
! AAAAGAAAAAAAATGGTGAG+AGG - chr8_1:22365806-22365825 Msa1185320:intron 25.0%
! TGGTAATAATTTATTCATCG+AGG - chr8_1:22366072-22366091 Msa1185320:intron 25.0%
! GGTAATAATTTATTCATCGA+GGG - chr8_1:22366073-22366092 Msa1185320:intron 25.0%
! TATCTACTATGTTTCATAAG+AGG + chr8_1:22366666-22366685 None:intergenic 25.0%
! ATCTACATTAACTTTACATG+CGG + chr8_1:22366759-22366778 None:intergenic 25.0%
!!! TAGTGTTTATGTTAGTTTTG+AGG - chr8_1:22366874-22366893 Msa1185320:intron 25.0%
!!! AGTGTTTATGTTAGTTTTGA+GGG - chr8_1:22366875-22366894 Msa1185320:intron 25.0%
!! TTTTGTTGAGTTTATGTGTT+AGG + chr8_1:22367001-22367020 None:intergenic 25.0%
! TTTAATCGAATCATTAGGTT+AGG - chr8_1:22367975-22367994 Msa1185320:intron 25.0%
! TGAGAAATATGAGAAATTGT+TGG + chr8_1:22368145-22368164 None:intergenic 25.0%
!! AAAGCATCATCTTAAAACAT+GGG + chr8_1:22368232-22368251 None:intergenic 25.0%
!! AAGTTTTCTTTTCTGATGAA+AGG - chr8_1:22368308-22368327 Msa1185320:intron 25.0%
! TATAATCTTGTCTACTATGT+GGG - chr8_1:22368351-22368370 Msa1185320:intron 25.0%
! CACAAAATATTAATTCGAGA+TGG - chr8_1:22368493-22368512 Msa1185320:intron 25.0%
! GTATAATTGAGTTCATTCTT+TGG + chr8_1:22369083-22369102 None:intergenic 25.0%
!! TATTTTGTACAATCAATGGA+TGG + chr8_1:22369253-22369272 None:intergenic 25.0%
! ACTAAAGTTAGAACACATAA+TGG + chr8_1:22369295-22369314 None:intergenic 25.0%
! ATAAAAGGTTACCTCTTATT+TGG + chr8_1:22369454-22369473 None:intergenic 25.0%
!!! ATTTTCAAGTGGATTAGAAA+GGG + chr8_1:22369548-22369567 None:intergenic 25.0%
!! TTTGTAGATGTAGTTTTTGT+CGG + chr8_1:22369587-22369606 None:intergenic 25.0%
! AACTACATCTACAAAACTAA+TGG - chr8_1:22369592-22369611 Msa1185320:CDS 25.0%
!!! TTTGAATTGTGAGTTTTGTT+CGG + chr8_1:22369637-22369656 None:intergenic 25.0%
!!! TTGACATTTTAAGAGGAATT+TGG + chr8_1:22369770-22369789 None:intergenic 25.0%
!!! AGTTTTATTCCCTTGTTTAT+GGG + chr8_1:22370078-22370097 None:intergenic 25.0%
!!! AAGTTTTATTCCCTTGTTTA+TGG + chr8_1:22370079-22370098 None:intergenic 25.0%
!! TGACATTGCAATTTTTCTTT+CGG + chr8_1:22370165-22370184 None:intergenic 25.0%
!! TTTTCTTTCGGGATTTTATT+TGG + chr8_1:22370206-22370225 None:intergenic 25.0%
!! TGACATTGCAATTTTTCTTT+CGG + chr8_1:22370165-22370184 None:intergenic 25.0%
!! TTGCAATGTCAAAAAGTTTT+AGG - chr8_1:22370227-22370246 Msa1185320:intron 25.0%
!! TGCAATGTCAAAAAGTTTTA+GGG - chr8_1:22370228-22370247 Msa1185320:intron 25.0%
!! ATGTCTTTTCAATGTAGATA+TGG + chr8_1:22370313-22370332 None:intergenic 25.0%
! TTACTTTGATCCATTACATA+TGG - chr8_1:22370454-22370473 Msa1185320:intron 25.0%
! ATACTTCTTGTTGGAAAATA+TGG - chr8_1:22370516-22370535 Msa1185320:intron 25.0%
! ATCTTAAATTCAATGTCCTA+AGG + chr8_1:22370612-22370631 None:intergenic 25.0%
! TTATTTACAACTGGAATTGA+AGG + chr8_1:22370794-22370813 None:intergenic 25.0%
!! TTTTTGTCTTAATCACTATG+AGG + chr8_1:22370848-22370867 None:intergenic 25.0%
!!! GTTTTTCAATTTGCATCTAA+AGG + chr8_1:22371391-22371410 None:intergenic 25.0%
! AAAAATGAGAAAACACACAA+GGG + chr8_1:22371604-22371623 None:intergenic 25.0%
! AAAAAATGAGAAAACACACA+AGG + chr8_1:22371605-22371624 None:intergenic 25.0%
!! TTAATTTCTGGATGATGAAT+AGG + chr8_1:22371854-22371873 None:intergenic 25.0%
! TATAGATTATTCACCTTCTA+GGG - chr8_1:22372024-22372043 Msa1185320:intron 25.0%
! TTGACAAAAAAAACTCTGTT+TGG - chr8_1:22372135-22372154 Msa1185320:intron 25.0%
! TGAAATAATAAGGGTAAAAG+TGG + chr8_1:22372267-22372286 None:intergenic 25.0%
! ATAGACAGTGGTATTTATTA+TGG + chr8_1:22372335-22372354 None:intergenic 25.0%
!!! GTTTGGTGTATTTATTAACA+AGG + chr8_1:22372390-22372409 None:intergenic 25.0%
!!! GTTGCGTCAATTTTTTTTTA+AGG + chr8_1:22372540-22372559 None:intergenic 25.0%
! TGAAATTGTATTCTACTTCT+AGG - chr8_1:22373093-22373112 Msa1185320:intron 25.0%
! TTAATATTTACTCATTCGTC+CGG - chr8_1:22373154-22373173 Msa1185320:intron 25.0%
! AACTTATCATTTCATCTCAA+AGG + chr8_1:22373282-22373301 None:intergenic 25.0%
!!! AGTGGATTATTTAGTAATGT+GGG + chr8_1:22373329-22373348 None:intergenic 25.0%
!!! TAGTGGATTATTTAGTAATG+TGG + chr8_1:22373330-22373349 None:intergenic 25.0%
! AGCAAATCCTTTCATATAAT+TGG + chr8_1:22374306-22374325 None:intergenic 25.0%
! TCCAAAGATTTCTATGAAAA+TGG - chr8_1:22374428-22374447 Msa1185320:intron 25.0%
!! ACCATTTTCATAGAAATCTT+TGG + chr8_1:22374432-22374451 None:intergenic 25.0%
! AAAGATTTCTATGAAAATGG+TGG - chr8_1:22374431-22374450 Msa1185320:intron 25.0%
!! TACTTTGGTGTATTTAAACA+TGG + chr8_1:22374502-22374521 None:intergenic 25.0%
!! CTTTTATGCAAATCTTACTT+TGG + chr8_1:22374517-22374536 None:intergenic 25.0%
!!! ATTTCAGGCATTGATTATTA+GGG + chr8_1:22374554-22374573 None:intergenic 25.0%
!!! TATTTCAGGCATTGATTATT+AGG + chr8_1:22374555-22374574 None:intergenic 25.0%
! AGGAAATGTTTCAAATATGA+GGG + chr8_1:22374582-22374601 None:intergenic 25.0%
! TATGCTTACTTATTTAGACA+CGG - chr8_1:22374624-22374643 Msa1185320:intron 25.0%
!! AATCTTTTGTAGTTCATCAA+TGG + chr8_1:22374910-22374929 None:intergenic 25.0%
! TCAATTAGGATCACTTTATT+AGG - chr8_1:22375166-22375185 Msa1185320:intron 25.0%
! CAATTAGGATCACTTTATTA+GGG - chr8_1:22375167-22375186 Msa1185320:intron 25.0%
! TTTGAATTATATGTACCAAG+TGG + chr8_1:22375370-22375389 None:intergenic 25.0%
!!! ATTGTGATGCAATTGATTTT+GGG + chr8_1:22375394-22375413 None:intergenic 25.0%
!!! AATTGTGATGCAATTGATTT+TGG + chr8_1:22375395-22375414 None:intergenic 25.0%
! TTTGAATGAGCAAATTTAGT+GGG + chr8_1:22375700-22375719 None:intergenic 25.0%
! CAAATCTTTCAACTATAGAA+TGG - chr8_1:22375919-22375938 Msa1185320:intron 25.0%
! GACTATGCAAAAGAAAAATA+AGG - chr8_1:22376150-22376169 Msa1185320:five_prime_UTR 25.0%
! ATCATTCAGATAGATAATAG+TGG - chr8_1:22376234-22376253 Msa1185320:five_prime_UTR 25.0%
! TATACAATGCAAATGTAGTA+AGG - chr8_1:22376323-22376342 Msa1185320:five_prime_UTR 25.0%
!! TCAGGTTGATTAATAAGGAA+AGG - chr8_1:22365051-22365070 Msa1185320:three_prime_UTR 30.0%
GTTGATTAATAAGGAAAGGT+AGG - chr8_1:22365055-22365074 Msa1185320:three_prime_UTR 30.0%
AAAGTAGTGATCCATAATTG+AGG + chr8_1:22365153-22365172 None:intergenic 30.0%
! CAATTATGGATCACTACTTT+TGG - chr8_1:22365153-22365172 Msa1185320:three_prime_UTR 30.0%
!! ATTATGGATCACTACTTTTG+GGG - chr8_1:22365155-22365174 Msa1185320:three_prime_UTR 30.0%
TAGAACAGGAAAATAAGGAA+GGG + chr8_1:22365236-22365255 None:intergenic 30.0%
GCAAGAAAAGCAATTTCAAA+AGG + chr8_1:22365318-22365337 None:intergenic 30.0%
!! TTTGAAATTGCTTTTCTTGC+TGG - chr8_1:22365318-22365337 Msa1185320:CDS 30.0%
GATGAAAGAAACAAGGAAAT+GGG + chr8_1:22365477-22365496 None:intergenic 30.0%
TATGAAGGATGAAAGAAACA+AGG + chr8_1:22365484-22365503 None:intergenic 30.0%
ACATTCTCAAAGAGAAGAAA+TGG - chr8_1:22365875-22365894 Msa1185320:intron 30.0%
ACACAACACTGATAATTCAA+AGG + chr8_1:22365915-22365934 None:intergenic 30.0%
! TTATTGTTTTCTCACCAAGA+GGG - chr8_1:22365951-22365970 Msa1185320:intron 30.0%
!! TATATGAATTTGCTAGCTCT+AGG - chr8_1:22365978-22365997 Msa1185320:intron 30.0%
! TTCTGAAAATTACTTGCATC+TGG - chr8_1:22366052-22366071 Msa1185320:intron 30.0%
CTAGAGTAAACAAACTCTAA+GGG + chr8_1:22366347-22366366 None:intergenic 30.0%
! TCTAGAGTAAACAAACTCTA+AGG + chr8_1:22366348-22366367 None:intergenic 30.0%
AGAAGTGAGAGAATGAAAAT+AGG - chr8_1:22366398-22366417 Msa1185320:CDS 30.0%
AAAATAAGTCTCACATAACG+TGG + chr8_1:22366786-22366805 None:intergenic 30.0%
AGTTCAACTTAATGTTATGG+TGG + chr8_1:22367195-22367214 None:intergenic 30.0%
GCTAGTTCAACTTAATGTTA+TGG + chr8_1:22367198-22367217 None:intergenic 30.0%
CATACACAGTTAATTAAGTG+AGG - chr8_1:22367294-22367313 Msa1185320:intron 30.0%
TATTCACAAGATATTGTAGG+AGG + chr8_1:22367391-22367410 None:intergenic 30.0%
TCCTATAACATTTATGATGC+AGG - chr8_1:22367507-22367526 Msa1185320:intron 30.0%
CCTATAACATTTATGATGCA+GGG - chr8_1:22367508-22367527 Msa1185320:intron 30.0%
GATGCAGGGTTTAAAAAAAA+TGG - chr8_1:22367522-22367541 Msa1185320:intron 30.0%
!! TTTTTAGCATGACATGATCA+AGG - chr8_1:22367606-22367625 Msa1185320:intron 30.0%
TTGCATCAAAATTGCAATAG+AGG - chr8_1:22367682-22367701 Msa1185320:intron 30.0%
!!! ATTTCATTTTTGGGACTTGT+TGG - chr8_1:22367950-22367969 Msa1185320:intron 30.0%
TGGTGTTTAATCGAATCATT+AGG - chr8_1:22367970-22367989 Msa1185320:intron 30.0%
ATGAGATATGATATGAGAAG+GGG + chr8_1:22368084-22368103 None:intergenic 30.0%
CATGAGATATGATATGAGAA+GGG + chr8_1:22368085-22368104 None:intergenic 30.0%
ACATGAGATATGATATGAGA+AGG + chr8_1:22368086-22368105 None:intergenic 30.0%
!!! GGACTGTTTTTCTTTGTTTT+TGG + chr8_1:22368124-22368143 None:intergenic 30.0%
AAGCATCATCTTAAAACATG+GGG + chr8_1:22368231-22368250 None:intergenic 30.0%
! CAAAGCATCATCTTAAAACA+TGG + chr8_1:22368233-22368252 None:intergenic 30.0%
GTATAATCTTGTCTACTATG+TGG - chr8_1:22368350-22368369 Msa1185320:intron 30.0%
CTTAGGAAATTGTCAAAATC+AGG + chr8_1:22368464-22368483 None:intergenic 30.0%
!! CTGATTTTGACAATTTCCTA+AGG - chr8_1:22368462-22368481 Msa1185320:intron 30.0%
TATTAATTCGAGATGGGAAA+AGG - chr8_1:22368500-22368519 Msa1185320:intron 30.0%
AGCTAAATATGAAAGCTTGT+AGG - chr8_1:22368540-22368559 Msa1185320:intron 30.0%
GTAGGACTACATAGTATAAT+TGG - chr8_1:22368558-22368577 Msa1185320:intron 30.0%
TGATCAAACTTAGATACTTG+TGG - chr8_1:22368593-22368612 Msa1185320:intron 30.0%
GATCAAACTTAGATACTTGT+GGG - chr8_1:22368594-22368613 Msa1185320:intron 30.0%
AACACATGACATGTATAATC+AGG - chr8_1:22368796-22368815 Msa1185320:intron 30.0%
ACACATGACATGTATAATCA+GGG - chr8_1:22368797-22368816 Msa1185320:intron 30.0%
!!! TGGGGTTTTTTAGTTTTTTG+TGG + chr8_1:22369028-22369047 None:intergenic 30.0%
CAAAGATCAACTAATGCATT+AGG + chr8_1:22369117-22369136 None:intergenic 30.0%
CTAATGCATTAGTTGATCTT+TGG - chr8_1:22369115-22369134 Msa1185320:intron 30.0%
!!! ATGTTTTTTAGTTCGAGAGA+AGG - chr8_1:22369475-22369494 Msa1185320:intron 30.0%
!!! GATTTTCAAGTGGATTAGAA+AGG + chr8_1:22369549-22369568 None:intergenic 30.0%
!! TTTGGTATTCGATTTTCAAG+TGG + chr8_1:22369559-22369578 None:intergenic 30.0%
TCTCGAAAACATAACTAGAA+GGG + chr8_1:22369682-22369701 None:intergenic 30.0%
TTCTCGAAAACATAACTAGA+AGG + chr8_1:22369683-22369702 None:intergenic 30.0%
TTCTCGTGACAATTAATTCT+TGG + chr8_1:22369717-22369736 None:intergenic 30.0%
! GAGAATATTTAGACCTTTTG+TGG - chr8_1:22369732-22369751 Msa1185320:intron 30.0%
! GACTAATTTTGTACCACAAA+AGG + chr8_1:22369748-22369767 None:intergenic 30.0%
!! AGACTAGTTGACATTTTAAG+AGG + chr8_1:22369777-22369796 None:intergenic 30.0%
TGTCATTGTTTGGTCTATTT+GGG + chr8_1:22370024-22370043 None:intergenic 30.0%
ATGTCATTGTTTGGTCTATT+TGG + chr8_1:22370025-22370044 None:intergenic 30.0%
!! TTTGGTTTGTTGCATTTGTT+GGG + chr8_1:22370135-22370154 None:intergenic 30.0%
!! ATTTGGTTTGTTGCATTTGT+TGG + chr8_1:22370136-22370155 None:intergenic 30.0%
!!! TTTTCTTTCGGGGTTTTATT+TGG + chr8_1:22370153-22370172 None:intergenic 30.0%
! ACATTGCAATTTTTCTTTCG+GGG + chr8_1:22370163-22370182 None:intergenic 30.0%
! GACATTGCAATTTTTCTTTC+GGG + chr8_1:22370164-22370183 None:intergenic 30.0%
! GACATTGCAATTTTTCTTTC+GGG + chr8_1:22370164-22370183 None:intergenic 30.0%
!!! CAAAAAGTTTTAGGGTTGTT+TGG - chr8_1:22370236-22370255 Msa1185320:intron 30.0%
TAGACTCTAATACTTCTTGT+TGG - chr8_1:22370507-22370526 Msa1185320:intron 30.0%
! AATTCAATGTCCTAAGGTTT+TGG + chr8_1:22370606-22370625 None:intergenic 30.0%
!!! CACATTTTAACTCCAAAAAG+AGG - chr8_1:22370691-22370710 Msa1185320:intron 30.0%
GGTGTAGAAAGAAAATAGTT+TGG + chr8_1:22370893-22370912 None:intergenic 30.0%
! AAAAAGGTTGGATGACTTTT+AGG + chr8_1:22370947-22370966 None:intergenic 30.0%
!!! TTTTGGAAGGGTGTTTAAAT+TGG + chr8_1:22371052-22371071 None:intergenic 30.0%
AGAAATGTGCCTTATCTATT+GGG + chr8_1:22371128-22371147 None:intergenic 30.0%
AAGAAATGTGCCTTATCTAT+TGG + chr8_1:22371129-22371148 None:intergenic 30.0%
GTTAGAAAATTAGGAGTCTT+TGG + chr8_1:22371246-22371265 None:intergenic 30.0%
CTCTGAATTAATAGTCACAT+TGG - chr8_1:22371668-22371687 Msa1185320:intron 30.0%
TATTAATCCTGGTATGATTG+CGG + chr8_1:22371732-22371751 None:intergenic 30.0%
!! GTATTTTCAACTGATTCAGA+TGG + chr8_1:22371766-22371785 None:intergenic 30.0%
TGAATCAGTTGAAAATACTC+AGG - chr8_1:22371768-22371787 Msa1185320:intron 30.0%
!!! AGCAATTTTTTTTTGAGAGG+AGG + chr8_1:22371826-22371845 None:intergenic 30.0%
!!! GACAGCAATTTTTTTTTGAG+AGG + chr8_1:22371829-22371848 None:intergenic 30.0%
GTATAGATTATTCACCTTCT+AGG - chr8_1:22372023-22372042 Msa1185320:intron 30.0%
TGAAAAAAGCTATAAGCTCA+TGG + chr8_1:22372174-22372193 None:intergenic 30.0%
GAATTACAAAGAAAGCTGTT+TGG + chr8_1:22372407-22372426 None:intergenic 30.0%
! TATAAGCTAACTGAAGTGTT+TGG + chr8_1:22372956-22372975 None:intergenic 30.0%
! TTCAATATTATGGCTCTGTT+TGG + chr8_1:22373072-22373091 None:intergenic 30.0%
GCTTAAGGTTAAGAAGTTAA+AGG + chr8_1:22373194-22373213 None:intergenic 30.0%
! TGTTTCTATAAGTAGAATCG+AGG + chr8_1:22373241-22373260 None:intergenic 30.0%
TATAGTATAGGAACTAGTAG+TGG + chr8_1:22373347-22373366 None:intergenic 30.0%
GTAGAGAAAGAATATTGGAA+AGG + chr8_1:22373416-22373435 None:intergenic 30.0%
!!! CAGGTCTTTTGCATTTTTTT+TGG + chr8_1:22374125-22374144 None:intergenic 30.0%
AAAAAAATGCAAAAGACCTG+TGG - chr8_1:22374125-22374144 Msa1185320:intron 30.0%
! TCTGATCAACTCATTTGTTA+GGG - chr8_1:22374160-22374179 Msa1185320:intron 30.0%
AGAGGATCCAATTATATGAA+AGG - chr8_1:22374296-22374315 Msa1185320:intron 30.0%
CAGGAAATGTTTCAAATATG+AGG + chr8_1:22374583-22374602 None:intergenic 30.0%
GAAACATTTCCTGTGTAATT+TGG - chr8_1:22374590-22374609 Msa1185320:intron 30.0%
AATTGAACTCCAAATTACAC+AGG + chr8_1:22374602-22374621 None:intergenic 30.0%
ATTTGTAATTTCATTCCCTC+AGG - chr8_1:22374853-22374872 Msa1185320:intron 30.0%
TTAAATAGCAGTCACGATTA+AGG - chr8_1:22375192-22375211 Msa1185320:intron 30.0%
TGATTAGTATTAATGCCACT+TGG - chr8_1:22375352-22375371 Msa1185320:intron 30.0%
! TTTTTGATGTAATGCTAGCT+GGG + chr8_1:22375575-22375594 None:intergenic 30.0%
AGGTAAATTCACTTTCTATC+TGG - chr8_1:22375666-22375685 Msa1185320:intron 30.0%
TTGAATGAGCAAATTTAGTG+GGG + chr8_1:22375699-22375718 None:intergenic 30.0%
CTTTGAATGAGCAAATTTAG+TGG + chr8_1:22375701-22375720 None:intergenic 30.0%
GAAAAAAGTTCAAATGACGA+CGG - chr8_1:22375753-22375772 Msa1185320:intron 30.0%
AAAGTTACAGCTAGCAAATT+TGG + chr8_1:22375949-22375968 None:intergenic 30.0%
GTAACTTTACTATTCATCAC+AGG - chr8_1:22375961-22375980 Msa1185320:intron 30.0%
! TTTTCTTTTGCATAGTCAGA+GGG + chr8_1:22376147-22376166 None:intergenic 30.0%
! TTTTTCTTTTGCATAGTCAG+AGG + chr8_1:22376148-22376167 None:intergenic 30.0%
GCAAAAGAAAAATAAGGGTT+AGG - chr8_1:22376156-22376175 Msa1185320:five_prime_UTR 30.0%
TCAAGGAAAAGGATTGGATT+TGG + chr8_1:22365125-22365144 None:intergenic 35.0%
GTAAGTTCAAGGAAAAGGAT+TGG + chr8_1:22365131-22365150 None:intergenic 35.0%
TTGAGGTAAGTTCAAGGAAA+AGG + chr8_1:22365136-22365155 None:intergenic 35.0%
CCATAATTGAGGTAAGTTCA+AGG + chr8_1:22365142-22365161 None:intergenic 35.0%
CCTTGAACTTACCTCAATTA+TGG - chr8_1:22365139-22365158 Msa1185320:three_prime_UTR 35.0%
!! TTATGGATCACTACTTTTGG+GGG - chr8_1:22365156-22365175 Msa1185320:three_prime_UTR 35.0%
CTAGAACAGGAAAATAAGGA+AGG + chr8_1:22365237-22365256 None:intergenic 35.0%
!!! CTTCCTTATTTTCCTGTTCT+AGG - chr8_1:22365235-22365254 Msa1185320:exon 35.0%
GAAACAGATTTGCACCAAAT+TGG + chr8_1:22365296-22365315 None:intergenic 35.0%
!!! GTGTTTAGACCCTTTTTTCT+AGG - chr8_1:22365390-22365409 Msa1185320:intron 35.0%
GGATGAAAGAAACAAGGAAA+TGG + chr8_1:22365478-22365497 None:intergenic 35.0%
!! GAAGGGTGTTTGAAATATGA+AGG + chr8_1:22365499-22365518 None:intergenic 35.0%
TTACCACCCAATAAAACCAA+AGG + chr8_1:22365536-22365555 None:intergenic 35.0%
! TTTCATCCCTTTTCCTTACA+AGG - chr8_1:22365633-22365652 Msa1185320:intron 35.0%
AAAAAAAGTCCTCACCAAGA+AGG + chr8_1:22365675-22365694 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8_1:22365950-22365969 Msa1185320:intron 35.0%
TATTCATCGAGGGTTTCTTT+AGG - chr8_1:22366083-22366102 Msa1185320:intron 35.0%
ATTCATCGAGGGTTTCTTTA+GGG - chr8_1:22366084-22366103 Msa1185320:intron 35.0%
GGTGTGAAGATATGTTAGTA+AGG + chr8_1:22366504-22366523 None:intergenic 35.0%
TGTTAGGACTTTGATTGTCT+TGG + chr8_1:22366985-22367004 None:intergenic 35.0%
TCAACTTAATGTTATGGTGG+AGG + chr8_1:22367192-22367211 None:intergenic 35.0%
AAGTATTCGTTATGTAGTGC+AGG + chr8_1:22367364-22367383 None:intergenic 35.0%
CCCTGCATCATAAATGTTAT+AGG + chr8_1:22367511-22367530 None:intergenic 35.0%
TCACAAACAATAATCTCCCA+AGG - chr8_1:22367629-22367648 Msa1185320:intron 35.0%
! ATTGAATCTAGCCTTTAGAG+TGG + chr8_1:22367925-22367944 None:intergenic 35.0%
! GATGAAGACACATTTTCGTT+GGG + chr8_1:22368176-22368195 None:intergenic 35.0%
! AGATGAAGACACATTTTCGT+TGG + chr8_1:22368177-22368196 None:intergenic 35.0%
! TCTTCATCTATCCGTTTTGT+TGG - chr8_1:22368188-22368207 Msa1185320:intron 35.0%
AGCATCATCTTAAAACATGG+GGG + chr8_1:22368230-22368249 None:intergenic 35.0%
GACAATTTCCTAAGGTAGTT+AGG - chr8_1:22368470-22368489 Msa1185320:intron 35.0%
! ATTTTGTGCCTAACTACCTT+AGG + chr8_1:22368481-22368500 None:intergenic 35.0%
TTGTCTTGAAGAGTAGTTCA+AGG - chr8_1:22368694-22368713 Msa1185320:intron 35.0%
GTCAATTGTCATCTTGTGTT+TGG + chr8_1:22369002-22369021 None:intergenic 35.0%
!!! TCTCTCTATTTTGGCATTTG+GGG + chr8_1:22369046-22369065 None:intergenic 35.0%
!!! CTCTCTCTATTTTGGCATTT+GGG + chr8_1:22369047-22369066 None:intergenic 35.0%
GTGCATTTCTACTCATTTGT+AGG - chr8_1:22369313-22369332 Msa1185320:intron 35.0%
AAAAAGAGAGACCACATTTC+TGG - chr8_1:22369511-22369530 Msa1185320:intron 35.0%
AAAAGAGAGACCACATTTCT+GGG - chr8_1:22369512-22369531 Msa1185320:intron 35.0%
AATGATTCTACCCAGAAATG+TGG + chr8_1:22369525-22369544 None:intergenic 35.0%
! AGATGTAGTTTTTGTCGGAA+GGG + chr8_1:22369582-22369601 None:intergenic 35.0%
! TAGATGTAGTTTTTGTCGGA+AGG + chr8_1:22369583-22369602 None:intergenic 35.0%
CTCGAAAACATAACTAGAAG+GGG + chr8_1:22369681-22369700 None:intergenic 35.0%
CGTGACAATTAATTCTTGGA+AGG + chr8_1:22369713-22369732 None:intergenic 35.0%
GGTCTAAGTAGAACATTTGT+GGG + chr8_1:22370057-22370076 None:intergenic 35.0%
TCTACTTAGACCCATAAACA+AGG - chr8_1:22370065-22370084 Msa1185320:intron 35.0%
CTACTTAGACCCATAAACAA+GGG - chr8_1:22370066-22370085 Msa1185320:intron 35.0%
!!! AAAGTTTTAGGGTTGTTTGG+AGG - chr8_1:22370239-22370258 Msa1185320:intron 35.0%
!! CGTTTAGTCTTTTGTTGCTT+TGG + chr8_1:22370267-22370286 None:intergenic 35.0%
AGACTAAACGATCAAGACAA+TGG - chr8_1:22370277-22370296 Msa1185320:intron 35.0%
TAATGCATTCATGCTTGATG+AGG - chr8_1:22370373-22370392 Msa1185320:intron 35.0%
AATGCATTCATGCTTGATGA+GGG - chr8_1:22370374-22370393 Msa1185320:intron 35.0%
GGATCAAAGTAAAGTGATGT+GGG + chr8_1:22370446-22370465 None:intergenic 35.0%
TGGATCAAAGTAAAGTGATG+TGG + chr8_1:22370447-22370466 None:intergenic 35.0%
AAGACTGGATCCATATGTAA+TGG + chr8_1:22370467-22370486 None:intergenic 35.0%
!! AGTCTAGTTTGACTTGATGA+AGG + chr8_1:22370493-22370512 None:intergenic 35.0%
CTTCTTGTTGGAAAATATGG+AGG - chr8_1:22370519-22370538 Msa1185320:intron 35.0%
GCAATAAGAGACAAATGATC+AGG - chr8_1:22370549-22370568 Msa1185320:intron 35.0%
!! GATGTGATTTTAAGTCCTCT+TGG + chr8_1:22370579-22370598 None:intergenic 35.0%
TGACCTAAAAGCTAAACTCT+TGG - chr8_1:22370747-22370766 Msa1185320:intron 35.0%
!!! TGTCCAAGAGTTTAGCTTTT+AGG + chr8_1:22370753-22370772 None:intergenic 35.0%
ACAACTGGAATTGAAGGAAA+TGG + chr8_1:22370788-22370807 None:intergenic 35.0%
! TTTAGGTTTGCCTGTTTGTT+TGG + chr8_1:22370930-22370949 None:intergenic 35.0%
TGATTGCAGAAGCAAGAAAA+AGG + chr8_1:22370963-22370982 None:intergenic 35.0%
CAAATATTCATATGCAGTCG+AGG - chr8_1:22371001-22371020 Msa1185320:intron 35.0%
CTTGGAGGCTTATTGAATAA+AGG + chr8_1:22371094-22371113 None:intergenic 35.0%
! TTATCTATTGGGAGGTGTAA+GGG + chr8_1:22371117-22371136 None:intergenic 35.0%
! GAGTCTTTGGTGTAAATTTC+TGG + chr8_1:22371233-22371252 None:intergenic 35.0%
GAGGAAGACACAATAATAAG+AGG + chr8_1:22371807-22371826 None:intergenic 35.0%
GCACCTATAAATAGACACAT+AGG - chr8_1:22372058-22372077 Msa1185320:intron 35.0%
GTGCCTATGTGTCTATTTAT+AGG + chr8_1:22372064-22372083 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG + chr8_1:22373060-22373079 None:intergenic 35.0%
TATAAGTAGAATCGAGGTGT+TGG + chr8_1:22373235-22373254 None:intergenic 35.0%
ATTTAGTAATGTGGGACAAG+AGG + chr8_1:22373321-22373340 None:intergenic 35.0%
CCAGAGTAGAGAAAGAATAT+TGG + chr8_1:22373421-22373440 None:intergenic 35.0%
CCAATATTCTTTCTCTACTC+TGG - chr8_1:22373418-22373437 Msa1185320:intron 35.0%
!! CTTTCTCTACTCTGGAATAT+CGG - chr8_1:22373426-22373445 Msa1185320:intron 35.0%
!! TTTCTCTACTCTGGAATATC+GGG - chr8_1:22373427-22373446 Msa1185320:intron 35.0%
CATGGCAATTCATTCTTGAT+AGG - chr8_1:22373474-22373493 Msa1185320:intron 35.0%
!! CTTCGTTATGCACTTTTTGT+GGG - chr8_1:22373549-22373568 Msa1185320:intron 35.0%
!! TTCGTTATGCACTTTTTGTG+GGG - chr8_1:22373550-22373569 Msa1185320:intron 35.0%
!! AATAGGTGACTAACCGATTT+TGG + chr8_1:22373581-22373600 None:intergenic 35.0%
!! TTCTTTGGTGTTGTTGGTTT+AGG - chr8_1:22373924-22373943 Msa1185320:intron 35.0%
!! TTGTTGGTTTAGGTGTTGTT+TGG - chr8_1:22373934-22373953 Msa1185320:intron 35.0%
ACACCTGTGAAATACCAAAA+AGG + chr8_1:22373981-22374000 None:intergenic 35.0%
CTCTGATCAACTCATTTGTT+AGG - chr8_1:22374159-22374178 Msa1185320:intron 35.0%
! ATCAACTCATTTGTTAGGGA+GGG - chr8_1:22374164-22374183 Msa1185320:intron 35.0%
! AATATGAGGGCATGTATTTC+AGG + chr8_1:22374569-22374588 None:intergenic 35.0%
ACCTTCTTGAGACTTCAAAA+CGG - chr8_1:22374741-22374760 Msa1185320:intron 35.0%
AAGCAAAATTCGAGCAAGAA+AGG - chr8_1:22374953-22374972 Msa1185320:intron 35.0%
CCTGAGTCTGAATAATAGAA+AGG + chr8_1:22375040-22375059 None:intergenic 35.0%
CCTTTCTATTATTCAGACTC+AGG - chr8_1:22375037-22375056 Msa1185320:intron 35.0%
! TTATTCAGACTCAGGTTTTC+AGG - chr8_1:22375045-22375064 Msa1185320:intron 35.0%
! TATTCAGACTCAGGTTTTCA+GGG - chr8_1:22375046-22375065 Msa1185320:intron 35.0%
AATTGAGCAGCTAAAGGAAA+AGG - chr8_1:22375073-22375092 Msa1185320:intron 35.0%
GAAAGATGCAATCTCAATTG+TGG + chr8_1:22375268-22375287 None:intergenic 35.0%
! CTTTTTGATGTAATGCTAGC+TGG + chr8_1:22375576-22375595 None:intergenic 35.0%
!! TGGGGTCAGGTTGATTAATA+AGG - chr8_1:22365046-22365065 Msa1185320:three_prime_UTR 40.0%
CAGGAAAATAAGGAAGGGAA+GGG + chr8_1:22365231-22365250 None:intergenic 40.0%
ACAGGAAAATAAGGAAGGGA+AGG + chr8_1:22365232-22365251 None:intergenic 40.0%
GTGCCTAGAACAGGAAAATA+AGG + chr8_1:22365241-22365260 None:intergenic 40.0%
!!! GTTCCTTTGGTTTTATTGGG+TGG - chr8_1:22365530-22365549 Msa1185320:intron 40.0%
! TGTGTTTTTCCTTCTTGGTG+AGG - chr8_1:22365663-22365682 Msa1185320:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8_1:22365846-22365865 Msa1185320:intron 40.0%
AATTCATATAGCCTCCCTCT+TGG + chr8_1:22365968-22365987 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG - chr8_1:22366100-22366119 Msa1185320:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG - chr8_1:22366101-22366120 Msa1185320:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr8_1:22366107-22366126 Msa1185320:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr8_1:22366111-22366130 Msa1185320:intron 40.0%
TTGAGGGTTTATGAGTGGAA+GGG + chr8_1:22366314-22366333 None:intergenic 40.0%
ATTGAGGGTTTATGAGTGGA+AGG + chr8_1:22366315-22366334 None:intergenic 40.0%
TTGGATTGAGGGTTTATGAG+TGG + chr8_1:22366319-22366338 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr8_1:22366330-22366349 None:intergenic 40.0%
! ACAAACTCTAAGGGTGTGTT+TGG + chr8_1:22366338-22366357 None:intergenic 40.0%
! TCTAAAGTGAGTCGTTGTGA+TGG + chr8_1:22366525-22366544 None:intergenic 40.0%
!! AATGTTATGGTGGAGGTACT+AGG + chr8_1:22367185-22367204 None:intergenic 40.0%
CAGTACATCACATGTAGTTG+CGG - chr8_1:22367219-22367238 Msa1185320:intron 40.0%
TCGCAAGATCATACGATCTT+GGG + chr8_1:22367742-22367761 None:intergenic 40.0%
TTACAATCTGATAGCCGACA+CGG - chr8_1:22367823-22367842 Msa1185320:intron 40.0%
AAAAGTTGAGGGTCGAAATC+GGG + chr8_1:22367860-22367879 None:intergenic 40.0%
CAAAAGTTGAGGGTCGAAAT+CGG + chr8_1:22367861-22367880 None:intergenic 40.0%
GTTTCGTGGTCAAAAGTTGA+GGG + chr8_1:22367871-22367890 None:intergenic 40.0%
AGTTTCGTGGTCAAAAGTTG+AGG + chr8_1:22367872-22367891 None:intergenic 40.0%
!! TAGCCTTTAGAGTGGAAAAC+GGG + chr8_1:22367917-22367936 None:intergenic 40.0%
!! CTAGCCTTTAGAGTGGAAAA+CGG + chr8_1:22367918-22367937 None:intergenic 40.0%
ATATGATATGAGAAGGGGAG+AGG + chr8_1:22368079-22368098 None:intergenic 40.0%
ACGAGGAAACACCAACAAAA+CGG + chr8_1:22368202-22368221 None:intergenic 40.0%
GTGGGATCTTGTCTATTATG+TGG - chr8_1:22368369-22368388 Msa1185320:intron 40.0%
TATACCCCAACGATCTTTAG+TGG - chr8_1:22368435-22368454 Msa1185320:intron 40.0%
ATACCCCAACGATCTTTAGT+GGG - chr8_1:22368436-22368455 Msa1185320:intron 40.0%
ACTTGTGGGACTATCAAATG+TGG - chr8_1:22368608-22368627 Msa1185320:intron 40.0%
CAAATGTGGTTTGATGCAAG+TGG - chr8_1:22368622-22368641 Msa1185320:intron 40.0%
TCTAGATCAAGGTTCAAACG+AGG - chr8_1:22368654-22368673 Msa1185320:intron 40.0%
CTTGAAGAGTAGTTCAAGGA+TGG - chr8_1:22368698-22368717 Msa1185320:intron 40.0%
ACATGTATAATCAGGGAGCA+AGG - chr8_1:22368804-22368823 Msa1185320:intron 40.0%
!!! CCTCTCTCTATTTTGGCATT+TGG + chr8_1:22369048-22369067 None:intergenic 40.0%
CCAAATGCCAAAATAGAGAG+AGG - chr8_1:22369045-22369064 Msa1185320:intron 40.0%
! CCTTTCTCCTCTCTCTATTT+TGG + chr8_1:22369055-22369074 None:intergenic 40.0%
CCAAAATAGAGAGAGGAGAA+AGG - chr8_1:22369052-22369071 Msa1185320:intron 40.0%
TTTGTAGCACGCCAAATAAG+AGG - chr8_1:22369440-22369459 Msa1185320:intron 40.0%
! TAGTTTTTGTCGGAAGGGTT+TGG + chr8_1:22369577-22369596 None:intergenic 40.0%
AATGGTCATCTACCTCAAGT+TGG - chr8_1:22369610-22369629 Msa1185320:CDS 40.0%
!! AACTAGAAGGGGAGTGTTAA+CGG + chr8_1:22369670-22369689 None:intergenic 40.0%
GGGTCTAAGTAGAACATTTG+TGG + chr8_1:22370058-22370077 None:intergenic 40.0%
GATCAAGACAATGGAGAGAT+TGG - chr8_1:22370286-22370305 Msa1185320:intron 40.0%
ACTTGATGAAGGAGAAAGAC+TGG + chr8_1:22370482-22370501 None:intergenic 40.0%
AAATGATCAGGAACACCAAG+AGG - chr8_1:22370561-22370580 Msa1185320:intron 40.0%
!! TCAATGTCCTAAGGTTTTGG+CGG + chr8_1:22370603-22370622 None:intergenic 40.0%
TGCAGAAGCAAGAAAAAGGT+TGG + chr8_1:22370959-22370978 None:intergenic 40.0%
ACCCTTCCAAAATGACACTA+AGG - chr8_1:22371060-22371079 Msa1185320:intron 40.0%
!!! CCCTTAGTGTCATTTTGGAA+GGG + chr8_1:22371064-22371083 None:intergenic 40.0%
CCCTTCCAAAATGACACTAA+GGG - chr8_1:22371061-22371080 Msa1185320:intron 40.0%
!!! ATGTGCCCTTAGTGTCATTT+TGG + chr8_1:22371069-22371088 None:intergenic 40.0%
! CTTATCTATTGGGAGGTGTA+AGG + chr8_1:22371118-22371137 None:intergenic 40.0%
CTTACACCTCCCAATAGATA+AGG - chr8_1:22371116-22371135 Msa1185320:intron 40.0%
AATGTGCCTTATCTATTGGG+AGG + chr8_1:22371125-22371144 None:intergenic 40.0%
! TGTTGGAGTGCTATTAATCC+TGG + chr8_1:22371743-22371762 None:intergenic 40.0%
! TCAACTGATTCAGATGGTGT+TGG + chr8_1:22371760-22371779 None:intergenic 40.0%
! ATAGACACATAGGCACTGTT+TGG - chr8_1:22372068-22372087 Msa1185320:intron 40.0%
CTATAAGCTCGAATGCTACT+CGG + chr8_1:22372228-22372247 None:intergenic 40.0%
AGCTGATAGCTTATAGCTGA+TGG + chr8_1:22373023-22373042 None:intergenic 40.0%
AAAGGTCCTATGTTCGAATC+CGG + chr8_1:22373176-22373195 None:intergenic 40.0%
! GCTCAATCGGTTTAAGCTTA+AGG + chr8_1:22373209-22373228 None:intergenic 40.0%
GAGAAAACTTGAACCTTGGA+TGG + chr8_1:22373455-22373474 None:intergenic 40.0%
CCATGAGAAAACTTGAACCT+TGG + chr8_1:22373459-22373478 None:intergenic 40.0%
!! CCAAGGTTCAAGTTTTCTCA+TGG - chr8_1:22373456-22373475 Msa1185320:intron 40.0%
!! AGTGTCGGGTTTTGATCAAT+CGG - chr8_1:22373522-22373541 Msa1185320:intron 40.0%
!! GCTTCGTTATGCACTTTTTG+TGG - chr8_1:22373548-22373567 Msa1185320:intron 40.0%
! AGTCACCTATTTGTTACCTG+TGG - chr8_1:22373590-22373609 Msa1185320:intron 40.0%
! GTCACCTATTTGTTACCTGT+GGG - chr8_1:22373591-22373610 Msa1185320:intron 40.0%
! TCACCTATTTGTTACCTGTG+GGG - chr8_1:22373592-22373611 Msa1185320:intron 40.0%
! GCTCTTGTTTCCATTATGAC+TGG - chr8_1:22373704-22373723 Msa1185320:intron 40.0%
TTGTTTCCATTATGACTGGC+AGG - chr8_1:22373708-22373727 Msa1185320:intron 40.0%
TCTTGGGTCAGTATCTTTGA+TGG - chr8_1:22373801-22373820 Msa1185320:intron 40.0%
! GGTCAGTATCTTTGATGGTT+GGG - chr8_1:22373806-22373825 Msa1185320:intron 40.0%
ACAAAGAGCTCAGACACAAT+GGG + chr8_1:22373865-22373884 None:intergenic 40.0%
AACAAAGAGCTCAGACACAA+TGG + chr8_1:22373866-22373885 None:intergenic 40.0%
ATTGTGTCTGAGCTCTTTGT+TGG - chr8_1:22373865-22373884 Msa1185320:intron 40.0%
!! GGTTTCTTCTTTGGTGTTGT+TGG - chr8_1:22373918-22373937 Msa1185320:intron 40.0%
! CTGCACATTTATCGCCTTTT+TGG - chr8_1:22373964-22373983 Msa1185320:intron 40.0%
!! TCGCCTTTTTGGTATTTCAC+AGG - chr8_1:22373975-22373994 Msa1185320:intron 40.0%
TTGGTATTTCACAGGTGTGT+AGG - chr8_1:22373983-22374002 Msa1185320:intron 40.0%
TGGTATTTCACAGGTGTGTA+GGG - chr8_1:22373984-22374003 Msa1185320:intron 40.0%
! GATCAACTCATTTGTTAGGG+AGG - chr8_1:22374163-22374182 Msa1185320:intron 40.0%
GCATCATACTGCACTTGTAT+AGG + chr8_1:22374197-22374216 None:intergenic 40.0%
ACTGCAGAAACTTCCCAATT+TGG - chr8_1:22374221-22374240 Msa1185320:intron 40.0%
ACACCATACTGCAATTGTAG+AGG - chr8_1:22374278-22374297 Msa1185320:intron 40.0%
GATCCTCTACAATTGCAGTA+TGG + chr8_1:22374284-22374303 None:intergenic 40.0%
!!! ACCGTTTTGAAGTCTCAAGA+AGG + chr8_1:22374745-22374764 None:intergenic 40.0%
TTCTCCTAAGAGTTTCCTGA+GGG + chr8_1:22374871-22374890 None:intergenic 40.0%
AAACTCTTAGGAGAAGGTCT+AGG - chr8_1:22374876-22374895 Msa1185320:intron 40.0%
AACTCTTAGGAGAAGGTCTA+GGG - chr8_1:22374877-22374896 Msa1185320:intron 40.0%
GGAACAAATTGAGCAGCTAA+AGG - chr8_1:22375067-22375086 Msa1185320:intron 40.0%
AAAGGTTCGAAACTGCAATC+TGG + chr8_1:22375322-22375341 None:intergenic 40.0%
! CATGGCATTTTCAGCAACTA+GGG + chr8_1:22375636-22375655 None:intergenic 40.0%
ATTTACCTTCTCTGTGAGCA+TGG + chr8_1:22375654-22375673 None:intergenic 40.0%
CACAGGAAGCAACAAATGAT+CGG - chr8_1:22375978-22375997 Msa1185320:intron 40.0%
AAGTAGTCCAAGTTCAGATG+TGG - chr8_1:22376039-22376058 Msa1185320:five_prime_UTR 40.0%
GTGGAGACTGAATTGTTCAT+TGG - chr8_1:22376058-22376077 Msa1185320:five_prime_UTR 40.0%
! ATGCGTCTTGTTCTTGTTTC+TGG + chr8_1:22376088-22376107 None:intergenic 40.0%
AACAAGACGCATTTCTCCAA+AGG - chr8_1:22376096-22376115 Msa1185320:five_prime_UTR 40.0%
GCATAGTCAGAGGGATTAAT+CGG + chr8_1:22376138-22376157 None:intergenic 40.0%
GGTAGCTGTAGAAGCAAGAT+GGG - chr8_1:22365027-22365046 Msa1185320:three_prime_UTR 45.0%
GTAGCTGTAGAAGCAAGATG+GGG - chr8_1:22365028-22365047 Msa1185320:three_prime_UTR 45.0%
TAAAGGGTTGTGCCTAGAAC+AGG + chr8_1:22365250-22365269 None:intergenic 45.0%
ATCAGTGTTGTGTGATGCTG+AGG - chr8_1:22365922-22365941 Msa1185320:intron 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8_1:22365954-22365973 Msa1185320:intron 45.0%
!! GGGTTTCTTTAGGGTGTGTT+TGG - chr8_1:22366093-22366112 Msa1185320:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr8_1:22366110-22366129 Msa1185320:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr8_1:22366112-22366131 Msa1185320:intron 45.0%
! CTAAGGGTGTGTTTGGATTG+AGG + chr8_1:22366331-22366350 None:intergenic 45.0%
TGCAATAGAGGTCCCAATCA+TGG - chr8_1:22367694-22367713 Msa1185320:intron 45.0%
CGATCCTGACAACCATGATT+GGG + chr8_1:22367709-22367728 None:intergenic 45.0%
CTCGCAAGATCATACGATCT+TGG + chr8_1:22367743-22367762 None:intergenic 45.0%
GTCGGCTATCAGATTGTAAC+CGG + chr8_1:22367822-22367841 None:intergenic 45.0%
GATCCCACTAAAGATCGTTG+GGG + chr8_1:22368442-22368461 None:intergenic 45.0%
GGATCCCACTAAAGATCGTT+GGG + chr8_1:22368443-22368462 None:intergenic 45.0%
AGGATCCCACTAAAGATCGT+TGG + chr8_1:22368444-22368463 None:intergenic 45.0%
ATGTGGTTTGATGCAAGTGG+AGG - chr8_1:22368625-22368644 Msa1185320:intron 45.0%
ATCAAGGTTCAAACGAGGCT+TGG - chr8_1:22368659-22368678 Msa1185320:intron 45.0%
!! GTTTTGTTCGGACCAACTTG+AGG + chr8_1:22369625-22369644 None:intergenic 45.0%
GTTGGAAAATATGGAGGAGC+AGG - chr8_1:22370525-22370544 Msa1185320:intron 45.0%
! GATGATTTCGCGCCTCTTTT+TGG + chr8_1:22370706-22370725 None:intergenic 45.0%
! AGAGGCGCGAAATCATCTTT+CGG - chr8_1:22370709-22370728 Msa1185320:intron 45.0%
! TGTTTGGAGGAGGAAGCTTT+TGG + chr8_1:22370914-22370933 None:intergenic 45.0%
TTTGCCTGTTTGTTTGGAGG+AGG + chr8_1:22370924-22370943 None:intergenic 45.0%
AGGTTTGCCTGTTTGTTTGG+AGG + chr8_1:22370927-22370946 None:intergenic 45.0%
!!! GCCCTTAGTGTCATTTTGGA+AGG + chr8_1:22371065-22371084 None:intergenic 45.0%
TTGTGAGTCTGGTAGGAAAG+TGG + chr8_1:22371282-22371301 None:intergenic 45.0%
! TCAAGCATTGTGAGTCTGGT+AGG + chr8_1:22371289-22371308 None:intergenic 45.0%
! TCTGTCAAGCATTGTGAGTC+TGG + chr8_1:22371293-22371312 None:intergenic 45.0%
CGGTATCGTTCAATCGTTTC+TGG + chr8_1:22371712-22371731 None:intergenic 45.0%
AACGATACCGCAATCATACC+AGG - chr8_1:22371722-22371741 Msa1185320:intron 45.0%
GCTAGAACATGTTCCCTAGA+AGG + chr8_1:22372040-22372059 None:intergenic 45.0%
ATTCGTCCGGATTCGAACAT+AGG - chr8_1:22373167-22373186 Msa1185320:intron 45.0%
!! GAGGTGTTGGTTAGCTCAAT+CGG + chr8_1:22373222-22373241 None:intergenic 45.0%
!! GTGTCGGGTTTTGATCAATC+GGG - chr8_1:22373523-22373542 Msa1185320:intron 45.0%
!! GTTATGCACTTTTTGTGGGG+AGG - chr8_1:22373553-22373572 Msa1185320:intron 45.0%
GCAAAAATCCAGTTCACCTC+TGG - chr8_1:22373653-22373672 Msa1185320:intron 45.0%
CTCAAAAACCCAGTATCCAG+AGG + chr8_1:22373672-22373691 None:intergenic 45.0%
!! CTGGATACTGGGTTTTTGAG+AGG - chr8_1:22373672-22373691 Msa1185320:intron 45.0%
TTTCCATTATGACTGGCAGG+TGG - chr8_1:22373711-22373730 Msa1185320:intron 45.0%
ACCGGTAGGTTCTTGAGTAA+GGG - chr8_1:22373752-22373771 Msa1185320:intron 45.0%
ACCCTTACTCAAGAACCTAC+CGG + chr8_1:22373756-22373775 None:intergenic 45.0%
CTTGAGTAAGGGTCTTGCAT+CGG - chr8_1:22373763-22373782 Msa1185320:intron 45.0%
! CTTGCATCGGTGCATTTAAG+CGG - chr8_1:22373776-22373795 Msa1185320:intron 45.0%
! TTGCATCGGTGCATTTAAGC+GGG - chr8_1:22373777-22373796 Msa1185320:intron 45.0%
! GGGTCAGTATCTTTGATGGT+TGG - chr8_1:22373805-22373824 Msa1185320:intron 45.0%
GGTATTTCACAGGTGTGTAG+GGG - chr8_1:22373985-22374004 Msa1185320:intron 45.0%
ATGCAAAAGACCTGTGGAAG+TGG - chr8_1:22374131-22374150 Msa1185320:intron 45.0%
CATTCCCTCAGGAAACTCTT+AGG - chr8_1:22374864-22374883 Msa1185320:intron 45.0%
CTTCTCCTAAGAGTTTCCTG+AGG + chr8_1:22374872-22374891 None:intergenic 45.0%
CTCAGGAAACTCTTAGGAGA+AGG - chr8_1:22374870-22374889 Msa1185320:intron 45.0%
GCAATCTGGTCGCAACATAA+TGG + chr8_1:22375308-22375327 None:intergenic 45.0%
! GCATGGCATTTTCAGCAACT+AGG + chr8_1:22375637-22375656 None:intergenic 45.0%
AAATGCCATGCTCACAGAGA+AGG - chr8_1:22375646-22375665 Msa1185320:intron 45.0%
GGACTACTTTGATCTGCAGA+AGG + chr8_1:22376028-22376047 None:intergenic 45.0%
TCAGTCTCCACATCTGAACT+TGG + chr8_1:22376049-22376068 None:intergenic 45.0%
! TCCAAAGGTGTAGCTAGTTG+AGG - chr8_1:22376111-22376130 Msa1185320:five_prime_UTR 45.0%
TCCTCAACTAGCTACACCTT+TGG + chr8_1:22376115-22376134 None:intergenic 45.0%
TGCATTGTATATGACCCGTG+CGG + chr8_1:22376314-22376333 None:intergenic 45.0%
!! AAATTAATAATTCATATATA+AGG + chr8_1:22367326-22367345 None:intergenic 5.0%
!! GATTATTATTAAAAAAATTT+AGG + chr8_1:22369228-22369247 None:intergenic 5.0%
!! AAATAAATAAATAAAAAAGA+AGG + chr8_1:22369898-22369917 None:intergenic 5.0%
!!! AATTTTTTTTTTTTTTTTTG+TGG + chr8_1:22371153-22371172 None:intergenic 5.0%
!! AATTAATATATATAAGTAAA+AGG + chr8_1:22374067-22374086 None:intergenic 5.0%
!!! TTTTTTTTTTTGTAAAAAAA+AGG - chr8_1:22374464-22374483 Msa1185320:intron 5.0%
!!! CTATATAATTTTAAATTTTA+CGG - chr8_1:22374998-22375017 Msa1185320:intron 5.0%
GGGTAGCTGTAGAAGCAAGA+TGG - chr8_1:22365026-22365045 Msa1185320:three_prime_UTR 50.0%
TGTAGAAGCAAGATGGGGTC+AGG - chr8_1:22365033-22365052 Msa1185320:three_prime_UTR 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr8_1:22366116-22366135 Msa1185320:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr8_1:22366117-22366136 Msa1185320:intron 50.0%
GGTTTATGAGTGGAAGGGAG+GGG + chr8_1:22366309-22366328 None:intergenic 50.0%
GGGTTTATGAGTGGAAGGGA+GGG + chr8_1:22366310-22366329 None:intergenic 50.0%
AGGGTTTATGAGTGGAAGGG+AGG + chr8_1:22366311-22366330 None:intergenic 50.0%
AGGTCCCAATCATGGTTGTC+AGG - chr8_1:22367702-22367721 Msa1185320:intron 50.0%
GCGATCCTGACAACCATGAT+TGG + chr8_1:22367710-22367729 None:intergenic 50.0%
! TCATGATGCCTCCACCGATT+TGG - chr8_1:22367763-22367782 Msa1185320:intron 50.0%
ATCTCGGACCAGCTCCAAAT+CGG + chr8_1:22367780-22367799 None:intergenic 50.0%
! ATTTGGAGCTGGTCCGAGAT+CGG - chr8_1:22367780-22367799 Msa1185320:intron 50.0%
AGATTGTAACCGGCCAAACC+GGG + chr8_1:22367812-22367831 None:intergenic 50.0%
CAGATTGTAACCGGCCAAAC+CGG + chr8_1:22367813-22367832 None:intergenic 50.0%
! TCTGATAGCCGACACGGTTT+TGG - chr8_1:22367829-22367848 Msa1185320:intron 50.0%
! GGCAGAATGAGCTAGTTTCG+TGG + chr8_1:22367885-22367904 None:intergenic 50.0%
! GTGGAAAACGGGTCGATTTC+TGG + chr8_1:22367906-22367925 None:intergenic 50.0%
! CGACCCGTTTTCCACTCTAA+AGG - chr8_1:22367911-22367930 Msa1185320:intron 50.0%
AGAAGGGGAGAGGATGTGAT+AGG + chr8_1:22368069-22368088 None:intergenic 50.0%
!! AGATGGGAAAAGGCATTGCG+AGG - chr8_1:22368510-22368529 Msa1185320:intron 50.0%
!! GATGGGAAAAGGCATTGCGA+GGG - chr8_1:22368511-22368530 Msa1185320:intron 50.0%
GGAGGTCGATGTCTAGATCA+AGG - chr8_1:22368643-22368662 Msa1185320:intron 50.0%
GTTCAAGGATGGAGAGAGCA+AGG - chr8_1:22368709-22368728 Msa1185320:intron 50.0%
TGGAGAGAGCAAGGTTCAAG+TGG - chr8_1:22368718-22368737 Msa1185320:intron 50.0%
ATCAGGGAGCAAGGTTCAAG+TGG - chr8_1:22368813-22368832 Msa1185320:intron 50.0%
!! AGAAGGGGAGTGTTAACGGA+TGG + chr8_1:22369666-22369685 None:intergenic 50.0%
CACATCTCCGCCAAAACCTT+AGG - chr8_1:22370593-22370612 Msa1185320:intron 50.0%
GCTTCCTCCTCCAAACAAAC+AGG - chr8_1:22370917-22370936 Msa1185320:intron 50.0%
! TATTGGGAGGTGTAAGGGCT+TGG + chr8_1:22371112-22371131 None:intergenic 50.0%
GGAATATCGGGATCCATCCA+AGG - chr8_1:22373439-22373458 Msa1185320:intron 50.0%
GAAGCAGGTTCACTCTAGTC+AGG + chr8_1:22373502-22373521 None:intergenic 50.0%
GAGTGAACCTGCTTCAGTGT+CGG - chr8_1:22373507-22373526 Msa1185320:intron 50.0%
AGTGAACCTGCTTCAGTGTC+GGG - chr8_1:22373508-22373527 Msa1185320:intron 50.0%
TCAAAACCCGACACTGAAGC+AGG + chr8_1:22373517-22373536 None:intergenic 50.0%
TTGTGGGGAGGAGCCAAAAT+CGG - chr8_1:22373565-22373584 Msa1185320:intron 50.0%
CGACCCCACAGGTAACAAAT+AGG + chr8_1:22373598-22373617 None:intergenic 50.0%
TCCAGTTCACCTCTGGATAC+TGG - chr8_1:22373660-22373679 Msa1185320:intron 50.0%
CCAGTTCACCTCTGGATACT+GGG - chr8_1:22373661-22373680 Msa1185320:intron 50.0%
!! CTGGGTTTTTGAGAGGACTC+TGG - chr8_1:22373679-22373698 Msa1185320:intron 50.0%
GTTCCACCTGCCAGTCATAA+TGG + chr8_1:22373717-22373736 None:intergenic 50.0%
GACCGGTAGGTTCTTGAGTA+AGG - chr8_1:22373751-22373770 Msa1185320:intron 50.0%
! TGCATCGGTGCATTTAAGCG+GGG - chr8_1:22373778-22373797 Msa1185320:intron 50.0%
GTGCATTTAAGCGGGGTCTT+GGG - chr8_1:22373785-22373804 Msa1185320:intron 50.0%
AGCTTACTACCCCAAGAGTG+TGG + chr8_1:22373832-22373851 None:intergenic 50.0%
CACTCTTGGGGTAGTAAGCT+TGG - chr8_1:22373832-22373851 Msa1185320:intron 50.0%
TGTCTGAGCTCTTTGTTGGC+AGG - chr8_1:22373869-22373888 Msa1185320:intron 50.0%
CTCTTTGTTGGCAGGTTTCC+AGG - chr8_1:22373877-22373896 Msa1185320:intron 50.0%
!! TTCCAGGCTAGCCTTAGTGT+TGG - chr8_1:22373893-22373912 Msa1185320:intron 50.0%
!! TCCAGGCTAGCCTTAGTGTT+GGG - chr8_1:22373894-22373913 Msa1185320:intron 50.0%
GAAGAAACCGCCCAACACTA+AGG + chr8_1:22373907-22373926 None:intergenic 50.0%
GTGTTGGGCGGTTTCTTCTT+TGG - chr8_1:22373909-22373928 Msa1185320:intron 50.0%
TATGAGTGGAAGGGAGGGGA+GGG + chr8_1:22366305-22366324 None:intergenic 55.0%
TTATGAGTGGAAGGGAGGGG+AGG + chr8_1:22366306-22366325 None:intergenic 55.0%
AACCGGGTCTTCTCCGATCT+CGG + chr8_1:22367796-22367815 None:intergenic 55.0%
AGATCGGAGAAGACCCGGTT+TGG - chr8_1:22367796-22367815 Msa1185320:intron 55.0%
! AAAACATGGGGGTGCAGACG+AGG + chr8_1:22368219-22368238 None:intergenic 55.0%
CCCAGTATCCAGAGGTGAAC+TGG + chr8_1:22373664-22373683 None:intergenic 55.0%
AGGTGGAACCGATCCTCTGT+TGG - chr8_1:22373728-22373747 Msa1185320:intron 55.0%
GGTGGAACCGATCCTCTGTT+GGG - chr8_1:22373729-22373748 Msa1185320:intron 55.0%
AACCGATCCTCTGTTGGGAC+CGG - chr8_1:22373734-22373753 Msa1185320:intron 55.0%
TACCGGTCCCAACAGAGGAT+CGG + chr8_1:22373739-22373758 None:intergenic 55.0%
GGTGCATTTAAGCGGGGTCT+TGG - chr8_1:22373784-22373803 Msa1185320:intron 55.0%
TGATGGTTGGGCCACACTCT+TGG - chr8_1:22373818-22373837 Msa1185320:intron 55.0%
GATGGTTGGGCCACACTCTT+GGG - chr8_1:22373819-22373838 Msa1185320:intron 55.0%
ATGGTTGGGCCACACTCTTG+GGG - chr8_1:22373820-22373839 Msa1185320:intron 55.0%
!! AGGCTAGCCTTAGTGTTGGG+CGG - chr8_1:22373897-22373916 Msa1185320:intron 55.0%
CAGAGAGCTTCCACTTCCAC+AGG + chr8_1:22374144-22374163 None:intergenic 55.0%
ATATGACCCGTGCGGTAGCA+CGG + chr8_1:22376306-22376325 None:intergenic 55.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr8_1:22366120-22366139 Msa1185320:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr8_1:22366121-22366140 Msa1185320:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr8_1:22366122-22366141 Msa1185320:intron 60.0%
!! TGCCTCCACCGATTTGGAGC+TGG - chr8_1:22367769-22367788 Msa1185320:intron 60.0%
GACCAGCTCCAAATCGGTGG+AGG + chr8_1:22367774-22367793 None:intergenic 60.0%
TCGGACCAGCTCCAAATCGG+TGG + chr8_1:22367777-22367796 None:intergenic 60.0%
GTCCGAGATCGGAGAAGACC+CGG - chr8_1:22367791-22367810 Msa1185320:intron 60.0%
GGGTCGAGCCAAAACCGTGT+CGG + chr8_1:22367840-22367859 None:intergenic 60.0%
! TGGGAGGTGTAAGGGCTTGG+AGG + chr8_1:22371109-22371128 None:intergenic 60.0%
CCTGTTAGAAGCGACCCCAC+AGG + chr8_1:22373609-22373628 None:intergenic 60.0%
CCTGTGGGGTCGCTTCTAAC+AGG - chr8_1:22373606-22373625 Msa1185320:intron 60.0%
GATCCTCTGTTGGGACCGGT+AGG - chr8_1:22373738-22373757 Msa1185320:intron 60.0%
GAACCTACCGGTCCCAACAG+AGG + chr8_1:22373744-22373763 None:intergenic 60.0%
! GCCCAACACTAAGGCTAGCC+TGG + chr8_1:22373898-22373917 None:intergenic 60.0%
TTTCCACCCGTGCTACCGCA+CGG - chr8_1:22376296-22376315 Msa1185320:five_prime_UTR 60.0%
TATGACCCGTGCGGTAGCAC+GGG + chr8_1:22376305-22376324 None:intergenic 60.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr8_1:22366125-22366144 Msa1185320:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr8_1:22366126-22366145 Msa1185320:intron 65.0%
!! CGGAGAAGACCCGGTTTGGC+CGG - chr8_1:22367800-22367819 Msa1185320:intron 65.0%
TTCCACCCGTGCTACCGCAC+GGG - chr8_1:22376297-22376316 Msa1185320:five_prime_UTR 65.0%
GACCCGTGCGGTAGCACGGG+TGG + chr8_1:22376302-22376321 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22364953 22376414 22364953 ID=Msa1185320;Name=Msa1185320
chr8_1 mRNA 22364953 22376414 22364953 ID=Msa1185320-mRNA-1;Parent=Msa1185320;Name=Msa1185320-mRNA-1;_AED=0.14;_eAED=0.14;_QI=409|1|1|1|0.85|0.75|8|291|217
chr8_1 exon 22364953 22365384 22364953 ID=Msa1185320-mRNA-1:exon:8256;Parent=Msa1185320-mRNA-1
chr8_1 exon 22365700 22365741 22365700 ID=Msa1185320-mRNA-1:exon:8255;Parent=Msa1185320-mRNA-1
chr8_1 exon 22366273 22366314 22366273 ID=Msa1185320-mRNA-1:exon:8254;Parent=Msa1185320-mRNA-1
chr8_1 exon 22366393 22366492 22366393 ID=Msa1185320-mRNA-1:exon:8253;Parent=Msa1185320-mRNA-1
chr8_1 exon 22366605 22366666 22366605 ID=Msa1185320-mRNA-1:exon:8252;Parent=Msa1185320-mRNA-1
chr8_1 exon 22369578 22369662 22369578 ID=Msa1185320-mRNA-1:exon:8251;Parent=Msa1185320-mRNA-1
chr8_1 exon 22375368 22375566 22375368 ID=Msa1185320-mRNA-1:exon:8250;Parent=Msa1185320-mRNA-1
chr8_1 exon 22376023 22376414 22376023 ID=Msa1185320-mRNA-1:exon:8249;Parent=Msa1185320-mRNA-1
chr8_1 five_prime_UTR 22376023 22376414 22376023 ID=Msa1185320-mRNA-1:five_prime_utr;Parent=Msa1185320-mRNA-1
chr8_1 five_prime_UTR 22375550 22375566 22375550 ID=Msa1185320-mRNA-1:five_prime_utr;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22375368 22375549 22375368 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22369578 22369662 22369578 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22366605 22366666 22366605 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22366393 22366492 22366393 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22366273 22366314 22366273 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22365700 22365741 22365700 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 CDS 22365244 22365384 22365244 ID=Msa1185320-mRNA-1:cds;Parent=Msa1185320-mRNA-1
chr8_1 three_prime_UTR 22364953 22365243 22364953 ID=Msa1185320-mRNA-1:three_prime_utr;Parent=Msa1185320-mRNA-1
Gene Sequence

>Msa1185320

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGAAGAAATGGTTTGTTGAAGAAAGCCTTTGAATTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTATATGAATTTGCTAGCTCTAGCATTCCAGAAACGATTGAACGATACCGCAATCATACCAGGATTAATAGCACTCCAACACCATCTGAATCAGTTGAAAATACTCAGCAATTGAAGGAAGAAGCAGAAAACATGATGAAAAAGATTGACCTTCTTGAGACTTCAAAACGGAAACTCTTAGGAGAAGGTCTAGGGTCTTGTTCCATTGATGAACTACAAAAGATTGAACAACAGTTAGAGAGAAGTATAAGCAAAATTCGAGCAAGAAAGACTCAGGTTTTCAGGGAACAAATTGAGCAGCTAAAGGAAAAGGAAAAAACCCTAGTTGCTGAAAATGCCATGCTCACAGAGAAGGAAGCAACAAATGATCGGAGAGAGAATATAGCTGAAGCTGAACCTTCTGCAGATCAAAGTAGTCCAAGTTCAGATGTGGAGACTGAATTGTTCATTGGTCTTCCAGAAACAAGAACAAGACGCATTTCTCCAAAGGTGTAG
Protein sequence

>Msa1185320

MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSSIPETIERYRNHTRINSTPTPSESVENTQQLKEEAENMMKKIDLLETSKRKLLGEGLGSCSIDELQKIEQQLERSISKIRARKTQVFREQIEQLKEKEKTLVAENAMLTEKEATNDRRENIAEAEPSADQSSPSSDVETELFIGLPETRTRRISPKV*