AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332170 MtrunA17_Chr4g0061691 98.601 143 2 0 1 143 1 143 7.41e-102 291
Msa1332170 MtrunA17_Chr8g0366231 74.126 143 37 0 1 143 1 143 1.11e-74 222
Msa1332170 MtrunA17_Chr5g0420081 69.930 143 43 0 1 143 1 143 1.81e-70 211
Msa1332170 MtrunA17_Chr7g0220121 68.531 143 43 1 1 143 1 141 1.13e-63 195
Msa1332170 MtrunA17_Chr6g0455511 64.336 143 50 1 1 143 1 142 4.66e-57 178
Msa1332170 MtrunA17_Chr3g0122251 61.074 149 49 2 1 143 1 146 5.05e-54 170
Msa1332170 MtrunA17_Chr4g0061671 57.639 144 57 2 1 143 1 141 5.35e-54 168
Msa1332170 MtrunA17_Chr7g0220111 62.937 143 52 1 1 143 1 142 1.14e-53 169
Msa1332170 MtrunA17_Chr8g0351051 61.538 143 54 1 1 143 1 142 4.61e-53 167
Msa1332170 MtrunA17_Chr5g0420091 55.944 143 63 0 1 143 1 143 1.25e-52 166
Msa1332170 MtrunA17_Chr6g0474371 60.993 141 54 1 1 140 1 141 8.82e-52 162
Msa1332170 MtrunA17_Chr2g0279821 51.049 143 68 2 1 143 1 141 3.32e-45 147
Msa1332170 MtrunA17_Chr7g0246431 51.748 143 68 1 1 143 1 142 3.20e-43 141
Msa1332170 MtrunA17_Chr1g0204111 52.349 149 53 4 1 140 17 156 3.67e-43 142
Msa1332170 MtrunA17_Chr2g0308271 71.910 89 25 0 55 143 26 114 1.53e-40 134
Msa1332170 MtrunA17_Chr5g0411691 47.222 144 73 2 1 144 1 141 1.23e-39 133
Msa1332170 MtrunA17_Chr3g0077501 46.154 143 76 1 1 143 1 142 1.55e-38 130
Msa1332170 MtrunA17_Chr3g0097101 45.455 143 77 1 1 143 16 157 1.57e-38 130
Msa1332170 MtrunA17_Chr4g0049541 47.260 146 69 3 1 143 1 141 2.08e-38 129
Msa1332170 MtrunA17_Chr8g0380021 46.154 143 76 1 1 143 17 158 2.64e-38 130
Msa1332170 MtrunA17_Chr2g0284911 45.455 143 77 1 1 143 16 157 4.78e-38 129
Msa1332170 MtrunA17_Chr8g0351041 45.833 144 76 2 1 143 1 143 5.22e-38 127
Msa1332170 MtrunA17_Chr8g0351031 45.833 144 76 2 1 143 1 143 9.39e-38 128
Msa1332170 MtrunA17_Chr2g0308251 73.494 83 21 1 1 83 1 82 2.71e-37 122
Msa1332170 MtrunA17_Chr4g0057151 49.324 148 64 4 1 143 1 142 6.84e-37 125
Msa1332170 MtrunA17_Chr3g0125241 45.139 144 73 2 1 143 26 164 2.86e-34 118
Msa1332170 MtrunA17_Chr4g0020221 48.980 147 70 3 1 144 1 145 1.17e-33 118
Msa1332170 MtrunA17_Chr5g0412461 49.296 142 65 4 1 139 1 138 2.98e-33 116
Msa1332170 MtrunA17_Chr5g0412271 48.592 142 66 4 1 139 1 138 3.33e-33 116
Msa1332170 MtrunA17_Chr4g0018421 41.497 147 79 2 1 143 1 144 3.38e-32 113
Msa1332170 MtrunA17_Chr1g0164791 42.568 148 79 4 1 143 1 147 4.96e-31 110
Msa1332170 MtrunA17_Chr5g0427401 43.972 141 72 3 1 139 1 136 8.19e-31 110
Msa1332170 MtrunA17_Chr1g0159661 44.444 144 74 3 1 143 1 139 1.09e-30 108
Msa1332170 MtrunA17_Chr3g0142191 44.444 144 74 2 1 143 1 139 9.87e-30 107
Msa1332170 MtrunA17_Chr7g0246381 80.000 60 12 0 1 60 1 60 1.88e-29 102
Msa1332170 MtrunA17_Chr8g0377561 81.034 58 11 0 1 58 1 58 1.32e-28 100
Msa1332170 MtrunA17_Chr5g0404951 41.290 155 67 5 1 143 1 143 1.18e-27 102
Msa1332170 MtrunA17_Chr4g0049901 45.070 142 73 3 1 139 27 166 2.13e-27 102
Msa1332170 MtrunA17_Chr1g0173161 63.768 69 25 0 1 69 1 69 1.48e-25 92.8
Msa1332170 MtrunA17_Chr5g0427921 59.322 59 24 0 1 59 1 59 3.17e-23 86.3
Msa1332170 MtrunA17_Chr3g0134451 61.429 70 27 0 1 70 1 70 3.50e-23 92.4
Msa1332170 MtrunA17_Chr4g0044071 60.345 58 23 0 1 58 1 58 1.36e-20 80.9
Msa1332170 MtrunA17_Chr5g0425191 62.069 58 22 0 1 58 1 58 6.14e-20 79.0
Msa1332170 MtrunA17_Chr1g0208561 49.275 69 34 1 2 70 9 76 1.12e-19 81.6
Msa1332170 MtrunA17_Chr2g0325971 49.275 69 34 1 2 70 9 76 1.13e-19 81.6
Msa1332170 MtrunA17_Chr3g0089141 49.275 69 34 1 2 70 9 76 1.18e-19 81.3
Msa1332170 MtrunA17_Chr2g0292791 50.725 69 33 1 2 70 9 76 2.76e-19 80.5
Msa1332170 MtrunA17_Chr3g0099421 44.444 90 47 1 2 88 34 123 4.69e-19 80.5
Msa1332170 MtrunA17_Chr1g0166611 75.000 44 11 0 16 59 20 63 1.16e-18 76.6
Msa1332170 MtrunA17_Chr3g0099411 49.275 69 34 1 2 70 9 76 1.19e-18 78.6
Msa1332170 MtrunA17_Chr8g0355091 49.275 69 34 1 2 70 9 76 2.20e-18 78.2
Msa1332170 MtrunA17_Chr1g0206721 49.275 69 34 1 2 70 9 76 2.29e-18 78.2
Msa1332170 MtrunA17_Chr1g0206701 49.275 69 34 1 2 70 9 76 2.32e-18 78.2
Msa1332170 MtrunA17_Chr1g0208581 46.377 69 36 1 2 70 9 76 2.66e-18 77.8
Msa1332170 MtrunA17_Chr5g0419601 51.429 70 33 1 1 70 8 76 4.53e-18 77.4
Msa1332170 MtrunA17_Chr1g0149391 50.725 69 33 1 2 70 9 76 5.13e-18 77.4
Msa1332170 MtrunA17_Chr4g0052081 39.785 93 50 2 1 88 1 92 8.57e-18 75.5
Msa1332170 MtrunA17_Chr8g0377551 53.659 82 37 1 63 143 1 82 9.02e-18 75.5
Msa1332170 MtrunA17_Chr1g0188671 50.725 69 33 1 2 70 47 114 1.63e-17 76.6
Msa1332170 MtrunA17_Chr2g0317451 50.725 69 33 1 2 70 9 76 1.65e-17 75.9
Msa1332170 MtrunA17_Chr2g0317481 50.725 69 33 1 2 70 9 76 1.72e-17 75.9
Msa1332170 MtrunA17_Chr1g0206991 46.377 69 36 1 2 70 9 76 3.05e-17 74.3
Msa1332170 MtrunA17_Chr4g0052061 34.815 135 81 4 1 132 1 131 7.30e-17 72.4
Msa1332170 MtrunA17_Chr3g0085241 34.615 156 84 7 1 139 40 194 1.13e-16 73.9
Msa1332170 MtrunA17_Chr8g0379021 46.377 69 36 1 2 70 12 79 1.57e-16 72.0
Msa1332170 MtrunA17_Chr1g0187361 47.826 69 35 1 2 70 9 76 1.60e-16 73.2
Msa1332170 MtrunA17_Chr2g0300421 49.296 71 33 2 2 70 7 76 2.29e-16 71.6
Msa1332170 MtrunA17_Chr5g0422421 49.275 69 34 1 2 70 9 76 4.13e-16 72.0
Msa1332170 MtrunA17_Chr1g0180591 35.514 107 61 3 1 102 1 104 4.43e-16 70.9
Msa1332170 MtrunA17_Chr4g0060841 44.304 79 43 1 1 78 1 79 4.81e-16 73.2
Msa1332170 MtrunA17_Chr3g0089151 46.377 69 36 1 2 70 9 76 5.06e-16 69.7
Msa1332170 MtrunA17_Chr5g0422941 47.826 69 35 1 2 70 9 76 7.01e-16 71.6
Msa1332170 MtrunA17_Chr1g0175611 33.962 106 66 3 1 103 1 105 1.12e-15 69.7
Msa1332170 MtrunA17_Chr3g0119901 44.286 70 38 1 1 70 8 76 1.13e-15 70.5
Msa1332170 MtrunA17_Chr8g0357771 38.571 70 42 1 1 70 1 69 1.13e-15 70.1
Msa1332170 MtrunA17_Chr4g0018951 34.848 132 74 5 16 141 26 151 1.62e-15 69.3
Msa1332170 MtrunA17_Chr8g0376821 40.000 70 41 1 1 70 1 69 3.76e-15 68.6
Msa1332170 MtrunA17_Chr2g0300441 45.070 71 36 2 2 70 7 76 6.08e-15 68.9
Msa1332170 MtrunA17_Chr1g0169761 40.000 70 41 1 1 70 1 69 9.37e-15 67.4
Msa1332170 MtrunA17_Chr5g0417661 50.943 53 26 0 1 53 56 108 1.16e-14 66.2
Msa1332170 MtrunA17_Chr2g0333981 44.286 70 38 1 1 70 11 79 1.72e-14 66.6
Msa1332170 MtrunA17_Chr1g0206691 50.000 60 29 1 11 70 1 59 2.02e-14 67.4
Msa1332170 MtrunA17_Chr1g0175601 40.000 70 41 1 1 70 1 69 4.62e-14 65.9
Msa1332170 MtrunA17_Chr3g0111841 50.000 60 29 1 8 67 2 60 8.80e-14 62.4
Msa1332170 MtrunA17_Chr4g0074101 37.143 70 43 1 1 70 1 69 1.30e-13 64.7
Msa1332170 MtrunA17_Chr6g0457851 29.114 158 88 5 1 142 11 160 1.76e-12 63.2
Msa1332170 MtrunA17_Chr1g0187351 45.000 60 32 1 11 70 1 59 2.60e-12 58.5
Msa1332170 MtrunA17_Chr8g0356071 35.714 70 44 1 1 70 1 69 3.36e-12 60.5
Msa1332170 MtrunA17_Chr6g0449851 48.980 49 25 0 1 49 1 49 1.52e-11 60.5
Msa1332170 MtrunA17_Chr1g0212151 30.000 160 86 6 1 143 1 151 1.74e-11 60.5
Msa1332170 MtrunA17_Chr4g0071601 45.714 70 37 1 1 70 11 79 5.86e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332170 AT5G60910.1 80.420 143 28 0 1 143 1 143 2.03e-80 237
Msa1332170 AT1G69120.2 72.727 143 39 0 1 143 1 143 4.54e-75 223
Msa1332170 AT1G69120.1 72.727 143 39 0 1 143 1 143 3.32e-74 222
Msa1332170 AT1G26310.1 71.034 145 40 1 1 143 1 145 2.32e-72 217
Msa1332170 AT3G30260.1 60.839 143 56 0 1 143 1 143 1.71e-55 174
Msa1332170 AT5G15800.1 62.238 143 54 0 1 143 1 143 8.23e-54 170
Msa1332170 AT5G15800.2 62.238 143 54 0 1 143 1 143 1.61e-53 169
Msa1332170 AT3G02310.2 61.429 140 54 0 1 140 1 140 2.63e-53 167
Msa1332170 AT3G02310.1 60.839 143 56 0 1 143 1 143 1.75e-52 166
Msa1332170 AT1G24260.1 60.839 143 54 1 1 141 1 143 2.83e-52 166
Msa1332170 AT1G24260.3 59.459 148 49 2 1 141 1 144 4.55e-52 165
Msa1332170 AT1G24260.2 59.459 148 49 2 1 141 1 144 4.65e-52 166
Msa1332170 AT2G45650.1 58.219 146 53 3 1 143 1 141 1.98e-49 159
Msa1332170 AT2G03710.3 52.083 144 67 2 1 143 1 143 5.36e-47 150
Msa1332170 AT2G03710.2 52.083 144 67 2 1 143 1 143 5.53e-46 150
Msa1332170 AT2G03710.1 52.083 144 67 2 1 143 1 143 5.68e-46 150
Msa1332170 AT3G61120.1 54.861 144 60 3 1 143 1 140 4.54e-44 145
Msa1332170 AT4G09960.2 46.528 144 76 1 1 144 1 143 1.86e-41 137
Msa1332170 AT4G09960.1 46.853 143 75 1 1 143 1 142 3.49e-41 137
Msa1332170 AT4G09960.6 46.853 143 75 1 1 143 2 143 3.66e-41 137
Msa1332170 AT4G09960.5 46.853 143 75 1 1 143 11 152 4.36e-41 137
Msa1332170 AT4G09960.3 46.853 143 75 1 1 143 27 168 9.95e-41 137
Msa1332170 AT4G37940.3 46.853 143 74 2 1 143 1 141 3.83e-40 133
Msa1332170 AT4G37940.4 46.528 144 75 2 1 144 1 142 6.30e-40 133
Msa1332170 AT4G37940.1 46.528 144 75 2 1 144 1 142 1.20e-39 133
Msa1332170 AT4G09960.4 46.853 143 75 1 1 143 96 237 2.39e-39 135
Msa1332170 AT3G57230.2 45.890 146 71 3 1 143 1 141 3.39e-39 129
Msa1332170 AT4G11880.2 48.980 147 66 2 1 143 1 142 1.52e-38 129
Msa1332170 AT4G11880.3 48.980 147 66 2 1 143 1 142 1.52e-38 129
Msa1332170 AT3G57230.1 45.890 146 71 3 1 143 1 141 2.26e-38 130
Msa1332170 AT3G57230.4 45.890 146 71 3 1 143 1 141 2.26e-38 130
Msa1332170 AT4G11880.4 48.980 147 66 2 1 143 1 142 3.84e-38 129
Msa1332170 AT4G11880.1 48.980 147 66 2 1 143 1 142 3.84e-38 129
Msa1332170 AT2G14210.1 48.252 143 73 1 1 143 1 142 4.64e-38 129
Msa1332170 AT2G14210.2 48.252 143 73 1 1 143 1 142 6.38e-38 129
Msa1332170 AT2G42830.2 44.056 143 79 1 1 143 16 157 6.18e-37 127
Msa1332170 AT2G42830.1 44.056 143 79 1 1 143 16 157 6.91e-37 127
Msa1332170 AT3G58780.1 43.357 143 80 1 1 143 16 157 7.34e-37 127
Msa1332170 AT3G58780.5 43.357 143 80 1 1 143 22 163 9.68e-37 126
Msa1332170 AT2G45660.2 47.297 148 67 4 1 143 1 142 1.53e-36 123
Msa1332170 AT3G58780.4 43.357 143 80 1 1 143 16 157 1.71e-36 126
Msa1332170 AT3G57390.3 45.333 150 74 2 1 143 1 149 3.26e-36 124
Msa1332170 AT5G13790.1 52.083 144 61 2 1 144 1 136 3.27e-36 125
Msa1332170 AT5G13790.2 51.701 147 60 3 1 144 1 139 5.56e-36 125
Msa1332170 AT3G57390.1 45.333 150 74 2 1 143 1 149 7.05e-36 124
Msa1332170 AT4G18960.1 44.366 142 78 1 2 143 18 158 1.14e-35 124
Msa1332170 AT2G45660.1 47.297 148 67 4 1 143 1 142 1.19e-35 122
Msa1332170 AT5G60910.2 72.840 81 22 0 63 143 1 81 1.99e-35 121
Msa1332170 AT3G58780.2 42.657 143 74 1 1 143 16 150 4.96e-35 122
Msa1332170 AT5G51870.2 42.857 147 76 3 1 143 1 143 8.50e-35 119
Msa1332170 AT4G22950.2 46.575 146 70 3 1 143 1 141 8.59e-35 119
Msa1332170 AT5G51870.5 42.857 147 76 3 1 143 24 166 1.96e-34 119
Msa1332170 AT5G51870.1 42.857 147 76 3 1 143 1 143 4.51e-34 118
Msa1332170 AT4G22950.3 45.890 146 71 3 1 143 1 141 6.84e-34 118
Msa1332170 AT4G22950.1 45.890 146 71 3 1 143 1 141 6.84e-34 118
Msa1332170 AT5G51870.4 42.857 147 76 3 1 143 1 143 9.87e-34 118
Msa1332170 AT5G51870.3 42.857 147 76 3 1 143 11 153 1.23e-33 118
Msa1332170 AT5G51860.2 42.177 147 77 2 1 143 1 143 1.80e-33 117
Msa1332170 AT5G51860.1 42.177 147 77 2 1 143 1 143 1.97e-33 117
Msa1332170 AT2G22630.1 41.667 144 82 2 1 144 1 142 3.47e-33 116
Msa1332170 AT2G22630.2 41.667 144 82 2 1 144 1 142 3.47e-33 116
Msa1332170 AT5G62165.17 41.333 150 73 3 1 143 1 142 3.74e-33 114
Msa1332170 AT5G62165.12 41.333 150 73 3 1 143 1 142 3.74e-33 114
Msa1332170 AT5G62165.11 41.333 150 73 3 1 143 1 142 3.74e-33 114
Msa1332170 AT5G62165.6 41.333 150 73 3 1 143 1 142 3.89e-33 114
Msa1332170 AT5G62165.9 41.333 150 73 3 1 143 1 142 3.89e-33 114
Msa1332170 AT5G62165.7 41.333 150 73 3 1 143 1 142 3.89e-33 114
Msa1332170 AT5G62165.8 41.333 150 73 3 1 143 1 142 3.89e-33 114
Msa1332170 AT5G62165.13 41.333 150 73 3 1 143 1 142 3.89e-33 114
Msa1332170 AT3G58780.3 37.725 167 80 1 1 143 16 182 5.03e-33 117
Msa1332170 AT4G24540.1 47.260 146 70 3 1 143 1 142 1.04e-32 115
Msa1332170 AT5G62165.10 41.958 143 82 1 1 143 1 142 4.04e-32 113
Msa1332170 AT5G62165.4 41.958 143 82 1 1 143 1 142 4.04e-32 113
Msa1332170 AT5G62165.3 41.958 143 82 1 1 143 1 142 5.35e-32 113
Msa1332170 AT5G62165.1 41.958 143 82 1 1 143 1 142 5.35e-32 113
Msa1332170 AT5G62165.2 41.958 143 82 1 1 143 1 142 5.35e-32 113
Msa1332170 AT2G22540.3 45.070 142 71 3 1 139 1 138 2.27e-31 112
Msa1332170 AT2G22540.1 45.070 142 71 3 1 139 1 138 2.27e-31 112
Msa1332170 AT5G20240.2 42.759 145 75 4 1 143 1 139 3.67e-31 109
Msa1332170 AT5G20240.1 42.759 145 75 4 1 143 1 139 2.42e-30 108
Msa1332170 AT1G69120.3 61.728 81 31 0 63 143 1 81 4.40e-30 107
Msa1332170 AT1G71692.1 43.333 150 78 1 1 143 1 150 1.56e-29 107
Msa1332170 AT2G22540.2 43.662 142 68 3 1 139 1 133 3.07e-29 107
Msa1332170 AT5G23260.3 39.474 152 74 3 1 144 1 142 3.32e-29 107
Msa1332170 AT5G23260.1 39.474 152 74 3 1 144 17 158 8.25e-29 106
Msa1332170 AT5G23260.2 39.735 151 73 3 1 143 1 141 8.75e-29 106
Msa1332170 AT5G23260.4 39.735 151 73 3 1 143 17 157 1.02e-28 106
Msa1332170 AT3G54340.1 38.411 151 73 3 1 143 1 139 1.77e-28 104
Msa1332170 AT5G10140.2 39.161 143 79 2 1 143 1 135 3.93e-28 102
Msa1332170 AT5G10140.4 39.161 143 79 2 1 143 1 135 6.88e-28 102
Msa1332170 AT5G65070.4 43.448 145 70 3 1 143 1 135 8.32e-28 100
Msa1332170 AT5G10140.1 39.161 143 79 2 1 143 1 135 8.56e-28 102
Msa1332170 AT5G10140.3 39.161 143 79 2 1 143 1 135 1.01e-27 101
Msa1332170 AT5G65080.3 43.357 143 73 3 1 143 8 142 3.38e-27 100
Msa1332170 AT5G65070.1 43.448 145 70 3 1 143 1 135 7.28e-27 99.8
Msa1332170 AT5G65050.2 39.583 144 77 3 1 143 1 135 1.41e-26 98.6
Msa1332170 AT5G65060.3 39.161 143 79 2 1 143 1 135 1.83e-26 98.6
Msa1332170 AT5G65060.1 39.161 143 79 2 1 143 1 135 2.92e-26 98.2
Msa1332170 AT5G65050.1 39.583 144 77 3 1 143 1 135 3.34e-26 97.8
Msa1332170 AT5G65050.3 39.583 144 77 3 1 143 1 135 3.78e-26 97.8
Msa1332170 AT5G62165.14 61.111 72 27 1 1 72 1 71 8.95e-26 94.4
Msa1332170 AT5G65050.5 38.889 144 67 3 1 143 1 124 1.67e-24 93.2
Msa1332170 AT5G65070.5 39.157 166 78 4 1 143 1 166 1.74e-24 94.0
Msa1332170 AT5G65070.2 39.157 166 78 4 1 143 1 166 2.39e-24 94.0
Msa1332170 AT5G65060.2 38.462 143 69 3 1 143 1 124 3.67e-24 92.4
Msa1332170 AT5G65080.2 41.667 144 73 4 1 143 8 141 4.71e-23 90.1
Msa1332170 AT1G77980.1 41.611 149 77 5 1 140 1 148 1.36e-22 91.3
Msa1332170 AT1G31140.2 37.838 148 84 3 1 143 1 145 1.45e-21 86.7
Msa1332170 AT1G77080.11 39.161 143 79 3 1 143 1 135 1.88e-21 85.1
Msa1332170 AT1G77080.5 39.161 143 79 3 1 143 1 135 2.78e-21 84.7
Msa1332170 AT5G65070.3 36.723 177 68 5 1 143 1 167 5.16e-21 85.5
Msa1332170 AT1G77080.4 39.161 143 79 3 1 143 1 135 5.92e-21 84.3
Msa1332170 AT1G31140.1 36.986 146 86 3 1 143 1 143 1.60e-20 83.6
Msa1332170 AT1G22130.1 50.633 79 39 0 1 79 1 79 1.90e-20 85.5
Msa1332170 AT1G77950.3 48.864 88 43 1 1 86 1 88 6.70e-20 82.8
Msa1332170 AT1G77950.2 48.864 88 43 1 1 86 1 88 6.70e-20 82.8
Msa1332170 AT1G77950.1 48.864 88 43 1 1 86 1 88 6.70e-20 82.8
Msa1332170 AT1G77950.4 48.864 88 43 1 1 86 1 88 6.70e-20 82.8
Msa1332170 AT1G77080.12 39.161 143 75 4 1 143 1 131 1.67e-18 77.0
Msa1332170 AT1G77080.2 39.161 143 75 4 1 143 1 131 4.29e-18 77.0
Msa1332170 AT1G77080.8 34.731 167 80 5 1 143 1 162 5.46e-18 77.4
Msa1332170 AT1G18750.4 40.506 79 46 1 1 78 1 79 1.77e-17 77.8
Msa1332170 AT1G18750.1 40.506 79 46 1 1 78 1 79 2.14e-17 77.8
Msa1332170 AT1G18750.3 40.506 79 46 1 1 78 1 79 2.19e-17 77.8
Msa1332170 AT2G34440.1 35.238 105 64 3 1 105 1 101 2.72e-17 74.3
Msa1332170 AT4G37435.1 42.697 89 45 2 1 88 1 84 5.12e-17 73.9
Msa1332170 AT1G01530.1 46.377 69 36 1 1 69 6 73 1.84e-16 73.6
Msa1332170 AT1G65360.1 42.466 73 41 1 1 73 6 77 3.98e-16 72.4
Msa1332170 AT4G36590.1 41.892 74 42 1 2 75 7 79 8.30e-16 72.0
Msa1332170 AT2G24840.1 44.286 70 38 1 1 70 62 130 1.26e-15 71.6
Msa1332170 AT5G60440.1 43.478 69 38 1 2 70 7 74 3.76e-15 70.9
Msa1332170 AT2G03060.3 40.506 79 46 1 1 78 1 79 7.13e-15 70.5
Msa1332170 AT2G03060.7 40.506 79 46 1 1 78 1 79 7.13e-15 70.5
Msa1332170 AT2G03060.1 40.506 79 46 1 1 78 1 79 7.13e-15 70.5
Msa1332170 AT2G03060.2 40.506 79 46 1 1 78 1 79 7.81e-15 70.5
Msa1332170 AT3G66656.1 39.437 71 42 1 1 71 1 70 3.80e-14 66.2
Msa1332170 AT1G47760.1 37.838 74 45 1 1 74 1 73 8.09e-14 65.5
Msa1332170 AT3G04100.1 36.047 86 53 2 2 87 14 97 1.01e-13 65.9
Msa1332170 AT1G69540.1 38.462 78 48 0 1 78 1 78 1.56e-13 66.6
Msa1332170 AT2G26320.1 42.169 83 38 2 1 73 17 99 2.25e-13 62.8
Msa1332170 AT1G69540.2 38.462 78 48 0 1 78 1 78 2.31e-13 66.2
Msa1332170 AT1G72350.1 42.254 71 38 1 2 72 43 110 1.73e-12 62.8
Msa1332170 AT1G29962.1 40.580 69 40 1 2 70 8 75 3.47e-12 61.2
Msa1332170 AT1G28460.1 39.130 69 41 1 2 70 8 75 1.84e-11 59.3

Find 18 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGCATTGTTAGGAAAAT+TGG 0.114215 8_4:-52075689 Msa1332170:intron
TCTCAAAGAGCTTCAAAGTT+TGG 0.334932 8_4:-52075495 Msa1332170:CDS
ATACGAGAGATGTTCGTATA+TGG 0.365309 8_4:-52077104 Msa1332170:CDS
CATGCATTGTTAGGAAAATT+GGG 0.366755 8_4:-52075688 Msa1332170:intron
GGAGAAGACTTGGATGGTTT+AGG 0.374421 8_4:-52075518 Msa1332170:CDS
GGGGAAGAGTGCAGTTGAAG+AGG 0.468420 8_4:-52078652 Msa1332170:CDS
TTGAATACTCCAGCGATCCT+TGG 0.472174 8_4:-52078496 Msa1332170:intron
GCACATACACCGCAGCTCCT+TGG 0.505499 8_4:+52078870 None:intergenic
CGCAAAACTCAAGGCTAGGA+TGG 0.531312 8_4:-52075655 Msa1332170:CDS
AAGAACGTACCAAGGATCGC+TGG 0.539592 8_4:+52078487 None:intergenic
GAAGACCTACATTTGGTGAC+TGG 0.579523 8_4:+52077059 None:intergenic
CTCTCAAACAAATTAGATCA+CGG 0.597625 8_4:-52075454 Msa1332170:CDS
TCTAGAGCACGCAAAACTCA+AGG 0.598390 8_4:-52075664 Msa1332170:CDS
AGAGATGTTCGTATATGGAA+AGG 0.602686 8_4:-52077099 Msa1332170:CDS
AGCACGCAAAACTCAAGGCT+AGG 0.604490 8_4:-52075659 Msa1332170:CDS
CAAACAAATTAGATCACGGA+AGG 0.617902 8_4:-52075450 Msa1332170:intron
TTTATGGGAGAAGACTTGGA+TGG 0.637012 8_4:-52075524 Msa1332170:CDS
AAGTGCTTCAGAGAAATCAA+AGG 0.661617 8_4:-52075632 Msa1332170:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAACTTAACTTAATAA+TGG - chr8_4:52075803-52075822 Msa1332170:intron 15.0%
!! AATAAAATATTACAGAAAAC+AGG + chr8_4:52075949-52075968 None:intergenic 15.0%
!!! ATTTTAGTATATTCAAGTAT+AGG + chr8_4:52076027-52076046 None:intergenic 15.0%
!!! AATATGTTTTAAAGATTTCA+AGG + chr8_4:52076278-52076297 None:intergenic 15.0%
!! TAACAGAATAAAAAAGAAAA+AGG - chr8_4:52076357-52076376 Msa1332170:intron 15.0%
!!! CATTTTTTTTTATCAGAAAA+CGG - chr8_4:52076490-52076509 Msa1332170:intron 15.0%
!!! ATTTTTTTTTATCAGAAAAC+GGG - chr8_4:52076491-52076510 Msa1332170:intron 15.0%
!!! TTTTTTTTTTGTTAACAGTA+TGG - chr8_4:52077064-52077083 Msa1332170:intron 15.0%
!!! CGTTTTTTAAATAATTTAAG+AGG + chr8_4:52077592-52077611 None:intergenic 15.0%
!!! ATCAATTTGCTAATTTTAAT+GGG - chr8_4:52078103-52078122 Msa1332170:intron 15.0%
!! TAGGACAAATTAAAATTGAA+GGG + chr8_4:52076008-52076027 None:intergenic 20.0%
!! ATAGGACAAATTAAAATTGA+AGG + chr8_4:52076009-52076028 None:intergenic 20.0%
!! CTGTTTATAAATATTCATCA+TGG + chr8_4:52076132-52076151 None:intergenic 20.0%
!! TTCATTTGGAAGAATTTATT+CGG + chr8_4:52076798-52076817 None:intergenic 20.0%
!!! TATTCTATTTTTGGATTGAA+AGG + chr8_4:52077250-52077269 None:intergenic 20.0%
!!! TTTACTTGGTATTCTATTTT+TGG + chr8_4:52077259-52077278 None:intergenic 20.0%
!!! TGGTTGTTAATATTTTTACT+TGG + chr8_4:52077273-52077292 None:intergenic 20.0%
!!! TTAATGTCCATACAAATTTT+AGG - chr8_4:52077354-52077373 Msa1332170:intron 20.0%
!! TTTATTACAAAACGATTTAG+GGG + chr8_4:52077625-52077644 None:intergenic 20.0%
!! GTTTATTACAAAACGATTTA+GGG + chr8_4:52077626-52077645 None:intergenic 20.0%
!! TGTTTATTACAAAACGATTT+AGG + chr8_4:52077627-52077646 None:intergenic 20.0%
!! AACATAACATAGATAGAATT+TGG + chr8_4:52077877-52077896 None:intergenic 20.0%
!! ATCTATGTTATGTTAATACT+CGG - chr8_4:52077883-52077902 Msa1332170:intron 20.0%
!!! GATCAATTTGCTAATTTTAA+TGG - chr8_4:52078102-52078121 Msa1332170:intron 20.0%
!! TTGTTGAATATGCAATATTA+AGG - chr8_4:52078228-52078247 Msa1332170:intron 20.0%
!! TACATTAGATTAATTGAAAC+TGG - chr8_4:52078467-52078486 Msa1332170:intron 20.0%
!! GGAATAAAATTAATATGCAA+TGG - chr8_4:52078639-52078658 Msa1332170:CDS 20.0%
!! TGAATTATACTCACTTAATT+TGG - chr8_4:52078838-52078857 Msa1332170:intron 20.0%
!! AAATAGATTCATACATAACT+TGG + chr8_4:52078878-52078897 None:intergenic 20.0%
! ATAAAACGAAAAAAGAACCA+AGG - chr8_4:52075320-52075339 Msa1332170:intron 25.0%
!!! TGCTGATTTGAAATAATGAA+GGG + chr8_4:52075369-52075388 None:intergenic 25.0%
!!! ATGCTGATTTGAAATAATGA+AGG + chr8_4:52075370-52075389 None:intergenic 25.0%
!! CTCATTATTTTCTCTACTAA+AGG - chr8_4:52075680-52075699 Msa1332170:intron 25.0%
! TACACAGAAATTATGATGTT+TGG + chr8_4:52075859-52075878 None:intergenic 25.0%
!! TCAATTTTTCTTCCATTGTA+CGG - chr8_4:52075976-52075995 Msa1332170:intron 25.0%
!!! ATTGATTTGTTTAAAGTTGC+TGG - chr8_4:52076155-52076174 Msa1332170:intron 25.0%
!!! ATCTAGTTTTCTTCTCTTAT+AGG + chr8_4:52076244-52076263 None:intergenic 25.0%
!!! ATGTTTTAAAGATTTCAAGG+TGG + chr8_4:52076275-52076294 None:intergenic 25.0%
! TCTCAATAAGAATGAGTTTA+GGG + chr8_4:52076693-52076712 None:intergenic 25.0%
! ATAAACAACAACTTAGTTCA+TGG - chr8_4:52076757-52076776 Msa1332170:intron 25.0%
! GTGATATACTTGAATTAACT+AGG + chr8_4:52076938-52076957 None:intergenic 25.0%
!!! CTTAATTGGTTTGGTTTTTT+TGG - chr8_4:52077206-52077225 Msa1332170:intron 25.0%
! CATTACTCCTAAAATTTGTA+TGG + chr8_4:52077364-52077383 None:intergenic 25.0%
!!! TAAAATTTTGAGGGTTGAAA+TGG + chr8_4:52077388-52077407 None:intergenic 25.0%
!! TTTCAACCCTCAAAATTTTA+AGG - chr8_4:52077388-52077407 Msa1332170:intron 25.0%
!! TTCAACCCTCAAAATTTTAA+GGG - chr8_4:52077389-52077408 Msa1332170:intron 25.0%
!!! TTCTTAGTGTCAATTTTGAT+GGG + chr8_4:52077467-52077486 None:intergenic 25.0%
! TTATTACAAAACGATTTAGG+GGG + chr8_4:52077624-52077643 None:intergenic 25.0%
!! GATCAACATATTAACTTGAA+TGG - chr8_4:52077676-52077695 Msa1332170:intron 25.0%
!! TTTTGGTCCTAAAATTGAAA+GGG + chr8_4:52077842-52077861 None:intergenic 25.0%
!!! ATTTTGGTCCTAAAATTGAA+AGG + chr8_4:52077843-52077862 None:intergenic 25.0%
!!! TTTGGAGTAAATCAACATTT+TGG + chr8_4:52077859-52077878 None:intergenic 25.0%
!!! ATATTTTAATTGAAGAGACG+AGG - chr8_4:52078146-52078165 Msa1332170:intron 25.0%
! GTAAATATAAGCAAAGAGTT+TGG + chr8_4:52078402-52078421 None:intergenic 25.0%
!!! AGCAAAGATAATTTTGTTTC+AGG - chr8_4:52078618-52078637 Msa1332170:CDS 25.0%
!!! CTTTGTTTCAGGAATTTTAT+GGG - chr8_4:52078668-52078687 Msa1332170:exon 25.0%
ATTCCAATTCCAACCAAAAA+TGG - chr8_4:52075529-52075548 Msa1332170:CDS 30.0%
TTCCAATTCCAACCAAAAAT+GGG - chr8_4:52075530-52075549 Msa1332170:CDS 30.0%
!!! AAGTCACTTTTTCAAAGAGA+AGG - chr8_4:52075600-52075619 Msa1332170:intron 30.0%
GGTATATAGATATAGATGTG+TGG + chr8_4:52075928-52075947 None:intergenic 30.0%
! ATTTGTTTAAAGTTGCTGGT+TGG - chr8_4:52076159-52076178 Msa1332170:intron 30.0%
! TAGTTTTCTTCTCTTATAGG+AGG + chr8_4:52076241-52076260 None:intergenic 30.0%
GATTATTGATGCCATGAAAA+GGG + chr8_4:52076666-52076685 None:intergenic 30.0%
TGATTATTGATGCCATGAAA+AGG + chr8_4:52076667-52076686 None:intergenic 30.0%
GTCTCAATAAGAATGAGTTT+AGG + chr8_4:52076694-52076713 None:intergenic 30.0%
TCCATAACCATGAACTAATA+GGG + chr8_4:52076737-52076756 None:intergenic 30.0%
TTCCATAACCATGAACTAAT+AGG + chr8_4:52076738-52076757 None:intergenic 30.0%
AACAACTTAGTTCATGGTTA+TGG - chr8_4:52076763-52076782 Msa1332170:intron 30.0%
GTATTTGATCCTATACTGAA+GGG + chr8_4:52076883-52076902 None:intergenic 30.0%
CTTCAGTATAGGATCAAATA+CGG - chr8_4:52076882-52076901 Msa1332170:intron 30.0%
! TGTGCAGTTTTTCTGATTTT+AGG - chr8_4:52076980-52076999 Msa1332170:intron 30.0%
AATTAAGAAAACCAAGCTCA+AGG + chr8_4:52077193-52077212 None:intergenic 30.0%
!! TTGAGCTTGGTTTTCTTAAT+TGG - chr8_4:52077192-52077211 Msa1332170:intron 30.0%
!! CTTGGTTTTCTTAATTGGTT+TGG - chr8_4:52077197-52077216 Msa1332170:intron 30.0%
TTGAAAGGACATTCATTGAA+GGG + chr8_4:52077235-52077254 None:intergenic 30.0%
ATTGAAAGGACATTCATTGA+AGG + chr8_4:52077236-52077255 None:intergenic 30.0%
! TAGAACTAGACTCTTTCTTT+TGG + chr8_4:52077293-52077312 None:intergenic 30.0%
! TGACACCCTTAAAATTTTGA+GGG + chr8_4:52077397-52077416 None:intergenic 30.0%
! TTGACACCCTTAAAATTTTG+AGG + chr8_4:52077398-52077417 None:intergenic 30.0%
! CTTCTTAGTGTCAATTTTGA+TGG + chr8_4:52077468-52077487 None:intergenic 30.0%
TATGCTTCTCTTAAGATTTC+AGG + chr8_4:52077498-52077517 None:intergenic 30.0%
TATTACAAAACGATTTAGGG+GGG + chr8_4:52077623-52077642 None:intergenic 30.0%
! ACATCGAACATTTAAAATCG+TGG - chr8_4:52077723-52077742 Msa1332170:intron 30.0%
!! TTGATGACCCTTTCAATTTT+AGG - chr8_4:52077832-52077851 Msa1332170:intron 30.0%
TAACCAAAGAGACAATACAA+CGG - chr8_4:52078274-52078293 Msa1332170:intron 30.0%
TAAGCAAAGAGTTTGGATTT+GGG + chr8_4:52078395-52078414 None:intergenic 30.0%
ATAAGCAAAGAGTTTGGATT+TGG + chr8_4:52078396-52078415 None:intergenic 30.0%
TAGAGTACAGATTGTAACTT+TGG - chr8_4:52078437-52078456 Msa1332170:intron 30.0%
CATGCATTGTTAGGAAAATT+GGG - chr8_4:52078519-52078538 Msa1332170:CDS 30.0%
!!! GCTTTGTTTCAGGAATTTTA+TGG - chr8_4:52078667-52078686 Msa1332170:exon 30.0%
CTCTCAAACAAATTAGATCA+CGG - chr8_4:52078753-52078772 Msa1332170:intron 30.0%
! TGCTACATTGAGAATACTTT+TGG - chr8_4:52078793-52078812 Msa1332170:intron 30.0%
CTAGCTATCACAACATGAAT+TGG + chr8_4:52075497-52075516 None:intergenic 35.0%
TCCAATTCCAACCAAAAATG+GGG - chr8_4:52075531-52075550 Msa1332170:CDS 35.0%
!!! ACTTTTTCAAAGAGAAGGTC+TGG - chr8_4:52075605-52075624 Msa1332170:intron 35.0%
GAAAGAAAAAGAACGTACCA+AGG + chr8_4:52075731-52075750 None:intergenic 35.0%
CTTAATAATGGTTTCTCTCC+TGG - chr8_4:52075815-52075834 Msa1332170:intron 35.0%
ATTTAGATGCATGATGTACC+AGG + chr8_4:52075836-52075855 None:intergenic 35.0%
!! GACATGCTAATTTTAGTCTG+TGG - chr8_4:52076439-52076458 Msa1332170:intron 35.0%
!! TCTACGTGTGTTGATTTGAT+TGG + chr8_4:52076590-52076609 None:intergenic 35.0%
! CATTCTTTACACCCTTTTCA+TGG - chr8_4:52076652-52076671 Msa1332170:intron 35.0%
TAACCATGAACTAATAGGGT+TGG + chr8_4:52076733-52076752 None:intergenic 35.0%
ACCCTATTAGTTCATGGTTA+TGG - chr8_4:52076733-52076752 Msa1332170:intron 35.0%
AGTTCATGGTTATGGAAGAA+AGG - chr8_4:52076771-52076790 Msa1332170:intron 35.0%
TGGTTTACATGGTGTTCATT+TGG + chr8_4:52076812-52076831 None:intergenic 35.0%
AAATGAACACCATGTAAACC+AGG - chr8_4:52076811-52076830 Msa1332170:intron 35.0%
ACATTTGTTCCTGGTTTACA+TGG + chr8_4:52076823-52076842 None:intergenic 35.0%
CTTTATGCAACATTTGTTCC+TGG + chr8_4:52076832-52076851 None:intergenic 35.0%
CGTATTTGATCCTATACTGA+AGG + chr8_4:52076884-52076903 None:intergenic 35.0%
CAGAAAAACTGCACATTTGA+AGG + chr8_4:52076975-52076994 None:intergenic 35.0%
ATACGAGAGATGTTCGTATA+TGG - chr8_4:52077103-52077122 Msa1332170:CDS 35.0%
AGAGATGTTCGTATATGGAA+AGG - chr8_4:52077108-52077127 Msa1332170:CDS 35.0%
!!! TCAATTTTGATGGGCTAGTT+TGG + chr8_4:52077458-52077477 None:intergenic 35.0%
!!! GGACTATTTGTTTTAGACCT+TGG + chr8_4:52077523-52077542 None:intergenic 35.0%
!! TTAGATTGGTCTTGTGGTAT+TGG + chr8_4:52077544-52077563 None:intergenic 35.0%
TTTCATTGACCCAGTTAGAT+TGG + chr8_4:52077558-52077577 None:intergenic 35.0%
GTTTACCTATGATACCTCAA+GGG + chr8_4:52077938-52077957 None:intergenic 35.0%
ATACGTCATCGATAGAGAAT+TGG + chr8_4:52078188-52078207 None:intergenic 35.0%
TGTATTGTCTCTTTGGTTAG+CGG + chr8_4:52078273-52078292 None:intergenic 35.0%
! AAATTTAGGTGTTACGCGTA+TGG + chr8_4:52078305-52078324 None:intergenic 35.0%
GCATGCATTGTTAGGAAAAT+TGG - chr8_4:52078518-52078537 Msa1332170:CDS 35.0%
AAGTGCTTCAGAGAAATCAA+AGG - chr8_4:52078575-52078594 Msa1332170:CDS 35.0%
! GAATTTTATGGGAGAAGACT+TGG - chr8_4:52078679-52078698 Msa1332170:exon 35.0%
TCTCAAAGAGCTTCAAAGTT+TGG - chr8_4:52078712-52078731 Msa1332170:intron 35.0%
CAAACAAATTAGATCACGGA+AGG - chr8_4:52078757-52078776 Msa1332170:intron 35.0%
!!! TGAGAATACTTTTGGTGATG+TGG - chr8_4:52078801-52078820 Msa1332170:intron 35.0%
AAAAAAGAACCAAGGAGCTG+CGG - chr8_4:52075328-52075347 Msa1332170:intron 40.0%
ACATGAATTGGAGGAGAGTT+AGG + chr8_4:52075485-52075504 None:intergenic 40.0%
GCTATCACAACATGAATTGG+AGG + chr8_4:52075494-52075513 None:intergenic 40.0%
!!! TCCCCATTTTTGGTTGGAAT+TGG + chr8_4:52075535-52075554 None:intergenic 40.0%
AATTCCAACCAAAAATGGGG+AGG - chr8_4:52075534-52075553 Msa1332170:intron 40.0%
ATTCCAACCAAAAATGGGGA+GGG - chr8_4:52075535-52075554 Msa1332170:intron 40.0%
GAAGGGAAAATACCGTACAA+TGG + chr8_4:52075991-52076010 None:intergenic 40.0%
! GAGGAATCTAGTGGACAATT+GGG + chr8_4:52076216-52076235 None:intergenic 40.0%
! AGAGGAATCTAGTGGACAAT+TGG + chr8_4:52076217-52076236 None:intergenic 40.0%
TCTTCTCTTATAGGAGGAAG+AGG + chr8_4:52076235-52076254 None:intergenic 40.0%
CTTCCAACCCTATTAGTTCA+TGG - chr8_4:52076727-52076746 Msa1332170:intron 40.0%
AGGGAAGCTTTCATTGTCAT+GGG + chr8_4:52076864-52076883 None:intergenic 40.0%
AAGGGAAGCTTTCATTGTCA+TGG + chr8_4:52076865-52076884 None:intergenic 40.0%
TGAAAGCTTCCCTTCAGTAT+AGG - chr8_4:52076871-52076890 Msa1332170:intron 40.0%
GATTACATGCATGCATCTTC+AGG + chr8_4:52077009-52077028 None:intergenic 40.0%
AGGAGATGAAGACCTACATT+TGG + chr8_4:52077158-52077177 None:intergenic 40.0%
ATCTCAATGAACCTTGAGCT+TGG - chr8_4:52077179-52077198 Msa1332170:intron 40.0%
! CTTAAGAGAAGCATACTCCA+AGG - chr8_4:52077503-52077522 Msa1332170:intron 40.0%
TACCACAAGACCAATCTAAC+TGG - chr8_4:52077545-52077564 Msa1332170:intron 40.0%
ACCACAAGACCAATCTAACT+GGG - chr8_4:52077546-52077565 Msa1332170:intron 40.0%
TCTCTTTCTCAAATCCCTTG+AGG - chr8_4:52077921-52077940 Msa1332170:intron 40.0%
! CAAATCCCTTGAGGTATCAT+AGG - chr8_4:52077930-52077949 Msa1332170:intron 40.0%
GGTTTACCTATGATACCTCA+AGG + chr8_4:52077939-52077958 None:intergenic 40.0%
!! AATGGCAACTGCTTTGTTTC+AGG - chr8_4:52078657-52078676 Msa1332170:CDS 40.0%
TTTATGGGAGAAGACTTGGA+TGG - chr8_4:52078683-52078702 Msa1332170:five_prime_UTR 40.0%
GAATTGGAGGAGAGTTAGGT+AGG + chr8_4:52075481-52075500 None:intergenic 45.0%
TTCCAACCAAAAATGGGGAG+GGG - chr8_4:52075536-52075555 Msa1332170:intron 45.0%
TTGAATACTCCAGCGATCCT+TGG - chr8_4:52075711-52075730 Msa1332170:intron 45.0%
TAGGAGGAAGAGGAATCTAG+TGG + chr8_4:52076225-52076244 None:intergenic 45.0%
TGACCGATCAAGTGTGTCAA+CGG - chr8_4:52076403-52076422 Msa1332170:intron 45.0%
GGGAAGCTTTCATTGTCATG+GGG + chr8_4:52076863-52076882 None:intergenic 45.0%
AGTGACCAGTCACCAAATGT+AGG - chr8_4:52077143-52077162 Msa1332170:intron 45.0%
! GAAGACCTACATTTGGTGAC+TGG + chr8_4:52077151-52077170 None:intergenic 45.0%
GCTCAAGGTTCATTGAGATG+AGG + chr8_4:52077178-52077197 None:intergenic 45.0%
!! ACCCAGTTAGATTGGTCTTG+TGG + chr8_4:52077550-52077569 None:intergenic 45.0%
TACAAAACGATTTAGGGGGG+AGG + chr8_4:52077620-52077639 None:intergenic 45.0%
GGTAAACCACTCATGTTACG+TGG - chr8_4:52077951-52077970 Msa1332170:intron 45.0%
AAACCACTCATGTTACGTGG+TGG - chr8_4:52077954-52077973 Msa1332170:intron 45.0%
TTTCCACCACGTAACATGAG+TGG + chr8_4:52077960-52077979 None:intergenic 45.0%
!! GTTAGCGGATTGTGTTGTAC+AGG + chr8_4:52078258-52078277 None:intergenic 45.0%
GCACCGTTGTATTGTCTCTT+TGG + chr8_4:52078280-52078299 None:intergenic 45.0%
! TTTAGGTGTTACGCGTATGG+TGG + chr8_4:52078302-52078321 None:intergenic 45.0%
GCATGCATGCATGCATTGTT+AGG - chr8_4:52078510-52078529 Msa1332170:CDS 45.0%
! TCTAGAGCACGCAAAACTCA+AGG - chr8_4:52078543-52078562 Msa1332170:CDS 45.0%
GGAGAAGACTTGGATGGTTT+AGG - chr8_4:52078689-52078708 Msa1332170:five_prime_UTR 45.0%
!! TATAATAATAATATATGTTA+CGG - chr8_4:52076081-52076100 Msa1332170:intron 5.0%
!! AAAAAAAAAAAAGAAAATTT+AGG + chr8_4:52078319-52078338 None:intergenic 5.0%
!!! TTCCCCTCCCCATTTTTGGT+TGG + chr8_4:52075541-52075560 None:intergenic 50.0%
! ACTCTTCCCCTCCCCATTTT+TGG + chr8_4:52075545-52075564 None:intergenic 50.0%
AAGAACGTACCAAGGATCGC+TGG + chr8_4:52075723-52075742 None:intergenic 50.0%
!! AAAGTTGCTGGTTGGTGACG+TGG - chr8_4:52076167-52076186 Msa1332170:intron 50.0%
GACCGATCAAGTGTGTCAAC+GGG - chr8_4:52076404-52076423 Msa1332170:intron 50.0%
CTCCCGTTGACACACTTGAT+CGG + chr8_4:52076409-52076428 None:intergenic 50.0%
! GGGTGCTGCAACAACTCAAA+TGG - chr8_4:52076511-52076530 Msa1332170:intron 50.0%
AAACGATTTAGGGGGGAGGA+TGG + chr8_4:52077616-52077635 None:intergenic 50.0%
AGCACGCAAAACTCAAGGCT+AGG - chr8_4:52078548-52078567 Msa1332170:CDS 50.0%
CGCAAAACTCAAGGCTAGGA+TGG - chr8_4:52078552-52078571 Msa1332170:CDS 50.0%
! GGGGAAGAGTGCAGTTGAAG+AGG - chr8_4:52075555-52075574 Msa1332170:intron 55.0%
GCACATACACCGCAGCTCCT+TGG + chr8_4:52075340-52075359 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52075318 52078911 52075318 ID=Msa1332170;Name=Msa1332170
chr8_4 mRNA 52075318 52078911 52075318 ID=Msa1332170-mRNA-1;Parent=Msa1332170;Name=Msa1332170-mRNA-1;_AED=0.04;_eAED=0.04;_QI=65|0.8|0.83|1|0.8|0.5|6|0|144
chr8_4 exon 52075318 52075320 52075318 ID=Msa1332170-mRNA-1:exon:15547;Parent=Msa1332170-mRNA-1
chr8_4 exon 52075451 52075550 52075451 ID=Msa1332170-mRNA-1:exon:15546;Parent=Msa1332170-mRNA-1
chr8_4 exon 52075633 52075697 52075633 ID=Msa1332170-mRNA-1:exon:15545;Parent=Msa1332170-mRNA-1
chr8_4 exon 52077069 52077147 52077069 ID=Msa1332170-mRNA-1:exon:15544;Parent=Msa1332170-mRNA-1
chr8_4 exon 52078497 52078712 52078497 ID=Msa1332170-mRNA-1:exon:15543;Parent=Msa1332170-mRNA-1
chr8_4 exon 52078878 52078911 52078878 ID=Msa1332170-mRNA-1:exon:15542;Parent=Msa1332170-mRNA-1
chr8_4 five_prime_UTR 52078878 52078911 52078878 ID=Msa1332170-mRNA-1:five_prime_utr;Parent=Msa1332170-mRNA-1
chr8_4 five_prime_UTR 52078682 52078712 52078682 ID=Msa1332170-mRNA-1:five_prime_utr;Parent=Msa1332170-mRNA-1
chr8_4 CDS 52078497 52078681 52078497 ID=Msa1332170-mRNA-1:cds;Parent=Msa1332170-mRNA-1
chr8_4 CDS 52077069 52077147 52077069 ID=Msa1332170-mRNA-1:cds;Parent=Msa1332170-mRNA-1
chr8_4 CDS 52075633 52075697 52075633 ID=Msa1332170-mRNA-1:cds;Parent=Msa1332170-mRNA-1
chr8_4 CDS 52075451 52075550 52075451 ID=Msa1332170-mRNA-1:cds;Parent=Msa1332170-mRNA-1
chr8_4 CDS 52075318 52075320 52075318 ID=Msa1332170-mRNA-1:cds;Parent=Msa1332170-mRNA-1
Gene Sequence

>Msa1332170

ATGGGGAGGGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATCAATAGACAAGTCACTTTTTCAAAGAGAAGGTCTGGTTTGTTGAAGAAAGCACAAGAGATCTCTGTGCTTTGTGATGCTGATGTTGCTCTCATTATTTTCTCTACTAAAGGAAAGCTTTTTGAATACTCCAGCGATCCTTGTATGGAAAAAATTCTTGAACGATACGAGAGATGTTCGTATATGGAAAGGCAGCTTGTTACAAGTGACCAGTCACCAAATGAAAATTGGGTTCTAGAGCACGCAAAACTCAAGGCTAGGATGGAAGTGCTTCAGAGAAATCAAAGGAATTTTATGGGAGAAGACTTGGATGGTTTAGGTCTCAAAGAGCTTCAAAGTTTGGAGCAACAACTTGATTCAGCTCTCAAACAAATTAGATCACGGAAGAAA
Protein sequence

>Msa1332170

MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAQEISVLCDADVALIIFSTKGKLFEYSSDPCMEKILERYERCSYMERQLVTSDQSPNENWVLEHAKLKARMEVLQRNQRNFMGEDLDGLGLKELQSLEQQLDSALKQIRSRKK