AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1300220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300220 MtrunA17_Chr4g0061691 94.515 237 8 1 1 237 1 232 2.84e-164 453
Msa1300220 MtrunA17_Chr5g0420081 70.330 182 54 0 1 182 1 182 2.35e-90 266
Msa1300220 MtrunA17_Chr8g0366231 67.281 217 65 2 1 211 1 217 5.52e-90 265
Msa1300220 MtrunA17_Chr7g0220121 52.756 254 95 4 1 232 1 251 5.34e-79 238
Msa1300220 MtrunA17_Chr2g0308271 61.878 181 66 1 55 232 26 206 1.76e-69 212
Msa1300220 MtrunA17_Chr6g0455511 59.195 174 70 1 1 174 1 173 1.85e-63 198
Msa1300220 MtrunA17_Chr7g0220111 46.032 252 113 4 1 232 1 249 1.37e-60 191
Msa1300220 MtrunA17_Chr5g0420091 46.053 228 106 3 1 227 1 212 1.72e-60 189
Msa1300220 MtrunA17_Chr3g0122251 56.180 178 69 2 1 172 1 175 3.69e-59 187
Msa1300220 MtrunA17_Chr4g0061671 53.448 174 77 2 1 173 1 171 4.93e-59 184
Msa1300220 MtrunA17_Chr8g0351051 56.977 172 73 1 1 172 1 171 3.83e-58 184
Msa1300220 MtrunA17_Chr6g0474371 54.335 173 78 1 1 172 1 173 3.98e-53 170
Msa1300220 MtrunA17_Chr2g0279821 46.409 181 95 2 1 181 1 179 2.66e-49 161
Msa1300220 MtrunA17_Chr3g0097101 39.130 230 127 3 1 220 16 242 1.00e-47 157
Msa1300220 MtrunA17_Chr7g0246431 49.412 170 85 1 1 170 1 169 2.39e-47 155
Msa1300220 MtrunA17_Chr1g0204111 48.066 181 76 4 1 172 17 188 6.39e-46 153
Msa1300220 MtrunA17_Chr2g0284911 43.503 177 99 1 1 177 16 191 3.41e-45 151
Msa1300220 MtrunA17_Chr8g0380021 39.524 210 116 3 1 205 17 220 1.80e-44 149
Msa1300220 MtrunA17_Chr8g0351031 45.349 172 92 2 1 171 1 171 2.67e-44 148
Msa1300220 MtrunA17_Chr5g0411691 44.186 172 93 2 1 172 1 169 4.47e-44 148
Msa1300220 MtrunA17_Chr4g0057151 48.000 175 80 4 1 170 1 169 1.51e-42 143
Msa1300220 MtrunA17_Chr3g0077501 41.089 202 115 3 1 202 1 198 2.23e-42 143
Msa1300220 MtrunA17_Chr4g0049541 44.865 185 91 4 1 179 1 180 1.17e-41 141
Msa1300220 MtrunA17_Chr8g0351041 44.444 162 88 2 1 161 1 161 3.13e-40 135
Msa1300220 MtrunA17_Chr5g0412461 46.286 175 87 4 1 172 1 171 9.43e-38 131
Msa1300220 MtrunA17_Chr5g0412271 44.571 175 90 4 1 172 1 171 1.40e-36 128
Msa1300220 MtrunA17_Chr1g0164791 41.765 170 93 4 1 165 1 169 1.84e-36 128
Msa1300220 MtrunA17_Chr2g0308251 73.494 83 21 1 1 83 1 82 2.61e-36 123
Msa1300220 MtrunA17_Chr4g0018421 38.764 178 102 2 1 174 1 175 6.89e-35 123
Msa1300220 MtrunA17_Chr4g0020221 43.503 177 95 3 1 174 1 175 3.98e-34 123
Msa1300220 MtrunA17_Chr3g0125241 44.898 147 75 2 1 146 26 167 1.88e-33 120
Msa1300220 MtrunA17_Chr5g0427401 35.745 235 131 6 1 228 1 222 3.93e-33 119
Msa1300220 MtrunA17_Chr3g0142191 38.144 194 114 2 1 193 1 189 4.55e-31 114
Msa1300220 MtrunA17_Chr1g0159661 42.771 166 85 5 1 165 1 157 1.04e-30 112
Msa1300220 MtrunA17_Chr4g0049901 39.175 194 109 4 1 191 27 214 5.42e-30 112
Msa1300220 MtrunA17_Chr7g0246381 80.000 60 12 0 1 60 1 60 1.15e-28 103
Msa1300220 MtrunA17_Chr5g0404951 39.779 181 84 6 1 168 1 169 1.33e-28 108
Msa1300220 MtrunA17_Chr8g0377561 82.456 57 10 0 1 57 1 57 7.18e-28 102
Msa1300220 MtrunA17_Chr1g0173161 63.768 69 25 0 1 69 1 69 9.50e-25 93.6
Msa1300220 MtrunA17_Chr8g0377551 49.091 110 55 1 63 171 1 110 2.15e-23 93.2
Msa1300220 MtrunA17_Chr3g0134451 61.429 70 27 0 1 70 1 70 2.19e-22 93.2
Msa1300220 MtrunA17_Chr5g0427921 59.322 59 24 0 1 59 1 59 2.46e-20 81.6
Msa1300220 MtrunA17_Chr4g0044071 60.345 58 23 0 1 58 1 58 1.64e-19 80.9
Msa1300220 MtrunA17_Chr2g0325971 50.704 71 32 2 2 70 7 76 6.88e-19 82.4
Msa1300220 MtrunA17_Chr5g0425191 62.069 58 22 0 1 58 1 58 7.71e-19 79.0
Msa1300220 MtrunA17_Chr1g0208561 50.704 71 32 2 2 70 7 76 7.78e-19 82.0
Msa1300220 MtrunA17_Chr3g0089141 50.704 71 32 2 2 70 7 76 8.45e-19 82.0
Msa1300220 MtrunA17_Chr2g0292791 50.725 69 33 1 2 70 9 76 2.32e-18 80.9
Msa1300220 MtrunA17_Chr3g0099421 44.444 90 47 1 2 88 34 123 3.20e-18 80.9
Msa1300220 MtrunA17_Chr1g0166611 75.000 44 11 0 16 59 20 63 8.18e-18 77.0
Msa1300220 MtrunA17_Chr3g0099411 49.275 69 34 1 2 70 9 76 9.24e-18 79.0
Msa1300220 MtrunA17_Chr1g0206721 49.275 69 34 1 2 70 9 76 1.95e-17 78.6
Msa1300220 MtrunA17_Chr8g0355091 49.275 69 34 1 2 70 9 76 1.99e-17 78.6
Msa1300220 MtrunA17_Chr1g0206701 49.275 69 34 1 2 70 9 76 2.05e-17 78.6
Msa1300220 MtrunA17_Chr1g0208581 47.887 71 34 2 2 70 7 76 2.60e-17 78.2
Msa1300220 MtrunA17_Chr1g0187361 33.333 159 71 4 2 160 9 132 3.02e-17 78.2
Msa1300220 MtrunA17_Chr5g0419601 51.429 70 33 1 1 70 8 76 4.23e-17 77.4
Msa1300220 MtrunA17_Chr1g0149391 50.725 69 33 1 2 70 9 76 5.03e-17 77.4
Msa1300220 MtrunA17_Chr1g0188671 50.725 69 33 1 2 70 47 114 1.29e-16 77.0
Msa1300220 MtrunA17_Chr3g0085241 34.337 166 91 7 1 149 40 204 1.40e-16 76.3
Msa1300220 MtrunA17_Chr2g0317451 50.725 69 33 1 2 70 9 76 1.52e-16 76.3
Msa1300220 MtrunA17_Chr2g0317481 50.725 69 33 1 2 70 9 76 1.57e-16 75.9
Msa1300220 MtrunA17_Chr4g0052081 39.785 93 50 2 1 88 1 92 1.60e-16 74.7
Msa1300220 MtrunA17_Chr8g0379021 31.176 170 105 6 2 168 12 172 2.28e-16 74.3
Msa1300220 MtrunA17_Chr1g0206991 46.377 69 36 1 2 70 9 76 2.94e-16 74.3
Msa1300220 MtrunA17_Chr4g0052061 45.714 70 37 1 1 70 1 69 5.76e-16 72.8
Msa1300220 MtrunA17_Chr4g0018951 34.783 138 78 5 16 147 26 157 1.70e-15 71.6
Msa1300220 MtrunA17_Chr2g0300421 49.296 71 33 2 2 70 7 76 1.86e-15 72.0
Msa1300220 MtrunA17_Chr3g0089151 46.377 69 36 1 2 70 9 76 3.35e-15 70.1
Msa1300220 MtrunA17_Chr5g0422421 49.275 69 34 1 2 70 9 76 3.38e-15 72.4
Msa1300220 MtrunA17_Chr4g0060841 44.304 79 43 1 1 78 1 79 4.52e-15 73.6
Msa1300220 MtrunA17_Chr8g0357771 43.662 71 37 1 1 68 1 71 4.82e-15 70.9
Msa1300220 MtrunA17_Chr5g0422941 47.826 69 35 1 2 70 9 76 5.00e-15 72.0
Msa1300220 MtrunA17_Chr1g0180591 35.514 107 61 3 1 102 1 104 6.18e-15 70.5
Msa1300220 MtrunA17_Chr1g0175611 33.962 106 66 3 1 103 1 105 9.28e-15 69.7
Msa1300220 MtrunA17_Chr3g0119901 44.286 70 38 1 1 70 8 76 1.43e-14 70.1
Msa1300220 MtrunA17_Chr8g0376821 40.000 70 41 1 1 70 1 69 2.48e-14 68.9
Msa1300220 MtrunA17_Chr2g0300441 45.070 71 36 2 2 70 7 76 3.33e-14 69.7
Msa1300220 MtrunA17_Chr5g0417661 50.943 53 26 0 1 53 56 108 7.10e-14 66.2
Msa1300220 MtrunA17_Chr1g0169761 40.000 70 41 1 1 70 1 69 7.33e-14 67.8
Msa1300220 MtrunA17_Chr2g0333981 44.286 70 38 1 1 70 11 79 9.31e-14 67.4
Msa1300220 MtrunA17_Chr1g0206691 50.000 60 29 1 11 70 1 59 1.60e-13 67.4
Msa1300220 MtrunA17_Chr1g0175601 40.000 70 41 1 1 70 1 69 3.01e-13 65.9
Msa1300220 MtrunA17_Chr5g0427961 35.135 111 71 1 62 172 5 114 3.76e-13 65.5
Msa1300220 MtrunA17_Chr4g0074101 37.143 70 43 1 1 70 1 69 1.00e-12 64.7
Msa1300220 MtrunA17_Chr6g0457851 28.889 180 100 6 1 164 11 178 2.32e-12 65.5
Msa1300220 MtrunA17_Chr3g0111841 50.000 60 29 1 8 67 2 60 2.54e-12 60.5
Msa1300220 MtrunA17_Chr8g0356071 35.714 70 44 1 1 70 1 69 1.70e-11 60.8
Msa1300220 MtrunA17_Chr6g0449851 48.980 49 25 0 1 49 1 49 4.27e-11 61.6
Msa1300220 MtrunA17_Chr1g0212151 29.448 163 89 6 1 146 1 154 5.52e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300220 AT5G60910.1 65.823 237 78 1 1 234 1 237 4.75e-106 306
Msa1300220 AT1G69120.2 72.067 179 50 0 1 179 1 179 4.18e-92 271
Msa1300220 AT1G69120.1 72.067 179 50 0 1 179 1 179 2.16e-91 270
Msa1300220 AT1G26310.1 62.621 206 69 3 1 199 1 205 8.03e-86 255
Msa1300220 AT3G30260.1 49.798 247 104 4 1 231 1 243 2.33e-63 198
Msa1300220 AT5G15800.1 58.046 174 73 0 1 174 1 174 2.72e-60 190
Msa1300220 AT5G60910.2 57.143 175 72 1 63 234 1 175 3.51e-60 187
Msa1300220 AT5G15800.2 58.046 174 73 0 1 174 1 174 5.23e-60 190
Msa1300220 AT3G02310.1 45.600 250 118 5 1 232 1 250 2.07e-59 188
Msa1300220 AT3G02310.2 56.725 171 74 0 1 171 1 171 5.89e-58 182
Msa1300220 AT1G24260.2 53.591 181 73 2 1 174 1 177 2.36e-57 183
Msa1300220 AT1G24260.1 54.545 176 78 1 1 174 1 176 2.98e-57 182
Msa1300220 AT1G24260.3 56.707 164 60 2 1 157 1 160 5.15e-55 176
Msa1300220 AT2G45650.1 54.857 175 71 3 1 172 1 170 1.22e-54 176
Msa1300220 AT2G03710.1 38.462 260 130 6 1 232 1 258 9.87e-52 169
Msa1300220 AT2G03710.2 47.253 182 94 2 1 181 1 181 2.76e-51 167
Msa1300220 AT3G61120.1 49.735 189 90 3 1 188 1 185 7.95e-51 166
Msa1300220 AT2G03710.3 48.555 173 87 2 1 172 1 172 1.09e-50 164
Msa1300220 AT1G69120.3 64.103 117 42 0 63 179 1 117 7.18e-47 154
Msa1300220 AT4G09960.1 40.306 196 115 2 1 195 1 195 4.96e-44 148
Msa1300220 AT4G09960.6 40.306 196 115 2 1 195 2 196 5.75e-44 148
Msa1300220 AT4G09960.5 40.513 195 114 2 1 194 11 204 6.69e-44 148
Msa1300220 AT4G37940.1 42.697 178 100 2 1 178 1 176 1.35e-43 147
Msa1300220 AT4G09960.3 40.306 196 115 2 1 195 27 221 1.92e-43 147
Msa1300220 AT3G58780.1 37.850 214 128 2 1 214 16 224 3.16e-43 146
Msa1300220 AT3G58780.5 37.850 214 128 2 1 214 22 230 3.51e-43 146
Msa1300220 AT4G18960.1 38.942 208 119 3 2 202 18 224 5.52e-43 146
Msa1300220 AT2G14210.1 46.429 168 89 1 1 168 1 167 9.13e-43 145
Msa1300220 AT2G14210.2 46.429 168 89 1 1 168 1 167 1.14e-42 145
Msa1300220 AT2G45660.1 45.652 184 89 4 1 179 1 178 2.90e-42 143
Msa1300220 AT2G42830.1 41.714 175 101 1 1 175 16 189 1.63e-41 142
Msa1300220 AT3G58780.2 37.383 214 122 2 1 214 16 217 2.06e-41 142
Msa1300220 AT3G57230.1 42.857 175 92 3 1 172 1 170 3.18e-41 141
Msa1300220 AT3G57230.4 42.857 175 92 3 1 172 1 170 3.18e-41 141
Msa1300220 AT4G37940.4 42.690 171 96 2 1 171 1 169 4.48e-41 140
Msa1300220 AT4G09960.2 46.853 143 75 1 1 143 1 142 3.05e-40 138
Msa1300220 AT2G42830.2 41.808 177 100 2 1 175 16 191 5.11e-40 138
Msa1300220 AT4G37940.3 47.222 144 74 2 1 144 1 142 8.05e-40 135
Msa1300220 AT4G09960.4 39.500 200 115 3 1 195 96 294 8.50e-40 140
Msa1300220 AT3G58780.3 34.454 238 128 2 1 214 16 249 1.45e-39 138
Msa1300220 AT4G11880.2 47.205 161 76 2 1 157 1 156 2.21e-39 134
Msa1300220 AT4G11880.3 47.205 161 76 2 1 157 1 156 2.21e-39 134
Msa1300220 AT2G45660.2 46.951 164 76 4 1 159 1 158 2.81e-39 134
Msa1300220 AT3G57390.3 41.899 179 96 2 1 172 1 178 5.26e-39 135
Msa1300220 AT3G57390.1 41.899 179 96 2 1 172 1 178 1.12e-38 135
Msa1300220 AT4G11880.4 45.714 175 86 2 1 171 1 170 5.59e-38 132
Msa1300220 AT4G11880.1 45.714 175 86 2 1 171 1 170 5.59e-38 132
Msa1300220 AT3G57230.2 45.890 146 71 3 1 143 1 141 7.13e-38 129
Msa1300220 AT4G22950.2 43.429 175 91 3 1 172 1 170 1.03e-37 130
Msa1300220 AT5G13790.1 45.977 174 86 2 1 174 1 166 2.48e-37 132
Msa1300220 AT2G22630.1 40.223 179 103 4 1 178 1 176 4.71e-37 130
Msa1300220 AT2G22630.2 40.223 179 103 4 1 178 1 176 4.71e-37 130
Msa1300220 AT5G13790.2 45.763 177 85 3 1 174 1 169 6.13e-37 131
Msa1300220 AT4G24540.1 38.197 233 127 6 1 230 1 219 7.14e-37 129
Msa1300220 AT4G22950.3 43.678 174 90 3 1 171 1 169 1.06e-36 129
Msa1300220 AT4G22950.1 43.678 174 90 3 1 171 1 169 1.06e-36 129
Msa1300220 AT3G58780.4 32.794 247 128 3 1 214 16 257 2.35e-36 130
Msa1300220 AT5G62165.3 40.449 178 91 3 1 171 1 170 1.07e-35 126
Msa1300220 AT5G62165.1 40.449 178 91 3 1 171 1 170 1.07e-35 126
Msa1300220 AT5G62165.2 40.449 178 91 3 1 171 1 170 1.07e-35 126
Msa1300220 AT2G22540.3 41.622 185 97 4 1 182 1 177 1.50e-35 126
Msa1300220 AT2G22540.1 41.622 185 97 4 1 182 1 177 1.50e-35 126
Msa1300220 AT5G51870.1 40.000 165 91 3 1 161 1 161 3.00e-35 125
Msa1300220 AT5G51860.2 37.989 179 103 2 1 175 1 175 4.08e-35 124
Msa1300220 AT5G51870.4 38.889 180 101 4 1 175 1 176 5.39e-35 124
Msa1300220 AT5G51870.3 38.889 180 101 4 1 175 11 186 6.90e-35 124
Msa1300220 AT5G51870.2 42.384 151 79 3 1 147 1 147 1.68e-34 122
Msa1300220 AT5G23260.2 36.765 204 109 4 1 196 1 192 1.93e-34 124
Msa1300220 AT5G62165.17 40.244 164 83 3 1 157 1 156 2.49e-34 120
Msa1300220 AT5G62165.12 40.244 164 83 3 1 157 1 156 2.49e-34 120
Msa1300220 AT5G62165.11 40.244 164 83 3 1 157 1 156 2.49e-34 120
Msa1300220 AT1G71692.1 41.989 181 98 1 1 174 1 181 2.64e-34 122
Msa1300220 AT5G23260.4 36.765 204 109 4 1 196 17 208 3.14e-34 124
Msa1300220 AT5G51870.5 42.384 151 79 3 1 147 24 170 4.38e-34 121
Msa1300220 AT5G51860.1 38.922 167 94 2 1 163 1 163 4.46e-34 122
Msa1300220 AT2G22540.2 40.541 185 94 4 1 182 1 172 2.44e-33 120
Msa1300220 AT5G62165.6 39.241 158 81 3 1 151 1 150 3.68e-33 117
Msa1300220 AT5G62165.9 39.241 158 81 3 1 151 1 150 3.68e-33 117
Msa1300220 AT5G62165.7 39.241 158 81 3 1 151 1 150 3.68e-33 117
Msa1300220 AT5G62165.8 39.241 158 81 3 1 151 1 150 3.68e-33 117
Msa1300220 AT5G62165.13 39.241 158 81 3 1 151 1 150 3.68e-33 117
Msa1300220 AT5G65060.1 38.286 175 100 2 1 175 1 167 1.58e-32 117
Msa1300220 AT5G65060.3 38.372 172 98 2 1 172 1 164 2.23e-32 117
Msa1300220 AT5G62165.10 39.394 165 85 3 1 158 1 157 3.59e-32 116
Msa1300220 AT5G62165.4 39.394 165 85 3 1 158 1 157 3.59e-32 116
Msa1300220 AT5G65080.3 40.404 198 102 4 1 198 8 189 1.31e-31 115
Msa1300220 AT5G65050.2 38.150 173 97 3 1 172 1 164 2.36e-31 114
Msa1300220 AT5G65070.1 41.379 174 90 3 1 172 1 164 2.40e-31 114
Msa1300220 AT5G65050.3 38.068 176 99 3 1 175 1 167 3.50e-31 114
Msa1300220 AT5G65060.2 37.714 175 90 3 1 175 1 156 8.77e-31 112
Msa1300220 AT5G23260.1 36.275 204 105 5 1 196 17 203 1.08e-30 114
Msa1300220 AT5G20240.2 41.333 150 80 4 1 148 1 144 7.22e-30 109
Msa1300220 AT5G65050.5 37.500 176 89 3 1 175 1 156 8.63e-30 110
Msa1300220 AT5G20240.1 41.611 149 79 4 1 147 1 143 1.62e-29 110
Msa1300220 AT5G10140.4 37.580 157 90 2 1 157 1 149 1.91e-29 109
Msa1300220 AT5G10140.1 36.364 187 111 2 1 187 1 179 3.99e-29 108
Msa1300220 AT3G54340.1 36.842 171 88 3 1 163 1 159 4.86e-29 109
Msa1300220 AT5G10140.2 38.372 172 98 2 1 172 1 164 8.23e-29 107
Msa1300220 AT5G65070.2 37.949 195 98 4 1 172 1 195 1.75e-28 108
Msa1300220 AT5G10140.3 37.433 187 106 3 1 187 1 176 1.99e-28 106
Msa1300220 AT1G77080.5 39.429 175 98 3 1 175 1 167 2.37e-28 106
Msa1300220 AT5G23260.3 38.608 158 79 3 1 150 1 148 3.10e-28 107
Msa1300220 AT5G65080.2 40.488 205 105 5 1 198 8 202 7.03e-28 105
Msa1300220 AT1G77080.11 38.953 172 97 3 1 172 1 164 8.02e-28 104
Msa1300220 AT5G65050.1 38.854 157 86 3 1 156 1 148 9.08e-28 104
Msa1300220 AT1G77080.4 38.953 172 97 3 1 172 1 164 4.43e-27 103
Msa1300220 AT5G65070.4 43.448 145 70 3 1 143 1 135 1.24e-26 100
Msa1300220 AT5G65070.5 35.556 180 93 3 1 157 1 180 1.27e-25 100
Msa1300220 AT5G65070.3 35.922 206 88 5 1 172 1 196 1.60e-25 100
Msa1300220 AT5G62165.14 61.111 72 27 1 1 72 1 71 5.15e-25 95.5
Msa1300220 AT1G77080.8 35.204 196 98 5 1 172 1 191 3.99e-24 96.3
Msa1300220 AT1G77080.2 38.953 172 93 4 1 172 1 160 6.30e-24 95.1
Msa1300220 AT1G77980.1 35.437 206 118 8 1 196 1 201 8.30e-23 95.1
Msa1300220 AT1G31140.2 37.255 153 88 3 1 148 1 150 2.37e-22 91.7
Msa1300220 AT1G31140.1 36.424 151 90 3 1 148 1 148 2.39e-21 89.0
Msa1300220 AT1G77080.12 38.994 159 85 4 1 159 1 147 3.28e-20 84.0
Msa1300220 AT1G22130.1 48.864 88 43 1 1 86 1 88 6.91e-20 87.0
Msa1300220 AT1G77950.3 48.864 88 43 1 1 86 1 88 2.21e-19 84.3
Msa1300220 AT1G77950.2 48.864 88 43 1 1 86 1 88 2.21e-19 84.3
Msa1300220 AT1G77950.1 48.864 88 43 1 1 86 1 88 2.21e-19 84.3
Msa1300220 AT1G77950.4 48.864 88 43 1 1 86 1 88 2.21e-19 84.3
Msa1300220 AT1G18750.4 40.506 79 46 1 1 78 1 79 1.51e-16 78.2
Msa1300220 AT2G34440.1 35.238 105 64 3 1 105 1 101 1.52e-16 75.1
Msa1300220 AT4G37435.1 29.609 179 100 5 1 168 1 164 1.69e-16 75.1
Msa1300220 AT1G18750.1 40.506 79 46 1 1 78 1 79 1.79e-16 78.2
Msa1300220 AT1G18750.3 40.506 79 46 1 1 78 1 79 2.13e-16 77.8
Msa1300220 AT1G01530.1 46.377 69 36 1 1 69 6 73 1.34e-15 73.9
Msa1300220 AT1G65360.1 42.466 73 41 1 1 73 6 77 1.81e-15 73.2
Msa1300220 AT4G36590.1 41.892 74 42 1 2 75 7 79 9.06e-15 71.6
Msa1300220 AT2G24840.1 44.286 70 38 1 1 70 62 130 1.03e-14 72.0
Msa1300220 AT5G60440.1 43.478 69 38 1 2 70 7 74 1.90e-14 71.6
Msa1300220 AT2G03060.3 40.506 79 46 1 1 78 1 79 4.40e-14 71.2
Msa1300220 AT2G03060.7 40.506 79 46 1 1 78 1 79 4.40e-14 71.2
Msa1300220 AT2G03060.1 40.506 79 46 1 1 78 1 79 4.40e-14 71.2
Msa1300220 AT2G03060.2 40.506 79 46 1 1 78 1 79 5.63e-14 70.9
Msa1300220 AT4G37940.2 35.345 116 74 1 63 178 1 115 1.15e-13 67.0
Msa1300220 AT3G66656.1 39.437 71 42 1 1 71 1 70 2.46e-13 66.6
Msa1300220 AT2G26320.1 42.045 88 39 3 1 76 17 104 7.04e-13 63.5
Msa1300220 AT1G69540.1 38.462 78 48 0 1 78 1 78 8.18e-13 67.4
Msa1300220 AT1G47760.1 37.838 74 45 1 1 74 1 73 1.03e-12 65.1
Msa1300220 AT1G69540.2 50.943 53 26 0 1 53 1 53 1.17e-12 67.0
Msa1300220 AT3G04100.1 36.842 76 47 1 2 77 14 88 1.55e-12 65.1
Msa1300220 AT1G72350.1 42.254 71 38 1 2 72 43 110 3.71e-12 64.3
Msa1300220 AT4G18960.3 25.698 179 126 2 48 219 49 227 9.05e-12 63.2
Msa1300220 AT4G18960.2 25.698 179 126 2 48 219 49 227 9.05e-12 63.2
Msa1300220 AT1G29962.1 40.580 69 40 1 2 70 8 75 1.29e-11 62.0
Msa1300220 AT1G28460.1 39.130 69 41 1 2 70 8 75 8.67e-11 59.7

Find 55 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGCATTGTTAGGAAAAT+TGG 0.114215 8_3:+61699178 Msa1300220:intron
TTCTGCTACTATTCATTTAT+AGG 0.193739 8_3:-61702167 None:intergenic
CGAGCAAGTTGTTATGTTCT+TGG 0.265775 8_3:-61701216 None:intergenic
TATTTCAGAACTTCAGAAAA+AGG 0.269797 8_3:+61699553 Msa1300220:CDS
TGACTGAATTTCATTGTTGC+TGG 0.271959 8_3:+61702353 Msa1300220:three_prime_UTR
AGAAAACATCATTACCTTCT+TGG 0.311252 8_3:-61701239 None:intergenic
CACTAACCCTGTAGTATTCA+TGG 0.329083 8_3:-61701440 None:intergenic
TCTCAAAGAGCTTCAAAGTT+TGG 0.334932 8_3:+61699372 Msa1300220:CDS
TTCATTGCAATTCGCATGTT+GGG 0.350353 8_3:-61702090 None:intergenic
ATACGAGAGATGTTCGTATA+TGG 0.365309 8_3:+61697772 Msa1300220:CDS
CATGCATTGTTAGGAAAATT+GGG 0.366755 8_3:+61699179 Msa1300220:intron
GGAGAAGACTTGGATGGTTT+AGG 0.374421 8_3:+61699349 Msa1300220:CDS
GCTGGGCCGGCCATACTATA+TGG 0.381216 8_3:+61702371 Msa1300220:three_prime_UTR
TCCAATGGTTGAGTTTCAAT+TGG 0.387618 8_3:-61701415 None:intergenic
GACTGAATTTCATTGTTGCT+GGG 0.393774 8_3:+61702354 Msa1300220:three_prime_UTR
CGATGATATACTATATCTAT+AGG 0.401689 8_3:-61702263 None:intergenic
ATAGTATATCATCGATATAT+AGG 0.402522 8_3:+61702272 Msa1300220:three_prime_UTR
CTTCATTGCAATTCGCATGT+TGG 0.412994 8_3:-61702091 None:intergenic
GAATTTCATTGTTGCTGGGC+CGG 0.416998 8_3:+61702358 Msa1300220:three_prime_UTR
AAAACACAAATACAGCTTGT+AGG 0.421950 8_3:+61702237 Msa1300220:three_prime_UTR
TATAGCGAGACCATATAGTA+TGG 0.428706 8_3:-61702381 None:intergenic
ATCGATATATAGGCATATGA+TGG 0.438390 8_3:+61702282 Msa1300220:three_prime_UTR
AAATAGATTCATACATAACT+TGG 0.468346 8_3:-61699535 None:intergenic
GGGGAAGAGTGCAGTTGAAG+AGG 0.468420 8_3:+61696222 Msa1300220:CDS
TTGAATACTCCAGCGATCCT+TGG 0.472174 8_3:+61696378 Msa1300220:CDS
TTGGAATCCATGAATACTAC+AGG 0.477322 8_3:+61701433 Msa1300220:CDS
TCCAATTGAAACTCAACCAT+TGG 0.486216 8_3:+61701414 Msa1300220:CDS
GCAAGTTGTTATGTTCTTGG+AGG 0.493736 8_3:-61701213 None:intergenic
GCACATACACCGCAGCTCCT+TGG 0.505499 8_3:-61696008 None:intergenic
AGAGAAGGAACTTGCTCAAG+AGG 0.515552 8_3:+61701366 Msa1300220:CDS
CAAGTTGTTATGTTCTTGGA+GGG 0.519113 8_3:-61701212 None:intergenic
TAATTACACAATTACAATGC+AGG 0.526513 8_3:-61702319 None:intergenic
CGCAAAACTCAAGGCTAGGA+TGG 0.531312 8_3:+61699212 Msa1300220:CDS
AATCATCCAAGGTGGAAGAA+TGG 0.535408 8_3:-61702141 None:intergenic
ATACAAGTCTATATATATTG+AGG 0.537349 8_3:+61702405 Msa1300220:three_prime_UTR
AAGAACGTACCAAGGATCGC+TGG 0.539592 8_3:-61696387 None:intergenic
GCGAGACCATATAGTATGGC+CGG 0.548833 8_3:-61702377 None:intergenic
GTAGTATTCATGGATTCCAA+TGG 0.573152 8_3:-61701430 None:intergenic
GAAGACCTACATTTGGTGAC+TGG 0.579523 8_3:-61697817 None:intergenic
TAACAACTTGCTCGCCAAGA+AGG 0.586073 8_3:+61701225 Msa1300220:CDS
GTGGTGCCATTCTTCCACCT+TGG 0.595581 8_3:+61702135 Msa1300220:CDS
CTCTCAAACAAATTAGATCA+CGG 0.597625 8_3:+61699413 Msa1300220:CDS
TCTAGAGCACGCAAAACTCA+AGG 0.598390 8_3:+61699203 Msa1300220:CDS
AGAGATGTTCGTATATGGAA+AGG 0.602686 8_3:+61697777 Msa1300220:CDS
AGCACGCAAAACTCAAGGCT+AGG 0.604490 8_3:+61699208 Msa1300220:CDS
TCGATATATAGGCATATGAT+GGG 0.604693 8_3:+61702283 Msa1300220:three_prime_UTR
TTTATAGGACGAATCATCCA+AGG 0.606737 8_3:-61702152 None:intergenic
CAAACAAATTAGATCACGGA+AGG 0.617902 8_3:+61699417 Msa1300220:CDS
AGAGGAACTGCAAAATAGTG+TGG 0.635040 8_3:+61701384 Msa1300220:CDS
TTTATGGGAGAAGACTTGGA+TGG 0.637012 8_3:+61699343 Msa1300220:CDS
ACAGCAGCACAAACAAGATG+TGG 0.645176 8_3:+61702116 Msa1300220:CDS
AAGTGCTTCAGAGAAATCAA+AGG 0.661617 8_3:+61699235 Msa1300220:CDS
GGAACTGCAAAATAGTGTGG+AGG 0.690597 8_3:+61701387 Msa1300220:CDS
TGGAATCCATGAATACTACA+GGG 0.694406 8_3:+61701434 Msa1300220:CDS
ATAGGACGAATCATCCAAGG+TGG 0.747780 8_3:-61702149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAACTTAACTTAATAA+TGG + chr8_3:61696470-61696489 Msa1300220:intron 15.0%
!! AATAAAATATTACAGAAAAC+AGG - chr8_3:61696619-61696638 None:intergenic 15.0%
!!! ATTTTAGTATATTCAAGTAT+AGG - chr8_3:61696697-61696716 None:intergenic 15.0%
!!! AATATGTTTTAAAGATTTCA+AGG - chr8_3:61696948-61696967 None:intergenic 15.0%
!! TAACAGAATAAAAAAGAAAA+AGG + chr8_3:61697027-61697046 Msa1300220:intron 15.0%
!!! ACATTTTTTTTATCAGAAAA+CGG + chr8_3:61697159-61697178 Msa1300220:intron 15.0%
!!! TTTTTTTTTTGTTAACAGTA+TGG + chr8_3:61697733-61697752 Msa1300220:intron 15.0%
!!! CGTTTTTTAAATAATTTAAG+AGG - chr8_3:61698261-61698280 None:intergenic 15.0%
!!! AATCAATTTGCTAATTTTAA+TGG + chr8_3:61698761-61698780 Msa1300220:intron 15.0%
!!! ATCAATTTGCTAATTTTAAT+GGG + chr8_3:61698762-61698781 Msa1300220:intron 15.0%
!!! ACTTGTTTTATAGTAAAATT+AGG + chr8_3:61700990-61701009 Msa1300220:intron 15.0%
!!! CTTGTTTTATAGTAAAATTA+GGG + chr8_3:61700991-61701010 Msa1300220:intron 15.0%
!!! TGCTAATTTGAAATAATGAA+GGG - chr8_3:61696040-61696059 None:intergenic 20.0%
!!! ATGCTAATTTGAAATAATGA+AGG - chr8_3:61696041-61696060 None:intergenic 20.0%
!! TATATATAGATATAGATGTG+TGG - chr8_3:61696596-61696615 None:intergenic 20.0%
!! TAGGACAAATTAAAATTGAA+GGG - chr8_3:61696678-61696697 None:intergenic 20.0%
!! ATAGGACAAATTAAAATTGA+AGG - chr8_3:61696679-61696698 None:intergenic 20.0%
!! CTGTTTATAAATATTCATCA+TGG - chr8_3:61696802-61696821 None:intergenic 20.0%
!!! CATTTTTTTTATCAGAAAAC+GGG + chr8_3:61697160-61697179 Msa1300220:intron 20.0%
!! TTCATTTGGAAGAATTTATT+CGG - chr8_3:61697468-61697487 None:intergenic 20.0%
!!! TATTCTATTTTTGGATTGAA+AGG - chr8_3:61697919-61697938 None:intergenic 20.0%
!!! TTTACTTGGTATTCTATTTT+TGG - chr8_3:61697928-61697947 None:intergenic 20.0%
!!! TGGTTGTTAATATTTTTACT+TGG - chr8_3:61697942-61697961 None:intergenic 20.0%
!!! TTAATGTCCATACAAATTTT+AGG + chr8_3:61698023-61698042 Msa1300220:intron 20.0%
!! TTTATTACAAAACGATTTAG+GGG - chr8_3:61698294-61698313 None:intergenic 20.0%
!! GTTTATTACAAAACGATTTA+GGG - chr8_3:61698295-61698314 None:intergenic 20.0%
!! TGTTTATTACAAAACGATTT+AGG - chr8_3:61698296-61698315 None:intergenic 20.0%
!! AACATAACATAGATAGAATT+TGG - chr8_3:61698536-61698555 None:intergenic 20.0%
!! ATCTATGTTATGTTAATACT+CGG + chr8_3:61698542-61698561 Msa1300220:intron 20.0%
!! TTGTTGAATATGCAATATTA+AGG + chr8_3:61698887-61698906 Msa1300220:intron 20.0%
!! TACATTAGATTAATTGAAAC+TGG + chr8_3:61699127-61699146 Msa1300220:intron 20.0%
!! GGAATAAAATTAATATGCAA+TGG + chr8_3:61699299-61699318 Msa1300220:intron 20.0%
!! TGAATTATACTCACTTAATT+TGG + chr8_3:61699498-61699517 Msa1300220:intron 20.0%
!! AAATAGATTCATACATAACT+TGG - chr8_3:61699538-61699557 None:intergenic 20.0%
!! AACATAACAAGCTTAAAATT+TGG + chr8_3:61699804-61699823 Msa1300220:intron 20.0%
!!! TTTAGTGAGAATCAATTTTA+CGG + chr8_3:61700936-61700955 Msa1300220:intron 20.0%
!! TACTATAAAACAAGTATGTT+TGG - chr8_3:61700985-61701004 None:intergenic 20.0%
!! ATATTATTACATAAAAGTGG+AGG - chr8_3:61701089-61701108 None:intergenic 20.0%
!! CACATATTATTACATAAAAG+TGG - chr8_3:61701092-61701111 None:intergenic 20.0%
!! GATAGTCATACATTATAATT+TGG + chr8_3:61701146-61701165 Msa1300220:intron 20.0%
!! TGATGTATAATTGAATTCAA+AGG + chr8_3:61701472-61701491 Msa1300220:intron 20.0%
!! TCAAAAAAATAGTACACATT+AGG - chr8_3:61701563-61701582 None:intergenic 20.0%
!!! TGTGTACTATTTTTTTGATT+TGG + chr8_3:61701565-61701584 Msa1300220:intron 20.0%
!! AAAAACAACCTAAAAATTGT+TGG + chr8_3:61701755-61701774 Msa1300220:intron 20.0%
!! AATCTAATATATTTGAGCAT+AGG - chr8_3:61701819-61701838 None:intergenic 20.0%
!! TTATAAATAGAGCTAATTAG+AGG - chr8_3:61701857-61701876 None:intergenic 20.0%
!! TAAAATATGCATAGTTATTG+AGG - chr8_3:61701919-61701938 None:intergenic 20.0%
!! AATTGAACTATATTAAGACA+TGG - chr8_3:61702000-61702019 None:intergenic 20.0%
!! TATATGTTGCATATTCAAAT+AGG - chr8_3:61702023-61702042 None:intergenic 20.0%
!! ATAGTATATCATCGATATAT+AGG + chr8_3:61702272-61702291 Msa1300220:three_prime_UTR 20.0%
! ATAAAACGAAAAAAGAACCA+AGG + chr8_3:61695991-61696010 Msa1300220:five_prime_UTR 25.0%
!! CTCATTATTTTCTCTACTAA+AGG + chr8_3:61696347-61696366 Msa1300220:CDS 25.0%
! TACACAGAAATTATGATGTT+TGG - chr8_3:61696526-61696545 None:intergenic 25.0%
!! TCAATTTTTCTTCCATTGTA+CGG + chr8_3:61696646-61696665 Msa1300220:intron 25.0%
!!! ATTGATTTGTTTAAAGTTGC+TGG + chr8_3:61696825-61696844 Msa1300220:intron 25.0%
!!! ATCTAGTTTTCTTCTCTTAT+AGG - chr8_3:61696914-61696933 None:intergenic 25.0%
!!! ATGTTTTAAAGATTTCAAGG+TGG - chr8_3:61696945-61696964 None:intergenic 25.0%
! TCTCAATAAGAATGAGTTTA+GGG - chr8_3:61697362-61697381 None:intergenic 25.0%
!! TAAACAACAACTTTAGTTCA+TGG + chr8_3:61697427-61697446 Msa1300220:intron 25.0%
! GTGATATACTTGAATTAACT+AGG - chr8_3:61697608-61697627 None:intergenic 25.0%
!!! CTTAATTGGTTTGGTTTTTT+TGG + chr8_3:61697875-61697894 Msa1300220:intron 25.0%
! CATTACTCCTAAAATTTGTA+TGG - chr8_3:61698033-61698052 None:intergenic 25.0%
!!! TAAAATTTTGAGGGTTGAAA+TGG - chr8_3:61698057-61698076 None:intergenic 25.0%
!! TTTCAACCCTCAAAATTTTA+AGG + chr8_3:61698057-61698076 Msa1300220:intron 25.0%
!! TTCAACCCTCAAAATTTTAA+GGG + chr8_3:61698058-61698077 Msa1300220:intron 25.0%
!!! TTCTTAGTGTCAATTTTGAT+GGG - chr8_3:61698136-61698155 None:intergenic 25.0%
! TTATTACAAAACGATTTAGG+GGG - chr8_3:61698293-61698312 None:intergenic 25.0%
!! GATCAACATATTAACTTGAA+TGG + chr8_3:61698335-61698354 Msa1300220:intron 25.0%
!! TTTTGGTCCTAAAATTGAAA+GGG - chr8_3:61698501-61698520 None:intergenic 25.0%
!!! ATTTTGGTCCTAAAATTGAA+AGG - chr8_3:61698502-61698521 None:intergenic 25.0%
!!! TTTGGAGTAAATCAACATTT+TGG - chr8_3:61698518-61698537 None:intergenic 25.0%
!!! ATATTTTAATTGAAGAGACG+AGG + chr8_3:61698805-61698824 Msa1300220:intron 25.0%
! GTAAATATAAGCAAAGAGTT+TGG - chr8_3:61699062-61699081 None:intergenic 25.0%
!!! AGCAAAGATAATTTTGTTTC+AGG + chr8_3:61699278-61699297 Msa1300220:intron 25.0%
!!! CTTTGTTTCAGGAATTTTAT+GGG + chr8_3:61699328-61699347 Msa1300220:intron 25.0%
! TATTTCAGAACTTCAGAAAA+AGG + chr8_3:61699553-61699572 Msa1300220:CDS 25.0%
!!! AGCTTGTTATGTTAATTTGA+TGG - chr8_3:61699797-61699816 None:intergenic 25.0%
! AATACAATCTGATTAAAGCT+CGG + chr8_3:61699887-61699906 Msa1300220:intron 25.0%
! TTGAACCATTTGATAAAGAT+CGG + chr8_3:61699961-61699980 Msa1300220:intron 25.0%
! ATGCAATTTCTTGATGTTAT+CGG + chr8_3:61700184-61700203 Msa1300220:intron 25.0%
!!! ATTTTTTTGAGAAGTCAACT+TGG + chr8_3:61700410-61700429 Msa1300220:intron 25.0%
!!! ATTTTTTTGAGAAGTCAACT+TGG + chr8_3:61700410-61700429 Msa1300220:intron 25.0%
!!! AGAATCAGTTCTAAAATCAA+AGG - chr8_3:61700841-61700860 None:intergenic 25.0%
!! AATTTTACGGAATCAATTCT+TGG + chr8_3:61700949-61700968 Msa1300220:intron 25.0%
! GAGAGAGAATAAAATATTGT+AGG - chr8_3:61701681-61701700 None:intergenic 25.0%
!! AGAGCATTAAATCTCTTATA+GGG - chr8_3:61701785-61701804 None:intergenic 25.0%
! TTCTGCTACTATTCATTTAT+AGG - chr8_3:61702170-61702189 None:intergenic 25.0%
!!! GTGTTTTGAATAAAGAAAAG+TGG - chr8_3:61702224-61702243 None:intergenic 25.0%
! CGATGATATACTATATCTAT+AGG - chr8_3:61702266-61702285 None:intergenic 25.0%
! TAATTACACAATTACAATGC+AGG - chr8_3:61702322-61702341 None:intergenic 25.0%
ATTCCAATTCCAACCAAAAA+TGG + chr8_3:61696196-61696215 Msa1300220:exon 30.0%
TTCCAATTCCAACCAAAAAT+GGG + chr8_3:61696197-61696216 Msa1300220:exon 30.0%
!!! AAGTCACTTTTTCAAAGAGA+AGG + chr8_3:61696267-61696286 Msa1300220:CDS 30.0%
! ATTTGTTTAAAGTTGCTGGT+TGG + chr8_3:61696829-61696848 Msa1300220:intron 30.0%
! TAGTTTTCTTCTCTTATAGG+AGG - chr8_3:61696911-61696930 None:intergenic 30.0%
GATTATTGATGCCATGAAAA+GGG - chr8_3:61697335-61697354 None:intergenic 30.0%
TGATTATTGATGCCATGAAA+AGG - chr8_3:61697336-61697355 None:intergenic 30.0%
GTCTCAATAAGAATGAGTTT+AGG - chr8_3:61697363-61697382 None:intergenic 30.0%
TCCATAACCATGAACTAATA+GGG - chr8_3:61697406-61697425 None:intergenic 30.0%
TTCCATAACCATGAACTAAT+AGG - chr8_3:61697407-61697426 None:intergenic 30.0%
! ACAACTTTAGTTCATGGTTA+TGG + chr8_3:61697433-61697452 Msa1300220:intron 30.0%
GTATTTGATCCTATACTGAA+GGG - chr8_3:61697553-61697572 None:intergenic 30.0%
CTTCAGTATAGGATCAAATA+CGG + chr8_3:61697552-61697571 Msa1300220:intron 30.0%
! TGTGCAGTTTTTCTGATTTT+AGG + chr8_3:61697650-61697669 Msa1300220:intron 30.0%
AATTAAGAAAACCAAGCTCA+AGG - chr8_3:61697862-61697881 None:intergenic 30.0%
!! TTGAGCTTGGTTTTCTTAAT+TGG + chr8_3:61697861-61697880 Msa1300220:intron 30.0%
!! CTTGGTTTTCTTAATTGGTT+TGG + chr8_3:61697866-61697885 Msa1300220:intron 30.0%
TTGAAAGGACATTCATTGAA+GGG - chr8_3:61697904-61697923 None:intergenic 30.0%
ATTGAAAGGACATTCATTGA+AGG - chr8_3:61697905-61697924 None:intergenic 30.0%
! TAGAACTAGACTCTTTCTTT+TGG - chr8_3:61697962-61697981 None:intergenic 30.0%
! TGACACCCTTAAAATTTTGA+GGG - chr8_3:61698066-61698085 None:intergenic 30.0%
! TTGACACCCTTAAAATTTTG+AGG - chr8_3:61698067-61698086 None:intergenic 30.0%
! CTTCTTAGTGTCAATTTTGA+TGG - chr8_3:61698137-61698156 None:intergenic 30.0%
TATGCTTCTCTTAAGATTTC+AGG - chr8_3:61698167-61698186 None:intergenic 30.0%
TATTACAAAACGATTTAGGG+GGG - chr8_3:61698292-61698311 None:intergenic 30.0%
! ACATCGAACATTTAAAATCG+TGG + chr8_3:61698382-61698401 Msa1300220:intron 30.0%
!! TTGATGACCCTTTCAATTTT+AGG + chr8_3:61698491-61698510 Msa1300220:intron 30.0%
TAACCAAAGAGACAATACAA+CGG + chr8_3:61698933-61698952 Msa1300220:intron 30.0%
TAAGCAAAGAGTTTGGATTT+GGG - chr8_3:61699055-61699074 None:intergenic 30.0%
ATAAGCAAAGAGTTTGGATT+TGG - chr8_3:61699056-61699075 None:intergenic 30.0%
TAGAGTACAGATTGTAACTT+TGG + chr8_3:61699097-61699116 Msa1300220:intron 30.0%
CATGCATTGTTAGGAAAATT+GGG + chr8_3:61699179-61699198 Msa1300220:intron 30.0%
!!! GCTTTGTTTCAGGAATTTTA+TGG + chr8_3:61699327-61699346 Msa1300220:intron 30.0%
CTCTCAAACAAATTAGATCA+CGG + chr8_3:61699413-61699432 Msa1300220:CDS 30.0%
! TGCTACATTGAGAATACTTT+TGG + chr8_3:61699453-61699472 Msa1300220:intron 30.0%
TTCTCTTTCCCTTGAAAAAA+TGG + chr8_3:61699660-61699679 Msa1300220:intron 30.0%
!!! CTTTTGCACCATTTTTTCAA+GGG - chr8_3:61699671-61699690 None:intergenic 30.0%
!!! TCTTTTGCACCATTTTTTCA+AGG - chr8_3:61699672-61699691 None:intergenic 30.0%
AAAAAATGGTGCAAAAGATG+TGG + chr8_3:61699674-61699693 Msa1300220:intron 30.0%
! TAGGGATTTTGCAATCAATT+TGG + chr8_3:61699708-61699727 Msa1300220:intron 30.0%
! AGGGATTTTGCAATCAATTT+GGG + chr8_3:61699709-61699728 Msa1300220:intron 30.0%
ACAATCCGATCTTTATCAAA+TGG - chr8_3:61699969-61699988 None:intergenic 30.0%
GTCAATTTAATCACGCATTT+AGG - chr8_3:61700001-61700020 None:intergenic 30.0%
TGCAATTTCTTGATGTTATC+GGG + chr8_3:61700185-61700204 Msa1300220:intron 30.0%
GTTATCGGGATAATATATGT+CGG + chr8_3:61700199-61700218 Msa1300220:intron 30.0%
ATTATCCGATCTTTACCAAA+TGG + chr8_3:61700296-61700315 Msa1300220:intron 30.0%
! GACACTTATAAAGCTTTTGA+TGG - chr8_3:61700329-61700348 None:intergenic 30.0%
ATAAAGGAAATGGCTACAAT+CGG - chr8_3:61700611-61700630 None:intergenic 30.0%
TAGGCTTAAATCCTAACAAT+TGG - chr8_3:61700700-61700719 None:intergenic 30.0%
!! TCTTAATGGACTAGTCATTT+GGG - chr8_3:61700737-61700756 None:intergenic 30.0%
! AAATGACTAGTCCATTAAGA+GGG + chr8_3:61700737-61700756 Msa1300220:intron 30.0%
AATATTGACCAAACACACAT+TGG + chr8_3:61701124-61701143 Msa1300220:intron 30.0%
CTGCATGATATAGAAGAAAA+GGG - chr8_3:61701185-61701204 None:intergenic 30.0%
AGAAAACATCATTACCTTCT+TGG - chr8_3:61701242-61701261 None:intergenic 30.0%
TTGGATACTCTTATATTCAC+TGG + chr8_3:61701584-61701603 Msa1300220:intron 30.0%
TGCAGAAAAATTGAATGTAG+TGG - chr8_3:61701610-61701629 None:intergenic 30.0%
CTACATTTGCACTATCATTA+GGG + chr8_3:61701635-61701654 Msa1300220:intron 30.0%
!! TGTGCTATTAATTTGTCACA+TGG + chr8_3:61701731-61701750 Msa1300220:intron 30.0%
AGCATTAAATCTCTTATAGG+GGG - chr8_3:61701783-61701802 None:intergenic 30.0%
GAGCATTAAATCTCTTATAG+GGG - chr8_3:61701784-61701803 None:intergenic 30.0%
!! GAGAGCATTAAATCTCTTAT+AGG - chr8_3:61701786-61701805 None:intergenic 30.0%
AAAACACAAATACAGCTTGT+AGG + chr8_3:61702237-61702256 Msa1300220:three_prime_UTR 30.0%
ATCGATATATAGGCATATGA+TGG + chr8_3:61702282-61702301 Msa1300220:three_prime_UTR 30.0%
TCGATATATAGGCATATGAT+GGG + chr8_3:61702283-61702302 Msa1300220:three_prime_UTR 30.0%
CTAGCTATCACAACATGAAT+TGG - chr8_3:61696164-61696183 None:intergenic 35.0%
TCCAATTCCAACCAAAAATG+GGG + chr8_3:61696198-61696217 Msa1300220:exon 35.0%
!!! ACTTTTTCAAAGAGAAGGTC+TGG + chr8_3:61696272-61696291 Msa1300220:CDS 35.0%
GAAAGAAAAAGAACGTACCA+AGG - chr8_3:61696398-61696417 None:intergenic 35.0%
CTTAATAATGGTTTCTCTCC+TGG + chr8_3:61696482-61696501 Msa1300220:intron 35.0%
ATTTAGATGCATGATGTACC+AGG - chr8_3:61696503-61696522 None:intergenic 35.0%
!! GACATGCTAATTTTAGTCTG+TGG + chr8_3:61697109-61697128 Msa1300220:intron 35.0%
!! TCTACGTGTGTTGATTTGAT+TGG - chr8_3:61697259-61697278 None:intergenic 35.0%
! CATTCTTTACACCCTTTTCA+TGG + chr8_3:61697321-61697340 Msa1300220:intron 35.0%
TAACCATGAACTAATAGGGT+TGG - chr8_3:61697402-61697421 None:intergenic 35.0%
ACCCTATTAGTTCATGGTTA+TGG + chr8_3:61697402-61697421 Msa1300220:intron 35.0%
AGTTCATGGTTATGGAAGAA+AGG + chr8_3:61697441-61697460 Msa1300220:intron 35.0%
TGGTTTACATGGTGTTCATT+TGG - chr8_3:61697482-61697501 None:intergenic 35.0%
AAATGAACACCATGTAAACC+AGG + chr8_3:61697481-61697500 Msa1300220:intron 35.0%
ACATTTGTTCCTGGTTTACA+TGG - chr8_3:61697493-61697512 None:intergenic 35.0%
CTTTATGCAACATTTGTTCC+TGG - chr8_3:61697502-61697521 None:intergenic 35.0%
CGTATTTGATCCTATACTGA+AGG - chr8_3:61697554-61697573 None:intergenic 35.0%
CAGAAAAACTGCACATTTGA+AGG - chr8_3:61697645-61697664 None:intergenic 35.0%
ATACGAGAGATGTTCGTATA+TGG + chr8_3:61697772-61697791 Msa1300220:CDS 35.0%
AGAGATGTTCGTATATGGAA+AGG + chr8_3:61697777-61697796 Msa1300220:CDS 35.0%
!!! TCAATTTTGATGGGCTAGTT+TGG - chr8_3:61698127-61698146 None:intergenic 35.0%
!!! GGACTATTTGTTTTAGACCT+TGG - chr8_3:61698192-61698211 None:intergenic 35.0%
!! TTAGATTGGTCTTGTGGTAT+TGG - chr8_3:61698213-61698232 None:intergenic 35.0%
TTTCATTGACCCAGTTAGAT+TGG - chr8_3:61698227-61698246 None:intergenic 35.0%
GTTTACCTATGATACCTCAA+GGG - chr8_3:61698597-61698616 None:intergenic 35.0%
ATACGTCATCGATAGAGAAT+TGG - chr8_3:61698847-61698866 None:intergenic 35.0%
TGTATTGTCTCTTTGGTTAG+CGG - chr8_3:61698932-61698951 None:intergenic 35.0%
! AAATTTAGGTGTTACGCGTA+TGG - chr8_3:61698964-61698983 None:intergenic 35.0%
GCATGCATTGTTAGGAAAAT+TGG + chr8_3:61699178-61699197 Msa1300220:intron 35.0%
AAGTGCTTCAGAGAAATCAA+AGG + chr8_3:61699235-61699254 Msa1300220:CDS 35.0%
! GAATTTTATGGGAGAAGACT+TGG + chr8_3:61699339-61699358 Msa1300220:CDS 35.0%
TCTCAAAGAGCTTCAAAGTT+TGG + chr8_3:61699372-61699391 Msa1300220:CDS 35.0%
CAAACAAATTAGATCACGGA+AGG + chr8_3:61699417-61699436 Msa1300220:CDS 35.0%
!!! TGAGAATACTTTTGGTGATG+TGG + chr8_3:61699461-61699480 Msa1300220:intron 35.0%
TGCATGTGTATACAAACGAT+AGG + chr8_3:61699617-61699636 Msa1300220:intron 35.0%
GCATGTGTATACAAACGATA+GGG + chr8_3:61699618-61699637 Msa1300220:intron 35.0%
AATGTCGAAAAGTGATCAGA+CGG + chr8_3:61699756-61699775 Msa1300220:intron 35.0%
TCAAGTTTCTCTAGTAGTGT+AGG - chr8_3:61699854-61699873 None:intergenic 35.0%
CTCAACCATTTGGTAAAGAT+CGG - chr8_3:61700304-61700323 None:intergenic 35.0%
! TTTGATGGATCTCAACCATT+TGG - chr8_3:61700314-61700333 None:intergenic 35.0%
!! TTTTTGAGAAGTCAACTTGG+TGG + chr8_3:61700413-61700432 Msa1300220:intron 35.0%
AATGTCAAACATAAGTCGTG+AGG - chr8_3:61700444-61700463 None:intergenic 35.0%
!! TTTTTGAGAAGTCAACTTGG+TGG + chr8_3:61700413-61700432 Msa1300220:intron 35.0%
! GTAGATTAAAGTGCTTGATG+TGG - chr8_3:61700511-61700530 None:intergenic 35.0%
CACTTTAATCTACACGATGT+GGG + chr8_3:61700518-61700537 Msa1300220:intron 35.0%
TAAAGGAAATGGCTACAATC+GGG - chr8_3:61700610-61700629 None:intergenic 35.0%
!! CAATGAAAGCACCAATTGTT+AGG + chr8_3:61700686-61700705 Msa1300220:intron 35.0%
TGTTAGGATTTAAGCCTATG+AGG + chr8_3:61700702-61700721 Msa1300220:intron 35.0%
!! CTCTTAATGGACTAGTCATT+TGG - chr8_3:61700738-61700757 None:intergenic 35.0%
! CAAATGACTAGTCCATTAAG+AGG + chr8_3:61700736-61700755 Msa1300220:intron 35.0%
! ATCGAGTAGATTAAAGTGCT+TGG - chr8_3:61700773-61700792 None:intergenic 35.0%
TTAGTACCCAAAATTGTGGT+AGG - chr8_3:61700804-61700823 None:intergenic 35.0%
! GCTTTTAGTACCCAAAATTG+TGG - chr8_3:61700808-61700827 None:intergenic 35.0%
AGTTGAAGGTAGAGTGATTT+GGG - chr8_3:61700912-61700931 None:intergenic 35.0%
! TCTCACTAAAAGTGAGTTGA+AGG - chr8_3:61700926-61700945 None:intergenic 35.0%
GTAAAATTAGGGACGAACAT+TGG + chr8_3:61701002-61701021 Msa1300220:intron 35.0%
ATGACTATCCAATGTGTGTT+TGG - chr8_3:61701135-61701154 None:intergenic 35.0%
CCTGCATGATATAGAAGAAA+AGG - chr8_3:61701186-61701205 None:intergenic 35.0%
! CCTTTTCTTCTATATCATGC+AGG + chr8_3:61701183-61701202 Msa1300220:intron 35.0%
CTTCTATATCATGCAGGATA+AGG + chr8_3:61701189-61701208 Msa1300220:intron 35.0%
CAAGTTGTTATGTTCTTGGA+GGG - chr8_3:61701215-61701234 None:intergenic 35.0%
TTTAACAACTATGCCGAATG+TGG + chr8_3:61701272-61701291 Msa1300220:intron 35.0%
! TCTCTTTTTCCTTTATCTGC+AGG - chr8_3:61701351-61701370 None:intergenic 35.0%
GCAGATAAAGGAAAAAGAGA+AGG + chr8_3:61701351-61701370 Msa1300220:intron 35.0%
TCCAATTGAAACTCAACCAT+TGG + chr8_3:61701414-61701433 Msa1300220:CDS 35.0%
TCCAATGGTTGAGTTTCAAT+TGG - chr8_3:61701418-61701437 None:intergenic 35.0%
GTAGTATTCATGGATTCCAA+TGG - chr8_3:61701433-61701452 None:intergenic 35.0%
TTGGAATCCATGAATACTAC+AGG + chr8_3:61701433-61701452 Msa1300220:CDS 35.0%
TGGAATCCATGAATACTACA+GGG + chr8_3:61701434-61701453 Msa1300220:CDS 35.0%
AGATGCATATGCACTATACA+CGG - chr8_3:61701513-61701532 None:intergenic 35.0%
! CCTAATGATAGTGCAAATGT+AGG - chr8_3:61701637-61701656 None:intergenic 35.0%
CCTACATTTGCACTATCATT+AGG + chr8_3:61701634-61701653 Msa1300220:intron 35.0%
! GCAAAGCGTTTATCTCTTAT+AGG - chr8_3:61701705-61701724 None:intergenic 35.0%
!! CAAGATTTTGGCATTTGGAA+TGG - chr8_3:61701881-61701900 None:intergenic 35.0%
CATTCCAAATGCCAAAATCT+TGG + chr8_3:61701879-61701898 Msa1300220:intron 35.0%
TTCATTGCAATTCGCATGTT+GGG - chr8_3:61702093-61702112 None:intergenic 35.0%
TTTATAGGACGAATCATCCA+AGG - chr8_3:61702155-61702174 None:intergenic 35.0%
TGACTGAATTTCATTGTTGC+TGG + chr8_3:61702353-61702372 Msa1300220:three_prime_UTR 35.0%
GACTGAATTTCATTGTTGCT+GGG + chr8_3:61702354-61702373 Msa1300220:three_prime_UTR 35.0%
TATAGCGAGACCATATAGTA+TGG - chr8_3:61702384-61702403 None:intergenic 35.0%
AAAAAAGAACCAAGGAGCTG+CGG + chr8_3:61695999-61696018 Msa1300220:five_prime_UTR 40.0%
ACATGAATTGGAGGAGAGTT+AGG - chr8_3:61696152-61696171 None:intergenic 40.0%
GCTATCACAACATGAATTGG+AGG - chr8_3:61696161-61696180 None:intergenic 40.0%
!!! TCCCCATTTTTGGTTGGAAT+TGG - chr8_3:61696202-61696221 None:intergenic 40.0%
AATTCCAACCAAAAATGGGG+AGG + chr8_3:61696201-61696220 Msa1300220:exon 40.0%
ATTCCAACCAAAAATGGGGA+GGG + chr8_3:61696202-61696221 Msa1300220:exon 40.0%
GAAGGGAAAATACCGTACAA+TGG - chr8_3:61696661-61696680 None:intergenic 40.0%
! GAGGAATCTAGTGGACAATT+GGG - chr8_3:61696886-61696905 None:intergenic 40.0%
! AGAGGAATCTAGTGGACAAT+TGG - chr8_3:61696887-61696906 None:intergenic 40.0%
TCTTCTCTTATAGGAGGAAG+AGG - chr8_3:61696905-61696924 None:intergenic 40.0%
CTTCCAACCCTATTAGTTCA+TGG + chr8_3:61697396-61697415 Msa1300220:intron 40.0%
AGGGAAGCTTTCATTGTCAT+GGG - chr8_3:61697534-61697553 None:intergenic 40.0%
AAGGGAAGCTTTCATTGTCA+TGG - chr8_3:61697535-61697554 None:intergenic 40.0%
TGAAAGCTTCCCTTCAGTAT+AGG + chr8_3:61697541-61697560 Msa1300220:intron 40.0%
GATTACATGCATGCATCTTC+AGG - chr8_3:61697679-61697698 None:intergenic 40.0%
AGGAGATGAAGACCTACATT+TGG - chr8_3:61697827-61697846 None:intergenic 40.0%
ATCTCAATGAACCTTGAGCT+TGG + chr8_3:61697848-61697867 Msa1300220:intron 40.0%
! CTTAAGAGAAGCATACTCCA+AGG + chr8_3:61698172-61698191 Msa1300220:intron 40.0%
TACCACAAGACCAATCTAAC+TGG + chr8_3:61698214-61698233 Msa1300220:intron 40.0%
ACCACAAGACCAATCTAACT+GGG + chr8_3:61698215-61698234 Msa1300220:intron 40.0%
TCTCTTTCTCAAATCCCTTG+AGG + chr8_3:61698580-61698599 Msa1300220:intron 40.0%
! CAAATCCCTTGAGGTATCAT+AGG + chr8_3:61698589-61698608 Msa1300220:intron 40.0%
GGTTTACCTATGATACCTCA+AGG - chr8_3:61698598-61698617 None:intergenic 40.0%
!! AATGGCAACTGCTTTGTTTC+AGG + chr8_3:61699317-61699336 Msa1300220:intron 40.0%
TTTATGGGAGAAGACTTGGA+TGG + chr8_3:61699343-61699362 Msa1300220:CDS 40.0%
AGATGTGGTAGATGGTTTCT+AGG + chr8_3:61699689-61699708 Msa1300220:intron 40.0%
GATGTGGTAGATGGTTTCTA+GGG + chr8_3:61699690-61699709 Msa1300220:intron 40.0%
ATGTCGAAAAGTGATCAGAC+GGG + chr8_3:61699757-61699776 Msa1300220:intron 40.0%
GCGTGATTAAATTGACTGCT+AGG + chr8_3:61700005-61700024 Msa1300220:intron 40.0%
CCAACTTCATTAGCTCGATT+CGG + chr8_3:61700031-61700050 Msa1300220:intron 40.0%
! AGCTCGGGATAATTTTCATC+GGG - chr8_3:61700086-61700105 None:intergenic 40.0%
! CAGCTCGGGATAATTTTCAT+CGG - chr8_3:61700087-61700106 None:intergenic 40.0%
! GGAGGGTGTGGTTATAATTT+AGG + chr8_3:61700157-61700176 Msa1300220:intron 40.0%
TCAACTTCGTTAGCTCGATT+AGG + chr8_3:61700257-61700276 Msa1300220:intron 40.0%
GATGTGGTATTTAAGTCGTG+AGG - chr8_3:61700495-61700514 None:intergenic 40.0%
GCACTTTAATCTACACGATG+TGG + chr8_3:61700517-61700536 Msa1300220:intron 40.0%
TGAAGCGGTCATAAAGGAAA+TGG - chr8_3:61700621-61700640 None:intergenic 40.0%
! AATTCGTGTAGCCCTTTTTG+TGG + chr8_3:61700654-61700673 Msa1300220:intron 40.0%
TGAGAGTTGGACCACAAAAA+GGG - chr8_3:61700668-61700687 None:intergenic 40.0%
TTGAGAGTTGGACCACAAAA+AGG - chr8_3:61700669-61700688 None:intergenic 40.0%
! TTGGTGCTTTCATTGAGAGT+TGG - chr8_3:61700681-61700700 None:intergenic 40.0%
! GTAGATTAAAGTGCTTGGTG+TGG - chr8_3:61700768-61700787 None:intergenic 40.0%
! TGAGACTCCTACCACAATTT+TGG + chr8_3:61700794-61700813 Msa1300220:intron 40.0%
! GAGACTCCTACCACAATTTT+GGG + chr8_3:61700795-61700814 Msa1300220:intron 40.0%
! AAGGTAGAGTGATTTGGGTT+TGG - chr8_3:61700907-61700926 None:intergenic 40.0%
GAGTTGAAGGTAGAGTGATT+TGG - chr8_3:61700913-61700932 None:intergenic 40.0%
GCAAGTTGTTATGTTCTTGG+AGG - chr8_3:61701216-61701235 None:intergenic 40.0%
CGAGCAAGTTGTTATGTTCT+TGG - chr8_3:61701219-61701238 None:intergenic 40.0%
CCAAATCCAAACACCACATT+CGG - chr8_3:61701288-61701307 None:intergenic 40.0%
GAGTGAAAACCTGCAGATAA+AGG + chr8_3:61701339-61701358 Msa1300220:intron 40.0%
AGAGGAACTGCAAAATAGTG+TGG + chr8_3:61701384-61701403 Msa1300220:CDS 40.0%
CACTAACCCTGTAGTATTCA+TGG - chr8_3:61701443-61701462 None:intergenic 40.0%
!!! AGGGGGTACCAACAATTTTT+AGG - chr8_3:61701766-61701785 None:intergenic 40.0%
TCCAAATGCCAAAATCTTGG+TGG + chr8_3:61701882-61701901 Msa1300220:intron 40.0%
! GTTACAAGCCACCAAGATTT+TGG - chr8_3:61701893-61701912 None:intergenic 40.0%
!! TTACTGAGTTGATGCAGATC+TGG + chr8_3:61702065-61702084 Msa1300220:intron 40.0%
!! TACTGAGTTGATGCAGATCT+GGG + chr8_3:61702066-61702085 Msa1300220:intron 40.0%
CTTCATTGCAATTCGCATGT+TGG - chr8_3:61702094-61702113 None:intergenic 40.0%
AATCATCCAAGGTGGAAGAA+TGG - chr8_3:61702144-61702163 None:intergenic 40.0%
GAATTGGAGGAGAGTTAGGT+AGG - chr8_3:61696148-61696167 None:intergenic 45.0%
TTCCAACCAAAAATGGGGAG+GGG + chr8_3:61696203-61696222 Msa1300220:exon 45.0%
TTGAATACTCCAGCGATCCT+TGG + chr8_3:61696378-61696397 Msa1300220:CDS 45.0%
TAGGAGGAAGAGGAATCTAG+TGG - chr8_3:61696895-61696914 None:intergenic 45.0%
TGACCGATCAAGTGTGTCAA+CGG + chr8_3:61697073-61697092 Msa1300220:intron 45.0%
GGGAAGCTTTCATTGTCATG+GGG - chr8_3:61697533-61697552 None:intergenic 45.0%
AGTGACCAGTCACCAAATGT+AGG + chr8_3:61697812-61697831 Msa1300220:intron 45.0%
! GAAGACCTACATTTGGTGAC+TGG - chr8_3:61697820-61697839 None:intergenic 45.0%
GCTCAAGGTTCATTGAGATG+AGG - chr8_3:61697847-61697866 None:intergenic 45.0%
!! ACCCAGTTAGATTGGTCTTG+TGG - chr8_3:61698219-61698238 None:intergenic 45.0%
TACAAAACGATTTAGGGGGG+AGG - chr8_3:61698289-61698308 None:intergenic 45.0%
GGTAAACCACTCATGTTACG+TGG + chr8_3:61698610-61698629 Msa1300220:intron 45.0%
AAACCACTCATGTTACGTGG+TGG + chr8_3:61698613-61698632 Msa1300220:intron 45.0%
TTTCCACCACGTAACATGAG+TGG - chr8_3:61698619-61698638 None:intergenic 45.0%
!! GTTAGCGGATTGTGTTGTAC+AGG - chr8_3:61698917-61698936 None:intergenic 45.0%
GCACCGTTGTATTGTCTCTT+TGG - chr8_3:61698939-61698958 None:intergenic 45.0%
! TTTAGGTGTTACGCGTATGG+TGG - chr8_3:61698961-61698980 None:intergenic 45.0%
GCATGCATGCATGCATTGTT+AGG + chr8_3:61699170-61699189 Msa1300220:intron 45.0%
! TCTAGAGCACGCAAAACTCA+AGG + chr8_3:61699203-61699222 Msa1300220:CDS 45.0%
GGAGAAGACTTGGATGGTTT+AGG + chr8_3:61699349-61699368 Msa1300220:CDS 45.0%
GGTGCAAAAGATGTGGTAGA+TGG + chr8_3:61699681-61699700 Msa1300220:intron 45.0%
CCGAATCGAGCTAATGAAGT+TGG - chr8_3:61700034-61700053 None:intergenic 45.0%
! TGTCCAGTTAAGTTGCTCCT+TGG + chr8_3:61700122-61700141 Msa1300220:intron 45.0%
CACGACGACTTTCACTCTAT+CGG + chr8_3:61700578-61700597 Msa1300220:intron 45.0%
TTACCAATAGGCGAGTGAAG+CGG - chr8_3:61700636-61700655 None:intergenic 45.0%
GGGCTACACGAATTACCAAT+AGG - chr8_3:61700648-61700667 None:intergenic 45.0%
! TAACAACTTGCTCGCCAAGA+AGG + chr8_3:61701225-61701244 Msa1300220:CDS 45.0%
ACTATGCCGAATGTGGTGTT+TGG + chr8_3:61701279-61701298 Msa1300220:intron 45.0%
CCGAATGTGGTGTTTGGATT+TGG + chr8_3:61701285-61701304 Msa1300220:intron 45.0%
! AGAGAAGGAACTTGCTCAAG+AGG + chr8_3:61701366-61701385 Msa1300220:CDS 45.0%
GGAACTGCAAAATAGTGTGG+AGG + chr8_3:61701387-61701406 Msa1300220:CDS 45.0%
!! GCCACCAAGATTTTGGCATT+TGG - chr8_3:61701886-61701905 None:intergenic 45.0%
ACAGCAGCACAAACAAGATG+TGG + chr8_3:61702116-61702135 Msa1300220:CDS 45.0%
ATAGGACGAATCATCCAAGG+TGG - chr8_3:61702152-61702171 None:intergenic 45.0%
GAATTTCATTGTTGCTGGGC+CGG + chr8_3:61702358-61702377 Msa1300220:three_prime_UTR 45.0%
!! TATAATAATAATATATGTTA+CGG + chr8_3:61696751-61696770 Msa1300220:intron 5.0%
!! AAAAAAAAAAAAGAAAATTT+AGG - chr8_3:61698978-61698997 None:intergenic 5.0%
!!! TTCCCCTCCCCATTTTTGGT+TGG - chr8_3:61696208-61696227 None:intergenic 50.0%
! ACTCTTCCCCTCCCCATTTT+TGG - chr8_3:61696212-61696231 None:intergenic 50.0%
AAGAACGTACCAAGGATCGC+TGG - chr8_3:61696390-61696409 None:intergenic 50.0%
!! AAAGTTGCTGGTTGGTGACG+TGG + chr8_3:61696837-61696856 Msa1300220:intron 50.0%
GACCGATCAAGTGTGTCAAC+GGG + chr8_3:61697074-61697093 Msa1300220:intron 50.0%
CTCCCGTTGACACACTTGAT+CGG - chr8_3:61697079-61697098 None:intergenic 50.0%
! GGGTGCTGCAACAACTCAAA+TGG + chr8_3:61697180-61697199 Msa1300220:intron 50.0%
AAACGATTTAGGGGGGAGGA+TGG - chr8_3:61698285-61698304 None:intergenic 50.0%
AGCACGCAAAACTCAAGGCT+AGG + chr8_3:61699208-61699227 Msa1300220:CDS 50.0%
CGCAAAACTCAAGGCTAGGA+TGG + chr8_3:61699212-61699231 Msa1300220:CDS 50.0%
! CAGTTAAGTTGCTCCTTGGC+CGG + chr8_3:61700126-61700145 Msa1300220:intron 50.0%
!! TTGTCACGCCCTTTAAGACC+CGG + chr8_3:61700551-61700570 Msa1300220:intron 50.0%
CGATAGAGTGAAAGTCGTCG+TGG - chr8_3:61700580-61700599 None:intergenic 50.0%
!! TTGGGTTGAGCTCTCCTCAT+AGG - chr8_3:61700719-61700738 None:intergenic 50.0%
GTGTGGTGACTCCCTCTTAA+TGG - chr8_3:61700751-61700770 None:intergenic 50.0%
TTCAAAGGTTCCCACCTCTC+TGG + chr8_3:61701487-61701506 Msa1300220:intron 50.0%
GCGAGACCATATAGTATGGC+CGG - chr8_3:61702380-61702399 None:intergenic 50.0%
! GGGGAAGAGTGCAGTTGAAG+AGG + chr8_3:61696222-61696241 Msa1300220:CDS 55.0%
ATCCCGAGCTGATCACGAAG+AGG + chr8_3:61700096-61700115 Msa1300220:intron 55.0%
CACCTCTTCGTGATCAGCTC+GGG - chr8_3:61700101-61700120 None:intergenic 55.0%
GCACCTCTTCGTGATCAGCT+CGG - chr8_3:61700102-61700121 None:intergenic 55.0%
CGGCCAAGGAGCAACTTAAC+TGG - chr8_3:61700128-61700147 None:intergenic 55.0%
TGCTCCTTGGCCGGAATTCA+AGG + chr8_3:61700135-61700154 Msa1300220:intron 55.0%
GCTCCTTGGCCGGAATTCAA+GGG + chr8_3:61700136-61700155 Msa1300220:intron 55.0%
CTTGGCCGGAATTCAAGGGA+GGG + chr8_3:61700140-61700159 Msa1300220:intron 55.0%
CCACACCCTCCCTTGAATTC+CGG - chr8_3:61700148-61700167 None:intergenic 55.0%
CGTGGACACCGGGTCTTAAA+GGG - chr8_3:61700562-61700581 None:intergenic 55.0%
TCGTGGACACCGGGTCTTAA+AGG - chr8_3:61700563-61700582 None:intergenic 55.0%
TGAAAGTCGTCGTGGACACC+GGG - chr8_3:61700572-61700591 None:intergenic 55.0%
GTGAAAGTCGTCGTGGACAC+CGG - chr8_3:61700573-61700592 None:intergenic 55.0%
GGCGAGTGAAGCGGTCATAA+AGG - chr8_3:61700627-61700646 None:intergenic 55.0%
TGACCGCTTCACTCGCCTAT+TGG + chr8_3:61700630-61700649 Msa1300220:intron 55.0%
CTATACACGGCCAGAGAGGT+GGG - chr8_3:61701500-61701519 None:intergenic 55.0%
ACTATACACGGCCAGAGAGG+TGG - chr8_3:61701501-61701520 None:intergenic 55.0%
TGCACTATACACGGCCAGAG+AGG - chr8_3:61701504-61701523 None:intergenic 55.0%
!! GTGGTGCCATTCTTCCACCT+TGG + chr8_3:61702135-61702154 Msa1300220:CDS 55.0%
GCACATACACCGCAGCTCCT+TGG - chr8_3:61696011-61696030 None:intergenic 60.0%
CCTCCCTTGAATTCCGGCCA+AGG - chr8_3:61700142-61700161 None:intergenic 60.0%
CCTTGGCCGGAATTCAAGGG+AGG + chr8_3:61700139-61700158 Msa1300220:intron 60.0%
CCGGAATTCAAGGGAGGGTG+TGG + chr8_3:61700145-61700164 Msa1300220:intron 60.0%
GCTGGGCCGGCCATACTATA+TGG + chr8_3:61702371-61702390 Msa1300220:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61695989 61702427 61695989 ID=Msa1300220;Name=Msa1300220
chr8_3 mRNA 61695989 61702427 61695989 ID=Msa1300220-mRNA-1;Parent=Msa1300220;Name=Msa1300220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=65|1|1|1|0.87|0.77|9|246|237
chr8_3 exon 61695989 61696022 61695989 ID=Msa1300220-mRNA-1:exon:18259;Parent=Msa1300220-mRNA-1
chr8_3 exon 61696184 61696399 61696184 ID=Msa1300220-mRNA-1:exon:18260;Parent=Msa1300220-mRNA-1
chr8_3 exon 61697751 61697829 61697751 ID=Msa1300220-mRNA-1:exon:18261;Parent=Msa1300220-mRNA-1
chr8_3 exon 61699192 61699256 61699192 ID=Msa1300220-mRNA-1:exon:18262;Parent=Msa1300220-mRNA-1
chr8_3 exon 61699339 61699438 61699339 ID=Msa1300220-mRNA-1:exon:18263;Parent=Msa1300220-mRNA-1
chr8_3 exon 61699533 61699574 61699533 ID=Msa1300220-mRNA-1:exon:18264;Parent=Msa1300220-mRNA-1
chr8_3 exon 61701205 61701246 61701205 ID=Msa1300220-mRNA-1:exon:18265;Parent=Msa1300220-mRNA-1
chr8_3 exon 61701355 61701455 61701355 ID=Msa1300220-mRNA-1:exon:18266;Parent=Msa1300220-mRNA-1
chr8_3 exon 61702082 61702427 61702082 ID=Msa1300220-mRNA-1:exon:18267;Parent=Msa1300220-mRNA-1
chr8_3 five_prime_UTR 61695989 61696022 61695989 ID=Msa1300220-mRNA-1:five_prime_utr;Parent=Msa1300220-mRNA-1
chr8_3 five_prime_UTR 61696184 61696214 61696184 ID=Msa1300220-mRNA-1:five_prime_utr;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61696215 61696399 61696215 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61697751 61697829 61697751 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61699192 61699256 61699192 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61699339 61699438 61699339 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61699533 61699574 61699533 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61701205 61701246 61701205 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61701355 61701455 61701355 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 CDS 61702082 61702181 61702082 ID=Msa1300220-mRNA-1:cds;Parent=Msa1300220-mRNA-1
chr8_3 three_prime_UTR 61702182 61702427 61702182 ID=Msa1300220-mRNA-1:three_prime_utr;Parent=Msa1300220-mRNA-1
Gene Sequence

>Msa1300220

ATGGGGAGGGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATCAATAGACAAGTCACTTTTTCAAAGAGAAGGTCTGGTTTGTTGAAGAAAGCACAAGAGATCTCTGTGCTTTGTGATGCTGATGTTGCTCTCATTATTTTCTCTACTAAAGGAAAGCTTTTTGAATACTCCAGCGATCCTTGTATGGAAAAAATTCTTGAACGATACGAGAGATGTTCGTATATGGAAAGGCAGCTTGTTACAAGTGACCAGTCACCAAATGAAAATTGGGTTCTAGAGCACGCAAAACTCAAGGCTAGGATGGAAGTGCTTCAGAGAAATCAAAGGAATTTTATGGGAGAAGACTTGGATGGTTTAGGTCTCAAAGAGCTTCAAAGTTTGGAGCAACAACTTGATTCAGCTCTCAAACAAATTAGATCACGGAAGAACCAAGTTATGTATGAATCTATTTCAGAACTTCAGAAAAAGGATAAGGCCCTCCAAGAACATAACAACTTGCTCGCCAAGAAGATAAAGGAAAAAGAGAAGGAACTTGCTCAAGAGGAACTGCAAAATAGTGTGGAGGTGACTCCAATTGAAACTCAACCATTGGAATCCATGAATACTACAGGATCTGGGTCCCAACATGCGAATTGCAATGAAGAAACAGCAGCACAAACAAGATGTGGTGCCATTCTTCCACCTTGGATGATTCGTCCTATAAATGAATAG
Protein sequence

>Msa1300220

MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAQEISVLCDADVALIIFSTKGKLFEYSSDPCMEKILERYERCSYMERQLVTSDQSPNENWVLEHAKLKARMEVLQRNQRNFMGEDLDGLGLKELQSLEQQLDSALKQIRSRKNQVMYESISELQKKDKALQEHNNLLAKKIKEKEKELAQEELQNSVEVTPIETQPLESMNTTGSGSQHANCNEETAAQTRCGAILPPWMIRPINE*