Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332190 | A0A072TEB1 | 97.855 | 373 | 8 | 0 | 1 | 373 | 1 | 373 | 0.0 | 745 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1332190 | Msa1433640 | 0.981402 | 1.680505e-152 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332190 | MtrunA17_Chr4g0060681 | 97.855 | 373 | 8 | 0 | 1 | 373 | 1 | 373 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332190 | AT1G74640.1 | 70.621 | 354 | 98 | 3 | 19 | 370 | 19 | 368 | 0.0 | 519 |
Find 135 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACTGCAGGCGCCTTTA+AGG | 0.104317 | 8_4:+52107739 | None:intergenic |
| TTGGCATCATCAAGATATTT+TGG | 0.129202 | 8_4:+52109417 | None:intergenic |
| CAATTCTTGCAACAGAATTT+TGG | 0.177594 | 8_4:-52107326 | Msa1332190:CDS |
| GAGAAAGGGTTTGCGAAATT+TGG | 0.180260 | 8_4:+52110731 | None:intergenic |
| AGTAGTCCGTGCTGCGAAAA+AGG | 0.196098 | 8_4:-52108160 | Msa1332190:CDS |
| TGATATAATGAAAAGGTTTA+AGG | 0.201671 | 8_4:+52110846 | None:intergenic |
| CCTTCAACTCTTTGCAGATT+TGG | 0.235687 | 8_4:-52107516 | Msa1332190:CDS |
| AGTCCAGTGGGAAATGATTT+TGG | 0.244831 | 8_4:+52107135 | None:intergenic |
| GGACAACCATGTAGCTAAAT+TGG | 0.250984 | 8_4:-52110972 | Msa1332190:five_prime_UTR |
| GGTCCCCTTCCTATCGTATT+TGG | 0.283801 | 8_4:-52108090 | Msa1332190:CDS |
| ATGGCTGGTGTCACGTTATC+AGG | 0.302525 | 8_4:+52107641 | None:intergenic |
| TGTTAAACTAGACAACAATT+TGG | 0.317013 | 8_4:-52108214 | Msa1332190:intron |
| TCTTCTAAGAGGCACCTTAA+AGG | 0.331435 | 8_4:-52107753 | Msa1332190:CDS |
| TGAAATTCTGCATCCTCTAA+TGG | 0.335653 | 8_4:-52110805 | Msa1332190:exon |
| TTACCCGCGGCTTTCTTGAC+TGG | 0.345149 | 8_4:-52107572 | Msa1332190:CDS |
| TTTAATAAATATTTATTATG+AGG | 0.349662 | 8_4:-52109468 | Msa1332190:CDS |
| TCAGCATTGTAATCAATCTT+TGG | 0.350565 | 8_4:+52109269 | None:intergenic |
| TAACTGTTTCCACAAATTAG+AGG | 0.361127 | 8_4:-52107077 | Msa1332190:three_prime_UTR |
| TTCTTAAACCCTTGAAGATC+CGG | 0.361648 | 8_4:-52110692 | Msa1332190:CDS |
| CAACTAAAGGGTCTCCTAAA+AGG | 0.373750 | 8_4:-52107466 | Msa1332190:CDS |
| ACCTTAAAGGCGCCTGCAGT+TGG | 0.374128 | 8_4:-52107740 | Msa1332190:CDS |
| ATAGTTATTCTCACCTTCAA+TGG | 0.376617 | 8_4:+52110618 | None:intergenic |
| TTAGTTGATACAACAAATAC+TGG | 0.382699 | 8_4:+52107482 | None:intergenic |
| GCAACAGCAGCTATAGCTTT+GGG | 0.386160 | 8_4:+52108126 | None:intergenic |
| GTTAGCTATGAAGATTCATA+TGG | 0.386956 | 8_4:+52107024 | None:intergenic |
| ATTGTTGATTGGCCTGGTCT+AGG | 0.387080 | 8_4:-52109305 | Msa1332190:CDS |
| CCAAATCTGCAAAGAGTTGA+AGG | 0.392385 | 8_4:+52107516 | None:intergenic |
| TGCAACAGCAGCTATAGCTT+TGG | 0.393323 | 8_4:+52108125 | None:intergenic |
| ATAAACAGAGTGAGAGAGAA+AGG | 0.394175 | 8_4:+52110716 | None:intergenic |
| GCTGTTGCACCCACTTGGTC+TGG | 0.395668 | 8_4:-52108111 | Msa1332190:CDS |
| ACCGCACTACTATTGTTGAT+TGG | 0.409875 | 8_4:-52109316 | Msa1332190:CDS |
| CCTTAAAGGCGCCTGCAGTT+GGG | 0.416753 | 8_4:-52107739 | Msa1332190:CDS |
| GGCACAAAGATACTGAATAA+TGG | 0.424213 | 8_4:+52106948 | None:intergenic |
| TGGAAACAGTTATCTTTCAC+TGG | 0.425630 | 8_4:+52107088 | None:intergenic |
| GATTTCATCAATTCACCCTA+TGG | 0.425874 | 8_4:-52109224 | Msa1332190:CDS |
| AACATGTCGCCTCTAATTTG+TGG | 0.430514 | 8_4:+52107068 | None:intergenic |
| GTTGCAGAGAGTGCCATTAG+AGG | 0.440819 | 8_4:+52110792 | None:intergenic |
| GTATTTGTTGTATCAACTAA+AGG | 0.441722 | 8_4:-52107479 | Msa1332190:CDS |
| TATTTGTTGTATCAACTAAA+GGG | 0.442235 | 8_4:-52107478 | Msa1332190:CDS |
| TGACAAATCTTCTCCATTGA+AGG | 0.446606 | 8_4:-52110631 | Msa1332190:intron |
| GTGTAAAGGTTAGAACTTGA+AGG | 0.449656 | 8_4:+52110753 | None:intergenic |
| GAATAATGGTAGGGGCCATC+AGG | 0.452543 | 8_4:+52106962 | None:intergenic |
| GGTTGAAGAAAGATAGTAAT+GGG | 0.452915 | 8_4:-52107231 | Msa1332190:three_prime_UTR |
| GTTTGCGAAATTTGGTGTAA+AGG | 0.453319 | 8_4:+52110739 | None:intergenic |
| AACAGTGCTCACATCAGAAA+TGG | 0.454974 | 8_4:+52109394 | None:intergenic |
| GCTGAGATGGAAGCTCTTAA+CGG | 0.459166 | 8_4:-52107437 | Msa1332190:CDS |
| AGCTCTTCCGCGACTAAAGC+AGG | 0.462416 | 8_4:+52107353 | None:intergenic |
| CTATCACCAATTTAGCTACA+TGG | 0.472567 | 8_4:+52110966 | None:intergenic |
| AGGGTCTCCTAAAAGGTCTA+AGG | 0.474040 | 8_4:-52107459 | Msa1332190:CDS |
| TGATTACAATGCTGACGTCT+TGG | 0.475636 | 8_4:-52109261 | Msa1332190:CDS |
| TGCACAGGCAATAATATTAG+TGG | 0.476061 | 8_4:-52107253 | Msa1332190:three_prime_UTR |
| TCAACTCTTTGCAGATTTGG+AGG | 0.476813 | 8_4:-52107513 | Msa1332190:CDS |
| TTGTTTCCATGCTGGAATCT+CGG | 0.482856 | 8_4:+52108067 | None:intergenic |
| TAGCTGCTGTTGCACCCACT+TGG | 0.485030 | 8_4:-52108116 | Msa1332190:CDS |
| AAGAGACATTGGAATAATCA+AGG | 0.490245 | 8_4:+52110658 | None:intergenic |
| ACTACTATTGTTGATTGGCC+TGG | 0.490253 | 8_4:-52109311 | Msa1332190:CDS |
| ATCAGACTAGCAACTGGCAG+TGG | 0.495627 | 8_4:-52109505 | Msa1332190:intron |
| TGAAGAATGATATAATGAAA+AGG | 0.497054 | 8_4:+52110839 | None:intergenic |
| TCTTAAACCCTTGAAGATCC+GGG | 0.498375 | 8_4:-52110691 | Msa1332190:CDS |
| TAAAAGGTCTAAGGCTGAGA+TGG | 0.498747 | 8_4:-52107450 | Msa1332190:CDS |
| CAACTCTTTGCAGATTTGGA+GGG | 0.500215 | 8_4:-52107512 | Msa1332190:CDS |
| TACATAAATATGTATACCCT+TGG | 0.503007 | 8_4:+52107207 | None:intergenic |
| GAAGCTCTTAACGGAGCTAA+AGG | 0.503984 | 8_4:-52107428 | Msa1332190:CDS |
| GGAACATGTGAAGGAGAGTT+CGG | 0.504267 | 8_4:-52109447 | Msa1332190:CDS |
| CATGTGATTTGTACTGCGAT+TGG | 0.504645 | 8_4:+52107675 | None:intergenic |
| TAAACAGAGTGAGAGAGAAA+GGG | 0.504897 | 8_4:+52110717 | None:intergenic |
| TAAAGGAGTGAGCAAGTTTG+TGG | 0.516133 | 8_4:-52107411 | Msa1332190:CDS |
| ATAGTACCTTGTTTCCATGC+TGG | 0.516722 | 8_4:+52108059 | None:intergenic |
| TTTGTCACTGGAAGAGACAT+TGG | 0.523723 | 8_4:+52110647 | None:intergenic |
| TGCATATCTGCTTTCGACAA+TGG | 0.528904 | 8_4:+52107622 | None:intergenic |
| TGGTGTCACGTTATCAGGAT+TGG | 0.532092 | 8_4:+52107646 | None:intergenic |
| CAAAGATACTGAATAATGGT+AGG | 0.535120 | 8_4:+52106952 | None:intergenic |
| GACAGGTATGGTCTTCTAAG+AGG | 0.537611 | 8_4:-52107764 | Msa1332190:intron |
| AGTTGAAGCCCGGATCTTCA+AGG | 0.538256 | 8_4:+52110683 | None:intergenic |
| GAAGACATTGCTCAACGTAA+TGG | 0.538261 | 8_4:-52109350 | Msa1332190:CDS |
| TTAGCTATGAAGATTCATAT+GGG | 0.539283 | 8_4:+52107025 | None:intergenic |
| TACACCATCCACCCAACTGC+AGG | 0.541976 | 8_4:+52107728 | None:intergenic |
| AGCAAGTTTGTGGAAGTGCC+TGG | 0.543593 | 8_4:-52107401 | Msa1332190:CDS |
| GGCGCCTGCAGTTGGGTGGA+TGG | 0.552084 | 8_4:-52107732 | Msa1332190:CDS |
| CTCGGCCAAATACGATAGGA+AGG | 0.553390 | 8_4:+52108085 | None:intergenic |
| TGGTGCTCTTCTTCCACAAG+AGG | 0.557293 | 8_4:-52107381 | Msa1332190:CDS |
| TATCTGCTTTCGACAATGGC+TGG | 0.559916 | 8_4:+52107626 | None:intergenic |
| CAATGGAGAAGATTTGTCAC+TGG | 0.560902 | 8_4:+52110635 | None:intergenic |
| CACGGGATGTTACAGGGTCT+AGG | 0.561594 | 8_4:+52107546 | None:intergenic |
| CAACTGGCAGTGGAAATTCA+AGG | 0.569094 | 8_4:-52109495 | Msa1332190:CDS |
| CACATGGTACTTGTGTATGT+TGG | 0.570576 | 8_4:-52107283 | Msa1332190:three_prime_UTR |
| AGGAAGGGGACCAGACCAAG+TGG | 0.570715 | 8_4:+52108101 | None:intergenic |
| AAAGATACTGAATAATGGTA+GGG | 0.571487 | 8_4:+52106953 | None:intergenic |
| GTTGAAGCCCGGATCTTCAA+GGG | 0.571737 | 8_4:+52110684 | None:intergenic |
| TTATTATGAGGAACATGTGA+AGG | 0.571752 | 8_4:-52109456 | Msa1332190:CDS |
| TTGCCAAAATCATTTCCCAC+TGG | 0.573272 | 8_4:-52107138 | Msa1332190:three_prime_UTR |
| AATCAAGGGTAGTTGAAGCC+CGG | 0.574487 | 8_4:+52110673 | None:intergenic |
| GAGTTGAAGGAACTCCTCAC+GGG | 0.577784 | 8_4:+52107529 | None:intergenic |
| CGGCCAAATACGATAGGAAG+GGG | 0.580257 | 8_4:+52108087 | None:intergenic |
| GCACAGGCAATAATATTAGT+GGG | 0.582169 | 8_4:-52107252 | Msa1332190:three_prime_UTR |
| TCTTGTGGAAGAAGAGCACC+AGG | 0.583551 | 8_4:+52107383 | None:intergenic |
| TCTGCTATAGTTCCATTCCG+TGG | 0.583780 | 8_4:-52110880 | Msa1332190:five_prime_UTR |
| TTCTGATGTGAGCACTGTTG+AGG | 0.584543 | 8_4:-52109390 | Msa1332190:CDS |
| AGAGTTGAAGGAACTCCTCA+CGG | 0.588545 | 8_4:+52107528 | None:intergenic |
| AGGTTAGAACTTGAAGGTGA+AGG | 0.589083 | 8_4:+52110759 | None:intergenic |
| GGCCATCAGGATACCCACAC+AGG | 0.589117 | 8_4:+52106975 | None:intergenic |
| AAAGATAGTAATGGGACCAA+GGG | 0.591891 | 8_4:-52107223 | Msa1332190:three_prime_UTR |
| AAAGCAGGATACTCCTCTTG+TGG | 0.594658 | 8_4:+52107368 | None:intergenic |
| GAAAGATAGTAATGGGACCA+AGG | 0.595183 | 8_4:-52107224 | Msa1332190:three_prime_UTR |
| GTATACATATTTATGTAATG+TGG | 0.599384 | 8_4:-52107201 | Msa1332190:three_prime_UTR |
| CGATCAGAATAACCTAGACC+AGG | 0.599579 | 8_4:+52109293 | None:intergenic |
| GTGCTCACATCAGAAATGGT+TGG | 0.600768 | 8_4:+52109398 | None:intergenic |
| GGAAACAGTTATCTTTCACT+GGG | 0.602157 | 8_4:+52107089 | None:intergenic |
| AGAGACATTGGAATAATCAA+GGG | 0.606155 | 8_4:+52110659 | None:intergenic |
| GAATCTCGGCCAAATACGAT+AGG | 0.608486 | 8_4:+52108081 | None:intergenic |
| TAAAGGCGCCTGCAGTTGGG+TGG | 0.609424 | 8_4:-52107736 | Msa1332190:CDS |
| GAGATTCCAGCATGGAAACA+AGG | 0.610360 | 8_4:-52108065 | Msa1332190:intron |
| AGTCCAGTCAAGAAAGCCGC+GGG | 0.612625 | 8_4:+52107569 | None:intergenic |
| AAGATACTGAATAATGGTAG+GGG | 0.612746 | 8_4:+52106954 | None:intergenic |
| AAGTCAAACATCAGTCCAGT+GGG | 0.614257 | 8_4:+52107123 | None:intergenic |
| ATAAAATCTAATCAAGTCCA+CGG | 0.616862 | 8_4:-52110912 | Msa1332190:five_prime_UTR |
| ACTCCTCACGGGATGTTACA+GGG | 0.624393 | 8_4:+52107540 | None:intergenic |
| TCGGCCAAATACGATAGGAA+GGG | 0.628777 | 8_4:+52108086 | None:intergenic |
| CAAGTCAAACATCAGTCCAG+TGG | 0.629595 | 8_4:+52107122 | None:intergenic |
| GGGTTGAAGAAAGATAGTAA+TGG | 0.642136 | 8_4:-52107232 | Msa1332190:three_prime_UTR |
| TATGTTGGTGAAGCTTGCAC+AGG | 0.645457 | 8_4:-52107268 | Msa1332190:three_prime_UTR |
| GAGTCCAGTCAAGAAAGCCG+CGG | 0.650624 | 8_4:+52107568 | None:intergenic |
| ATAGCAGAAAATACTGACCG+TGG | 0.653567 | 8_4:+52110895 | None:intergenic |
| ACCCTGTGTGGGTATCCTGA+TGG | 0.657405 | 8_4:-52106977 | Msa1332190:three_prime_UTR |
| ATGTGAGCACTGTTGAGGAG+TGG | 0.662423 | 8_4:-52109385 | Msa1332190:CDS |
| TAGCTATGAAGATTCATATG+GGG | 0.663913 | 8_4:+52107026 | None:intergenic |
| GTCGCTTAAAAGTTGACACA+TGG | 0.670730 | 8_4:-52107299 | Msa1332190:exon |
| GCCAATCAACAATAGTAGTG+CGG | 0.675154 | 8_4:+52109315 | None:intergenic |
| GGAGTATCCTGCTTTAGTCG+CGG | 0.676120 | 8_4:-52107360 | Msa1332190:CDS |
| GGAAGGGGACCAGACCAAGT+GGG | 0.693482 | 8_4:+52108102 | None:intergenic |
| GCCATCAGGATACCCACACA+GGG | 0.702305 | 8_4:+52106976 | None:intergenic |
| ATTTGGCCGAGATTCCAGCA+TGG | 0.719142 | 8_4:-52108073 | Msa1332190:CDS |
| TATGGTCCAGTAAAACAACC+AGG | 0.727257 | 8_4:-52109206 | Msa1332190:intron |
| AGACCCTGTAACATCCCGTG+AGG | 0.736244 | 8_4:-52107543 | Msa1332190:CDS |
| TATGCATTGACAAAACGACA+AGG | 0.775132 | 8_4:-52107605 | Msa1332190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTATTTTTTAAT+TGG | - | chr8_4:52107379-52107398 | Msa1332190:CDS | 0.0% |
| !!! | TTTTTTTTTTTAAAAGCAAT+TGG | - | chr8_4:52107436-52107455 | Msa1332190:CDS | 10.0% |
| !! | AAAATGAAAGAAAAAAAAAA+GGG | + | chr8_4:52108431-52108450 | None:intergenic | 10.0% |
| !! | CTAAAATATATTTACTAAAT+TGG | - | chr8_4:52108991-52109010 | Msa1332190:intron | 10.0% |
| !! | AAAAAATAGTGTTAGAAAAA+CGG | - | chr8_4:52106954-52106973 | Msa1332190:three_prime_UTR | 15.0% |
| !! | AGTAAAATGACAAAAATTTA+AGG | + | chr8_4:52107413-52107432 | None:intergenic | 15.0% |
| !! | GTTACTCTTAAATAAATAAA+AGG | + | chr8_4:52108211-52108230 | None:intergenic | 15.0% |
| !! | AATATGGAAGAAAAAAAAAT+CGG | + | chr8_4:52108391-52108410 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCTTCCATATTT+TGG | - | chr8_4:52108392-52108411 | Msa1332190:intron | 15.0% |
| !! | GAAAATGAAAGAAAAAAAAA+AGG | + | chr8_4:52108432-52108451 | None:intergenic | 15.0% |
| !!! | TATTATTTATAAGCTTGTTA+AGG | + | chr8_4:52109161-52109180 | None:intergenic | 15.0% |
| !! | ATTAGATGGTAATATATAAA+AGG | - | chr8_4:52109992-52110011 | Msa1332190:intron | 15.0% |
| !! | TTAGATGGTAATATATAAAA+GGG | - | chr8_4:52109993-52110012 | Msa1332190:intron | 15.0% |
| !! | TTAAGGTTAATAAAAAACCA+CGG | + | chr8_4:52107098-52107117 | None:intergenic | 20.0% |
| !! | TGATATAATGAAAAGGTTTA+AGG | + | chr8_4:52107115-52107134 | None:intergenic | 20.0% |
| !! | TGAAGAATGATATAATGAAA+AGG | + | chr8_4:52107122-52107141 | None:intergenic | 20.0% |
| !! | TAAATAAATAACTGATAGAG+AGG | + | chr8_4:52107366-52107385 | None:intergenic | 20.0% |
| !! | GATTATTCATAATTCAAAGT+TGG | - | chr8_4:52107468-52107487 | Msa1332190:CDS | 20.0% |
| !! | TTACATGTATATCTAATTGT+TGG | - | chr8_4:52107587-52107606 | Msa1332190:CDS | 20.0% |
| !! | CTTAAATAAATAAAAGGCAA+GGG | + | chr8_4:52108205-52108224 | None:intergenic | 20.0% |
| !! | TCTTAAATAAATAAAAGGCA+AGG | + | chr8_4:52108206-52108225 | None:intergenic | 20.0% |
| !! | GATTTATACTCAATTTAAAG+AGG | - | chr8_4:52108359-52108378 | Msa1332190:intron | 20.0% |
| !!! | ATTCCTCCTTTTAATTATTT+TGG | - | chr8_4:52108913-52108932 | Msa1332190:intron | 20.0% |
| !!! | TTCCTCCTTTTAATTATTTT+GGG | - | chr8_4:52108914-52108933 | Msa1332190:intron | 20.0% |
| !! | AACTACCCAAAATAATTAAA+AGG | + | chr8_4:52108922-52108941 | None:intergenic | 20.0% |
| !!! | GGTTTATTTTCTTTATTGAT+TGG | - | chr8_4:52109322-52109341 | Msa1332190:CDS | 20.0% |
| !!! | TTATTTTCTTTATTGATTGG+TGG | - | chr8_4:52109325-52109344 | Msa1332190:CDS | 20.0% |
| !!! | TATTTTCTTTATTGATTGGT+GGG | - | chr8_4:52109326-52109345 | Msa1332190:CDS | 20.0% |
| !! | AAAAAAATGCTCATTGAAAA+GGG | + | chr8_4:52109932-52109951 | None:intergenic | 20.0% |
| !! | TAGATGGTAATATATAAAAG+GGG | - | chr8_4:52109994-52110013 | Msa1332190:intron | 20.0% |
| !!! | TATTTGTTGTATCAACTAAA+GGG | - | chr8_4:52110480-52110499 | Msa1332190:intron | 20.0% |
| !! | GTATACATATTTATGTAATG+TGG | - | chr8_4:52110757-52110776 | Msa1332190:CDS | 20.0% |
| !! | GACTTGATTAGATTTTATGT+TGG | + | chr8_4:52107044-52107063 | None:intergenic | 25.0% |
| ! | ATAAAATCTAATCAAGTCCA+CGG | - | chr8_4:52107046-52107065 | Msa1332190:three_prime_UTR | 25.0% |
| ! | ACGGTTAATCAACAAATTAA+TGG | - | chr8_4:52107556-52107575 | Msa1332190:CDS | 25.0% |
| !! | CATTTTAGATCAGTATAGTT+CGG | - | chr8_4:52108844-52108863 | Msa1332190:intron | 25.0% |
| ! | TACCCAAAATAATTAAAAGG+AGG | + | chr8_4:52108919-52108938 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTTGAGAAGTTTA+TGG | - | chr8_4:52108967-52108986 | Msa1332190:intron | 25.0% |
| ! | ATATTTGAGAAATTGTGCTA+AGG | - | chr8_4:52109019-52109038 | Msa1332190:intron | 25.0% |
| ! | TATTTGAGAAATTGTGCTAA+GGG | - | chr8_4:52109020-52109039 | Msa1332190:intron | 25.0% |
| ! | AAAGCTACATAAAAGACTTA+GGG | + | chr8_4:52109250-52109269 | None:intergenic | 25.0% |
| ! | AAAAGCTACATAAAAGACTT+AGG | + | chr8_4:52109251-52109270 | None:intergenic | 25.0% |
| !! | TAAGTCTTTTATGTAGCTTT+TGG | - | chr8_4:52109250-52109269 | Msa1332190:CDS | 25.0% |
| ! | TGTTAAACTAGACAACAATT+TGG | - | chr8_4:52109744-52109763 | Msa1332190:intron | 25.0% |
| ! | AAAAAATGCTCATTGAAAAG+GGG | + | chr8_4:52109931-52109950 | None:intergenic | 25.0% |
| ! | GAAAAAAATGCTCATTGAAA+AGG | + | chr8_4:52109933-52109952 | None:intergenic | 25.0% |
| !!! | GATTTCTAGTTTCTATTAGA+TGG | - | chr8_4:52109978-52109997 | Msa1332190:intron | 25.0% |
| ! | AGATGGTAATATATAAAAGG+GGG | - | chr8_4:52109995-52110014 | Msa1332190:intron | 25.0% |
| !! | TTAGTTGATACAACAAATAC+TGG | + | chr8_4:52110479-52110498 | None:intergenic | 25.0% |
| !!! | GTATTTGTTGTATCAACTAA+AGG | - | chr8_4:52110479-52110498 | Msa1332190:intron | 25.0% |
| ! | TACATAAATATGTATACCCT+TGG | + | chr8_4:52110754-52110773 | None:intergenic | 25.0% |
| ! | TTAGCTATGAAGATTCATAT+GGG | + | chr8_4:52110936-52110955 | None:intergenic | 25.0% |
| ! | AAAGATACTGAATAATGGTA+GGG | + | chr8_4:52111008-52111027 | None:intergenic | 25.0% |
| !! | TTAGAAAAACGGTGTTGTTT+AGG | - | chr8_4:52106965-52106984 | Msa1332190:three_prime_UTR | 30.0% |
| GTTAATAAAAAACCACGGAA+TGG | + | chr8_4:52107093-52107112 | None:intergenic | 30.0% | |
| AGAGACATTGGAATAATCAA+GGG | + | chr8_4:52107302-52107321 | None:intergenic | 30.0% | |
| AAGAGACATTGGAATAATCA+AGG | + | chr8_4:52107303-52107322 | None:intergenic | 30.0% | |
| ATAGTTATTCTCACCTTCAA+TGG | + | chr8_4:52107343-52107362 | None:intergenic | 30.0% | |
| AAGGAAGAAGATCATAAACA+TGG | - | chr8_4:52107638-52107657 | Msa1332190:CDS | 30.0% | |
| GAAGAAAAAAAAATCGGATC+TGG | + | chr8_4:52108385-52108404 | None:intergenic | 30.0% | |
| TTATTATGAGGAACATGTGA+AGG | - | chr8_4:52108502-52108521 | Msa1332190:intron | 30.0% | |
| !! | ATCATCAAGATATTTTGGGA+AGG | + | chr8_4:52108539-52108558 | None:intergenic | 30.0% |
| ! | TGGCATCATCAAGATATTTT+GGG | + | chr8_4:52108543-52108562 | None:intergenic | 30.0% |
| ! | TTGGCATCATCAAGATATTT+TGG | + | chr8_4:52108544-52108563 | None:intergenic | 30.0% |
| TCAGCATTGTAATCAATCTT+TGG | + | chr8_4:52108692-52108711 | None:intergenic | 30.0% | |
| !!! | TTATTTTGGGTAGTTTCTCT+TGG | - | chr8_4:52108927-52108946 | Msa1332190:intron | 30.0% |
| CTAAAATAAGCCAATCCAAA+CGG | - | chr8_4:52109223-52109242 | Msa1332190:CDS | 30.0% | |
| AATACAATTCCTAATGTGCT+TGG | - | chr8_4:52109281-52109300 | Msa1332190:CDS | 30.0% | |
| ! | TTTATTGATTGGTGGGTATT+AGG | - | chr8_4:52109333-52109352 | Msa1332190:CDS | 30.0% |
| GATCTACAGTTAACTATTGT+TGG | - | chr8_4:52109407-52109426 | Msa1332190:CDS | 30.0% | |
| TGATTTGAAAACTATACTGG+TGG | + | chr8_4:52109489-52109508 | None:intergenic | 30.0% | |
| CCATGATTTGAAAACTATAC+TGG | + | chr8_4:52109492-52109511 | None:intergenic | 30.0% | |
| ! | CCAGTATAGTTTTCAAATCA+TGG | - | chr8_4:52109489-52109508 | Msa1332190:CDS | 30.0% |
| TGCAAAATTCCATCAGATAA+CGG | + | chr8_4:52109559-52109578 | None:intergenic | 30.0% | |
| ! | TCCAATGATTGTCTTTTGTT+TGG | - | chr8_4:52109631-52109650 | Msa1332190:intron | 30.0% |
| !! | CCAATGATTGTCTTTTGTTT+GGG | - | chr8_4:52109632-52109651 | Msa1332190:intron | 30.0% |
| TATTCAACTAATCATGGAAG+CGG | + | chr8_4:52109677-52109696 | None:intergenic | 30.0% | |
| GTGACATATTCAACTAATCA+TGG | + | chr8_4:52109683-52109702 | None:intergenic | 30.0% | |
| !! | GACAACAATTTGGTGATTTT+TGG | - | chr8_4:52109754-52109773 | Msa1332190:intron | 30.0% |
| !! | AACAATTTGGTGATTTTTGG+TGG | - | chr8_4:52109757-52109776 | Msa1332190:intron | 30.0% |
| AAAACAAGTTATCACCTATC+AGG | + | chr8_4:52110147-52110166 | None:intergenic | 30.0% | |
| ! | CAATTCTTGCAACAGAATTT+TGG | - | chr8_4:52110632-52110651 | Msa1332190:CDS | 30.0% |
| GGTTGAAGAAAGATAGTAAT+GGG | - | chr8_4:52110727-52110746 | Msa1332190:CDS | 30.0% | |
| TAACTGTTTCCACAAATTAG+AGG | - | chr8_4:52110881-52110900 | Msa1332190:five_prime_UTR | 30.0% | |
| TAGCTATGAAGATTCATATG+GGG | + | chr8_4:52110935-52110954 | None:intergenic | 30.0% | |
| GTTAGCTATGAAGATTCATA+TGG | + | chr8_4:52110937-52110956 | None:intergenic | 30.0% | |
| !!! | ACATTTTAAAATACCCTGTG+TGG | - | chr8_4:52110969-52110988 | Msa1332190:five_prime_UTR | 30.0% |
| !!! | CATTTTAAAATACCCTGTGT+GGG | - | chr8_4:52110970-52110989 | Msa1332190:five_prime_UTR | 30.0% |
| AAGATACTGAATAATGGTAG+GGG | + | chr8_4:52111007-52111026 | None:intergenic | 30.0% | |
| CAAAGATACTGAATAATGGT+AGG | + | chr8_4:52111009-52111028 | None:intergenic | 30.0% | |
| CTATCACCAATTTAGCTACA+TGG | + | chr8_4:52106995-52107014 | None:intergenic | 35.0% | |
| TGAAATTCTGCATCCTCTAA+TGG | - | chr8_4:52107153-52107172 | Msa1332190:three_prime_UTR | 35.0% | |
| GTGTAAAGGTTAGAACTTGA+AGG | + | chr8_4:52107208-52107227 | None:intergenic | 35.0% | |
| !! | GTTTGCGAAATTTGGTGTAA+AGG | + | chr8_4:52107222-52107241 | None:intergenic | 35.0% |
| TAAACAGAGTGAGAGAGAAA+GGG | + | chr8_4:52107244-52107263 | None:intergenic | 35.0% | |
| ATAAACAGAGTGAGAGAGAA+AGG | + | chr8_4:52107245-52107264 | None:intergenic | 35.0% | |
| TTCTTAAACCCTTGAAGATC+CGG | - | chr8_4:52107266-52107285 | Msa1332190:three_prime_UTR | 35.0% | |
| TGACAAATCTTCTCCATTGA+AGG | - | chr8_4:52107327-52107346 | Msa1332190:CDS | 35.0% | |
| GCTTTACACAAACCTCAAAT+GGG | + | chr8_4:52107497-52107516 | None:intergenic | 35.0% | |
| AGCTTTACACAAACCTCAAA+TGG | + | chr8_4:52107498-52107517 | None:intergenic | 35.0% | |
| !! | TGTGTAAAGCTTGTTGAATC+TGG | - | chr8_4:52107507-52107526 | Msa1332190:CDS | 35.0% |
| !! | AAGTCTGAAGTGAGTATTGA+CGG | - | chr8_4:52107537-52107556 | Msa1332190:CDS | 35.0% |
| ! | TTCCTTTTGATCCATGGATT+CGG | + | chr8_4:52107624-52107643 | None:intergenic | 35.0% |
| ! | ATCTTCTTCCTTTTGATCCA+TGG | + | chr8_4:52107630-52107649 | None:intergenic | 35.0% |
| GAACGTGAAAAACGAGAAAT+CGG | - | chr8_4:52107733-52107752 | Msa1332190:CDS | 35.0% | |
| ATCATAACAACAGAGAATCG+TGG | - | chr8_4:52107800-52107819 | Msa1332190:intron | 35.0% | |
| ! | GATTAGGCCAACAAATTTTC+TGG | - | chr8_4:52107835-52107854 | Msa1332190:intron | 35.0% |
| !! | CCAACAAATTTTCTGGTGTA+CGG | - | chr8_4:52107842-52107861 | Msa1332190:intron | 35.0% |
| ! | CCTAAAGTGTTAAACGCAAA+TGG | + | chr8_4:52108039-52108058 | None:intergenic | 35.0% |
| CCATTTGCGTTTAACACTTT+AGG | - | chr8_4:52108036-52108055 | Msa1332190:intron | 35.0% | |
| ATAACAATGTTGTGTCTCCT+AGG | - | chr8_4:52108112-52108131 | Msa1332190:CDS | 35.0% | |
| TGCCATATAGAAAGAGTTAG+CGG | - | chr8_4:52108167-52108186 | Msa1332190:CDS | 35.0% | |
| AATCCCTATCTAACTCCTAA+AGG | - | chr8_4:52108254-52108273 | Msa1332190:intron | 35.0% | |
| ! | ACTCCTTTAGGAGTTAGATA+GGG | + | chr8_4:52108260-52108279 | None:intergenic | 35.0% |
| ! | AACTCCTTTAGGAGTTAGAT+AGG | + | chr8_4:52108261-52108280 | None:intergenic | 35.0% |
| !!! | TTTCTTCCATATTTTGGCTC+AGG | - | chr8_4:52108398-52108417 | Msa1332190:intron | 35.0% |
| ATTATGCCTGAGCCAAAATA+TGG | + | chr8_4:52108407-52108426 | None:intergenic | 35.0% | |
| TGACGTCTTGGAAAAATTTC+TGG | - | chr8_4:52108709-52108728 | Msa1332190:intron | 35.0% | |
| GATTTCATCAATTCACCCTA+TGG | - | chr8_4:52108734-52108753 | Msa1332190:intron | 35.0% | |
| TGTACTTGTTTCATTGTTGC+TGG | - | chr8_4:52109370-52109389 | Msa1332190:CDS | 35.0% | |
| ATACTGGTGGTTCATTGAAT+CGG | + | chr8_4:52109476-52109495 | None:intergenic | 35.0% | |
| !! | ATCAGATAACGGAAGAAACA+TGG | + | chr8_4:52109548-52109567 | None:intergenic | 35.0% |
| ATGTTTCTTCCGTTATCTGA+TGG | - | chr8_4:52109547-52109566 | Msa1332190:intron | 35.0% | |
| CCCAAACAAAAGACAATCAT+TGG | + | chr8_4:52109635-52109654 | None:intergenic | 35.0% | |
| GTCTTTGTGACTAACATTGT+TGG | - | chr8_4:52109721-52109740 | Msa1332190:intron | 35.0% | |
| !!! | AATTTGGTGATTTTTGGTGG+AGG | - | chr8_4:52109760-52109779 | Msa1332190:intron | 35.0% |
| !!! | ATTTGGTGATTTTTGGTGGA+GGG | - | chr8_4:52109761-52109780 | Msa1332190:intron | 35.0% |
| TCAATGCTACAGTGATCAAT+TGG | + | chr8_4:52109960-52109979 | None:intergenic | 35.0% | |
| CTTGTTGACATCTAAATGCT+CGG | - | chr8_4:52110059-52110078 | Msa1332190:intron | 35.0% | |
| TATGTCACAAACAACCTGAT+AGG | - | chr8_4:52110130-52110149 | Msa1332190:intron | 35.0% | |
| ! | TATGCATTGACAAAACGACA+AGG | - | chr8_4:52110353-52110372 | Msa1332190:intron | 35.0% |
| TGCACAGGCAATAATATTAG+TGG | - | chr8_4:52110705-52110724 | Msa1332190:CDS | 35.0% | |
| GCACAGGCAATAATATTAGT+GGG | - | chr8_4:52110706-52110725 | Msa1332190:CDS | 35.0% | |
| GGGTTGAAGAAAGATAGTAA+TGG | - | chr8_4:52110726-52110745 | Msa1332190:CDS | 35.0% | |
| ! | AAAGATAGTAATGGGACCAA+GGG | - | chr8_4:52110735-52110754 | Msa1332190:CDS | 35.0% |
| GGAAACAGTTATCTTTCACT+GGG | + | chr8_4:52110872-52110891 | None:intergenic | 35.0% | |
| TGGAAACAGTTATCTTTCAC+TGG | + | chr8_4:52110873-52110892 | None:intergenic | 35.0% | |
| GGACAACCATGTAGCTAAAT+TGG | - | chr8_4:52106986-52107005 | Msa1332190:three_prime_UTR | 40.0% | |
| ATAGCAGAAAATACTGACCG+TGG | + | chr8_4:52107066-52107085 | None:intergenic | 40.0% | |
| AGGTTAGAACTTGAAGGTGA+AGG | + | chr8_4:52107202-52107221 | None:intergenic | 40.0% | |
| GAGAAAGGGTTTGCGAAATT+TGG | + | chr8_4:52107230-52107249 | None:intergenic | 40.0% | |
| TCTTAAACCCTTGAAGATCC+GGG | - | chr8_4:52107267-52107286 | Msa1332190:three_prime_UTR | 40.0% | |
| TTTGTCACTGGAAGAGACAT+TGG | + | chr8_4:52107314-52107333 | None:intergenic | 40.0% | |
| CAATGGAGAAGATTTGTCAC+TGG | + | chr8_4:52107326-52107345 | None:intergenic | 40.0% | |
| TTCCGAATCCATGGATCAAA+AGG | - | chr8_4:52107619-52107638 | Msa1332190:CDS | 40.0% | |
| TGAACATGCAATCTAGTGAC+CGG | + | chr8_4:52107689-52107708 | None:intergenic | 40.0% | |
| TTGATGCTCGTGCATCAAAT+TGG | - | chr8_4:52107764-52107783 | Msa1332190:intron | 40.0% | |
| GCATCAAATTGGTGAATGCA+CGG | - | chr8_4:52107775-52107794 | Msa1332190:intron | 40.0% | |
| ! | GTGGTCCTTTGAGAATGATT+AGG | - | chr8_4:52107819-52107838 | Msa1332190:intron | 40.0% |
| ! | GTTGGCCTAATCATTCTCAA+AGG | + | chr8_4:52107827-52107846 | None:intergenic | 40.0% |
| CCGTACACCAGAAAATTTGT+TGG | + | chr8_4:52107845-52107864 | None:intergenic | 40.0% | |
| AGGAAGGAAACATGCATGTT+TGG | - | chr8_4:52107871-52107890 | Msa1332190:intron | 40.0% | |
| ! | TTTGCTTGAAGCAGCTTTGA+GGG | + | chr8_4:52107960-52107979 | None:intergenic | 40.0% |
| ! | TTTAGGTTTCCTAGCACTAG+AGG | - | chr8_4:52108053-52108072 | Msa1332190:intron | 40.0% |
| AAAACGACATCCATAGACCT+AGG | + | chr8_4:52108132-52108151 | None:intergenic | 40.0% | |
| CATATAGAAAGAGTTAGCGG+CGG | - | chr8_4:52108170-52108189 | Msa1332190:CDS | 40.0% | |
| ! | TTTTCCATCAGACTAGCAAC+TGG | - | chr8_4:52108447-52108466 | Msa1332190:intron | 40.0% |
| AACAGTGCTCACATCAGAAA+TGG | + | chr8_4:52108567-52108586 | None:intergenic | 40.0% | |
| GAAGACATTGCTCAACGTAA+TGG | - | chr8_4:52108608-52108627 | Msa1332190:intron | 40.0% | |
| ACCGCACTACTATTGTTGAT+TGG | - | chr8_4:52108642-52108661 | Msa1332190:intron | 40.0% | |
| GCCAATCAACAATAGTAGTG+CGG | + | chr8_4:52108646-52108665 | None:intergenic | 40.0% | |
| ! | ACTACTATTGTTGATTGGCC+TGG | - | chr8_4:52108647-52108666 | Msa1332190:intron | 40.0% |
| TGATTACAATGCTGACGTCT+TGG | - | chr8_4:52108697-52108716 | Msa1332190:intron | 40.0% | |
| !! | GGTTGTTTTACTGGACCATA+GGG | + | chr8_4:52108752-52108771 | None:intergenic | 40.0% |
| !! | TGGTTGTTTTACTGGACCAT+AGG | + | chr8_4:52108753-52108772 | None:intergenic | 40.0% |
| TATGGTCCAGTAAAACAACC+AGG | - | chr8_4:52108752-52108771 | Msa1332190:intron | 40.0% | |
| !! | TCAGTACCTGGTTGTTTTAC+TGG | + | chr8_4:52108761-52108780 | None:intergenic | 40.0% |
| AATTGTGCTAAGGGTCTGTT+TGG | - | chr8_4:52109029-52109048 | Msa1332190:intron | 40.0% | |
| TAAAAGACTTAGGGTCCGTT+TGG | + | chr8_4:52109241-52109260 | None:intergenic | 40.0% | |
| AATTCCTAATGTGCTTGGCA+GGG | - | chr8_4:52109286-52109305 | Msa1332190:CDS | 40.0% | |
| ! | ATTGGTGGGTATTAGGAATC+TGG | - | chr8_4:52109340-52109359 | Msa1332190:CDS | 40.0% |
| GTTTCATTGTTGCTGGTACT+TGG | - | chr8_4:52109377-52109396 | Msa1332190:CDS | 40.0% | |
| CATTGAATCGGTGAAAACAG+TGG | + | chr8_4:52109464-52109483 | None:intergenic | 40.0% | |
| ATGACCTCTCCTGTAAATTG+TGG | - | chr8_4:52109585-52109604 | Msa1332190:intron | 40.0% | |
| TGACCTCTCCTGTAAATTGT+GGG | - | chr8_4:52109586-52109605 | Msa1332190:intron | 40.0% | |
| ACTTTGACCCCACAATTTAC+AGG | + | chr8_4:52109597-52109616 | None:intergenic | 40.0% | |
| TTGTTTCCATGCTGGAATCT+CGG | + | chr8_4:52109894-52109913 | None:intergenic | 40.0% | |
| ! | ATAGTACCTTGTTTCCATGC+TGG | + | chr8_4:52109902-52109921 | None:intergenic | 40.0% |
| CCATACCTGTCAAGTTCATA+GGG | + | chr8_4:52110185-52110204 | None:intergenic | 40.0% | |
| ACCATACCTGTCAAGTTCAT+AGG | + | chr8_4:52110186-52110205 | None:intergenic | 40.0% | |
| !! | TCTTCTAAGAGGCACCTTAA+AGG | - | chr8_4:52110205-52110224 | Msa1332190:intron | 40.0% |
| ! | CATGTGATTTGTACTGCGAT+TGG | + | chr8_4:52110286-52110305 | None:intergenic | 40.0% |
| TGCATATCTGCTTTCGACAA+TGG | + | chr8_4:52110339-52110358 | None:intergenic | 40.0% | |
| CCAAATCTGCAAAGAGTTGA+AGG | + | chr8_4:52110445-52110464 | None:intergenic | 40.0% | |
| CCTTCAACTCTTTGCAGATT+TGG | - | chr8_4:52110442-52110461 | Msa1332190:intron | 40.0% | |
| TCAACTCTTTGCAGATTTGG+AGG | - | chr8_4:52110445-52110464 | Msa1332190:intron | 40.0% | |
| CAACTCTTTGCAGATTTGGA+GGG | - | chr8_4:52110446-52110465 | Msa1332190:intron | 40.0% | |
| CAACTAAAGGGTCTCCTAAA+AGG | - | chr8_4:52110492-52110511 | Msa1332190:intron | 40.0% | |
| ! | ATCTCAGCCTTAGACCTTTT+AGG | + | chr8_4:52110509-52110528 | None:intergenic | 40.0% |
| ! | TAAAAGGTCTAAGGCTGAGA+TGG | - | chr8_4:52110508-52110527 | Msa1332190:intron | 40.0% |
| TAAAGGAGTGAGCAAGTTTG+TGG | - | chr8_4:52110547-52110566 | Msa1332190:intron | 40.0% | |
| ! | GTGTCAACTTTTAAGCGACA+GGG | + | chr8_4:52110658-52110677 | None:intergenic | 40.0% |
| ! | TGTGTCAACTTTTAAGCGAC+AGG | + | chr8_4:52110659-52110678 | None:intergenic | 40.0% |
| GTCGCTTAAAAGTTGACACA+TGG | - | chr8_4:52110659-52110678 | Msa1332190:CDS | 40.0% | |
| CACATGGTACTTGTGTATGT+TGG | - | chr8_4:52110675-52110694 | Msa1332190:CDS | 40.0% | |
| ! | GAAAGATAGTAATGGGACCA+AGG | - | chr8_4:52110734-52110753 | Msa1332190:CDS | 40.0% |
| TTGCCAAAATCATTTCCCAC+TGG | - | chr8_4:52110820-52110839 | Msa1332190:five_prime_UTR | 40.0% | |
| ! | AGTCCAGTGGGAAATGATTT+TGG | + | chr8_4:52110826-52110845 | None:intergenic | 40.0% |
| AAGTCAAACATCAGTCCAGT+GGG | + | chr8_4:52110838-52110857 | None:intergenic | 40.0% | |
| AACATGTCGCCTCTAATTTG+TGG | + | chr8_4:52110893-52110912 | None:intergenic | 40.0% | |
| TCTGCTATAGTTCCATTCCG+TGG | - | chr8_4:52107078-52107097 | Msa1332190:three_prime_UTR | 45.0% | |
| AATCAAGGGTAGTTGAAGCC+CGG | + | chr8_4:52107288-52107307 | None:intergenic | 45.0% | |
| CAAAGTTGGATGCCCATTTG+AGG | - | chr8_4:52107482-52107501 | Msa1332190:CDS | 45.0% | |
| TGTGTTGTGTTCCGAATCCA+TGG | - | chr8_4:52107610-52107629 | Msa1332190:CDS | 45.0% | |
| ! | TAGAGAGCATGTTGATGCTC+CGG | - | chr8_4:52107667-52107686 | Msa1332190:CDS | 45.0% |
| TTGATGCACGAGCATCAACA+TGG | + | chr8_4:52107762-52107781 | None:intergenic | 45.0% | |
| ! | TTTCTGGTGTACGGATGAGT+AGG | - | chr8_4:52107851-52107870 | Msa1332190:intron | 45.0% |
| TGCATGTTTGGACTTGACTG+AGG | - | chr8_4:52107883-52107902 | Msa1332190:intron | 45.0% | |
| CTTTGCTTGAAGCAGCTTTG+AGG | + | chr8_4:52107961-52107980 | None:intergenic | 45.0% | |
| CAAAGCTGCTTCAAGCAAAG+TGG | - | chr8_4:52107961-52107980 | Msa1332190:intron | 45.0% | |
| GATTCACAACCTCTAGTGCT+AGG | + | chr8_4:52108065-52108084 | None:intergenic | 45.0% | |
| TGTTGTGTCTCCTAGGTCTA+TGG | - | chr8_4:52108119-52108138 | Msa1332190:CDS | 45.0% | |
| CGCCGCTAACTCTTTCTATA+TGG | + | chr8_4:52108172-52108191 | None:intergenic | 45.0% | |
| GAGTTAGTCGCAACTCCTTT+AGG | + | chr8_4:52108272-52108291 | None:intergenic | 45.0% | |
| CAACTGGCAGTGGAAATTCA+AGG | - | chr8_4:52108463-52108482 | Msa1332190:intron | 45.0% | |
| GGAACATGTGAAGGAGAGTT+CGG | - | chr8_4:52108511-52108530 | Msa1332190:intron | 45.0% | |
| GTGCTCACATCAGAAATGGT+TGG | + | chr8_4:52108563-52108582 | None:intergenic | 45.0% | |
| ! | TTCTGATGTGAGCACTGTTG+AGG | - | chr8_4:52108568-52108587 | Msa1332190:intron | 45.0% |
| !! | ATTGTTGATTGGCCTGGTCT+AGG | - | chr8_4:52108653-52108672 | Msa1332190:intron | 45.0% |
| CGATCAGAATAACCTAGACC+AGG | + | chr8_4:52108668-52108687 | None:intergenic | 45.0% | |
| !! | CAACCAGGTACTGATAGTAG+TGG | - | chr8_4:52108767-52108786 | Msa1332190:intron | 45.0% |
| CAATTCCTAATGTGCTTGGC+AGG | - | chr8_4:52109285-52109304 | Msa1332190:CDS | 45.0% | |
| AAAACCCTGCCAAGCACATT+AGG | + | chr8_4:52109293-52109312 | None:intergenic | 45.0% | |
| ! | AATGTGCTTGGCAGGGTTTT+AGG | - | chr8_4:52109293-52109312 | Msa1332190:CDS | 45.0% |
| ! | ATGTGCTTGGCAGGGTTTTA+GGG | - | chr8_4:52109294-52109313 | Msa1332190:CDS | 45.0% |
| ! | AACAGTGGTTCACGGATTAC+TGG | + | chr8_4:52109449-52109468 | None:intergenic | 45.0% |
| TCGGTGAAAACAGTGGTTCA+CGG | + | chr8_4:52109457-52109476 | None:intergenic | 45.0% | |
| GACCTCTCCTGTAAATTGTG+GGG | - | chr8_4:52109587-52109606 | Msa1332190:intron | 45.0% | |
| GCAACAGCAGCTATAGCTTT+GGG | + | chr8_4:52109835-52109854 | None:intergenic | 45.0% | |
| TGCAACAGCAGCTATAGCTT+TGG | + | chr8_4:52109836-52109855 | None:intergenic | 45.0% | |
| TCGGCCAAATACGATAGGAA+GGG | + | chr8_4:52109875-52109894 | None:intergenic | 45.0% | |
| GAATCTCGGCCAAATACGAT+AGG | + | chr8_4:52109880-52109899 | None:intergenic | 45.0% | |
| GAGATTCCAGCATGGAAACA+AGG | - | chr8_4:52109893-52109912 | Msa1332190:intron | 45.0% | |
| GCTACAGTGATCAATTGGCA+AGG | + | chr8_4:52109955-52109974 | None:intergenic | 45.0% | |
| CCTGTCAAGTTCATAGGGAA+GGG | + | chr8_4:52110180-52110199 | None:intergenic | 45.0% | |
| ACCTGTCAAGTTCATAGGGA+AGG | + | chr8_4:52110181-52110200 | None:intergenic | 45.0% | |
| CCCTATGAACTTGACAGGTA+TGG | - | chr8_4:52110182-52110201 | Msa1332190:intron | 45.0% | |
| GACAGGTATGGTCTTCTAAG+AGG | - | chr8_4:52110194-52110213 | Msa1332190:intron | 45.0% | |
| !! | TGGTGTCACGTTATCAGGAT+TGG | + | chr8_4:52110315-52110334 | None:intergenic | 45.0% |
| TATCTGCTTTCGACAATGGC+TGG | + | chr8_4:52110335-52110354 | None:intergenic | 45.0% | |
| AGAGTTGAAGGAACTCCTCA+CGG | + | chr8_4:52110433-52110452 | None:intergenic | 45.0% | |
| AGGGTCTCCTAAAAGGTCTA+AGG | - | chr8_4:52110499-52110518 | Msa1332190:intron | 45.0% | |
| GCTGAGATGGAAGCTCTTAA+CGG | - | chr8_4:52110521-52110540 | Msa1332190:intron | 45.0% | |
| GAAGCTCTTAACGGAGCTAA+AGG | - | chr8_4:52110530-52110549 | Msa1332190:intron | 45.0% | |
| AAAGCAGGATACTCCTCTTG+TGG | + | chr8_4:52110593-52110612 | None:intergenic | 45.0% | |
| ! | TATGTTGGTGAAGCTTGCAC+AGG | - | chr8_4:52110690-52110709 | Msa1332190:CDS | 45.0% |
| CAAGTCAAACATCAGTCCAG+TGG | + | chr8_4:52110839-52110858 | None:intergenic | 45.0% | |
| !! | TAAATATAAGATTATTTAAT+TGG | + | chr8_4:52108301-52108320 | None:intergenic | 5.0% |
| !! | TTTAATAAATATTTATTATG+AGG | - | chr8_4:52108490-52108509 | Msa1332190:intron | 5.0% |
| !! | GTTGCAGAGAGTGCCATTAG+AGG | + | chr8_4:52107169-52107188 | None:intergenic | 50.0% |
| GTTGAAGCCCGGATCTTCAA+GGG | + | chr8_4:52107277-52107296 | None:intergenic | 50.0% | |
| AGTTGAAGCCCGGATCTTCA+AGG | + | chr8_4:52107278-52107297 | None:intergenic | 50.0% | |
| TGGTGTACGGATGAGTAGGA+AGG | - | chr8_4:52107855-52107874 | Msa1332190:intron | 50.0% | |
| ACTGAGGTTTCCCCACTTGT+GGG | - | chr8_4:52107899-52107918 | Msa1332190:intron | 50.0% | |
| GTCTCTCAATCCCACAAGTG+GGG | + | chr8_4:52107912-52107931 | None:intergenic | 50.0% | |
| CGTCTCTCAATCCCACAAGT+GGG | + | chr8_4:52107913-52107932 | None:intergenic | 50.0% | |
| ACTTGTGGGATTGAGAGACG+CGG | - | chr8_4:52107913-52107932 | Msa1332190:intron | 50.0% | |
| AGAGACGCGGCTTTCACTTT+GGG | - | chr8_4:52107926-52107945 | Msa1332190:intron | 50.0% | |
| ! | ACTGCCAGTTGCTAGTCTGA+TGG | + | chr8_4:52108454-52108473 | None:intergenic | 50.0% |
| ATCAGACTAGCAACTGGCAG+TGG | - | chr8_4:52108453-52108472 | Msa1332190:intron | 50.0% | |
| ! | ATGTGAGCACTGTTGAGGAG+TGG | - | chr8_4:52108573-52108592 | Msa1332190:intron | 50.0% |
| CCTCCACTACTATCAGTACC+TGG | + | chr8_4:52108773-52108792 | None:intergenic | 50.0% | |
| !! | CCAGGTACTGATAGTAGTGG+AGG | - | chr8_4:52108770-52108789 | Msa1332190:intron | 50.0% |
| GACTTAGGGTCCGTTTGGAT+TGG | + | chr8_4:52109236-52109255 | None:intergenic | 50.0% | |
| !!! | TGGCAGGGTTTTAGGGCTTT+TGG | - | chr8_4:52109301-52109320 | Msa1332190:CDS | 50.0% |
| GACCCCACAATTTACAGGAG+AGG | + | chr8_4:52109592-52109611 | None:intergenic | 50.0% | |
| AGTAGTCCGTGCTGCGAAAA+AGG | - | chr8_4:52109798-52109817 | Msa1332190:intron | 50.0% | |
| GTAGTCCGTGCTGCGAAAAA+GGG | - | chr8_4:52109799-52109818 | Msa1332190:intron | 50.0% | |
| GGTCCCCTTCCTATCGTATT+TGG | - | chr8_4:52109868-52109887 | Msa1332190:intron | 50.0% | |
| CGGCCAAATACGATAGGAAG+GGG | + | chr8_4:52109874-52109893 | None:intergenic | 50.0% | |
| CTCGGCCAAATACGATAGGA+AGG | + | chr8_4:52109876-52109895 | None:intergenic | 50.0% | |
| ATTTGGCCGAGATTCCAGCA+TGG | - | chr8_4:52109885-52109904 | Msa1332190:intron | 50.0% | |
| CCCTTCCCTATGAACTTGAC+AGG | - | chr8_4:52110177-52110196 | Msa1332190:intron | 50.0% | |
| !! | ATGGCTGGTGTCACGTTATC+AGG | + | chr8_4:52110320-52110339 | None:intergenic | 50.0% |
| ACTCCTCACGGGATGTTACA+GGG | + | chr8_4:52110421-52110440 | None:intergenic | 50.0% | |
| AACTCCTCACGGGATGTTAC+AGG | + | chr8_4:52110422-52110441 | None:intergenic | 50.0% | |
| GAGTTGAAGGAACTCCTCAC+GGG | + | chr8_4:52110432-52110451 | None:intergenic | 50.0% | |
| !! | AGCAAGTTTGTGGAAGTGCC+TGG | - | chr8_4:52110557-52110576 | Msa1332190:intron | 50.0% |
| !! | TCTTGTGGAAGAAGAGCACC+AGG | + | chr8_4:52110578-52110597 | None:intergenic | 50.0% |
| TGGTGCTCTTCTTCCACAAG+AGG | - | chr8_4:52110577-52110596 | Msa1332190:intron | 50.0% | |
| ! | GGAGTATCCTGCTTTAGTCG+CGG | - | chr8_4:52110598-52110617 | Msa1332190:intron | 50.0% |
| GAATAATGGTAGGGGCCATC+AGG | + | chr8_4:52110999-52111018 | None:intergenic | 50.0% | |
| GACTGAGGTTTCCCCACTTG+TGG | - | chr8_4:52107898-52107917 | Msa1332190:intron | 55.0% | |
| GCGTCTCTCAATCCCACAAG+TGG | + | chr8_4:52107914-52107933 | None:intergenic | 55.0% | |
| GAGAGACGCGGCTTTCACTT+TGG | - | chr8_4:52107925-52107944 | Msa1332190:intron | 55.0% | |
| !! | CCAGACCCTTTTTCGCAGCA+CGG | + | chr8_4:52109807-52109826 | None:intergenic | 55.0% |
| TAGCTGCTGTTGCACCCACT+TGG | - | chr8_4:52109842-52109861 | Msa1332190:intron | 55.0% | |
| !! | ACCTTAAAGGCGCCTGCAGT+TGG | - | chr8_4:52110218-52110237 | Msa1332190:intron | 55.0% |
| !! | CCTTAAAGGCGCCTGCAGTT+GGG | - | chr8_4:52110219-52110238 | Msa1332190:intron | 55.0% |
| TACACCATCCACCCAACTGC+AGG | + | chr8_4:52110233-52110252 | None:intergenic | 55.0% | |
| ! | AGGAGCACGTTACTTACCCG+CGG | - | chr8_4:52110373-52110392 | Msa1332190:intron | 55.0% |
| TTACCCGCGGCTTTCTTGAC+TGG | - | chr8_4:52110386-52110405 | Msa1332190:intron | 55.0% | |
| AGTCCAGTCAAGAAAGCCGC+GGG | + | chr8_4:52110392-52110411 | None:intergenic | 55.0% | |
| GAGTCCAGTCAAGAAAGCCG+CGG | + | chr8_4:52110393-52110412 | None:intergenic | 55.0% | |
| CACGGGATGTTACAGGGTCT+AGG | + | chr8_4:52110415-52110434 | None:intergenic | 55.0% | |
| AGACCCTGTAACATCCCGTG+AGG | - | chr8_4:52110415-52110434 | Msa1332190:intron | 55.0% | |
| AGCTCTTCCGCGACTAAAGC+AGG | + | chr8_4:52110608-52110627 | None:intergenic | 55.0% | |
| ACCCTGTGTGGGTATCCTGA+TGG | - | chr8_4:52110981-52111000 | Msa1332190:five_prime_UTR | 55.0% | |
| GCCATCAGGATACCCACACA+GGG | + | chr8_4:52110985-52111004 | None:intergenic | 55.0% | |
| CCGTGCTGCGAAAAAGGGTC+TGG | - | chr8_4:52109804-52109823 | Msa1332190:intron | 60.0% | |
| GCTGTTGCACCCACTTGGTC+TGG | - | chr8_4:52109847-52109866 | Msa1332190:intron | 60.0% | |
| GGAAGGGGACCAGACCAAGT+GGG | + | chr8_4:52109859-52109878 | None:intergenic | 60.0% | |
| AGGAAGGGGACCAGACCAAG+TGG | + | chr8_4:52109860-52109879 | None:intergenic | 60.0% | |
| CCCAACTGCAGGCGCCTTTA+AGG | + | chr8_4:52110222-52110241 | None:intergenic | 60.0% | |
| !! | TAAAGGCGCCTGCAGTTGGG+TGG | - | chr8_4:52110222-52110241 | Msa1332190:intron | 60.0% |
| GGCCATCAGGATACCCACAC+AGG | + | chr8_4:52110986-52111005 | None:intergenic | 60.0% | |
| GGCGCCTGCAGTTGGGTGGA+TGG | - | chr8_4:52110226-52110245 | Msa1332190:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 52106952 | 52111028 | 52106952 | ID=Msa1332190;Name=Msa1332190 |
| chr8_4 | mRNA | 52106952 | 52111028 | 52106952 | ID=Msa1332190-mRNA-1;Parent=Msa1332190;Name=Msa1332190-mRNA-1;_AED=0.01;_eAED=0.01;_QI=220|1|1|1|1|1|4|361|373 |
| chr8_4 | exon | 52106952 | 52107781 | 52106952 | ID=Msa1332190-mRNA-1:exon:15599;Parent=Msa1332190-mRNA-1 |
| chr8_4 | exon | 52108066 | 52108225 | 52108066 | ID=Msa1332190-mRNA-1:exon:15598;Parent=Msa1332190-mRNA-1 |
| chr8_4 | exon | 52109207 | 52109522 | 52109207 | ID=Msa1332190-mRNA-1:exon:15597;Parent=Msa1332190-mRNA-1 |
| chr8_4 | exon | 52110632 | 52111028 | 52110632 | ID=Msa1332190-mRNA-1:exon:15596;Parent=Msa1332190-mRNA-1 |
| chr8_4 | five_prime_UTR | 52110809 | 52111028 | 52110809 | ID=Msa1332190-mRNA-1:five_prime_utr;Parent=Msa1332190-mRNA-1 |
| chr8_4 | CDS | 52110632 | 52110808 | 52110632 | ID=Msa1332190-mRNA-1:cds;Parent=Msa1332190-mRNA-1 |
| chr8_4 | CDS | 52109207 | 52109522 | 52109207 | ID=Msa1332190-mRNA-1:cds;Parent=Msa1332190-mRNA-1 |
| chr8_4 | CDS | 52108066 | 52108225 | 52108066 | ID=Msa1332190-mRNA-1:cds;Parent=Msa1332190-mRNA-1 |
| chr8_4 | CDS | 52107313 | 52107781 | 52107313 | ID=Msa1332190-mRNA-1:cds;Parent=Msa1332190-mRNA-1 |
| chr8_4 | three_prime_UTR | 52106952 | 52107312 | 52106952 | ID=Msa1332190-mRNA-1:three_prime_utr;Parent=Msa1332190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
