Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332310 | XP_003609465.1 | 96.377 | 690 | 17 | 2 | 1 | 683 | 1 | 689 | 0.0 | 1369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332310 | sp|Q944B6|TYRA1_ARATH | 69.164 | 574 | 165 | 3 | 73 | 641 | 53 | 619 | 0.0 | 826 |
| Msa1332310 | sp|Q944B6|TYRA1_ARATH | 59.236 | 314 | 120 | 3 | 378 | 683 | 44 | 357 | 1.21e-122 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332310 | G7JGK2 | 96.377 | 690 | 17 | 2 | 1 | 683 | 1 | 689 | 0.0 | 1369 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1215630 | Msa1332310 | 0.921356 | 3.975421e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332310 | MtrunA17_Chr4g0064761 | 95.900 | 683 | 23 | 2 | 1 | 683 | 1 | 678 | 0.0 | 1346 |
| Msa1332310 | MtrunA17_Chr3g0114251 | 53.846 | 260 | 116 | 2 | 381 | 640 | 2 | 257 | 1.61e-92 | 288 |
| Msa1332310 | MtrunA17_Chr3g0114251 | 51.154 | 260 | 123 | 1 | 69 | 328 | 4 | 259 | 7.23e-91 | 283 |
| Msa1332310 | MtrunA17_Chr5g0437781 | 54.440 | 259 | 113 | 3 | 383 | 640 | 3 | 257 | 5.95e-92 | 286 |
| Msa1332310 | MtrunA17_Chr5g0437781 | 51.341 | 261 | 122 | 2 | 69 | 328 | 3 | 259 | 8.73e-90 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332310 | AT5G34930.1 | 69.164 | 574 | 165 | 3 | 73 | 641 | 53 | 619 | 0.0 | 826 |
| Msa1332310 | AT5G34930.1 | 59.236 | 314 | 120 | 3 | 378 | 683 | 44 | 357 | 1.22e-123 | 382 |
| Msa1332310 | AT5G34930.3 | 66.016 | 615 | 183 | 5 | 35 | 641 | 3 | 599 | 0.0 | 826 |
| Msa1332310 | AT5G34930.3 | 59.236 | 314 | 120 | 3 | 378 | 683 | 24 | 337 | 6.20e-124 | 382 |
| Msa1332310 | AT5G34930.2 | 69.164 | 574 | 165 | 3 | 73 | 641 | 75 | 641 | 0.0 | 825 |
| Msa1332310 | AT5G34930.2 | 59.236 | 314 | 120 | 3 | 378 | 683 | 66 | 379 | 3.32e-123 | 381 |
| Msa1332310 | AT1G15710.1 | 61.145 | 332 | 118 | 2 | 9 | 340 | 6 | 326 | 1.51e-143 | 423 |
| Msa1332310 | AT1G15710.1 | 62.126 | 301 | 106 | 1 | 352 | 652 | 32 | 324 | 2.99e-137 | 407 |
Find 145 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTCAATCAAGAACTTT+TGG | 0.201746 | 8_4:-52303651 | None:intergenic |
| TCATATCCCTTTGTGTCTAT+TGG | 0.228324 | 8_4:-52303235 | None:intergenic |
| CCAAAAGTTCTTGATTGAAA+TGG | 0.231597 | 8_4:+52303651 | Msa1332310:three_prime_UTR |
| CTCTGATGTGGCTCGGGAAT+TGG | 0.233298 | 8_4:+52302745 | Msa1332310:CDS |
| AACCATTCGGCACCCTTCTT+TGG | 0.240904 | 8_4:-52303113 | None:intergenic |
| GTATGAATCTTTGTTGAATT+TGG | 0.242967 | 8_4:+52301725 | Msa1332310:CDS |
| CTCTGTACTCACCCTATGTT+TGG | 0.243282 | 8_4:+52302977 | Msa1332310:CDS |
| GTGGAATTGAAGTGCGATTT+TGG | 0.268541 | 8_4:-52301082 | None:intergenic |
| ACATACTGTTGGTAGGGTTT+TGG | 0.269241 | 8_4:+52301662 | Msa1332310:CDS |
| TGTTGAAGAAACAAGTTTCT+AGG | 0.270162 | 8_4:-52302932 | None:intergenic |
| TGCTGTAAAGGTCCAATCTT+TGG | 0.274778 | 8_4:+52301911 | Msa1332310:CDS |
| TATGTTTAATAAGAATTCTT+TGG | 0.276415 | 8_4:+52301794 | Msa1332310:CDS |
| ATTGAAATGGGAAAACAAAA+AGG | 0.277994 | 8_4:+52303664 | Msa1332310:three_prime_UTR |
| ATATGAAACTTTATTAAGTT+TGG | 0.287803 | 8_4:+52303252 | Msa1332310:CDS |
| AAAATTGCAATCATTGGTTT+TGG | 0.292029 | 8_4:+52302647 | Msa1332310:CDS |
| TCATACCCTTTAGTATTAAT+AGG | 0.314028 | 8_4:-52301708 | None:intergenic |
| AAACTCAAAATCGCTATTAT+CGG | 0.315533 | 8_4:+52301114 | Msa1332310:CDS |
| GTGCAAAGTAAAATCACTTC+TGG | 0.317402 | 8_4:-52302812 | None:intergenic |
| GATAGCTTTGATCTGTACTA+TGG | 0.319128 | 8_4:+52303292 | Msa1332310:CDS |
| AAGCTCAAAATTGCAATCAT+TGG | 0.331375 | 8_4:+52302641 | Msa1332310:CDS |
| CAAAAGTTCTTGATTGAAAT+GGG | 0.335205 | 8_4:+52303652 | Msa1332310:three_prime_UTR |
| ATTTGTTCGCATCCTATGTT+TGG | 0.336142 | 8_4:+52301450 | Msa1332310:CDS |
| GTCAGAAAGCATGGTCAAAA+TGG | 0.341124 | 8_4:+52301954 | Msa1332310:CDS |
| TCTGATGTGGCTCGGGAATT+GGG | 0.343949 | 8_4:+52302746 | Msa1332310:CDS |
| TAAGAATTCTTTGGAGATGT+TGG | 0.349313 | 8_4:+52301803 | Msa1332310:CDS |
| TATTACAGATCAAATGGTTC+TGG | 0.351997 | 8_4:+52302599 | Msa1332310:CDS |
| TTTGGAGATGTTGGAGAGGT+TGG | 0.355291 | 8_4:+52301812 | Msa1332310:CDS |
| CAGCCATTGCTTCCACTCTC+AGG | 0.359401 | 8_4:-52301474 | None:intergenic |
| TTAAGTTTGGTGGAGAATAC+TGG | 0.361358 | 8_4:+52303265 | Msa1332310:CDS |
| GATGTTGGAGAGGTTGGATT+TGG | 0.372198 | 8_4:+52301818 | Msa1332310:CDS |
| TTGTAATTTGTAATTGTAGT+AGG | 0.372848 | 8_4:+52303561 | Msa1332310:three_prime_UTR |
| TCGCAGAGATCATCGGCGTT+AGG | 0.389198 | 8_4:-52301255 | None:intergenic |
| TGTTATCAGCACCCAAAGAT+TGG | 0.393776 | 8_4:-52301923 | None:intergenic |
| CGCAGAGATCATCGGCGTTA+GGG | 0.394910 | 8_4:-52301254 | None:intergenic |
| AAAATCGCTATTATCGGTTT+CGG | 0.397516 | 8_4:+52301120 | Msa1332310:CDS |
| CTCCGTTTGAGTCGTTGAAA+TGG | 0.411619 | 8_4:-52301345 | None:intergenic |
| TTGAGCGACGGCGGAGTAAT+CGG | 0.417633 | 8_4:-52301211 | None:intergenic |
| CATGGTTATTACAGATCAAA+TGG | 0.428810 | 8_4:+52302593 | Msa1332310:CDS |
| TCTGTACTCACCCTATGTTT+GGG | 0.429958 | 8_4:+52302978 | Msa1332310:CDS |
| CTTGATGTGTTTGGAAGAGA+AGG | 0.431338 | 8_4:+52301573 | Msa1332310:CDS |
| CCACTCTCTGGCCCAAACAT+AGG | 0.433260 | 8_4:-52302989 | None:intergenic |
| GTGCATAGAAGAATAACTTC+AGG | 0.435524 | 8_4:-52301285 | None:intergenic |
| TTCGATAGATACCATGTAAA+CGG | 0.435811 | 8_4:-52303399 | None:intergenic |
| CAAATTATATCGAAATAATT+CGG | 0.437847 | 8_4:-52301432 | None:intergenic |
| GTACAGAGAACATCAAAATA+AGG | 0.438400 | 8_4:-52302962 | None:intergenic |
| GAGAAGTTTCTTGATGTGTT+TGG | 0.438958 | 8_4:+52301564 | Msa1332310:CDS |
| GCAACTGCAAAGATTTGATC+TGG | 0.440411 | 8_4:+52303345 | Msa1332310:CDS |
| TGAAACTTTATTAAGTTTGG+TGG | 0.443320 | 8_4:+52303255 | Msa1332310:CDS |
| GGGGAAATGGAGATGGAGAA+TGG | 0.450126 | 8_4:-52300982 | None:intergenic |
| CACATGACATTTCAACCATT+CGG | 0.455410 | 8_4:-52303126 | None:intergenic |
| TCATTACACATACTGTTGGT+AGG | 0.455467 | 8_4:+52301655 | Msa1332310:CDS |
| AGAATGGAAATGTAGGGTTC+AGG | 0.458510 | 8_4:-52300966 | None:intergenic |
| GTCAATTGCGCGAATGGTGA+GGG | 0.458607 | 8_4:-52301034 | None:intergenic |
| CTACACCTATTAATACTAAA+GGG | 0.461298 | 8_4:+52301703 | Msa1332310:CDS |
| AGCGGCATGCCAATCATGTT+CGG | 0.467134 | 8_4:-52303149 | None:intergenic |
| GACCATGCTTTCTGACTACA+TGG | 0.468910 | 8_4:-52301947 | None:intergenic |
| GAATTGGGAACGATGAAACT+AGG | 0.469059 | 8_4:+52301529 | Msa1332310:CDS |
| GTGGTGGAACGGTTGAAAGA+GGG | 0.473021 | 8_4:-52301003 | None:intergenic |
| TCATATAGCATCCACGGCAT+TGG | 0.473233 | 8_4:-52303518 | None:intergenic |
| GCTGTAAAGGTCCAATCTTT+GGG | 0.475005 | 8_4:+52301912 | Msa1332310:CDS |
| ACATGGTATCTATCGAAAAC+AGG | 0.478214 | 8_4:+52303405 | Msa1332310:CDS |
| GAGATGGAGAATGGAAATGT+AGG | 0.479315 | 8_4:-52300973 | None:intergenic |
| TTCCATTTCAACGACTCAAA+CGG | 0.483623 | 8_4:+52301343 | Msa1332310:CDS |
| TCTACACCTATTAATACTAA+AGG | 0.484629 | 8_4:+52301702 | Msa1332310:CDS |
| CTGAGAGTGGAAGCAATGGC+TGG | 0.485617 | 8_4:+52301475 | Msa1332310:CDS |
| GTTGTTTGAGGATGCTGTAA+AGG | 0.489972 | 8_4:+52301899 | Msa1332310:CDS |
| TGTGAGGAAGCAGTTGTTTG+AGG | 0.491108 | 8_4:+52301887 | Msa1332310:CDS |
| CTACTGTCTTCTGATTTCTC+AGG | 0.493221 | 8_4:-52303478 | None:intergenic |
| CGTTGACGTTCTTTCAGTCA+AGG | 0.493383 | 8_4:+52301377 | Msa1332310:CDS |
| CACTCTCTGGCCCAAACATA+GGG | 0.495304 | 8_4:-52302988 | None:intergenic |
| TACAAATTACAAGTAAATCA+TGG | 0.495586 | 8_4:-52303550 | None:intergenic |
| TCAGGCAACATAGATCTCTC+TGG | 0.497335 | 8_4:-52303460 | None:intergenic |
| CATTGCCTATGCAGAGGTTG+AGG | 0.497467 | 8_4:+52302867 | Msa1332310:CDS |
| CATTACACATACTGTTGGTA+GGG | 0.500312 | 8_4:+52301656 | Msa1332310:CDS |
| CGTCAATTGCGCGAATGGTG+AGG | 0.500696 | 8_4:-52301035 | None:intergenic |
| TAGATCTCTCTGGAAAATCA+TGG | 0.506679 | 8_4:-52303450 | None:intergenic |
| TCTGTAATAACCATGTAGTC+TGG | 0.508555 | 8_4:-52302585 | None:intergenic |
| GACGGCGGAGTAATCGGAAC+GGG | 0.514757 | 8_4:-52301205 | None:intergenic |
| TCTGCTGATGCCAGACTACA+TGG | 0.514877 | 8_4:+52302575 | Msa1332310:CDS |
| AGACTACTCTGATGTGGCTC+GGG | 0.516024 | 8_4:+52302739 | Msa1332310:CDS |
| CTAAGACAGTGTGACCTTGA+CGG | 0.516715 | 8_4:-52301176 | None:intergenic |
| TTTGAACGACGGTGAGTGGA+AGG | 0.519334 | 8_4:-52300917 | None:intergenic |
| GAACATGATTGGCATGCCGC+TGG | 0.521901 | 8_4:+52303151 | Msa1332310:CDS |
| AGTGGAAGCAATGGCTGGAA+AGG | 0.522855 | 8_4:+52301480 | Msa1332310:CDS |
| AACATACAAACAGAAATAGC+AGG | 0.524133 | 8_4:-52303585 | None:intergenic |
| TGTCATGTGCCGAACATGAT+TGG | 0.533227 | 8_4:+52303140 | Msa1332310:CDS |
| GGTGGTGGAACGGTTGAAAG+AGG | 0.534027 | 8_4:-52301004 | None:intergenic |
| TGCTGCGTCAATTGCGCGAA+TGG | 0.534393 | 8_4:-52301040 | None:intergenic |
| ACGATGAAACTAGGGTTTCA+AGG | 0.536461 | 8_4:+52301538 | Msa1332310:CDS |
| TGCATAGAAGAATAACTTCA+GGG | 0.543778 | 8_4:-52301284 | None:intergenic |
| AGATGGAGAATGGAAATGTA+GGG | 0.544501 | 8_4:-52300972 | None:intergenic |
| TGGTGGAACGGTTGAAAGAG+GGG | 0.545036 | 8_4:-52301002 | None:intergenic |
| TTATTTGATAAAGTCAGAGT+AGG | 0.545161 | 8_4:+52303040 | Msa1332310:CDS |
| CCTATGTTTGGGCCAGAGAG+TGG | 0.548339 | 8_4:+52302989 | Msa1332310:CDS |
| CTTGTATAATATAAATGCCA+TGG | 0.549937 | 8_4:+52303321 | Msa1332310:CDS |
| AATTGGGAACGATGAAACTA+GGG | 0.555673 | 8_4:+52301530 | Msa1332310:CDS |
| CCACTCTCAGGTCCAAACAT+AGG | 0.557184 | 8_4:-52301462 | None:intergenic |
| AAATCTTTGCAGTTGCTCCA+TGG | 0.565501 | 8_4:-52303338 | None:intergenic |
| CAGACTACTCTGATGTGGCT+CGG | 0.566298 | 8_4:+52302738 | Msa1332310:CDS |
| ATTATCGGTTTCGGTAACTT+CGG | 0.570509 | 8_4:+52301129 | Msa1332310:CDS |
| AACCATGTAGTCAGAAAGCA+TGG | 0.573697 | 8_4:+52301945 | Msa1332310:CDS |
| TCAATTTCATATAGCATCCA+CGG | 0.574274 | 8_4:-52303524 | None:intergenic |
| GATCATGATAGATATGCAGC+TGG | 0.574527 | 8_4:+52301624 | Msa1332310:CDS |
| AAGAGAAGGGTGTAGAATGG+TGG | 0.576047 | 8_4:+52301587 | Msa1332310:CDS |
| CAATTCATTACACATACTGT+TGG | 0.577842 | 8_4:+52301651 | Msa1332310:CDS |
| GTGTTCTTCGCAGAGATCAT+CGG | 0.583978 | 8_4:-52301262 | None:intergenic |
| GCTTTGTGCTGTCATCCGAC+TGG | 0.586815 | 8_4:-52302622 | None:intergenic |
| ATCAAATGGTTCTGGCCAGT+CGG | 0.589790 | 8_4:+52302607 | Msa1332310:CDS |
| CCTATGTTTGGACCTGAGAG+TGG | 0.590378 | 8_4:+52301462 | Msa1332310:CDS |
| GGTGGAACGGTTGAAAGAGG+GGG | 0.590460 | 8_4:-52301001 | None:intergenic |
| TGGAAGAGAAGGGTGTAGAA+TGG | 0.591930 | 8_4:+52301584 | Msa1332310:CDS |
| AATTTGGTTGAGAATACTAG+TGG | 0.592301 | 8_4:+52301741 | Msa1332310:CDS |
| TTAAATCATTGCCTATGCAG+AGG | 0.592977 | 8_4:+52302861 | Msa1332310:CDS |
| GCTACCACCTTCGTCCGTCA+AGG | 0.594547 | 8_4:+52301162 | Msa1332310:CDS |
| CTTCTCCTCAACCTCTGCAT+AGG | 0.596192 | 8_4:-52302872 | None:intergenic |
| GTTTGGTGGAGAATACTGGT+GGG | 0.596701 | 8_4:+52303269 | Msa1332310:CDS |
| TCACCAACCGTCAAAATGCT+CGG | 0.598728 | 8_4:+52300886 | None:intergenic |
| GCAACACCAATAGACACAAA+GGG | 0.602309 | 8_4:+52303229 | Msa1332310:CDS |
| ATTTGGTTGAGAATACTAGT+GGG | 0.602707 | 8_4:+52301742 | Msa1332310:CDS |
| AGTTTGGTGGAGAATACTGG+TGG | 0.605516 | 8_4:+52303268 | Msa1332310:CDS |
| TTCCAAAGAAGGGTGCCGAA+TGG | 0.611629 | 8_4:+52303111 | Msa1332310:CDS |
| GGCAACACCAATAGACACAA+AGG | 0.612817 | 8_4:+52303228 | Msa1332310:CDS |
| TGTAGGGTTCAGGCGAGTGG+TGG | 0.616210 | 8_4:-52300956 | None:intergenic |
| CAGTTTATCACACATACCAC+AGG | 0.621402 | 8_4:+52303178 | Msa1332310:CDS |
| CTCATTTGCATGATGTTGTG+AGG | 0.622338 | 8_4:+52301871 | Msa1332310:CDS |
| ATTCTTTGGAGATGTTGGAG+AGG | 0.622927 | 8_4:+52301808 | Msa1332310:CDS |
| TCCGCCGTCGCTCAAAACAT+CGG | 0.622986 | 8_4:+52301219 | Msa1332310:CDS |
| TCAATTGCGCGAATGGTGAG+GGG | 0.623028 | 8_4:-52301033 | None:intergenic |
| TTGATGTGTTTGGAAGAGAA+GGG | 0.623550 | 8_4:+52301574 | Msa1332310:CDS |
| TTTGGTTGAGAATACTAGTG+GGG | 0.627485 | 8_4:+52301743 | Msa1332310:CDS |
| AAATGTAGGGTTCAGGCGAG+TGG | 0.630231 | 8_4:-52300959 | None:intergenic |
| CAGAGAACATCAAAATAAGG+TGG | 0.631350 | 8_4:-52302959 | None:intergenic |
| GACGGACGAAGGTGGTAGCG+AGG | 0.642414 | 8_4:-52301158 | None:intergenic |
| CGAGTGGTGGTTGAATGCGA+CGG | 0.646540 | 8_4:-52300943 | None:intergenic |
| TAGAACAGACTACTCTGATG+TGG | 0.648768 | 8_4:+52302733 | Msa1332310:CDS |
| ATCATGATAGATATGCAGCT+GGG | 0.652229 | 8_4:+52301625 | Msa1332310:CDS |
| ACATACAAACAGAAATAGCA+GGG | 0.653757 | 8_4:-52303584 | None:intergenic |
| TTTGGTGGAGAATACTGGTG+GGG | 0.654521 | 8_4:+52303270 | Msa1332310:CDS |
| GGACCTGAGAGTGGAAGCAA+TGG | 0.666958 | 8_4:+52301471 | Msa1332310:CDS |
| CGACGGCGGAGTAATCGGAA+CGG | 0.668802 | 8_4:-52301206 | None:intergenic |
| AGTGTGACCTTGACGGACGA+AGG | 0.671002 | 8_4:-52301169 | None:intergenic |
| GTGACCTTGACGGACGAAGG+TGG | 0.676721 | 8_4:-52301166 | None:intergenic |
| GAGATGAATCAAGAATATTG+CGG | 0.703500 | 8_4:+52303065 | Msa1332310:CDS |
| GAAATCAGAAGACAGTAGTG+TGG | 0.713102 | 8_4:+52303483 | Msa1332310:CDS |
| TGTGATAAACTGTGATCCAG+CGG | 0.727709 | 8_4:-52303167 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTATATCGAAATAATT+CGG | - | chr8_4:52301435-52301454 | None:intergenic | 15.0% |
| !! | TATGTTTAATAAGAATTCTT+TGG | + | chr8_4:52301794-52301813 | Msa1332310:CDS | 15.0% |
| !! | ATATGAAACTTTATTAAGTT+TGG | + | chr8_4:52303252-52303271 | Msa1332310:CDS | 15.0% |
| !!! | ATTTCGAGAAAAAAGTTTTT+GGG | - | chr8_4:52301408-52301427 | None:intergenic | 20.0% |
| !!! | AATTTCGAGAAAAAAGTTTT+TGG | - | chr8_4:52301409-52301428 | None:intergenic | 20.0% |
| !!! | GATAGTTTTGATCTTTATTA+TGG | + | chr8_4:52301765-52301784 | Msa1332310:CDS | 20.0% |
| !! | CTGACTTTATCAAATAAAAA+AGG | - | chr8_4:52303037-52303056 | None:intergenic | 20.0% |
| !!! | ATTTTTAGAAAAACTGAAGT+TGG | + | chr8_4:52303204-52303223 | Msa1332310:CDS | 20.0% |
| !! | TACAAATTACAAGTAAATCA+TGG | - | chr8_4:52303553-52303572 | None:intergenic | 20.0% |
| !!! | TTGTAATTTGTAATTGTAGT+AGG | + | chr8_4:52303561-52303580 | Msa1332310:three_prime_UTR | 20.0% |
| ! | AAACTCAAAATCGCTATTAT+CGG | + | chr8_4:52301114-52301133 | Msa1332310:CDS | 25.0% |
| ! | TTTACGAAAAAGTTCGAATT+GGG | + | chr8_4:52301514-52301533 | Msa1332310:CDS | 25.0% |
| ! | TCTACACCTATTAATACTAA+AGG | + | chr8_4:52301702-52301721 | Msa1332310:CDS | 25.0% |
| ! | CTACACCTATTAATACTAAA+GGG | + | chr8_4:52301703-52301722 | Msa1332310:CDS | 25.0% |
| ! | TCATACCCTTTAGTATTAAT+AGG | - | chr8_4:52301711-52301730 | None:intergenic | 25.0% |
| ! | GTATGAATCTTTGTTGAATT+TGG | + | chr8_4:52301725-52301744 | Msa1332310:CDS | 25.0% |
| ! | AGCTTATTTCATAAATGTCA+GGG | - | chr8_4:52302183-52302202 | None:intergenic | 25.0% |
| ! | TGTTGTTCTTTCATATGAAT+TGG | + | chr8_4:52302361-52302380 | Msa1332310:intron | 25.0% |
| ! | ATTCAAAATGAGTAACAAGT+AGG | + | chr8_4:52302433-52302452 | Msa1332310:intron | 25.0% |
| ! | TAGGTAATAATGACCATTTA+TGG | + | chr8_4:52302452-52302471 | Msa1332310:intron | 25.0% |
| !!! | AAAATTGCAATCATTGGTTT+TGG | + | chr8_4:52302647-52302666 | Msa1332310:CDS | 25.0% |
| ! | TTATTTGATAAAGTCAGAGT+AGG | + | chr8_4:52303040-52303059 | Msa1332310:CDS | 25.0% |
| !!! | TTGACATTTTTTCCAAAGAA+GGG | + | chr8_4:52303101-52303120 | Msa1332310:CDS | 25.0% |
| !!! | TTTTTCTAAAAATCTTCCTG+TGG | - | chr8_4:52303197-52303216 | None:intergenic | 25.0% |
| ! | TGAAACTTTATTAAGTTTGG+TGG | + | chr8_4:52303255-52303274 | Msa1332310:CDS | 25.0% |
| ! | CTTGTATAATATAAATGCCA+TGG | + | chr8_4:52303321-52303340 | Msa1332310:CDS | 25.0% |
| ! | CAAAAGTTCTTGATTGAAAT+GGG | + | chr8_4:52303652-52303671 | Msa1332310:three_prime_UTR | 25.0% |
| ! | ATTGAAATGGGAAAACAAAA+AGG | + | chr8_4:52303664-52303683 | Msa1332310:three_prime_UTR | 25.0% |
| !!! | TTTTGAGTTTTTGAGAGTTG+TGG | - | chr8_4:52301104-52301123 | None:intergenic | 30.0% |
| !! | AAAATCGCTATTATCGGTTT+CGG | + | chr8_4:52301120-52301139 | Msa1332310:CDS | 30.0% |
| TGCATAGAAGAATAACTTCA+GGG | - | chr8_4:52301287-52301306 | None:intergenic | 30.0% | |
| !!! | CGAACTTTTTCGTAAACAAA+AGG | - | chr8_4:52301510-52301529 | None:intergenic | 30.0% |
| GTTTACGAAAAAGTTCGAAT+TGG | + | chr8_4:52301513-52301532 | Msa1332310:CDS | 30.0% | |
| CAATTCATTACACATACTGT+TGG | + | chr8_4:52301651-52301670 | Msa1332310:CDS | 30.0% | |
| AATTTGGTTGAGAATACTAG+TGG | + | chr8_4:52301741-52301760 | Msa1332310:CDS | 30.0% | |
| ATTTGGTTGAGAATACTAGT+GGG | + | chr8_4:52301742-52301761 | Msa1332310:CDS | 30.0% | |
| ! | TAAGAATTCTTTGGAGATGT+TGG | + | chr8_4:52301803-52301822 | Msa1332310:CDS | 30.0% |
| ! | AAATGAACACCTCTGATTTT+TGG | - | chr8_4:52302000-52302019 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTCATCCAAACA+GGG | - | chr8_4:52302068-52302087 | None:intergenic | 30.0% |
| ! | ATTAAGTTGTTCATCCAAAC+AGG | - | chr8_4:52302069-52302088 | None:intergenic | 30.0% |
| CAGCTTATTTCATAAATGTC+AGG | - | chr8_4:52302184-52302203 | None:intergenic | 30.0% | |
| !!! | TCTGTTTTGTTATTCTTGTG+CGG | + | chr8_4:52302272-52302291 | Msa1332310:intron | 30.0% |
| TCATATGAATTGGATATGCT+TGG | + | chr8_4:52302371-52302390 | Msa1332310:intron | 30.0% | |
| TCTTAAATGCTCTCCATAAA+TGG | - | chr8_4:52302468-52302487 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTTGTTACTTGCG+AGG | + | chr8_4:52302498-52302517 | Msa1332310:intron | 30.0% |
| CATGGTTATTACAGATCAAA+TGG | + | chr8_4:52302593-52302612 | Msa1332310:CDS | 30.0% | |
| TATTACAGATCAAATGGTTC+TGG | + | chr8_4:52302599-52302618 | Msa1332310:CDS | 30.0% | |
| AAGCTCAAAATTGCAATCAT+TGG | + | chr8_4:52302641-52302660 | Msa1332310:CDS | 30.0% | |
| CAAAAACTATTGTACGTCAT+GGG | + | chr8_4:52302690-52302709 | Msa1332310:CDS | 30.0% | |
| TGTTGAAGAAACAAGTTTCT+AGG | - | chr8_4:52302935-52302954 | None:intergenic | 30.0% | |
| GTACAGAGAACATCAAAATA+AGG | - | chr8_4:52302965-52302984 | None:intergenic | 30.0% | |
| GAGATGAATCAAGAATATTG+CGG | + | chr8_4:52303065-52303084 | Msa1332310:CDS | 30.0% | |
| !!! | CTTGACATTTTTTCCAAAGA+AGG | + | chr8_4:52303100-52303119 | Msa1332310:CDS | 30.0% |
| TTTAGAAAAACTGAAGTTGG+AGG | + | chr8_4:52303207-52303226 | Msa1332310:CDS | 30.0% | |
| TTCGATAGATACCATGTAAA+CGG | - | chr8_4:52303402-52303421 | None:intergenic | 30.0% | |
| TCAATTTCATATAGCATCCA+CGG | - | chr8_4:52303527-52303546 | None:intergenic | 30.0% | |
| ACATACAAACAGAAATAGCA+GGG | - | chr8_4:52303587-52303606 | None:intergenic | 30.0% | |
| AACATACAAACAGAAATAGC+AGG | - | chr8_4:52303588-52303607 | None:intergenic | 30.0% | |
| !! | TCAAGAACTTTTGGAAAGAT+TGG | - | chr8_4:52303645-52303664 | None:intergenic | 30.0% |
| ! | CCATTTCAATCAAGAACTTT+TGG | - | chr8_4:52303654-52303673 | None:intergenic | 30.0% |
| CCAAAAGTTCTTGATTGAAA+TGG | + | chr8_4:52303651-52303670 | Msa1332310:three_prime_UTR | 30.0% | |
| AGATGGAGAATGGAAATGTA+GGG | - | chr8_4:52300975-52300994 | None:intergenic | 35.0% | |
| !! | ATTATCGGTTTCGGTAACTT+CGG | + | chr8_4:52301129-52301148 | Msa1332310:CDS | 35.0% |
| GTGCATAGAAGAATAACTTC+AGG | - | chr8_4:52301288-52301307 | None:intergenic | 35.0% | |
| TTCCATTTCAACGACTCAAA+CGG | + | chr8_4:52301343-52301362 | Msa1332310:CDS | 35.0% | |
| ATTTGTTCGCATCCTATGTT+TGG | + | chr8_4:52301450-52301469 | Msa1332310:CDS | 35.0% | |
| AATTGGGAACGATGAAACTA+GGG | + | chr8_4:52301530-52301549 | Msa1332310:CDS | 35.0% | |
| GAGAAGTTTCTTGATGTGTT+TGG | + | chr8_4:52301564-52301583 | Msa1332310:CDS | 35.0% | |
| TTGATGTGTTTGGAAGAGAA+GGG | + | chr8_4:52301574-52301593 | Msa1332310:CDS | 35.0% | |
| ATCATGATAGATATGCAGCT+GGG | + | chr8_4:52301625-52301644 | Msa1332310:CDS | 35.0% | |
| TCATTACACATACTGTTGGT+AGG | + | chr8_4:52301655-52301674 | Msa1332310:CDS | 35.0% | |
| CATTACACATACTGTTGGTA+GGG | + | chr8_4:52301656-52301675 | Msa1332310:CDS | 35.0% | |
| TTTGGTTGAGAATACTAGTG+GGG | + | chr8_4:52301743-52301762 | Msa1332310:CDS | 35.0% | |
| !!! | ATTTGGCTTTTGAGGATTTG+AGG | + | chr8_4:52301835-52301854 | Msa1332310:CDS | 35.0% |
| TGTTATCCTCCAAAAATCAG+AGG | + | chr8_4:52301988-52302007 | Msa1332310:intron | 35.0% | |
| !!! | CTGTTTTGTTATTCTTGTGC+GGG | + | chr8_4:52302273-52302292 | Msa1332310:intron | 35.0% |
| !! | TATGCTTGGTCTTAATGTGA+TGG | + | chr8_4:52302385-52302404 | Msa1332310:intron | 35.0% |
| !!! | CGAGGTTGTTGTTTTAAATC+TGG | + | chr8_4:52302516-52302535 | Msa1332310:intron | 35.0% |
| TCTGTAATAACCATGTAGTC+TGG | - | chr8_4:52302588-52302607 | None:intergenic | 35.0% | |
| !!! | ATCATTGGTTTTGGCAACTT+TGG | + | chr8_4:52302656-52302675 | Msa1332310:CDS | 35.0% |
| ! | GACGTACAATAGTTTTTGCA+AGG | - | chr8_4:52302688-52302707 | None:intergenic | 35.0% |
| GCAAAAACTATTGTACGTCA+TGG | + | chr8_4:52302689-52302708 | Msa1332310:CDS | 35.0% | |
| GTGCAAAGTAAAATCACTTC+TGG | - | chr8_4:52302815-52302834 | None:intergenic | 35.0% | |
| TTAAATCATTGCCTATGCAG+AGG | + | chr8_4:52302861-52302880 | Msa1332310:CDS | 35.0% | |
| CAGAGAACATCAAAATAAGG+TGG | - | chr8_4:52302962-52302981 | None:intergenic | 35.0% | |
| CACATGACATTTCAACCATT+CGG | - | chr8_4:52303129-52303148 | None:intergenic | 35.0% | |
| TCATATCCCTTTGTGTCTAT+TGG | - | chr8_4:52303238-52303257 | None:intergenic | 35.0% | |
| ! | TTAAGTTTGGTGGAGAATAC+TGG | + | chr8_4:52303265-52303284 | Msa1332310:CDS | 35.0% |
| !! | GATAGCTTTGATCTGTACTA+TGG | + | chr8_4:52303292-52303311 | Msa1332310:CDS | 35.0% |
| ACATGGTATCTATCGAAAAC+AGG | + | chr8_4:52303405-52303424 | Msa1332310:CDS | 35.0% | |
| ! | TAGATCTCTCTGGAAAATCA+TGG | - | chr8_4:52303453-52303472 | None:intergenic | 35.0% |
| AGAATGGAAATGTAGGGTTC+AGG | - | chr8_4:52300969-52300988 | None:intergenic | 40.0% | |
| GAGATGGAGAATGGAAATGT+AGG | - | chr8_4:52300976-52300995 | None:intergenic | 40.0% | |
| ! | GTGGAATTGAAGTGCGATTT+TGG | - | chr8_4:52301085-52301104 | None:intergenic | 40.0% |
| GAATTGGGAACGATGAAACT+AGG | + | chr8_4:52301529-52301548 | Msa1332310:CDS | 40.0% | |
| ACGATGAAACTAGGGTTTCA+AGG | + | chr8_4:52301538-52301557 | Msa1332310:CDS | 40.0% | |
| CTTGATGTGTTTGGAAGAGA+AGG | + | chr8_4:52301573-52301592 | Msa1332310:CDS | 40.0% | |
| GATCATGATAGATATGCAGC+TGG | + | chr8_4:52301624-52301643 | Msa1332310:CDS | 40.0% | |
| !! | ACATACTGTTGGTAGGGTTT+TGG | + | chr8_4:52301662-52301681 | Msa1332310:CDS | 40.0% |
| !! | CATACTGTTGGTAGGGTTTT+GGG | + | chr8_4:52301663-52301682 | Msa1332310:CDS | 40.0% |
| !!! | GGTTTTGGGTATGTTGATGT+TGG | + | chr8_4:52301677-52301696 | Msa1332310:CDS | 40.0% |
| ! | ATTCTTTGGAGATGTTGGAG+AGG | + | chr8_4:52301808-52301827 | Msa1332310:CDS | 40.0% |
| CTCATTTGCATGATGTTGTG+AGG | + | chr8_4:52301871-52301890 | Msa1332310:CDS | 40.0% | |
| GTTGTTTGAGGATGCTGTAA+AGG | + | chr8_4:52301899-52301918 | Msa1332310:CDS | 40.0% | |
| TGCTGTAAAGGTCCAATCTT+TGG | + | chr8_4:52301911-52301930 | Msa1332310:CDS | 40.0% | |
| GCTGTAAAGGTCCAATCTTT+GGG | + | chr8_4:52301912-52301931 | Msa1332310:CDS | 40.0% | |
| TGTTATCAGCACCCAAAGAT+TGG | - | chr8_4:52301926-52301945 | None:intergenic | 40.0% | |
| AACCATGTAGTCAGAAAGCA+TGG | + | chr8_4:52301945-52301964 | Msa1332310:CDS | 40.0% | |
| ! | GTCAGAAAGCATGGTCAAAA+TGG | + | chr8_4:52301954-52301973 | Msa1332310:CDS | 40.0% |
| !! | TGAACACCTCTGATTTTTGG+AGG | - | chr8_4:52301997-52302016 | None:intergenic | 40.0% |
| TAGTGCATTATTGCCCTGTT+TGG | + | chr8_4:52302052-52302071 | Msa1332310:intron | 40.0% | |
| TATTCTTGTGCGGGTATGAT+AGG | + | chr8_4:52302282-52302301 | Msa1332310:intron | 40.0% | |
| ATTCTTGTGCGGGTATGATA+GGG | + | chr8_4:52302283-52302302 | Msa1332310:intron | 40.0% | |
| ! | GGTCTTAATGTGATGGAACA+AGG | + | chr8_4:52302392-52302411 | Msa1332310:intron | 40.0% |
| TAGAACAGACTACTCTGATG+TGG | + | chr8_4:52302733-52302752 | Msa1332310:CDS | 40.0% | |
| TCTGTACTCACCCTATGTTT+GGG | + | chr8_4:52302978-52302997 | Msa1332310:CDS | 40.0% | |
| AGTGGAAAAAATGGGTGGAA+GGG | + | chr8_4:52303007-52303026 | Msa1332310:CDS | 40.0% | |
| TGTGATAAACTGTGATCCAG+CGG | - | chr8_4:52303170-52303189 | None:intergenic | 40.0% | |
| CAGTTTATCACACATACCAC+AGG | + | chr8_4:52303178-52303197 | Msa1332310:CDS | 40.0% | |
| GCAACACCAATAGACACAAA+GGG | + | chr8_4:52303229-52303248 | Msa1332310:CDS | 40.0% | |
| AAATCTTTGCAGTTGCTCCA+TGG | - | chr8_4:52303341-52303360 | None:intergenic | 40.0% | |
| GCAACTGCAAAGATTTGATC+TGG | + | chr8_4:52303345-52303364 | Msa1332310:CDS | 40.0% | |
| ! | CAGCTTTTTGACCGTTTACA+TGG | + | chr8_4:52303388-52303407 | Msa1332310:CDS | 40.0% |
| CTACTGTCTTCTGATTTCTC+AGG | - | chr8_4:52303481-52303500 | None:intergenic | 40.0% | |
| GAAATCAGAAGACAGTAGTG+TGG | + | chr8_4:52303483-52303502 | Msa1332310:CDS | 40.0% | |
| ! | ATCTTCTTTTTCCAATGCCG+TGG | + | chr8_4:52303507-52303526 | Msa1332310:CDS | 40.0% |
| CTAAGACAGTGTGACCTTGA+CGG | - | chr8_4:52301179-52301198 | None:intergenic | 45.0% | |
| GTGTTCTTCGCAGAGATCAT+CGG | - | chr8_4:52301265-52301284 | None:intergenic | 45.0% | |
| CTCCGTTTGAGTCGTTGAAA+TGG | - | chr8_4:52301348-52301367 | None:intergenic | 45.0% | |
| CGTTGACGTTCTTTCAGTCA+AGG | + | chr8_4:52301377-52301396 | Msa1332310:CDS | 45.0% | |
| ! | TGGAAGAGAAGGGTGTAGAA+TGG | + | chr8_4:52301584-52301603 | Msa1332310:CDS | 45.0% |
| ! | AAGAGAAGGGTGTAGAATGG+TGG | + | chr8_4:52301587-52301606 | Msa1332310:CDS | 45.0% |
| TTTGGAGATGTTGGAGAGGT+TGG | + | chr8_4:52301812-52301831 | Msa1332310:CDS | 45.0% | |
| GATGTTGGAGAGGTTGGATT+TGG | + | chr8_4:52301818-52301837 | Msa1332310:CDS | 45.0% | |
| !!! | GAGGTTGGATTTGGCTTTTG+AGG | + | chr8_4:52301827-52301846 | Msa1332310:CDS | 45.0% |
| TGTGAGGAAGCAGTTGTTTG+AGG | + | chr8_4:52301887-52301906 | Msa1332310:CDS | 45.0% | |
| GACCATGCTTTCTGACTACA+TGG | - | chr8_4:52301950-52301969 | None:intergenic | 45.0% | |
| TTCTTGTGCGGGTATGATAG+GGG | + | chr8_4:52302284-52302303 | Msa1332310:intron | 45.0% | |
| !! | ATCAAATGGTTCTGGCCAGT+CGG | + | chr8_4:52302607-52302626 | Msa1332310:CDS | 45.0% |
| CTCTGTACTCACCCTATGTT+TGG | + | chr8_4:52302977-52302996 | Msa1332310:CDS | 45.0% | |
| GGCCAGAGAGTGGAAAAAAT+GGG | + | chr8_4:52302999-52303018 | Msa1332310:CDS | 45.0% | |
| !!! | CACCCATTTTTTCCACTCTC+TGG | - | chr8_4:52303004-52303023 | None:intergenic | 45.0% |
| CAGAGAGTGGAAAAAATGGG+TGG | + | chr8_4:52303002-52303021 | Msa1332310:CDS | 45.0% | |
| GAGTGGAAAAAATGGGTGGA+AGG | + | chr8_4:52303006-52303025 | Msa1332310:CDS | 45.0% | |
| TGTCATGTGCCGAACATGAT+TGG | + | chr8_4:52303140-52303159 | Msa1332310:CDS | 45.0% | |
| GGCAACACCAATAGACACAA+AGG | + | chr8_4:52303228-52303247 | Msa1332310:CDS | 45.0% | |
| ! | AGTTTGGTGGAGAATACTGG+TGG | + | chr8_4:52303268-52303287 | Msa1332310:CDS | 45.0% |
| ! | GTTTGGTGGAGAATACTGGT+GGG | + | chr8_4:52303269-52303288 | Msa1332310:CDS | 45.0% |
| TTTGGTGGAGAATACTGGTG+GGG | + | chr8_4:52303270-52303289 | Msa1332310:CDS | 45.0% | |
| TCAGGCAACATAGATCTCTC+TGG | - | chr8_4:52303463-52303482 | None:intergenic | 45.0% | |
| TCATATAGCATCCACGGCAT+TGG | - | chr8_4:52303521-52303540 | None:intergenic | 45.0% | |
| TTTGAACGACGGTGAGTGGA+AGG | - | chr8_4:52300920-52300939 | None:intergenic | 50.0% | |
| AAATGTAGGGTTCAGGCGAG+TGG | - | chr8_4:52300962-52300981 | None:intergenic | 50.0% | |
| GGGGAAATGGAGATGGAGAA+TGG | - | chr8_4:52300985-52301004 | None:intergenic | 50.0% | |
| GAAAGAGGGGGAAATGGAGA+TGG | - | chr8_4:52300992-52301011 | None:intergenic | 50.0% | |
| ACGGTTGAAAGAGGGGGAAA+TGG | - | chr8_4:52300998-52301017 | None:intergenic | 50.0% | |
| TGGTGGAACGGTTGAAAGAG+GGG | - | chr8_4:52301005-52301024 | None:intergenic | 50.0% | |
| ! | GTGGTGGAACGGTTGAAAGA+GGG | - | chr8_4:52301006-52301025 | None:intergenic | 50.0% |
| !! | AATGGTGAGGGGTTTTGTGG+TGG | - | chr8_4:52301025-52301044 | None:intergenic | 50.0% |
| TCAATTGCGCGAATGGTGAG+GGG | - | chr8_4:52301036-52301055 | None:intergenic | 50.0% | |
| GTCAATTGCGCGAATGGTGA+GGG | - | chr8_4:52301037-52301056 | None:intergenic | 50.0% | |
| CCACTCTCAGGTCCAAACAT+AGG | - | chr8_4:52301465-52301484 | None:intergenic | 50.0% | |
| CCTATGTTTGGACCTGAGAG+TGG | + | chr8_4:52301462-52301481 | Msa1332310:CDS | 50.0% | |
| AGTGGAAGCAATGGCTGGAA+AGG | + | chr8_4:52301480-52301499 | Msa1332310:CDS | 50.0% | |
| TCTTGTGCGGGTATGATAGG+GGG | + | chr8_4:52302285-52302304 | Msa1332310:intron | 50.0% | |
| TCTGCTGATGCCAGACTACA+TGG | + | chr8_4:52302575-52302594 | Msa1332310:CDS | 50.0% | |
| CAGACTACTCTGATGTGGCT+CGG | + | chr8_4:52302738-52302757 | Msa1332310:CDS | 50.0% | |
| AGACTACTCTGATGTGGCTC+GGG | + | chr8_4:52302739-52302758 | Msa1332310:CDS | 50.0% | |
| ! | TCTGATGTGGCTCGGGAATT+GGG | + | chr8_4:52302746-52302765 | Msa1332310:CDS | 50.0% |
| CATTGCCTATGCAGAGGTTG+AGG | + | chr8_4:52302867-52302886 | Msa1332310:CDS | 50.0% | |
| CTTCTCCTCAACCTCTGCAT+AGG | - | chr8_4:52302875-52302894 | None:intergenic | 50.0% | |
| CACTCTCTGGCCCAAACATA+GGG | - | chr8_4:52302991-52303010 | None:intergenic | 50.0% | |
| GGGCCAGAGAGTGGAAAAAA+TGG | + | chr8_4:52302998-52303017 | Msa1332310:CDS | 50.0% | |
| !! | TTCCAAAGAAGGGTGCCGAA+TGG | + | chr8_4:52303111-52303130 | Msa1332310:CDS | 50.0% |
| AACCATTCGGCACCCTTCTT+TGG | - | chr8_4:52303116-52303135 | None:intergenic | 50.0% | |
| AGCGGCATGCCAATCATGTT+CGG | - | chr8_4:52303152-52303171 | None:intergenic | 50.0% | |
| !! | GCGTTTTGAACGACGGTGAG+TGG | - | chr8_4:52300924-52300943 | None:intergenic | 55.0% |
| !! | TGCGACGGCGTTTTGAACGA+CGG | - | chr8_4:52300931-52300950 | None:intergenic | 55.0% |
| CGAGTGGTGGTTGAATGCGA+CGG | - | chr8_4:52300946-52300965 | None:intergenic | 55.0% | |
| GGTGGAACGGTTGAAAGAGG+GGG | - | chr8_4:52301004-52301023 | None:intergenic | 55.0% | |
| !! | GGTGGTGGAACGGTTGAAAG+AGG | - | chr8_4:52301007-52301026 | None:intergenic | 55.0% |
| !!! | GGGGTTTTGTGGTGGTGGAA+CGG | - | chr8_4:52301017-52301036 | None:intergenic | 55.0% |
| ! | GCGAATGGTGAGGGGTTTTG+TGG | - | chr8_4:52301028-52301047 | None:intergenic | 55.0% |
| CGTCAATTGCGCGAATGGTG+AGG | - | chr8_4:52301038-52301057 | None:intergenic | 55.0% | |
| TGCTGCGTCAATTGCGCGAA+TGG | - | chr8_4:52301043-52301062 | None:intergenic | 55.0% | |
| ! | AGTGTGACCTTGACGGACGA+AGG | - | chr8_4:52301172-52301191 | None:intergenic | 55.0% |
| TTGAGCGACGGCGGAGTAAT+CGG | - | chr8_4:52301214-52301233 | None:intergenic | 55.0% | |
| TCCGCCGTCGCTCAAAACAT+CGG | + | chr8_4:52301219-52301238 | Msa1332310:CDS | 55.0% | |
| !! | GACGCCGATGTTTTGAGCGA+CGG | - | chr8_4:52301226-52301245 | None:intergenic | 55.0% |
| CGCAGAGATCATCGGCGTTA+GGG | - | chr8_4:52301257-52301276 | None:intergenic | 55.0% | |
| TCGCAGAGATCATCGGCGTT+AGG | - | chr8_4:52301258-52301277 | None:intergenic | 55.0% | |
| GGACCTGAGAGTGGAAGCAA+TGG | + | chr8_4:52301471-52301490 | Msa1332310:CDS | 55.0% | |
| CAGCCATTGCTTCCACTCTC+AGG | - | chr8_4:52301477-52301496 | None:intergenic | 55.0% | |
| CTGAGAGTGGAAGCAATGGC+TGG | + | chr8_4:52301475-52301494 | Msa1332310:CDS | 55.0% | |
| GCTTTGTGCTGTCATCCGAC+TGG | - | chr8_4:52302625-52302644 | None:intergenic | 55.0% | |
| ! | CTCTGATGTGGCTCGGGAAT+TGG | + | chr8_4:52302745-52302764 | Msa1332310:CDS | 55.0% |
| CCACTCTCTGGCCCAAACAT+AGG | - | chr8_4:52302992-52303011 | None:intergenic | 55.0% | |
| CCTATGTTTGGGCCAGAGAG+TGG | + | chr8_4:52302989-52303008 | Msa1332310:CDS | 55.0% | |
| GAACATGATTGGCATGCCGC+TGG | + | chr8_4:52303151-52303170 | Msa1332310:CDS | 55.0% | |
| TGTAGGGTTCAGGCGAGTGG+TGG | - | chr8_4:52300959-52300978 | None:intergenic | 60.0% | |
| !! | GGTGAGGGGTTTTGTGGTGG+TGG | - | chr8_4:52301022-52301041 | None:intergenic | 60.0% |
| GCTACCACCTTCGTCCGTCA+AGG | + | chr8_4:52301162-52301181 | Msa1332310:CDS | 60.0% | |
| ! | GTGACCTTGACGGACGAAGG+TGG | - | chr8_4:52301169-52301188 | None:intergenic | 60.0% |
| GACGGCGGAGTAATCGGAAC+GGG | - | chr8_4:52301208-52301227 | None:intergenic | 60.0% | |
| CGACGGCGGAGTAATCGGAA+CGG | - | chr8_4:52301209-52301228 | None:intergenic | 60.0% | |
| !! | GCCGATGTTTTGAGCGACGG+CGG | - | chr8_4:52301223-52301242 | None:intergenic | 60.0% |
| TGCGGGTATGATAGGGGGAG+TGG | + | chr8_4:52302290-52302309 | Msa1332310:intron | 60.0% | |
| ! | GACGGACGAAGGTGGTAGCG+AGG | - | chr8_4:52301161-52301180 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 52300901 | 52303720 | 52300901 | ID=Msa1332310;Name=Msa1332310 |
| chr8_4 | mRNA | 52300901 | 52303720 | 52300901 | ID=Msa1332310-mRNA-1;Parent=Msa1332310;Name=Msa1332310-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0.5|1|1|1|2|180|684 |
| chr8_4 | exon | 52300901 | 52301988 | 52300901 | ID=Msa1332310-mRNA-1:exon:15651;Parent=Msa1332310-mRNA-1 |
| chr8_4 | exon | 52302574 | 52303720 | 52302574 | ID=Msa1332310-mRNA-1:exon:15652;Parent=Msa1332310-mRNA-1 |
| chr8_4 | CDS | 52300901 | 52301988 | 52300901 | ID=Msa1332310-mRNA-1:cds;Parent=Msa1332310-mRNA-1 |
| chr8_4 | CDS | 52302574 | 52303540 | 52302574 | ID=Msa1332310-mRNA-1:cds;Parent=Msa1332310-mRNA-1 |
| chr8_4 | three_prime_UTR | 52303541 | 52303720 | 52303541 | ID=Msa1332310-mRNA-1:three_prime_utr;Parent=Msa1332310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
