Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215630 | XP_003609465.1 | 88.712 | 691 | 24 | 7 | 1 | 639 | 1 | 689 | 0.0 | 1229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215630 | sp|Q944B6|TYRA1_ARATH | 64.493 | 552 | 156 | 7 | 79 | 597 | 75 | 619 | 0.0 | 714 |
| Msa1215630 | sp|Q944B6|TYRA1_ARATH | 59.236 | 314 | 120 | 3 | 334 | 639 | 44 | 357 | 5.55e-123 | 381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1205160 | Msa1215630 | -0.813788 | 2.143614e-51 | -8.615850e-47 |
| Msa1215360 | Msa1215630 | 0.835400 | 1.715206e-56 | -8.615850e-47 |
| Msa1215630 | Msa1250210 | -0.817259 | 3.617982e-52 | -8.615850e-47 |
| Msa1215630 | Msa1332310 | 0.921356 | 3.975421e-88 | -8.615850e-47 |
| Msa1215630 | Msa1447180 | 0.800196 | 1.614345e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215630 | MtrunA17_Chr4g0064761 | 88.158 | 684 | 30 | 7 | 1 | 639 | 1 | 678 | 0.0 | 1206 |
| Msa1215630 | MtrunA17_Chr3g0114251 | 53.846 | 260 | 116 | 2 | 337 | 596 | 2 | 257 | 9.39e-93 | 287 |
| Msa1215630 | MtrunA17_Chr3g0114251 | 44.783 | 230 | 103 | 4 | 79 | 284 | 30 | 259 | 2.99e-59 | 199 |
| Msa1215630 | MtrunA17_Chr5g0437781 | 54.440 | 259 | 113 | 3 | 339 | 596 | 3 | 257 | 2.38e-92 | 286 |
| Msa1215630 | MtrunA17_Chr5g0437781 | 40.856 | 257 | 111 | 4 | 69 | 284 | 3 | 259 | 1.91e-57 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1215630 | AT5G34930.3 | 64.493 | 552 | 156 | 7 | 79 | 597 | 55 | 599 | 0.0 | 715 |
| Msa1215630 | AT5G34930.3 | 59.236 | 314 | 120 | 3 | 334 | 639 | 24 | 337 | 2.23e-124 | 382 |
| Msa1215630 | AT5G34930.3 | 52.313 | 281 | 88 | 5 | 48 | 283 | 320 | 599 | 6.82e-89 | 289 |
| Msa1215630 | AT5G34930.2 | 64.493 | 552 | 156 | 7 | 79 | 597 | 97 | 641 | 0.0 | 714 |
| Msa1215630 | AT5G34930.2 | 59.236 | 314 | 120 | 3 | 334 | 639 | 66 | 379 | 8.67e-124 | 381 |
| Msa1215630 | AT5G34930.1 | 64.493 | 552 | 156 | 7 | 79 | 597 | 75 | 619 | 0.0 | 714 |
| Msa1215630 | AT5G34930.1 | 59.236 | 314 | 120 | 3 | 334 | 639 | 44 | 357 | 5.64e-124 | 381 |
| Msa1215630 | AT1G15710.1 | 62.126 | 301 | 106 | 1 | 308 | 608 | 32 | 324 | 1.01e-137 | 407 |
| Msa1215630 | AT1G15710.1 | 50.000 | 312 | 106 | 5 | 35 | 296 | 15 | 326 | 4.62e-99 | 307 |
Find 132 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTCAATCAAGAACTTT+TGG | 0.201746 | 8_1:-76965252 | None:intergenic |
| TCATATCCCTTTGTGTCTAT+TGG | 0.228324 | 8_1:-76964836 | None:intergenic |
| CCAAAAGTTCTTGATTGAAA+TGG | 0.231597 | 8_1:+76965252 | Msa1215630:three_prime_UTR |
| CTCTGATGTGGCTCGGGAAT+TGG | 0.233298 | 8_1:+76964346 | Msa1215630:CDS |
| AACCATTCGGCACCCTTCTT+TGG | 0.240904 | 8_1:-76964714 | None:intergenic |
| CTCTGTACTCACCCTATGTT+TGG | 0.243282 | 8_1:+76964578 | Msa1215630:CDS |
| GTGGAATTGAAGTGCGATTT+TGG | 0.268541 | 8_1:-76962684 | None:intergenic |
| ACATACTGTTGGTAGGGTTT+TGG | 0.269241 | 8_1:+76963263 | Msa1215630:CDS |
| TGTTGAAGAAACAAGTTTCT+AGG | 0.270162 | 8_1:-76964533 | None:intergenic |
| TGCTGTAAAGGTCCAATCTT+TGG | 0.274778 | 8_1:+76963512 | Msa1215630:CDS |
| TATGTTTAATAAGAATTCTT+TGG | 0.276415 | 8_1:+76963395 | Msa1215630:CDS |
| ATTGAAATGGGAAAACAAAA+AGG | 0.277994 | 8_1:+76965265 | Msa1215630:three_prime_UTR |
| ATATGAAACTTTATTAAGTT+TGG | 0.287803 | 8_1:+76964853 | Msa1215630:CDS |
| AAAATTGCAATCATTGGTTT+TGG | 0.292029 | 8_1:+76964248 | Msa1215630:CDS |
| TCATACCCTTTAGTATTAAT+AGG | 0.314028 | 8_1:-76963309 | None:intergenic |
| AAACTCAAAATCGCTATTAT+CGG | 0.315533 | 8_1:+76962716 | Msa1215630:CDS |
| GTGCAAAGTAAAATCACTTC+TGG | 0.317402 | 8_1:-76964413 | None:intergenic |
| GATAGCTTTGATCTGTACTA+TGG | 0.319128 | 8_1:+76964893 | Msa1215630:CDS |
| AAGCTCAAAATTGCAATCAT+TGG | 0.331375 | 8_1:+76964242 | Msa1215630:CDS |
| CAAAAGTTCTTGATTGAAAT+GGG | 0.335205 | 8_1:+76965253 | Msa1215630:three_prime_UTR |
| ATTTGTTCGCATCCTATGTT+TGG | 0.336142 | 8_1:+76963051 | Msa1215630:CDS |
| GTCAGAAAGCATGGTCAAAA+TGG | 0.341124 | 8_1:+76963555 | Msa1215630:CDS |
| TCTGATGTGGCTCGGGAATT+GGG | 0.343949 | 8_1:+76964347 | Msa1215630:CDS |
| TAAGAATTCTTTGGAGATGT+TGG | 0.349313 | 8_1:+76963404 | Msa1215630:CDS |
| TATTACAGATCAAATGGTTC+TGG | 0.351997 | 8_1:+76964200 | Msa1215630:CDS |
| TTTGGAGATGTTGGAGAGGT+TGG | 0.355291 | 8_1:+76963413 | Msa1215630:CDS |
| CAGCCATTGCTTCCACTCTC+AGG | 0.359401 | 8_1:-76963075 | None:intergenic |
| TTAAGTTTGGTGGAGAATAC+TGG | 0.361358 | 8_1:+76964866 | Msa1215630:CDS |
| GATGTTGGAGAGGTTGGATT+TGG | 0.372198 | 8_1:+76963419 | Msa1215630:CDS |
| TTGTAATTTGTAATTGTAGT+AGG | 0.372848 | 8_1:+76965162 | Msa1215630:three_prime_UTR |
| TCGCAGAGATCATCGGCGTT+AGG | 0.389198 | 8_1:-76962856 | None:intergenic |
| TGTTATCAGCACCCAAAGAT+TGG | 0.393776 | 8_1:-76963524 | None:intergenic |
| CGCAGAGATCATCGGCGTTA+GGG | 0.394910 | 8_1:-76962855 | None:intergenic |
| CTCCGTTTGAGTCGTTGAAA+TGG | 0.411619 | 8_1:-76962946 | None:intergenic |
| TTGAGCGACGGCGGAGTAAT+CGG | 0.417633 | 8_1:-76962812 | None:intergenic |
| CATGGTTATTACAGATCAAA+TGG | 0.428810 | 8_1:+76964194 | Msa1215630:CDS |
| TCTGTACTCACCCTATGTTT+GGG | 0.429958 | 8_1:+76964579 | Msa1215630:CDS |
| CTTGATGTGTTTGGAAGAGA+AGG | 0.431338 | 8_1:+76963174 | Msa1215630:CDS |
| GTGCATAGAAGAATAACTTC+AGG | 0.433085 | 8_1:-76962886 | None:intergenic |
| CCACTCTCTGGCCCAAACAT+AGG | 0.433260 | 8_1:-76964590 | None:intergenic |
| TTCGATAGATACCATGTAAA+CGG | 0.435811 | 8_1:-76965000 | None:intergenic |
| CAAATTATATCGAAATAATT+CGG | 0.437847 | 8_1:-76963033 | None:intergenic |
| GTACAGAGAACATCAAAATA+AGG | 0.438400 | 8_1:-76964563 | None:intergenic |
| GAGAAGTTTCTTGATGTGTT+TGG | 0.438958 | 8_1:+76963165 | Msa1215630:CDS |
| GCAACTGCAAAGATTTGATC+TGG | 0.440411 | 8_1:+76964946 | Msa1215630:CDS |
| TGAAACTTTATTAAGTTTGG+TGG | 0.443320 | 8_1:+76964856 | Msa1215630:CDS |
| GGGGAAATGGAGATGGAGAA+TGG | 0.450126 | 8_1:-76962584 | None:intergenic |
| CACATGACATTTCAACCATT+CGG | 0.455410 | 8_1:-76964727 | None:intergenic |
| TCATTACACATACTGTTGGT+AGG | 0.455467 | 8_1:+76963256 | Msa1215630:CDS |
| AGAATGGAAATGTAGGGTTC+AGG | 0.458510 | 8_1:-76962568 | None:intergenic |
| GTCAATTGCGCGAATGGTGA+GGG | 0.458607 | 8_1:-76962636 | None:intergenic |
| CTACACCTATTAATACTAAA+GGG | 0.461298 | 8_1:+76963304 | Msa1215630:CDS |
| AGCGGCATGCCAATCATGTT+CGG | 0.467134 | 8_1:-76964750 | None:intergenic |
| GACCATGCTTTCTGACTACA+TGG | 0.468910 | 8_1:-76963548 | None:intergenic |
| GAATTGGGAACGATGAAACT+AGG | 0.469059 | 8_1:+76963130 | Msa1215630:CDS |
| GTGGTGGAACGGTTGAAAGA+GGG | 0.473021 | 8_1:-76962605 | None:intergenic |
| TCATATAGCATCCACGGCAT+TGG | 0.473233 | 8_1:-76965119 | None:intergenic |
| GCTGTAAAGGTCCAATCTTT+GGG | 0.475005 | 8_1:+76963513 | Msa1215630:CDS |
| ACATGGTATCTATCGAAAAC+AGG | 0.478214 | 8_1:+76965006 | Msa1215630:CDS |
| GAGATGGAGAATGGAAATGT+AGG | 0.479315 | 8_1:-76962575 | None:intergenic |
| TTCCATTTCAACGACTCAAA+CGG | 0.483623 | 8_1:+76962944 | Msa1215630:CDS |
| TCTACACCTATTAATACTAA+AGG | 0.484629 | 8_1:+76963303 | Msa1215630:CDS |
| CTGAGAGTGGAAGCAATGGC+TGG | 0.485617 | 8_1:+76963076 | Msa1215630:CDS |
| GTTGTTTGAGGATGCTGTAA+AGG | 0.489972 | 8_1:+76963500 | Msa1215630:CDS |
| TGTGAGGAAGCAGTTGTTTG+AGG | 0.491108 | 8_1:+76963488 | Msa1215630:CDS |
| CTACTGTCTTCTGATTTCTC+AGG | 0.493221 | 8_1:-76965079 | None:intergenic |
| CACTCTCTGGCCCAAACATA+GGG | 0.495304 | 8_1:-76964589 | None:intergenic |
| TACAAATTACAAGTAAATCA+TGG | 0.495586 | 8_1:-76965151 | None:intergenic |
| TCAGGCAACATAGATCTCTC+TGG | 0.497335 | 8_1:-76965061 | None:intergenic |
| CATTGCCTATGCAGAGGTTG+AGG | 0.497467 | 8_1:+76964468 | Msa1215630:CDS |
| CATTACACATACTGTTGGTA+GGG | 0.500312 | 8_1:+76963257 | Msa1215630:CDS |
| CGTCAATTGCGCGAATGGTG+AGG | 0.500696 | 8_1:-76962637 | None:intergenic |
| TAGATCTCTCTGGAAAATCA+TGG | 0.506679 | 8_1:-76965051 | None:intergenic |
| TCTGTAATAACCATGTAGTC+TGG | 0.508555 | 8_1:-76964186 | None:intergenic |
| GACGGCGGAGTAATCGGAAC+GGG | 0.514757 | 8_1:-76962806 | None:intergenic |
| TCTGCTGATGCCAGACTACA+TGG | 0.514877 | 8_1:+76964176 | Msa1215630:CDS |
| AGACTACTCTGATGTGGCTC+GGG | 0.516024 | 8_1:+76964340 | Msa1215630:CDS |
| TTTGAACGACGGTGAGTGGA+AGG | 0.519334 | 8_1:-76962519 | None:intergenic |
| GAACATGATTGGCATGCCGC+TGG | 0.521901 | 8_1:+76964752 | Msa1215630:CDS |
| AGTGGAAGCAATGGCTGGAA+AGG | 0.522855 | 8_1:+76963081 | Msa1215630:CDS |
| AACATACAAACAGAAATAGC+AGG | 0.524133 | 8_1:-76965186 | None:intergenic |
| TGTCATGTGCCGAACATGAT+TGG | 0.533227 | 8_1:+76964741 | Msa1215630:CDS |
| GGTGGTGGAACGGTTGAAAG+AGG | 0.534027 | 8_1:-76962606 | None:intergenic |
| TGCTGCGTCAATTGCGCGAA+TGG | 0.534393 | 8_1:-76962642 | None:intergenic |
| TGCATAGAAGAATAACTTCA+GGG | 0.543778 | 8_1:-76962885 | None:intergenic |
| AGATGGAGAATGGAAATGTA+GGG | 0.544501 | 8_1:-76962574 | None:intergenic |
| TGGTGGAACGGTTGAAAGAG+GGG | 0.545036 | 8_1:-76962604 | None:intergenic |
| TTATTTGATAAAGTCAGAGT+AGG | 0.545161 | 8_1:+76964641 | Msa1215630:CDS |
| CCTATGTTTGGGCCAGAGAG+TGG | 0.548339 | 8_1:+76964590 | Msa1215630:CDS |
| CTTGTATAATATAAATGCCA+TGG | 0.549937 | 8_1:+76964922 | Msa1215630:CDS |
| AATTGGGAACGATGAAACTA+GGG | 0.555673 | 8_1:+76963131 | Msa1215630:CDS |
| CCACTCTCAGGTCCAAACAT+AGG | 0.557184 | 8_1:-76963063 | None:intergenic |
| AAATCTTTGCAGTTGCTCCA+TGG | 0.565501 | 8_1:-76964939 | None:intergenic |
| CAGACTACTCTGATGTGGCT+CGG | 0.566298 | 8_1:+76964339 | Msa1215630:CDS |
| AACCATGTAGTCAGAAAGCA+TGG | 0.573697 | 8_1:+76963546 | Msa1215630:CDS |
| TCAATTTCATATAGCATCCA+CGG | 0.574274 | 8_1:-76965125 | None:intergenic |
| GATCATGATAGATATGCAGC+TGG | 0.574527 | 8_1:+76963225 | Msa1215630:CDS |
| AAGAGAAGGGTGTAGAATGG+TGG | 0.576047 | 8_1:+76963188 | Msa1215630:CDS |
| CAATTCATTACACATACTGT+TGG | 0.577842 | 8_1:+76963252 | Msa1215630:CDS |
| GTGTTCTTCGCAGAGATCAT+CGG | 0.583978 | 8_1:-76962863 | None:intergenic |
| GCTTTGTGCTGTCATCCGAC+TGG | 0.586815 | 8_1:-76964223 | None:intergenic |
| ATCAAATGGTTCTGGCCAGT+CGG | 0.589790 | 8_1:+76964208 | Msa1215630:CDS |
| CCTATGTTTGGACCTGAGAG+TGG | 0.590378 | 8_1:+76963063 | Msa1215630:CDS |
| GGTGGAACGGTTGAAAGAGG+GGG | 0.590460 | 8_1:-76962603 | None:intergenic |
| TGGAAGAGAAGGGTGTAGAA+TGG | 0.591930 | 8_1:+76963185 | Msa1215630:CDS |
| TTAAATCATTGCCTATGCAG+AGG | 0.592977 | 8_1:+76964462 | Msa1215630:CDS |
| CTTCTCCTCAACCTCTGCAT+AGG | 0.596192 | 8_1:-76964473 | None:intergenic |
| GTTTGGTGGAGAATACTGGT+GGG | 0.596701 | 8_1:+76964870 | Msa1215630:CDS |
| TCACCAACCGTCAAAATGCT+CGG | 0.598728 | 8_1:+76962488 | None:intergenic |
| GCAACACCAATAGACACAAA+GGG | 0.602309 | 8_1:+76964830 | Msa1215630:CDS |
| AGTTTGGTGGAGAATACTGG+TGG | 0.605516 | 8_1:+76964869 | Msa1215630:CDS |
| TTCCAAAGAAGGGTGCCGAA+TGG | 0.611629 | 8_1:+76964712 | Msa1215630:CDS |
| GGCAACACCAATAGACACAA+AGG | 0.612817 | 8_1:+76964829 | Msa1215630:CDS |
| TGTAGGGTTCAGGCGAGTGG+TGG | 0.616210 | 8_1:-76962558 | None:intergenic |
| CAGTTTATCACACATACCAC+AGG | 0.621402 | 8_1:+76964779 | Msa1215630:CDS |
| CTCATTTGCATGATGTTGTG+AGG | 0.622338 | 8_1:+76963472 | Msa1215630:CDS |
| ATTCTTTGGAGATGTTGGAG+AGG | 0.622927 | 8_1:+76963409 | Msa1215630:CDS |
| TCCGCCGTCGCTCAAAACAT+CGG | 0.622986 | 8_1:+76962820 | Msa1215630:CDS |
| TCAATTGCGCGAATGGTGAG+GGG | 0.623028 | 8_1:-76962635 | None:intergenic |
| TTGATGTGTTTGGAAGAGAA+GGG | 0.623550 | 8_1:+76963175 | Msa1215630:CDS |
| AAATGTAGGGTTCAGGCGAG+TGG | 0.630231 | 8_1:-76962561 | None:intergenic |
| CAGAGAACATCAAAATAAGG+TGG | 0.631350 | 8_1:-76964560 | None:intergenic |
| CGAGTGGTGGTTGAATGCGA+CGG | 0.646540 | 8_1:-76962545 | None:intergenic |
| TAGAACAGACTACTCTGATG+TGG | 0.648768 | 8_1:+76964334 | Msa1215630:CDS |
| ATCATGATAGATATGCAGCT+GGG | 0.652229 | 8_1:+76963226 | Msa1215630:CDS |
| ACATACAAACAGAAATAGCA+GGG | 0.653757 | 8_1:-76965185 | None:intergenic |
| TTTGGTGGAGAATACTGGTG+GGG | 0.654521 | 8_1:+76964871 | Msa1215630:CDS |
| GGACCTGAGAGTGGAAGCAA+TGG | 0.666958 | 8_1:+76963072 | Msa1215630:CDS |
| CGACGGCGGAGTAATCGGAA+CGG | 0.668802 | 8_1:-76962807 | None:intergenic |
| GAGATGAATCAAGAATATTG+CGG | 0.703500 | 8_1:+76964666 | Msa1215630:CDS |
| GAAATCAGAAGACAGTAGTG+TGG | 0.713102 | 8_1:+76965084 | Msa1215630:CDS |
| TGTGATAAACTGTGATCCAG+CGG | 0.727709 | 8_1:-76964768 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTATATCGAAATAATT+CGG | - | chr8_1:76963036-76963055 | None:intergenic | 15.0% |
| !! | TATGTTTAATAAGAATTCTT+TGG | + | chr8_1:76963395-76963414 | Msa1215630:CDS | 15.0% |
| !! | ATATGAAACTTTATTAAGTT+TGG | + | chr8_1:76964853-76964872 | Msa1215630:CDS | 15.0% |
| !!! | ATTTCGAGAAAAAAGTTTTT+GGG | - | chr8_1:76963009-76963028 | None:intergenic | 20.0% |
| !!! | AATTTCGAGAAAAAAGTTTT+TGG | - | chr8_1:76963010-76963029 | None:intergenic | 20.0% |
| !!! | GATAGTTTTGATCTTTATTA+TGG | + | chr8_1:76963366-76963385 | Msa1215630:CDS | 20.0% |
| !! | CTGACTTTATCAAATAAAAA+AGG | - | chr8_1:76964638-76964657 | None:intergenic | 20.0% |
| !!! | ATTTTTAGAAAAACTGAAGT+TGG | + | chr8_1:76964805-76964824 | Msa1215630:CDS | 20.0% |
| !! | TACAAATTACAAGTAAATCA+TGG | - | chr8_1:76965154-76965173 | None:intergenic | 20.0% |
| !!! | TTGTAATTTGTAATTGTAGT+AGG | + | chr8_1:76965162-76965181 | Msa1215630:three_prime_UTR | 20.0% |
| ! | AAACTCAAAATCGCTATTAT+CGG | + | chr8_1:76962716-76962735 | Msa1215630:CDS | 25.0% |
| ! | TTTACGAAAAAGTTCGAATT+GGG | + | chr8_1:76963115-76963134 | Msa1215630:intron | 25.0% |
| ! | TCTACACCTATTAATACTAA+AGG | + | chr8_1:76963303-76963322 | Msa1215630:CDS | 25.0% |
| ! | CTACACCTATTAATACTAAA+GGG | + | chr8_1:76963304-76963323 | Msa1215630:CDS | 25.0% |
| ! | TCATACCCTTTAGTATTAAT+AGG | - | chr8_1:76963312-76963331 | None:intergenic | 25.0% |
| ! | GTATGAATCTTTGTTGAATT+TGG | + | chr8_1:76963326-76963345 | Msa1215630:intron | 25.0% |
| ! | AGCTTATTTCATAAATGTCA+GGG | - | chr8_1:76963784-76963803 | None:intergenic | 25.0% |
| ! | TGTTGTTCTTTCATATGAAT+TGG | + | chr8_1:76963962-76963981 | Msa1215630:intron | 25.0% |
| ! | ATTCAAAATGAGTAACAAGT+AGG | + | chr8_1:76964034-76964053 | Msa1215630:intron | 25.0% |
| ! | TAGGTAATAATGACCATTTA+TGG | + | chr8_1:76964053-76964072 | Msa1215630:intron | 25.0% |
| !!! | AAAATTGCAATCATTGGTTT+TGG | + | chr8_1:76964248-76964267 | Msa1215630:CDS | 25.0% |
| ! | TTATTTGATAAAGTCAGAGT+AGG | + | chr8_1:76964641-76964660 | Msa1215630:CDS | 25.0% |
| !!! | TTGACATTTTTTCCAAAGAA+GGG | + | chr8_1:76964702-76964721 | Msa1215630:CDS | 25.0% |
| !!! | TTTTTCTAAAAATCTTCCTG+TGG | - | chr8_1:76964798-76964817 | None:intergenic | 25.0% |
| ! | TGAAACTTTATTAAGTTTGG+TGG | + | chr8_1:76964856-76964875 | Msa1215630:CDS | 25.0% |
| ! | CTTGTATAATATAAATGCCA+TGG | + | chr8_1:76964922-76964941 | Msa1215630:CDS | 25.0% |
| ! | CAAAAGTTCTTGATTGAAAT+GGG | + | chr8_1:76965253-76965272 | Msa1215630:three_prime_UTR | 25.0% |
| ! | ATTGAAATGGGAAAACAAAA+AGG | + | chr8_1:76965265-76965284 | Msa1215630:three_prime_UTR | 25.0% |
| !!! | TTTTGAGTTTTTGAGAGTTG+TGG | - | chr8_1:76962706-76962725 | None:intergenic | 30.0% |
| !! | TATTATCGGTTTGGTAACTT+CGG | + | chr8_1:76962730-76962749 | Msa1215630:intron | 30.0% |
| TGCATAGAAGAATAACTTCA+GGG | - | chr8_1:76962888-76962907 | None:intergenic | 30.0% | |
| !!! | CGAACTTTTTCGTAAACAAA+AGG | - | chr8_1:76963111-76963130 | None:intergenic | 30.0% |
| GTTTACGAAAAAGTTCGAAT+TGG | + | chr8_1:76963114-76963133 | Msa1215630:intron | 30.0% | |
| CAATTCATTACACATACTGT+TGG | + | chr8_1:76963252-76963271 | Msa1215630:CDS | 30.0% | |
| AATTTGGTTGAGAATACTAG+TGG | + | chr8_1:76963342-76963361 | Msa1215630:intron | 30.0% | |
| ATTTGGTTGAGAATACTAGT+GGG | + | chr8_1:76963343-76963362 | Msa1215630:intron | 30.0% | |
| ! | TAAGAATTCTTTGGAGATGT+TGG | + | chr8_1:76963404-76963423 | Msa1215630:CDS | 30.0% |
| ! | AAATGAACACCTCTGATTTT+TGG | - | chr8_1:76963601-76963620 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTCATCCAAACA+GGG | - | chr8_1:76963669-76963688 | None:intergenic | 30.0% |
| ! | ATTAAGTTGTTCATCCAAAC+AGG | - | chr8_1:76963670-76963689 | None:intergenic | 30.0% |
| CAGCTTATTTCATAAATGTC+AGG | - | chr8_1:76963785-76963804 | None:intergenic | 30.0% | |
| !!! | TCTGTTTTGTTATTCTTGTG+CGG | + | chr8_1:76963873-76963892 | Msa1215630:intron | 30.0% |
| TCATATGAATTGGATATGCT+TGG | + | chr8_1:76963972-76963991 | Msa1215630:intron | 30.0% | |
| TCTTAAATGCTCTCCATAAA+TGG | - | chr8_1:76964069-76964088 | None:intergenic | 30.0% | |
| !!! | TTTTGTTTTTGTTACTTGCG+AGG | + | chr8_1:76964099-76964118 | Msa1215630:intron | 30.0% |
| CATGGTTATTACAGATCAAA+TGG | + | chr8_1:76964194-76964213 | Msa1215630:CDS | 30.0% | |
| TATTACAGATCAAATGGTTC+TGG | + | chr8_1:76964200-76964219 | Msa1215630:CDS | 30.0% | |
| AAGCTCAAAATTGCAATCAT+TGG | + | chr8_1:76964242-76964261 | Msa1215630:CDS | 30.0% | |
| CAAAAACTATTGTACGTCAT+GGG | + | chr8_1:76964291-76964310 | Msa1215630:CDS | 30.0% | |
| TGTTGAAGAAACAAGTTTCT+AGG | - | chr8_1:76964536-76964555 | None:intergenic | 30.0% | |
| GTACAGAGAACATCAAAATA+AGG | - | chr8_1:76964566-76964585 | None:intergenic | 30.0% | |
| GAGATGAATCAAGAATATTG+CGG | + | chr8_1:76964666-76964685 | Msa1215630:CDS | 30.0% | |
| !!! | CTTGACATTTTTTCCAAAGA+AGG | + | chr8_1:76964701-76964720 | Msa1215630:CDS | 30.0% |
| TTTAGAAAAACTGAAGTTGG+AGG | + | chr8_1:76964808-76964827 | Msa1215630:CDS | 30.0% | |
| TTCGATAGATACCATGTAAA+CGG | - | chr8_1:76965003-76965022 | None:intergenic | 30.0% | |
| TCAATTTCATATAGCATCCA+CGG | - | chr8_1:76965128-76965147 | None:intergenic | 30.0% | |
| ACATACAAACAGAAATAGCA+GGG | - | chr8_1:76965188-76965207 | None:intergenic | 30.0% | |
| AACATACAAACAGAAATAGC+AGG | - | chr8_1:76965189-76965208 | None:intergenic | 30.0% | |
| !! | TCAAGAACTTTTGGAAAGAT+TGG | - | chr8_1:76965246-76965265 | None:intergenic | 30.0% |
| ! | CCATTTCAATCAAGAACTTT+TGG | - | chr8_1:76965255-76965274 | None:intergenic | 30.0% |
| CCAAAAGTTCTTGATTGAAA+TGG | + | chr8_1:76965252-76965271 | Msa1215630:three_prime_UTR | 30.0% | |
| AGATGGAGAATGGAAATGTA+GGG | - | chr8_1:76962577-76962596 | None:intergenic | 35.0% | |
| ! | CAAAATCGCTATTATCGGTT+TGG | + | chr8_1:76962721-76962740 | Msa1215630:intron | 35.0% |
| GTGCATAGAAGAATAACTTC+AGG | - | chr8_1:76962889-76962908 | None:intergenic | 35.0% | |
| TTCCATTTCAACGACTCAAA+CGG | + | chr8_1:76962944-76962963 | Msa1215630:CDS | 35.0% | |
| ATTTGTTCGCATCCTATGTT+TGG | + | chr8_1:76963051-76963070 | Msa1215630:CDS | 35.0% | |
| AATTGGGAACGATGAAACTA+GGG | + | chr8_1:76963131-76963150 | Msa1215630:CDS | 35.0% | |
| GAGAAGTTTCTTGATGTGTT+TGG | + | chr8_1:76963165-76963184 | Msa1215630:CDS | 35.0% | |
| TTGATGTGTTTGGAAGAGAA+GGG | + | chr8_1:76963175-76963194 | Msa1215630:CDS | 35.0% | |
| ATCATGATAGATATGCAGCT+GGG | + | chr8_1:76963226-76963245 | Msa1215630:CDS | 35.0% | |
| TCATTACACATACTGTTGGT+AGG | + | chr8_1:76963256-76963275 | Msa1215630:CDS | 35.0% | |
| CATTACACATACTGTTGGTA+GGG | + | chr8_1:76963257-76963276 | Msa1215630:CDS | 35.0% | |
| TTTGGTTGAGAATACTAGTG+GGG | + | chr8_1:76963344-76963363 | Msa1215630:intron | 35.0% | |
| !!! | ATTTGGCTTTTGAGGATTTG+AGG | + | chr8_1:76963436-76963455 | Msa1215630:CDS | 35.0% |
| TGTTATCCTCCAAAAATCAG+AGG | + | chr8_1:76963589-76963608 | Msa1215630:intron | 35.0% | |
| !!! | CTGTTTTGTTATTCTTGTGC+GGG | + | chr8_1:76963874-76963893 | Msa1215630:intron | 35.0% |
| !! | TATGCTTGGTCTTAATGTGA+TGG | + | chr8_1:76963986-76964005 | Msa1215630:intron | 35.0% |
| !!! | CGAGGTTGTTGTTTTAAATC+TGG | + | chr8_1:76964117-76964136 | Msa1215630:intron | 35.0% |
| TCTGTAATAACCATGTAGTC+TGG | - | chr8_1:76964189-76964208 | None:intergenic | 35.0% | |
| !!! | ATCATTGGTTTTGGCAACTT+TGG | + | chr8_1:76964257-76964276 | Msa1215630:CDS | 35.0% |
| ! | GACGTACAATAGTTTTTGCA+AGG | - | chr8_1:76964289-76964308 | None:intergenic | 35.0% |
| GCAAAAACTATTGTACGTCA+TGG | + | chr8_1:76964290-76964309 | Msa1215630:CDS | 35.0% | |
| GTGCAAAGTAAAATCACTTC+TGG | - | chr8_1:76964416-76964435 | None:intergenic | 35.0% | |
| TTAAATCATTGCCTATGCAG+AGG | + | chr8_1:76964462-76964481 | Msa1215630:CDS | 35.0% | |
| CAGAGAACATCAAAATAAGG+TGG | - | chr8_1:76964563-76964582 | None:intergenic | 35.0% | |
| CACATGACATTTCAACCATT+CGG | - | chr8_1:76964730-76964749 | None:intergenic | 35.0% | |
| TCATATCCCTTTGTGTCTAT+TGG | - | chr8_1:76964839-76964858 | None:intergenic | 35.0% | |
| ! | TTAAGTTTGGTGGAGAATAC+TGG | + | chr8_1:76964866-76964885 | Msa1215630:CDS | 35.0% |
| !! | GATAGCTTTGATCTGTACTA+TGG | + | chr8_1:76964893-76964912 | Msa1215630:CDS | 35.0% |
| ACATGGTATCTATCGAAAAC+AGG | + | chr8_1:76965006-76965025 | Msa1215630:CDS | 35.0% | |
| ! | TAGATCTCTCTGGAAAATCA+TGG | - | chr8_1:76965054-76965073 | None:intergenic | 35.0% |
| AGAATGGAAATGTAGGGTTC+AGG | - | chr8_1:76962571-76962590 | None:intergenic | 40.0% | |
| GAGATGGAGAATGGAAATGT+AGG | - | chr8_1:76962578-76962597 | None:intergenic | 40.0% | |
| ! | GTGGAATTGAAGTGCGATTT+TGG | - | chr8_1:76962687-76962706 | None:intergenic | 40.0% |
| GAATTGGGAACGATGAAACT+AGG | + | chr8_1:76963130-76963149 | Msa1215630:CDS | 40.0% | |
| ACGATGAAACTAGGGTTTCA+AGG | + | chr8_1:76963139-76963158 | Msa1215630:intron | 40.0% | |
| CTTGATGTGTTTGGAAGAGA+AGG | + | chr8_1:76963174-76963193 | Msa1215630:CDS | 40.0% | |
| GATCATGATAGATATGCAGC+TGG | + | chr8_1:76963225-76963244 | Msa1215630:CDS | 40.0% | |
| !! | ACATACTGTTGGTAGGGTTT+TGG | + | chr8_1:76963263-76963282 | Msa1215630:CDS | 40.0% |
| !! | CATACTGTTGGTAGGGTTTT+GGG | + | chr8_1:76963264-76963283 | Msa1215630:CDS | 40.0% |
| !!! | GGTTTTGGGTATGTTGATGT+TGG | + | chr8_1:76963278-76963297 | Msa1215630:CDS | 40.0% |
| ! | ATTCTTTGGAGATGTTGGAG+AGG | + | chr8_1:76963409-76963428 | Msa1215630:CDS | 40.0% |
| CTCATTTGCATGATGTTGTG+AGG | + | chr8_1:76963472-76963491 | Msa1215630:CDS | 40.0% | |
| GTTGTTTGAGGATGCTGTAA+AGG | + | chr8_1:76963500-76963519 | Msa1215630:CDS | 40.0% | |
| TGCTGTAAAGGTCCAATCTT+TGG | + | chr8_1:76963512-76963531 | Msa1215630:CDS | 40.0% | |
| GCTGTAAAGGTCCAATCTTT+GGG | + | chr8_1:76963513-76963532 | Msa1215630:CDS | 40.0% | |
| TGTTATCAGCACCCAAAGAT+TGG | - | chr8_1:76963527-76963546 | None:intergenic | 40.0% | |
| AACCATGTAGTCAGAAAGCA+TGG | + | chr8_1:76963546-76963565 | Msa1215630:CDS | 40.0% | |
| ! | GTCAGAAAGCATGGTCAAAA+TGG | + | chr8_1:76963555-76963574 | Msa1215630:CDS | 40.0% |
| !! | TGAACACCTCTGATTTTTGG+AGG | - | chr8_1:76963598-76963617 | None:intergenic | 40.0% |
| TAGTGCATTATTGCCCTGTT+TGG | + | chr8_1:76963653-76963672 | Msa1215630:intron | 40.0% | |
| TATTCTTGTGCGGGTATGAT+AGG | + | chr8_1:76963883-76963902 | Msa1215630:intron | 40.0% | |
| ATTCTTGTGCGGGTATGATA+GGG | + | chr8_1:76963884-76963903 | Msa1215630:intron | 40.0% | |
| ! | GGTCTTAATGTGATGGAACA+AGG | + | chr8_1:76963993-76964012 | Msa1215630:intron | 40.0% |
| TAGAACAGACTACTCTGATG+TGG | + | chr8_1:76964334-76964353 | Msa1215630:CDS | 40.0% | |
| TCTGTACTCACCCTATGTTT+GGG | + | chr8_1:76964579-76964598 | Msa1215630:CDS | 40.0% | |
| AGTGGAAAAAATGGGTGGAA+GGG | + | chr8_1:76964608-76964627 | Msa1215630:CDS | 40.0% | |
| TGTGATAAACTGTGATCCAG+CGG | - | chr8_1:76964771-76964790 | None:intergenic | 40.0% | |
| CAGTTTATCACACATACCAC+AGG | + | chr8_1:76964779-76964798 | Msa1215630:CDS | 40.0% | |
| GCAACACCAATAGACACAAA+GGG | + | chr8_1:76964830-76964849 | Msa1215630:CDS | 40.0% | |
| AAATCTTTGCAGTTGCTCCA+TGG | - | chr8_1:76964942-76964961 | None:intergenic | 40.0% | |
| GCAACTGCAAAGATTTGATC+TGG | + | chr8_1:76964946-76964965 | Msa1215630:CDS | 40.0% | |
| ! | CAGCTTTTTGACCGTTTACA+TGG | + | chr8_1:76964989-76965008 | Msa1215630:CDS | 40.0% |
| CTACTGTCTTCTGATTTCTC+AGG | - | chr8_1:76965082-76965101 | None:intergenic | 40.0% | |
| GAAATCAGAAGACAGTAGTG+TGG | + | chr8_1:76965084-76965103 | Msa1215630:CDS | 40.0% | |
| ! | ATCTTCTTTTTCCAATGCCG+TGG | + | chr8_1:76965108-76965127 | Msa1215630:CDS | 40.0% |
| CTAAGACAGTGTGACCTTGA+CGG | - | chr8_1:76962780-76962799 | None:intergenic | 45.0% | |
| GTGTTCTTCGCAGAGATCAT+CGG | - | chr8_1:76962866-76962885 | None:intergenic | 45.0% | |
| CTCCGTTTGAGTCGTTGAAA+TGG | - | chr8_1:76962949-76962968 | None:intergenic | 45.0% | |
| CGTTGACGTTCTTTCAGTCA+AGG | + | chr8_1:76962978-76962997 | Msa1215630:intron | 45.0% | |
| ! | TGGAAGAGAAGGGTGTAGAA+TGG | + | chr8_1:76963185-76963204 | Msa1215630:CDS | 45.0% |
| ! | AAGAGAAGGGTGTAGAATGG+TGG | + | chr8_1:76963188-76963207 | Msa1215630:CDS | 45.0% |
| TTTGGAGATGTTGGAGAGGT+TGG | + | chr8_1:76963413-76963432 | Msa1215630:CDS | 45.0% | |
| GATGTTGGAGAGGTTGGATT+TGG | + | chr8_1:76963419-76963438 | Msa1215630:CDS | 45.0% | |
| !!! | GAGGTTGGATTTGGCTTTTG+AGG | + | chr8_1:76963428-76963447 | Msa1215630:CDS | 45.0% |
| TGTGAGGAAGCAGTTGTTTG+AGG | + | chr8_1:76963488-76963507 | Msa1215630:CDS | 45.0% | |
| GACCATGCTTTCTGACTACA+TGG | - | chr8_1:76963551-76963570 | None:intergenic | 45.0% | |
| TTCTTGTGCGGGTATGATAG+GGG | + | chr8_1:76963885-76963904 | Msa1215630:intron | 45.0% | |
| !! | ATCAAATGGTTCTGGCCAGT+CGG | + | chr8_1:76964208-76964227 | Msa1215630:CDS | 45.0% |
| CTCTGTACTCACCCTATGTT+TGG | + | chr8_1:76964578-76964597 | Msa1215630:CDS | 45.0% | |
| GGCCAGAGAGTGGAAAAAAT+GGG | + | chr8_1:76964600-76964619 | Msa1215630:CDS | 45.0% | |
| !!! | CACCCATTTTTTCCACTCTC+TGG | - | chr8_1:76964605-76964624 | None:intergenic | 45.0% |
| CAGAGAGTGGAAAAAATGGG+TGG | + | chr8_1:76964603-76964622 | Msa1215630:CDS | 45.0% | |
| GAGTGGAAAAAATGGGTGGA+AGG | + | chr8_1:76964607-76964626 | Msa1215630:CDS | 45.0% | |
| TGTCATGTGCCGAACATGAT+TGG | + | chr8_1:76964741-76964760 | Msa1215630:CDS | 45.0% | |
| GGCAACACCAATAGACACAA+AGG | + | chr8_1:76964829-76964848 | Msa1215630:CDS | 45.0% | |
| ! | AGTTTGGTGGAGAATACTGG+TGG | + | chr8_1:76964869-76964888 | Msa1215630:CDS | 45.0% |
| ! | GTTTGGTGGAGAATACTGGT+GGG | + | chr8_1:76964870-76964889 | Msa1215630:CDS | 45.0% |
| TTTGGTGGAGAATACTGGTG+GGG | + | chr8_1:76964871-76964890 | Msa1215630:CDS | 45.0% | |
| TCAGGCAACATAGATCTCTC+TGG | - | chr8_1:76965064-76965083 | None:intergenic | 45.0% | |
| TCATATAGCATCCACGGCAT+TGG | - | chr8_1:76965122-76965141 | None:intergenic | 45.0% | |
| TTTGAACGACGGTGAGTGGA+AGG | - | chr8_1:76962522-76962541 | None:intergenic | 50.0% | |
| AAATGTAGGGTTCAGGCGAG+TGG | - | chr8_1:76962564-76962583 | None:intergenic | 50.0% | |
| GGGGAAATGGAGATGGAGAA+TGG | - | chr8_1:76962587-76962606 | None:intergenic | 50.0% | |
| GAAAGAGGGGGAAATGGAGA+TGG | - | chr8_1:76962594-76962613 | None:intergenic | 50.0% | |
| ACGGTTGAAAGAGGGGGAAA+TGG | - | chr8_1:76962600-76962619 | None:intergenic | 50.0% | |
| TGGTGGAACGGTTGAAAGAG+GGG | - | chr8_1:76962607-76962626 | None:intergenic | 50.0% | |
| ! | GTGGTGGAACGGTTGAAAGA+GGG | - | chr8_1:76962608-76962627 | None:intergenic | 50.0% |
| !! | AATGGTGAGGGGTTTTGTGG+TGG | - | chr8_1:76962627-76962646 | None:intergenic | 50.0% |
| TCAATTGCGCGAATGGTGAG+GGG | - | chr8_1:76962638-76962657 | None:intergenic | 50.0% | |
| GTCAATTGCGCGAATGGTGA+GGG | - | chr8_1:76962639-76962658 | None:intergenic | 50.0% | |
| CCACTCTCAGGTCCAAACAT+AGG | - | chr8_1:76963066-76963085 | None:intergenic | 50.0% | |
| CCTATGTTTGGACCTGAGAG+TGG | + | chr8_1:76963063-76963082 | Msa1215630:CDS | 50.0% | |
| AGTGGAAGCAATGGCTGGAA+AGG | + | chr8_1:76963081-76963100 | Msa1215630:CDS | 50.0% | |
| TCTTGTGCGGGTATGATAGG+GGG | + | chr8_1:76963886-76963905 | Msa1215630:intron | 50.0% | |
| TCTGCTGATGCCAGACTACA+TGG | + | chr8_1:76964176-76964195 | Msa1215630:CDS | 50.0% | |
| CAGACTACTCTGATGTGGCT+CGG | + | chr8_1:76964339-76964358 | Msa1215630:CDS | 50.0% | |
| AGACTACTCTGATGTGGCTC+GGG | + | chr8_1:76964340-76964359 | Msa1215630:CDS | 50.0% | |
| ! | TCTGATGTGGCTCGGGAATT+GGG | + | chr8_1:76964347-76964366 | Msa1215630:CDS | 50.0% |
| CATTGCCTATGCAGAGGTTG+AGG | + | chr8_1:76964468-76964487 | Msa1215630:CDS | 50.0% | |
| CTTCTCCTCAACCTCTGCAT+AGG | - | chr8_1:76964476-76964495 | None:intergenic | 50.0% | |
| CACTCTCTGGCCCAAACATA+GGG | - | chr8_1:76964592-76964611 | None:intergenic | 50.0% | |
| GGGCCAGAGAGTGGAAAAAA+TGG | + | chr8_1:76964599-76964618 | Msa1215630:CDS | 50.0% | |
| !! | TTCCAAAGAAGGGTGCCGAA+TGG | + | chr8_1:76964712-76964731 | Msa1215630:CDS | 50.0% |
| AACCATTCGGCACCCTTCTT+TGG | - | chr8_1:76964717-76964736 | None:intergenic | 50.0% | |
| AGCGGCATGCCAATCATGTT+CGG | - | chr8_1:76964753-76964772 | None:intergenic | 50.0% | |
| !! | GCGTTTTGAACGACGGTGAG+TGG | - | chr8_1:76962526-76962545 | None:intergenic | 55.0% |
| !! | TGCGACGGCGTTTTGAACGA+CGG | - | chr8_1:76962533-76962552 | None:intergenic | 55.0% |
| CGAGTGGTGGTTGAATGCGA+CGG | - | chr8_1:76962548-76962567 | None:intergenic | 55.0% | |
| GGTGGAACGGTTGAAAGAGG+GGG | - | chr8_1:76962606-76962625 | None:intergenic | 55.0% | |
| !! | GGTGGTGGAACGGTTGAAAG+AGG | - | chr8_1:76962609-76962628 | None:intergenic | 55.0% |
| !!! | GGGGTTTTGTGGTGGTGGAA+CGG | - | chr8_1:76962619-76962638 | None:intergenic | 55.0% |
| ! | GCGAATGGTGAGGGGTTTTG+TGG | - | chr8_1:76962630-76962649 | None:intergenic | 55.0% |
| CGTCAATTGCGCGAATGGTG+AGG | - | chr8_1:76962640-76962659 | None:intergenic | 55.0% | |
| TGCTGCGTCAATTGCGCGAA+TGG | - | chr8_1:76962645-76962664 | None:intergenic | 55.0% | |
| ! | AGTGTGACCTTGACGGACGA+AGG | - | chr8_1:76962773-76962792 | None:intergenic | 55.0% |
| TTGAGCGACGGCGGAGTAAT+CGG | - | chr8_1:76962815-76962834 | None:intergenic | 55.0% | |
| TCCGCCGTCGCTCAAAACAT+CGG | + | chr8_1:76962820-76962839 | Msa1215630:CDS | 55.0% | |
| !! | GACGCCGATGTTTTGAGCGA+CGG | - | chr8_1:76962827-76962846 | None:intergenic | 55.0% |
| CGCAGAGATCATCGGCGTTA+GGG | - | chr8_1:76962858-76962877 | None:intergenic | 55.0% | |
| TCGCAGAGATCATCGGCGTT+AGG | - | chr8_1:76962859-76962878 | None:intergenic | 55.0% | |
| GGACCTGAGAGTGGAAGCAA+TGG | + | chr8_1:76963072-76963091 | Msa1215630:CDS | 55.0% | |
| CAGCCATTGCTTCCACTCTC+AGG | - | chr8_1:76963078-76963097 | None:intergenic | 55.0% | |
| CTGAGAGTGGAAGCAATGGC+TGG | + | chr8_1:76963076-76963095 | Msa1215630:CDS | 55.0% | |
| GCTTTGTGCTGTCATCCGAC+TGG | - | chr8_1:76964226-76964245 | None:intergenic | 55.0% | |
| ! | CTCTGATGTGGCTCGGGAAT+TGG | + | chr8_1:76964346-76964365 | Msa1215630:CDS | 55.0% |
| CCACTCTCTGGCCCAAACAT+AGG | - | chr8_1:76964593-76964612 | None:intergenic | 55.0% | |
| CCTATGTTTGGGCCAGAGAG+TGG | + | chr8_1:76964590-76964609 | Msa1215630:CDS | 55.0% | |
| GAACATGATTGGCATGCCGC+TGG | + | chr8_1:76964752-76964771 | Msa1215630:CDS | 55.0% | |
| TGTAGGGTTCAGGCGAGTGG+TGG | - | chr8_1:76962561-76962580 | None:intergenic | 60.0% | |
| !! | GGTGAGGGGTTTTGTGGTGG+TGG | - | chr8_1:76962624-76962643 | None:intergenic | 60.0% |
| GCTACCACCTTCGTCCGTCA+AGG | + | chr8_1:76962763-76962782 | Msa1215630:intron | 60.0% | |
| ! | GTGACCTTGACGGACGAAGG+TGG | - | chr8_1:76962770-76962789 | None:intergenic | 60.0% |
| GACGGCGGAGTAATCGGAAC+GGG | - | chr8_1:76962809-76962828 | None:intergenic | 60.0% | |
| CGACGGCGGAGTAATCGGAA+CGG | - | chr8_1:76962810-76962829 | None:intergenic | 60.0% | |
| !! | GCCGATGTTTTGAGCGACGG+CGG | - | chr8_1:76962824-76962843 | None:intergenic | 60.0% |
| TGCGGGTATGATAGGGGGAG+TGG | + | chr8_1:76963891-76963910 | Msa1215630:intron | 60.0% | |
| ! | GACGGACGAAGGTGGTAGCG+AGG | - | chr8_1:76962762-76962781 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 76962503 | 76965321 | 76962503 | ID=Msa1215630;Name=Msa1215630 |
| chr8_1 | mRNA | 76962503 | 76965321 | 76962503 | ID=Msa1215630-mRNA-1;Parent=Msa1215630;Name=Msa1215630-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0.14|1|0.33|0.14|7|180|640 |
| chr8_1 | exon | 76962503 | 76962737 | 76962503 | ID=Msa1215630-mRNA-1:exon:26495;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76962785 | 76962967 | 76962785 | ID=Msa1215630-mRNA-1:exon:26496;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76962995 | 76963113 | 76962995 | ID=Msa1215630-mRNA-1:exon:26497;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76963127 | 76963152 | 76963127 | ID=Msa1215630-mRNA-1:exon:26498;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76963161 | 76963325 | 76963161 | ID=Msa1215630-mRNA-1:exon:26499;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76963362 | 76963589 | 76963362 | ID=Msa1215630-mRNA-1:exon:26500;Parent=Msa1215630-mRNA-1 |
| chr8_1 | exon | 76964175 | 76965321 | 76964175 | ID=Msa1215630-mRNA-1:exon:26501;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76962503 | 76962737 | 76962503 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76962785 | 76962967 | 76962785 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76962995 | 76963113 | 76962995 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76963127 | 76963152 | 76963127 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76963161 | 76963325 | 76963161 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76963362 | 76963589 | 76963362 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | CDS | 76964175 | 76965141 | 76964175 | ID=Msa1215630-mRNA-1:cds;Parent=Msa1215630-mRNA-1 |
| chr8_1 | three_prime_UTR | 76965142 | 76965321 | 76965142 | ID=Msa1215630-mRNA-1:three_prime_utr;Parent=Msa1215630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
