Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332470 | sp|O23310|NFYB3_ARATH | 76.068 | 117 | 22 | 2 | 1 | 113 | 1 | 115 | 4.95e-56 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332470 | I3TAW6 | 96.154 | 130 | 5 | 0 | 1 | 130 | 1 | 130 | 1.66e-83 | 258 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1332470 | TF | NF-YB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1332470 | Msa1389150 | 0.895818 | 6.677074e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332470 | MtrunA17_Chr4g0076321 | 96.154 | 130 | 5 | 0 | 1 | 130 | 1 | 130 | 3.19e-87 | 258 |
| Msa1332470 | MtrunA17_Chr2g0290491 | 75.385 | 130 | 27 | 2 | 1 | 130 | 1 | 125 | 4.52e-62 | 195 |
| Msa1332470 | MtrunA17_Chr3g0102351 | 72.358 | 123 | 22 | 2 | 1 | 113 | 1 | 121 | 6.17e-56 | 180 |
| Msa1332470 | MtrunA17_Chr5g0446491 | 75.000 | 120 | 26 | 2 | 1 | 116 | 1 | 120 | 6.34e-56 | 180 |
| Msa1332470 | MtrunA17_Chr8g0382931 | 81.443 | 97 | 18 | 0 | 20 | 116 | 29 | 125 | 4.11e-51 | 168 |
| Msa1332470 | MtrunA17_Chr8g0384451 | 79.787 | 94 | 19 | 0 | 20 | 113 | 41 | 134 | 4.83e-51 | 168 |
| Msa1332470 | MtrunA17_Chr2g0296321 | 56.164 | 146 | 60 | 2 | 6 | 147 | 51 | 196 | 3.37e-49 | 165 |
| Msa1332470 | MtrunA17_Chr1g0185911 | 69.748 | 119 | 31 | 3 | 10 | 127 | 22 | 136 | 4.54e-49 | 162 |
| Msa1332470 | MtrunA17_Chr7g0263601 | 69.027 | 113 | 32 | 1 | 20 | 129 | 27 | 139 | 5.97e-49 | 161 |
| Msa1332470 | MtrunA17_Chr4g0067091 | 69.159 | 107 | 28 | 1 | 4 | 110 | 12 | 113 | 5.18e-48 | 160 |
| Msa1332470 | MtrunA17_Chr1g0195851 | 74.468 | 94 | 24 | 0 | 20 | 113 | 37 | 130 | 5.24e-48 | 160 |
| Msa1332470 | MtrunA17_Chr4g0076381 | 67.021 | 94 | 31 | 0 | 20 | 113 | 59 | 152 | 4.82e-42 | 146 |
| Msa1332470 | MtrunA17_Chr1g0191981 | 64.444 | 90 | 32 | 0 | 21 | 110 | 6 | 95 | 6.08e-39 | 134 |
| Msa1332470 | MtrunA17_Chr1g0165041 | 58.000 | 100 | 40 | 1 | 13 | 112 | 2 | 99 | 4.18e-37 | 131 |
| Msa1332470 | MtrunA17_Chr1g0159271 | 53.165 | 79 | 37 | 0 | 33 | 111 | 1 | 79 | 7.64e-22 | 89.0 |
| Msa1332470 | MtrunA17_Chr5g0446601 | 45.370 | 108 | 54 | 2 | 3 | 107 | 7 | 112 | 1.15e-21 | 90.9 |
| Msa1332470 | MtrunA17_Chr1g0158951 | 47.500 | 80 | 37 | 1 | 49 | 123 | 19 | 98 | 1.81e-17 | 77.0 |
| Msa1332470 | MtrunA17_Chr1g0159291 | 40.000 | 80 | 48 | 0 | 20 | 99 | 3 | 82 | 1.96e-16 | 73.6 |
| Msa1332470 | MtrunA17_Chr2g0307551 | 30.952 | 84 | 58 | 0 | 24 | 107 | 16 | 99 | 2.15e-11 | 61.6 |
| Msa1332470 | MtrunA17_Chr4g0062271 | 30.952 | 84 | 58 | 0 | 24 | 107 | 16 | 99 | 4.14e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1332470 | AT4G14540.1 | 76.068 | 117 | 22 | 2 | 1 | 113 | 1 | 115 | 5.03e-57 | 182 |
| Msa1332470 | AT5G47640.1 | 82.979 | 94 | 16 | 0 | 20 | 113 | 28 | 121 | 4.73e-52 | 171 |
| Msa1332470 | AT2G38880.3 | 65.323 | 124 | 39 | 3 | 9 | 130 | 12 | 133 | 2.67e-49 | 162 |
| Msa1332470 | AT2G38880.2 | 65.323 | 124 | 39 | 3 | 9 | 130 | 12 | 133 | 3.97e-49 | 161 |
| Msa1332470 | AT2G38880.1 | 65.323 | 124 | 39 | 3 | 9 | 130 | 12 | 133 | 3.97e-49 | 161 |
| Msa1332470 | AT2G38880.5 | 65.323 | 124 | 39 | 3 | 9 | 130 | 12 | 133 | 3.97e-49 | 161 |
| Msa1332470 | AT2G47810.1 | 76.596 | 94 | 22 | 0 | 20 | 113 | 52 | 145 | 8.81e-49 | 161 |
| Msa1332470 | AT2G13570.1 | 76.596 | 94 | 22 | 0 | 20 | 113 | 37 | 130 | 7.11e-48 | 160 |
| Msa1332470 | AT3G53340.5 | 74.194 | 93 | 24 | 0 | 20 | 112 | 30 | 122 | 2.66e-47 | 158 |
| Msa1332470 | AT3G53340.1 | 74.194 | 93 | 24 | 0 | 20 | 112 | 30 | 122 | 2.66e-47 | 158 |
| Msa1332470 | AT2G37060.2 | 69.725 | 109 | 29 | 2 | 7 | 112 | 16 | 123 | 8.79e-47 | 156 |
| Msa1332470 | AT2G37060.3 | 69.725 | 109 | 29 | 2 | 7 | 112 | 16 | 123 | 8.79e-47 | 156 |
| Msa1332470 | AT2G37060.1 | 69.725 | 109 | 29 | 2 | 7 | 112 | 16 | 123 | 8.79e-47 | 156 |
| Msa1332470 | AT2G38880.7 | 63.415 | 123 | 41 | 3 | 9 | 130 | 12 | 131 | 1.87e-46 | 154 |
| Msa1332470 | AT2G38880.4 | 71.845 | 103 | 26 | 2 | 8 | 109 | 11 | 111 | 2.22e-46 | 153 |
| Msa1332470 | AT2G38880.9 | 72.549 | 102 | 25 | 2 | 9 | 109 | 12 | 111 | 2.95e-46 | 154 |
| Msa1332470 | AT2G38880.10 | 72.549 | 102 | 25 | 2 | 9 | 109 | 12 | 111 | 2.95e-46 | 154 |
| Msa1332470 | AT2G38880.6 | 72.549 | 102 | 25 | 2 | 9 | 109 | 12 | 111 | 2.95e-46 | 154 |
| Msa1332470 | AT2G38880.11 | 72.549 | 102 | 25 | 2 | 9 | 109 | 12 | 111 | 1.05e-45 | 153 |
| Msa1332470 | AT2G38880.8 | 72.549 | 102 | 25 | 2 | 9 | 109 | 12 | 111 | 1.05e-45 | 153 |
| Msa1332470 | AT3G53340.4 | 73.333 | 90 | 24 | 0 | 20 | 109 | 30 | 119 | 1.18e-45 | 152 |
| Msa1332470 | AT3G53340.3 | 73.626 | 91 | 24 | 0 | 20 | 110 | 30 | 120 | 2.02e-45 | 152 |
| Msa1332470 | AT3G53340.2 | 73.626 | 91 | 24 | 0 | 20 | 110 | 30 | 120 | 2.02e-45 | 152 |
| Msa1332470 | AT5G47670.2 | 50.000 | 140 | 68 | 2 | 20 | 159 | 30 | 167 | 5.32e-42 | 145 |
| Msa1332470 | AT5G47670.1 | 50.000 | 140 | 68 | 2 | 20 | 159 | 59 | 196 | 1.28e-41 | 145 |
| Msa1332470 | AT5G47670.3 | 50.000 | 140 | 68 | 2 | 20 | 159 | 59 | 196 | 1.28e-41 | 145 |
| Msa1332470 | AT1G09030.1 | 59.633 | 109 | 41 | 1 | 20 | 125 | 4 | 112 | 2.01e-41 | 141 |
| Msa1332470 | AT1G21970.1 | 58.163 | 98 | 41 | 0 | 20 | 117 | 60 | 157 | 4.11e-38 | 136 |
| Msa1332470 | AT5G08190.2 | 35.052 | 97 | 61 | 1 | 24 | 118 | 16 | 112 | 2.25e-15 | 73.2 |
| Msa1332470 | AT5G08190.1 | 34.694 | 98 | 61 | 2 | 24 | 118 | 16 | 113 | 1.04e-13 | 68.6 |
| Msa1332470 | AT5G23090.4 | 30.928 | 97 | 65 | 1 | 24 | 118 | 16 | 112 | 1.67e-12 | 65.1 |
| Msa1332470 | AT5G23090.5 | 32.584 | 89 | 58 | 1 | 24 | 110 | 16 | 104 | 7.50e-12 | 63.2 |
| Msa1332470 | AT5G23090.2 | 32.584 | 89 | 58 | 1 | 24 | 110 | 16 | 104 | 7.50e-12 | 63.2 |
| Msa1332470 | AT5G23090.1 | 32.584 | 89 | 58 | 1 | 24 | 110 | 16 | 104 | 7.50e-12 | 63.2 |
Find 83 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTGATTCACTAACCTTTC+TGG | 0.144636 | 8_4:-52422260 | None:intergenic |
| CTTCCGTTCAAAGGAGAATT+AGG | 0.270664 | 8_4:-52424469 | None:intergenic |
| GATGAAGTGACTAACTTCTT+TGG | 0.285324 | 8_4:+52424000 | Msa1332470:CDS |
| GAATCAGGTGGTAAAGCTTC+AGG | 0.307857 | 8_4:+52420748 | Msa1332470:CDS |
| GGCGGTGGCGTTGGTGTTGA+TGG | 0.326270 | 8_4:-52422005 | None:intergenic |
| TTCTTGGGTGTTGCTGCCTC+AGG | 0.354609 | 8_4:+52423363 | Msa1332470:CDS |
| GGGTTACCTTCACAAGTATA+GGG | 0.382046 | 8_4:+52421029 | Msa1332470:CDS |
| GATCATGAAGAAAGCTTTAC+CGG | 0.392387 | 8_4:+52420822 | Msa1332470:CDS |
| AGAATATGCAGAGCCTCTTA+AGG | 0.393028 | 8_4:+52421008 | Msa1332470:CDS |
| CGGAGGCGCGGCGGTGGCGT+TGG | 0.394745 | 8_4:-52422014 | None:intergenic |
| GAGAGACAGGGAGAGGGATA+AGG | 0.404052 | 8_4:-52422125 | None:intergenic |
| GAGATGAGGTTTCGAGAGAC+AGG | 0.418046 | 8_4:-52422138 | None:intergenic |
| GAGAGAGAGGGTGTGATGGC+GGG | 0.423053 | 8_4:-52422059 | None:intergenic |
| TGTTGAAGCGTTCAGTTAAC+CGG | 0.428959 | 8_4:+52423312 | Msa1332470:intron |
| AGGGTTACCTTCACAAGTAT+AGG | 0.429699 | 8_4:+52421028 | Msa1332470:CDS |
| TGATGGCGGAGGCGCGGCGG+TGG | 0.429757 | 8_4:-52422020 | None:intergenic |
| GAGAGGGATAAGGGAGATTG+AGG | 0.436301 | 8_4:-52422115 | None:intergenic |
| TAACCGGTAGGTCGCGTGAC+TGG | 0.438081 | 8_4:+52423328 | Msa1332470:CDS |
| AGAGAGAGAGGGTGTGATGG+CGG | 0.453330 | 8_4:-52422060 | None:intergenic |
| TTCGATATCTTTGCTCTCGC+CGG | 0.458504 | 8_4:-52420841 | None:intergenic |
| AAGAAGTTAGTCACTTCATC+AGG | 0.458763 | 8_4:-52423997 | None:intergenic |
| GAGTTCATAAGCTTCATAAC+AGG | 0.460674 | 8_4:+52420898 | Msa1332470:CDS |
| AGAGGGATAAGGGAGATTGA+GGG | 0.465506 | 8_4:-52422114 | None:intergenic |
| AGAGACAGGGAGAGGGATAA+GGG | 0.467694 | 8_4:-52422124 | None:intergenic |
| GGGTGATGAAGGCGAGATTG+AGG | 0.470460 | 8_4:-52422094 | None:intergenic |
| GATCCTACCAACGTTTGCTA+TGG | 0.475579 | 8_4:-52420803 | None:intergenic |
| GCAGAATCAGATGATGAATC+AGG | 0.475967 | 8_4:+52420733 | Msa1332470:CDS |
| GAGAAGAGGAAGACAATAAA+CGG | 0.477283 | 8_4:+52420946 | Msa1332470:CDS |
| TTGTGAAGGTAACCCTTAAG+AGG | 0.483388 | 8_4:-52421021 | None:intergenic |
| CAATTTCCCTATACTTGTGA+AGG | 0.485169 | 8_4:-52421035 | None:intergenic |
| TGAGGTTGACGAAGGTGAGA+GGG | 0.487941 | 8_4:-52422160 | None:intergenic |
| GAATATGCAGAGCCTCTTAA+GGG | 0.488554 | 8_4:+52421009 | Msa1332470:CDS |
| AGGGAGATTGAGGGTGATGA+AGG | 0.489055 | 8_4:-52422105 | None:intergenic |
| TGGTGTTGATGGCGGAGGCT+TGG | 0.492204 | 8_4:-52421994 | None:intergenic |
| TGCTCAGTAATATTAGATAT+AGG | 0.496069 | 8_4:-52423943 | None:intergenic |
| TTGAGGTTGACGAAGGTGAG+AGG | 0.500803 | 8_4:-52422161 | None:intergenic |
| GTAGGTCGCGTGACTGGAAG+TGG | 0.505525 | 8_4:+52423334 | Msa1332470:CDS |
| AGTGGCGGCGAGGGAGATTG+AGG | 0.507297 | 8_4:-52422178 | None:intergenic |
| AATTCTCCTTTGAACGGAAG+AGG | 0.508570 | 8_4:+52424472 | Msa1332470:CDS |
| TGTCTTGGACTCTTCTAGGA+TGG | 0.512896 | 8_4:+52423900 | Msa1332470:CDS |
| GAATATGATTGGTAGTAGTA+AGG | 0.514281 | 8_4:+52421080 | Msa1332470:CDS |
| GCAGAGAATTACTGCAAGAA+AGG | 0.517934 | 8_4:+52420773 | Msa1332470:CDS |
| TATATTGATCGATTCTTCCA+AGG | 0.518421 | 8_4:+52421116 | Msa1332470:CDS |
| TGGGTGTGATGGCGGAGGCG+CGG | 0.521311 | 8_4:-52422026 | None:intergenic |
| GGCGTTGGTGTTGATGGCGG+AGG | 0.526265 | 8_4:-52421999 | None:intergenic |
| GCCACAGGTTTCCGCTGCAA+AGG | 0.529470 | 8_4:+52423873 | Msa1332470:CDS |
| CATGATCCTCTTCCGTTCAA+AGG | 0.530148 | 8_4:-52424478 | None:intergenic |
| AATCAGGTGGTAAAGCTTCA+GGG | 0.531597 | 8_4:+52420749 | Msa1332470:CDS |
| CACAAGTATAGGGAAATTGA+AGG | 0.531636 | 8_4:+52421039 | Msa1332470:CDS |
| AACGGAAGAGGATCATGTGT+TGG | 0.533337 | 8_4:+52424484 | Msa1332470:CDS |
| ATCCTACCAACGTTTGCTAT+GGG | 0.537868 | 8_4:-52420802 | None:intergenic |
| AGAAACAAAAGTGGCGGCGA+GGG | 0.539643 | 8_4:-52422187 | None:intergenic |
| ACGAAGGTGAGAGGGAGATG+AGG | 0.539651 | 8_4:-52422152 | None:intergenic |
| CTTCAGAACATACTTGCCAC+AGG | 0.543157 | 8_4:+52423858 | Msa1332470:intron |
| CACTAGAAATCCATCCAGAA+AGG | 0.544220 | 8_4:+52422246 | Msa1332470:CDS |
| AGGTTTCGAGAGACAGGGAG+AGG | 0.547063 | 8_4:-52422132 | None:intergenic |
| GATTCACTAACCTTTCTGGA+TGG | 0.548144 | 8_4:-52422256 | None:intergenic |
| AAAAGTGTCAGAAAGAGAAG+AGG | 0.551950 | 8_4:+52420932 | Msa1332470:CDS |
| TTCAAAGCCAAGTGTAGTCA+TGG | 0.563942 | 8_4:-52420986 | None:intergenic |
| GTGTGGGCCATGACTACACT+TGG | 0.565546 | 8_4:+52420979 | Msa1332470:CDS |
| TGTAGTGGGTGTGATGGCGG+AGG | 0.567911 | 8_4:-52422031 | None:intergenic |
| CTTCCAGTCACGCGACCTAC+CGG | 0.577781 | 8_4:-52423331 | None:intergenic |
| GTGTGATGGCGGAGGCGCGG+CGG | 0.578582 | 8_4:-52422023 | None:intergenic |
| GAGCCTAATTCTCCTTTGAA+CGG | 0.579217 | 8_4:+52424466 | Msa1332470:CDS |
| TACCAACGTTTGCTATGGGA+AGG | 0.599059 | 8_4:-52420798 | None:intergenic |
| GGTTTCGAGAGACAGGGAGA+GGG | 0.609172 | 8_4:-52422131 | None:intergenic |
| TTCCCATAGCAAACGTTGGT+AGG | 0.621000 | 8_4:+52420800 | Msa1332470:CDS |
| CTCCTTCCCATAGCAAACGT+TGG | 0.626066 | 8_4:+52420796 | Msa1332470:CDS |
| TCTAGTGAGAATCTAGAGTG+TGG | 0.627023 | 8_4:-52422230 | None:intergenic |
| GGTGGCGTTGGTGTTGATGG+CGG | 0.627465 | 8_4:-52422002 | None:intergenic |
| AAGATTCTGAGAAACAAAAG+TGG | 0.630865 | 8_4:-52422196 | None:intergenic |
| ACCTTTGCAGCGGAAACCTG+TGG | 0.636071 | 8_4:-52423874 | None:intergenic |
| AGATGAGGTTTCGAGAGACA+GGG | 0.637212 | 8_4:-52422137 | None:intergenic |
| GAGAAACAAAAGTGGCGGCG+AGG | 0.641499 | 8_4:-52422188 | None:intergenic |
| GAAGCGTTCAGTTAACCGGT+AGG | 0.641958 | 8_4:+52423316 | Msa1332470:intron |
| GGTAGTAGTAAGGAGCAGCA+AGG | 0.645799 | 8_4:+52421090 | Msa1332470:CDS |
| TAGGTCGCGTGACTGGAAGT+GGG | 0.646015 | 8_4:+52423335 | Msa1332470:CDS |
| TAAACGGTGATGATCTTGTG+TGG | 0.661494 | 8_4:+52420962 | Msa1332470:CDS |
| AGGGAGATTGAGGTTGACGA+AGG | 0.663780 | 8_4:-52422168 | None:intergenic |
| ATTCTGAGAAACAAAAGTGG+CGG | 0.678264 | 8_4:-52422193 | None:intergenic |
| AAACGGTGATGATCTTGTGT+GGG | 0.691215 | 8_4:+52420963 | Msa1332470:CDS |
| GCCACATCACCTAAAACCTG+AGG | 0.693839 | 8_4:-52423379 | None:intergenic |
| GAATCAGATGATGAATCAGG+TGG | 0.708914 | 8_4:+52420736 | Msa1332470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAGAATTATAAATATATT+AGG | + | chr8_4:52422987-52423006 | Msa1332470:intron | 10.0% |
| !! | ATTCTTCAAAAAAAAAAATA+AGG | - | chr8_4:52423016-52423035 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTGAAGAATTATT+AGG | + | chr8_4:52423020-52423039 | Msa1332470:intron | 10.0% |
| !!! | TGTTATTTTACATTTAATTT+AGG | + | chr8_4:52424158-52424177 | Msa1332470:intron | 10.0% |
| !!! | AATTTTTCTATGAATATGAT+TGG | + | chr8_4:52421069-52421088 | Msa1332470:CDS | 15.0% |
| !!! | AATTAATTTTAGTGATGATT+TGG | + | chr8_4:52421347-52421366 | Msa1332470:intron | 15.0% |
| !!! | GGTTTTTCTTAAATTATTAT+CGG | + | chr8_4:52421502-52421521 | Msa1332470:intron | 15.0% |
| !!! | CTATTATTTGTATTCTTTTA+TGG | - | chr8_4:52421760-52421779 | None:intergenic | 15.0% |
| !! | TTCCTAGTATAATATATAAA+TGG | + | chr8_4:52421791-52421810 | Msa1332470:intron | 15.0% |
| !! | ATCCATTTATATATTATACT+AGG | - | chr8_4:52421796-52421815 | None:intergenic | 15.0% |
| !! | ACAAATCAATATATAAACAT+GGG | - | chr8_4:52422288-52422307 | None:intergenic | 15.0% |
| !! | TACAAATCAATATATAAACA+TGG | - | chr8_4:52422289-52422308 | None:intergenic | 15.0% |
| !! | CAGAAAATTAATCAAATTTA+AGG | - | chr8_4:52422505-52422524 | None:intergenic | 15.0% |
| !! | TAAAATTGTCATAAATGTAT+GGG | + | chr8_4:52422918-52422937 | Msa1332470:intron | 15.0% |
| !!! | TTTAGTTTTTATTGTAGTTT+AGG | + | chr8_4:52423198-52423217 | Msa1332470:intron | 15.0% |
| !!! | TTAATTTATGCCTCTTTTTT+AGG | + | chr8_4:52421181-52421200 | Msa1332470:intron | 20.0% |
| !! | TATGATTACATTGAATTATG+TGG | + | chr8_4:52421481-52421500 | Msa1332470:intron | 20.0% |
| !!! | TAAGTTGCGATTTAAATTTT+AGG | + | chr8_4:52422315-52422334 | Msa1332470:intron | 20.0% |
| !!! | AAGTTGCGATTTAAATTTTA+GGG | + | chr8_4:52422316-52422335 | Msa1332470:intron | 20.0% |
| !! | ATCTAAACAAATCACAAAAT+CGG | - | chr8_4:52422393-52422412 | None:intergenic | 20.0% |
| !!! | ATTTGAGTTGTCTTAAAATT+GGG | + | chr8_4:52422417-52422436 | Msa1332470:intron | 20.0% |
| !! | TCAAATTTGTGATTCTAATT+TGG | + | chr8_4:52422475-52422494 | Msa1332470:intron | 20.0% |
| !! | CAAATTTGTGATTCTAATTT+GGG | + | chr8_4:52422476-52422495 | Msa1332470:intron | 20.0% |
| !! | AAATCCTAAATCGAAAAAAT+TGG | - | chr8_4:52422528-52422547 | None:intergenic | 20.0% |
| !!! | TTTTCGATTTAGGATTTATT+TGG | + | chr8_4:52422531-52422550 | Msa1332470:intron | 20.0% |
| !! | CTAAAATTGTCATAAATGTA+TGG | + | chr8_4:52422917-52422936 | Msa1332470:intron | 20.0% |
| !!! | TTCCTATTAAAATGTGTTTT+AGG | + | chr8_4:52423144-52423163 | Msa1332470:intron | 20.0% |
| !!! | TGAATTAATGTCTCTTTTTA+TGG | + | chr8_4:52423167-52423186 | Msa1332470:intron | 20.0% |
| !! | ACAATAAAAACTAAAATCAG+AGG | - | chr8_4:52423193-52423212 | None:intergenic | 20.0% |
| !!! | ACATTTTTGTTAGTCTAATT+AGG | + | chr8_4:52423471-52423490 | Msa1332470:intron | 20.0% |
| !! | ATTGTAGTATATGTTGAAAT+TGG | + | chr8_4:52423720-52423739 | Msa1332470:intron | 20.0% |
| !!! | TTACTTTTTCTGTAATTTTG+TGG | + | chr8_4:52424375-52424394 | Msa1332470:intron | 20.0% |
| ! | ACATTAAAAGCCTAAAAAAG+AGG | - | chr8_4:52421194-52421213 | None:intergenic | 25.0% |
| ! | ACAAAACAACAATAACAAAC+TGG | - | chr8_4:52421236-52421255 | None:intergenic | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | chr8_4:52421476-52421495 | None:intergenic | 25.0% |
| ! | AAAGAACCTAAATAATTGAG+TGG | + | chr8_4:52421702-52421721 | Msa1332470:intron | 25.0% |
| !!! | AAATTTTAGGGTTTCTGATT+TGG | + | chr8_4:52422328-52422347 | Msa1332470:intron | 25.0% |
| !!! | AATTTTAGGGTTTCTGATTT+GGG | + | chr8_4:52422329-52422348 | Msa1332470:intron | 25.0% |
| !!! | GATTTGAGTTGTCTTAAAAT+TGG | + | chr8_4:52422416-52422435 | Msa1332470:intron | 25.0% |
| !!! | TTTGAGTTGTCTTAAAATTG+GGG | + | chr8_4:52422418-52422437 | Msa1332470:intron | 25.0% |
| ! | AGAATCACAAATTTGAAGAT+GGG | - | chr8_4:52422471-52422490 | None:intergenic | 25.0% |
| ! | TAGAATCACAAATTTGAAGA+TGG | - | chr8_4:52422472-52422491 | None:intergenic | 25.0% |
| ! | ACACAAATACCATAAAGATA+GGG | - | chr8_4:52422613-52422632 | None:intergenic | 25.0% |
| ! | TACACAAATACCATAAAGAT+AGG | - | chr8_4:52422614-52422633 | None:intergenic | 25.0% |
| ! | TGATAGCATTTATCTGTTAA+TGG | - | chr8_4:52422722-52422741 | None:intergenic | 25.0% |
| ! | TTAGAACAAAATACCAAAGT+TGG | - | chr8_4:52422901-52422920 | None:intergenic | 25.0% |
| !!! | ATGGTATTTTAGTCTCTATT+GGG | + | chr8_4:52423063-52423082 | Msa1332470:intron | 25.0% |
| !!! | CACCTAAAACACATTTTAAT+AGG | - | chr8_4:52423149-52423168 | None:intergenic | 25.0% |
| ! | CCAATAAAGCAATTGATATT+TGG | - | chr8_4:52423750-52423769 | None:intergenic | 25.0% |
| ! | CCAAATATCAATTGCTTTAT+TGG | + | chr8_4:52423747-52423766 | Msa1332470:intron | 25.0% |
| ! | TCACATGTGAAATTGATATT+TGG | - | chr8_4:52423777-52423796 | None:intergenic | 25.0% |
| ! | TAAAGCAATAAAGCATGTTA+CGG | - | chr8_4:52423806-52423825 | None:intergenic | 25.0% |
| ! | TGCTCAGTAATATTAGATAT+AGG | - | chr8_4:52423946-52423965 | None:intergenic | 25.0% |
| ! | GTAAAATAACAAACTTCATC+AGG | - | chr8_4:52424149-52424168 | None:intergenic | 25.0% |
| !! | ACTAGTTTCATCTATCATAT+TGG | - | chr8_4:52424215-52424234 | None:intergenic | 25.0% |
| ! | GAATATGATTGGTAGTAGTA+AGG | + | chr8_4:52421080-52421099 | Msa1332470:CDS | 30.0% |
| ! | TATATTGATCGATTCTTCCA+AGG | + | chr8_4:52421116-52421135 | Msa1332470:CDS | 30.0% |
| GTTGCAAATATAATCAACCT+TGG | - | chr8_4:52421136-52421155 | None:intergenic | 30.0% | |
| !! | GTGATGATTTGGTATACATA+TGG | + | chr8_4:52421358-52421377 | Msa1332470:intron | 30.0% |
| TTCCTTTCAGGAAATAAGAT+TGG | + | chr8_4:52421389-52421408 | Msa1332470:intron | 30.0% | |
| ! | TACCAATCTTATTTCCTGAA+AGG | - | chr8_4:52421394-52421413 | None:intergenic | 30.0% |
| !! | TACTTTTTATCTGTGAAGCA+CGG | - | chr8_4:52421561-52421580 | None:intergenic | 30.0% |
| !! | TACGATTTTGACAGAAACTA+CGG | - | chr8_4:52421623-52421642 | None:intergenic | 30.0% |
| ATGTAGCCACTCAATTATTT+AGG | - | chr8_4:52421711-52421730 | None:intergenic | 30.0% | |
| CATGAACTAGTTACCAATTA+AGG | - | chr8_4:52421736-52421755 | None:intergenic | 30.0% | |
| ATAAGAGATGTTGCTCAAAA+AGG | + | chr8_4:52421814-52421833 | Msa1332470:intron | 30.0% | |
| TGCTCAAAAAGGAAAAAGAT+TGG | + | chr8_4:52421825-52421844 | Msa1332470:intron | 30.0% | |
| AAAATACCCATGTCACATAA+GGG | - | chr8_4:52421885-52421904 | None:intergenic | 30.0% | |
| AAAAATACCCATGTCACATA+AGG | - | chr8_4:52421886-52421905 | None:intergenic | 30.0% | |
| GAGAAGAAGAAAGTGAATAA+GGG | - | chr8_4:52421951-52421970 | None:intergenic | 30.0% | |
| AGAGAAGAAGAAAGTGAATA+AGG | - | chr8_4:52421952-52421971 | None:intergenic | 30.0% | |
| ! | AAGATTCTGAGAAACAAAAG+TGG | - | chr8_4:52422199-52422218 | None:intergenic | 30.0% |
| !!! | ATTTTAGGGTTTCTGATTTG+GGG | + | chr8_4:52422330-52422349 | Msa1332470:intron | 30.0% |
| ! | TGTCTTAAAATTGGGGATTT+TGG | + | chr8_4:52422425-52422444 | Msa1332470:intron | 30.0% |
| TTGAAGATGGGTACATAAAT+TGG | - | chr8_4:52422459-52422478 | None:intergenic | 30.0% | |
| !!! | TCTGCCAATTTTTTCGATTT+AGG | + | chr8_4:52422521-52422540 | Msa1332470:intron | 30.0% |
| AATAATCCTCCCTATCTTTA+TGG | + | chr8_4:52422601-52422620 | Msa1332470:intron | 30.0% | |
| ! | TTAACTCTGTCTGTAGATTT+TGG | + | chr8_4:52422660-52422679 | Msa1332470:intron | 30.0% |
| ! | TCAATGAACTGACTTATTCT+CGG | + | chr8_4:52422761-52422780 | Msa1332470:intron | 30.0% |
| GTGAGAAGAAGTAATATCTT+TGG | + | chr8_4:52422855-52422874 | Msa1332470:intron | 30.0% | |
| AGTACATAAATCTCCAACTT+TGG | + | chr8_4:52422885-52422904 | Msa1332470:intron | 30.0% | |
| !!! | CATGGTATTTTAGTCTCTAT+TGG | + | chr8_4:52423062-52423081 | Msa1332470:intron | 30.0% |
| ATCACTGACAAAAATATTGC+AGG | - | chr8_4:52423253-52423272 | None:intergenic | 30.0% | |
| AGACTAACAAAAATGTTGCA+GGG | - | chr8_4:52423467-52423486 | None:intergenic | 30.0% | |
| TAGACTAACAAAAATGTTGC+AGG | - | chr8_4:52423468-52423487 | None:intergenic | 30.0% | |
| ! | TTTGTTAGTCTAATTAGGAC+CGG | + | chr8_4:52423476-52423495 | Msa1332470:intron | 30.0% |
| TGTTTCATTCAGTTTAGAGA+GGG | + | chr8_4:52423506-52423525 | Msa1332470:intron | 30.0% | |
| ! | AAGACTATTTAAGAGGTATG+TGG | + | chr8_4:52423687-52423706 | Msa1332470:intron | 30.0% |
| AAAGCAATAAAGCATGTTAC+GGG | - | chr8_4:52423805-52423824 | None:intergenic | 30.0% | |
| CAAAGAAAGGAACAAAGATA+GGG | - | chr8_4:52424052-52424071 | None:intergenic | 30.0% | |
| TCAAAGAAAGGAACAAAGAT+AGG | - | chr8_4:52424053-52424072 | None:intergenic | 30.0% | |
| TGCATTATTTCGTCAAAGAA+AGG | - | chr8_4:52424065-52424084 | None:intergenic | 30.0% | |
| TTTCATCTATCATATTGGAC+AGG | - | chr8_4:52424210-52424229 | None:intergenic | 30.0% | |
| ACTAACATAAGGGTCATTAT+TGG | - | chr8_4:52424300-52424319 | None:intergenic | 30.0% | |
| TAATGACCCTTATGTTAGTT+TGG | + | chr8_4:52424301-52424320 | Msa1332470:intron | 30.0% | |
| ! | AAAGCACCAAACTAACATAA+GGG | - | chr8_4:52424310-52424329 | None:intergenic | 30.0% |
| !! | AAAAGCACCAAACTAACATA+AGG | - | chr8_4:52424311-52424330 | None:intergenic | 30.0% |
| GATCATGAAGAAAGCTTTAC+CGG | + | chr8_4:52420822-52420841 | Msa1332470:CDS | 35.0% | |
| GAGTTCATAAGCTTCATAAC+AGG | + | chr8_4:52420898-52420917 | Msa1332470:CDS | 35.0% | |
| !! | AAAAGTGTCAGAAAGAGAAG+AGG | + | chr8_4:52420932-52420951 | Msa1332470:CDS | 35.0% |
| GAGAAGAGGAAGACAATAAA+CGG | + | chr8_4:52420946-52420965 | Msa1332470:CDS | 35.0% | |
| CAATTTCCCTATACTTGTGA+AGG | - | chr8_4:52421038-52421057 | None:intergenic | 35.0% | |
| CACAAGTATAGGGAAATTGA+AGG | + | chr8_4:52421039-52421058 | Msa1332470:CDS | 35.0% | |
| !!! | ATGGCGTTTTTTTTCCTTTC+AGG | + | chr8_4:52421377-52421396 | Msa1332470:intron | 35.0% |
| GGAAATAAGATTGGTAAGCA+CGG | + | chr8_4:52421398-52421417 | Msa1332470:intron | 35.0% | |
| TCCTCGAATTAAGTGTATCT+TGG | + | chr8_4:52421425-52421444 | Msa1332470:intron | 35.0% | |
| ACCAAGATACACTTAATTCG+AGG | - | chr8_4:52421429-52421448 | None:intergenic | 35.0% | |
| ! | ACTTTTTATCTGTGAAGCAC+GGG | - | chr8_4:52421560-52421579 | None:intergenic | 35.0% |
| TTGAGTATCAGGAAGTTTGA+CGG | - | chr8_4:52421662-52421681 | None:intergenic | 35.0% | |
| AGTGGCTACATTTCCTTAAT+TGG | + | chr8_4:52421720-52421739 | Msa1332470:intron | 35.0% | |
| AAATACCCATGTCACATAAG+GGG | - | chr8_4:52421884-52421903 | None:intergenic | 35.0% | |
| GAAGAAAGTGAATAAGGGAA+TGG | - | chr8_4:52421946-52421965 | None:intergenic | 35.0% | |
| ! | ATTCTGAGAAACAAAAGTGG+CGG | - | chr8_4:52422196-52422215 | None:intergenic | 35.0% |
| TTGTGATTCACTAACCTTTC+TGG | - | chr8_4:52422263-52422282 | None:intergenic | 35.0% | |
| CAAATACCATAAAGATAGGG+AGG | - | chr8_4:52422610-52422629 | None:intergenic | 35.0% | |
| !!! | CTGTCTGTAGATTTTGGTTT+TGG | + | chr8_4:52422666-52422685 | Msa1332470:intron | 35.0% |
| CATTTCAACCCTCACATATA+GGG | - | chr8_4:52422836-52422855 | None:intergenic | 35.0% | |
| ACATTTCAACCCTCACATAT+AGG | - | chr8_4:52422837-52422856 | None:intergenic | 35.0% | |
| GATGTTATATGTAGCTCACT+TGG | + | chr8_4:52422940-52422959 | Msa1332470:intron | 35.0% | |
| TACCATGCAGCTGATTAATA+AGG | - | chr8_4:52423049-52423068 | None:intergenic | 35.0% | |
| CTGTTTCATTCAGTTTAGAG+AGG | + | chr8_4:52423505-52423524 | Msa1332470:intron | 35.0% | |
| GTTTCATTCAGTTTAGAGAG+GGG | + | chr8_4:52423507-52423526 | Msa1332470:intron | 35.0% | |
| ATGCAATGTACATCAACAAC+CGG | + | chr8_4:52423601-52423620 | Msa1332470:intron | 35.0% | |
| ATCGTCGAAGACTATTTAAG+AGG | + | chr8_4:52423680-52423699 | Msa1332470:intron | 35.0% | |
| AAGCAATAAAGCATGTTACG+GGG | - | chr8_4:52423804-52423823 | None:intergenic | 35.0% | |
| ! | TTTTTGTCTTGGACTCTTCT+AGG | + | chr8_4:52423896-52423915 | Msa1332470:CDS | 35.0% |
| AAGAAGTTAGTCACTTCATC+AGG | - | chr8_4:52424000-52424019 | None:intergenic | 35.0% | |
| GATGAAGTGACTAACTTCTT+TGG | + | chr8_4:52424000-52424019 | Msa1332470:CDS | 35.0% | |
| CTTTGACGAAATAATGCATC+AGG | + | chr8_4:52424067-52424086 | Msa1332470:intron | 35.0% | |
| CACAACAAGTAAAACATGAC+TGG | - | chr8_4:52424256-52424275 | None:intergenic | 35.0% | |
| TGAACTTCTGATGCAATTGT+AGG | + | chr8_4:52424274-52424293 | Msa1332470:intron | 35.0% | |
| !!! | GTTTGGTGCTTTTCTTAGTT+CGG | + | chr8_4:52424318-52424337 | Msa1332470:intron | 35.0% |
| GCAGAATCAGATGATGAATC+AGG | + | chr8_4:52420733-52420752 | Msa1332470:CDS | 40.0% | |
| GAATCAGATGATGAATCAGG+TGG | + | chr8_4:52420736-52420755 | Msa1332470:CDS | 40.0% | |
| AATCAGGTGGTAAAGCTTCA+GGG | + | chr8_4:52420749-52420768 | Msa1332470:CDS | 40.0% | |
| GCAGAGAATTACTGCAAGAA+AGG | + | chr8_4:52420773-52420792 | Msa1332470:CDS | 40.0% | |
| !! | ATCCTACCAACGTTTGCTAT+GGG | - | chr8_4:52420805-52420824 | None:intergenic | 40.0% |
| TAAACGGTGATGATCTTGTG+TGG | + | chr8_4:52420962-52420981 | Msa1332470:CDS | 40.0% | |
| AAACGGTGATGATCTTGTGT+GGG | + | chr8_4:52420963-52420982 | Msa1332470:CDS | 40.0% | |
| TTCAAAGCCAAGTGTAGTCA+TGG | - | chr8_4:52420989-52421008 | None:intergenic | 40.0% | |
| AGAATATGCAGAGCCTCTTA+AGG | + | chr8_4:52421008-52421027 | Msa1332470:CDS | 40.0% | |
| GAATATGCAGAGCCTCTTAA+GGG | + | chr8_4:52421009-52421028 | Msa1332470:CDS | 40.0% | |
| TTGTGAAGGTAACCCTTAAG+AGG | - | chr8_4:52421024-52421043 | None:intergenic | 40.0% | |
| AGGGTTACCTTCACAAGTAT+AGG | + | chr8_4:52421028-52421047 | Msa1332470:CDS | 40.0% | |
| GGGTTACCTTCACAAGTATA+GGG | + | chr8_4:52421029-52421048 | Msa1332470:CDS | 40.0% | |
| ! | GTAATCATATGTGTCGGTCT+CGG | - | chr8_4:52421470-52421489 | None:intergenic | 40.0% |
| ! | TTTCAAGTGTAAGTGCAGGT+AGG | - | chr8_4:52421685-52421704 | None:intergenic | 40.0% |
| ! | GTTCTTTCAAGTGTAAGTGC+AGG | - | chr8_4:52421689-52421708 | None:intergenic | 40.0% |
| ATACACCCCTTATGTGACAT+GGG | + | chr8_4:52421876-52421895 | Msa1332470:intron | 40.0% | |
| !!! | GTTTTTTGTAGTGGGTGTGA+TGG | - | chr8_4:52422040-52422059 | None:intergenic | 40.0% |
| ! | TTTTCAGAGAGAGAGAGAGA+GGG | - | chr8_4:52422074-52422093 | None:intergenic | 40.0% |
| ! | TCTAGTGAGAATCTAGAGTG+TGG | - | chr8_4:52422233-52422252 | None:intergenic | 40.0% |
| CACTAGAAATCCATCCAGAA+AGG | + | chr8_4:52422246-52422265 | Msa1332470:CDS | 40.0% | |
| GATTCACTAACCTTTCTGGA+TGG | - | chr8_4:52422259-52422278 | None:intergenic | 40.0% | |
| ATTCTCGGCTACTTAAACTC+AGG | + | chr8_4:52422776-52422795 | Msa1332470:intron | 40.0% | |
| GTTATATGTAGCTCACTTGG+TGG | + | chr8_4:52422943-52422962 | Msa1332470:intron | 40.0% | |
| ! | TCACTTGGTGGTACTATTAG+TGG | + | chr8_4:52422955-52422974 | Msa1332470:intron | 40.0% |
| ! | TGCCTTATTAATCAGCTGCA+TGG | + | chr8_4:52423044-52423063 | Msa1332470:intron | 40.0% |
| ATCTCAACCTATCGGGAATT+AGG | - | chr8_4:52423091-52423110 | None:intergenic | 40.0% | |
| ! | TAATTCCCGATAGGTTGAGA+TGG | + | chr8_4:52423090-52423109 | Msa1332470:intron | 40.0% |
| AACTTCCATCTCAACCTATC+GGG | - | chr8_4:52423098-52423117 | None:intergenic | 40.0% | |
| CAACTTCCATCTCAACCTAT+CGG | - | chr8_4:52423099-52423118 | None:intergenic | 40.0% | |
| TGAGATGGAAGTTGCAGATA+TGG | + | chr8_4:52423105-52423124 | Msa1332470:intron | 40.0% | |
| GAGATGGAAGTTGCAGATAT+GGG | + | chr8_4:52423106-52423125 | Msa1332470:intron | 40.0% | |
| ! | GTGATTGCTAGCGCATTTTA+TGG | + | chr8_4:52423268-52423287 | Msa1332470:intron | 40.0% |
| TTAACTGAACGCTTCAACAG+AGG | - | chr8_4:52423311-52423330 | None:intergenic | 40.0% | |
| ! | TGTTGAAGCGTTCAGTTAAC+CGG | + | chr8_4:52423312-52423331 | Msa1332470:intron | 40.0% |
| ! | TGGAAGTGGGAGTTTTTCTT+GGG | + | chr8_4:52423348-52423367 | Msa1332470:CDS | 40.0% |
| !! | CACTTGTTTTCTGCTATGCT+TGG | + | chr8_4:52423437-52423456 | Msa1332470:intron | 40.0% |
| TAACAAAAATGTTGCAGGGC+AGG | - | chr8_4:52423463-52423482 | None:intergenic | 40.0% | |
| CTGAATGAAACAGCTTCAAC+CGG | - | chr8_4:52423498-52423517 | None:intergenic | 40.0% | |
| CCTTGTGTGTTACCTTTGTT+GGG | + | chr8_4:52423554-52423573 | Msa1332470:intron | 40.0% | |
| AATATAACTCCTCCGTTCTC+TGG | - | chr8_4:52423644-52423663 | None:intergenic | 40.0% | |
| CAAGACAAAAACCTTTGCAG+CGG | - | chr8_4:52423887-52423906 | None:intergenic | 40.0% | |
| TAATGCATCAGGTCACTTGT+TGG | + | chr8_4:52424078-52424097 | Msa1332470:intron | 40.0% | |
| GAGCCTAATTCTCCTTTGAA+CGG | + | chr8_4:52424466-52424485 | Msa1332470:CDS | 40.0% | |
| CTTCCGTTCAAAGGAGAATT+AGG | - | chr8_4:52424472-52424491 | None:intergenic | 40.0% | |
| AATTCTCCTTTGAACGGAAG+AGG | + | chr8_4:52424472-52424491 | Msa1332470:CDS | 40.0% | |
| GAATCAGGTGGTAAAGCTTC+AGG | + | chr8_4:52420748-52420767 | Msa1332470:CDS | 45.0% | |
| !! | TACCAACGTTTGCTATGGGA+AGG | - | chr8_4:52420801-52420820 | None:intergenic | 45.0% |
| TTCCCATAGCAAACGTTGGT+AGG | + | chr8_4:52420800-52420819 | Msa1332470:CDS | 45.0% | |
| ! | GATCCTACCAACGTTTGCTA+TGG | - | chr8_4:52420806-52420825 | None:intergenic | 45.0% |
| TTCGATATCTTTGCTCTCGC+CGG | - | chr8_4:52420844-52420863 | None:intergenic | 45.0% | |
| CAGGAAGTTTGACGGAATCA+TGG | - | chr8_4:52421654-52421673 | None:intergenic | 45.0% | |
| TGGAAGAGTGGTATGGAGAA+GGG | - | chr8_4:52421857-52421876 | None:intergenic | 45.0% | |
| ATGGAAGAGTGGTATGGAGA+AGG | - | chr8_4:52421858-52421877 | None:intergenic | 45.0% | |
| ! | ATAAGGGGTGTATGGAAGAG+TGG | - | chr8_4:52421869-52421888 | None:intergenic | 45.0% |
| ! | CATGTCACATAAGGGGTGTA+TGG | - | chr8_4:52421877-52421896 | None:intergenic | 45.0% |
| CATACACCCCTTATGTGACA+TGG | + | chr8_4:52421875-52421894 | Msa1332470:intron | 45.0% | |
| !!! | TTTTGTAGTGGGTGTGATGG+CGG | - | chr8_4:52422037-52422056 | None:intergenic | 45.0% |
| !!! | GATGGCGGGTTTTTTGTAGT+GGG | - | chr8_4:52422048-52422067 | None:intergenic | 45.0% |
| !!! | TGATGGCGGGTTTTTTGTAG+TGG | - | chr8_4:52422049-52422068 | None:intergenic | 45.0% |
| ! | GTTTTCAGAGAGAGAGAGAG+AGG | - | chr8_4:52422075-52422094 | None:intergenic | 45.0% |
| AGAGGGATAAGGGAGATTGA+GGG | - | chr8_4:52422117-52422136 | None:intergenic | 45.0% | |
| AGATGAGGTTTCGAGAGACA+GGG | - | chr8_4:52422140-52422159 | None:intergenic | 45.0% | |
| CGGTCGCAAATCAAATTCGA+AGG | - | chr8_4:52422373-52422392 | None:intergenic | 45.0% | |
| ATTGAGGGACCCTATATGTG+AGG | + | chr8_4:52422824-52422843 | Msa1332470:intron | 45.0% | |
| TTGAGGGACCCTATATGTGA+GGG | + | chr8_4:52422825-52422844 | Msa1332470:intron | 45.0% | |
| ! | CTGGAAGTGGGAGTTTTTCT+TGG | + | chr8_4:52423347-52423366 | Msa1332470:CDS | 45.0% |
| ! | GATGTGGCTGCAGTTTTTCT+TGG | + | chr8_4:52423394-52423413 | Msa1332470:intron | 45.0% |
| TCATTCAGTTTAGAGAGGGG+AGG | + | chr8_4:52423510-52423529 | Msa1332470:intron | 45.0% | |
| GCCTTGTGTGTTACCTTTGT+TGG | + | chr8_4:52423553-52423572 | Msa1332470:intron | 45.0% | |
| CCCAACAAAGGTAACACACA+AGG | - | chr8_4:52423557-52423576 | None:intergenic | 45.0% | |
| ! | TGAGTGCAGACTGTGTTGTT+TGG | + | chr8_4:52423577-52423596 | Msa1332470:intron | 45.0% |
| CAACTGGAAACACCAGAGAA+CGG | + | chr8_4:52423629-52423648 | Msa1332470:intron | 45.0% | |
| CTTCAGAACATACTTGCCAC+AGG | + | chr8_4:52423858-52423877 | Msa1332470:intron | 45.0% | |
| ! | CGCTGCAAAGGTTTTTGTCT+TGG | + | chr8_4:52423885-52423904 | Msa1332470:CDS | 45.0% |
| ! | TGTCTTGGACTCTTCTAGGA+TGG | + | chr8_4:52423900-52423919 | Msa1332470:CDS | 45.0% |
| AGAGCACGATCAATCTTGTG+TGG | + | chr8_4:52424344-52424363 | Msa1332470:intron | 45.0% | |
| CATGATCCTCTTCCGTTCAA+AGG | - | chr8_4:52424481-52424500 | None:intergenic | 45.0% | |
| AACGGAAGAGGATCATGTGT+TGG | + | chr8_4:52424484-52424503 | Msa1332470:CDS | 45.0% | |
| CTCCTTCCCATAGCAAACGT+TGG | + | chr8_4:52420796-52420815 | Msa1332470:CDS | 50.0% | |
| GGTAGTAGTAAGGAGCAGCA+AGG | + | chr8_4:52421090-52421109 | Msa1332470:CDS | 50.0% | |
| ! | ATCGGTGTCCGCCTTATGTT+CGG | + | chr8_4:52421520-52421539 | Msa1332470:intron | 50.0% |
| AGACACGGACACCGAACATA+AGG | - | chr8_4:52421534-52421553 | None:intergenic | 50.0% | |
| ! | GTGCAGGTAGGTTGAGTATC+AGG | - | chr8_4:52421673-52421692 | None:intergenic | 50.0% |
| GGGTGTATGGAAGAGTGGTA+TGG | - | chr8_4:52421864-52421883 | None:intergenic | 50.0% | |
| TCTCTCTTCTGTCATCCCAG+AGG | + | chr8_4:52421967-52421986 | Msa1332470:intron | 50.0% | |
| AGGGAGATTGAGGGTGATGA+AGG | - | chr8_4:52422108-52422127 | None:intergenic | 50.0% | |
| GAGAGGGATAAGGGAGATTG+AGG | - | chr8_4:52422118-52422137 | None:intergenic | 50.0% | |
| AGAGACAGGGAGAGGGATAA+GGG | - | chr8_4:52422127-52422146 | None:intergenic | 50.0% | |
| GAGATGAGGTTTCGAGAGAC+AGG | - | chr8_4:52422141-52422160 | None:intergenic | 50.0% | |
| TGAGGTTGACGAAGGTGAGA+GGG | - | chr8_4:52422163-52422182 | None:intergenic | 50.0% | |
| TTGAGGTTGACGAAGGTGAG+AGG | - | chr8_4:52422164-52422183 | None:intergenic | 50.0% | |
| AGGGAGATTGAGGTTGACGA+AGG | - | chr8_4:52422171-52422190 | None:intergenic | 50.0% | |
| AGAAACAAAAGTGGCGGCGA+GGG | - | chr8_4:52422190-52422209 | None:intergenic | 50.0% | |
| GGCTACTTAAACTCAGGCTG+TGG | + | chr8_4:52422782-52422801 | Msa1332470:intron | 50.0% | |
| AGATTGCCGATGCAGGATTG+AGG | + | chr8_4:52422808-52422827 | Msa1332470:intron | 50.0% | |
| GATTGCCGATGCAGGATTGA+GGG | + | chr8_4:52422809-52422828 | Msa1332470:intron | 50.0% | |
| CAGGAAAGTCACGAGTCGAT+AGG | - | chr8_4:52423234-52423253 | None:intergenic | 50.0% | |
| ! | GAAGCGTTCAGTTAACCGGT+AGG | + | chr8_4:52423316-52423335 | Msa1332470:intron | 50.0% |
| !! | GTGTTGCTGCCTCAGGTTTT+AGG | + | chr8_4:52423370-52423389 | Msa1332470:CDS | 50.0% |
| !!! | GCCTCAGGTTTTAGGTGATG+TGG | + | chr8_4:52423378-52423397 | Msa1332470:intron | 50.0% |
| GCCACATCACCTAAAACCTG+AGG | - | chr8_4:52423382-52423401 | None:intergenic | 50.0% | |
| ! | GTGGCTGCAGTTTTTCTTGG+TGG | + | chr8_4:52423397-52423416 | Msa1332470:intron | 50.0% |
| ! | GAGGATGTGTTGCTGTCACA+TGG | + | chr8_4:52423529-52423548 | Msa1332470:intron | 50.0% |
| AGTCTGCACTCACCCAACAA+AGG | - | chr8_4:52423569-52423588 | None:intergenic | 50.0% | |
| TCAACAACCGGCTAAGCAAC+TGG | + | chr8_4:52423613-52423632 | Msa1332470:intron | 50.0% | |
| GGTGTTTCCAGTTGCTTAGC+CGG | - | chr8_4:52423623-52423642 | None:intergenic | 50.0% | |
| GTGTGGGCCATGACTACACT+TGG | + | chr8_4:52420979-52420998 | Msa1332470:CDS | 55.0% | |
| CACGGACACCGAACATAAGG+CGG | - | chr8_4:52421531-52421550 | None:intergenic | 55.0% | |
| GTGAAGCACGGGTACAGACA+CGG | - | chr8_4:52421549-52421568 | None:intergenic | 55.0% | |
| ! | AGAGAGAGAGGGTGTGATGG+CGG | - | chr8_4:52422063-52422082 | None:intergenic | 55.0% |
| ! | GAGAGAGAGAGAGGGTGTGA+TGG | - | chr8_4:52422066-52422085 | None:intergenic | 55.0% |
| GGGTGATGAAGGCGAGATTG+AGG | - | chr8_4:52422097-52422116 | None:intergenic | 55.0% | |
| GAGAGACAGGGAGAGGGATA+AGG | - | chr8_4:52422128-52422147 | None:intergenic | 55.0% | |
| GGTTTCGAGAGACAGGGAGA+GGG | - | chr8_4:52422134-52422153 | None:intergenic | 55.0% | |
| AGGTTTCGAGAGACAGGGAG+AGG | - | chr8_4:52422135-52422154 | None:intergenic | 55.0% | |
| ACGAAGGTGAGAGGGAGATG+AGG | - | chr8_4:52422155-52422174 | None:intergenic | 55.0% | |
| GAGAAACAAAAGTGGCGGCG+AGG | - | chr8_4:52422191-52422210 | None:intergenic | 55.0% | |
| GTGGAAGAGATTGCCGATGC+AGG | + | chr8_4:52422801-52422820 | Msa1332470:intron | 55.0% | |
| AGGGTCCCTCAATCCTGCAT+CGG | - | chr8_4:52422817-52422836 | None:intergenic | 55.0% | |
| TTGGGCGCCTAATTCCCGAT+AGG | + | chr8_4:52423081-52423100 | Msa1332470:intron | 55.0% | |
| TAGGTCGCGTGACTGGAAGT+GGG | + | chr8_4:52423335-52423354 | Msa1332470:CDS | 55.0% | |
| !! | TTCTTGGGTGTTGCTGCCTC+AGG | + | chr8_4:52423363-52423382 | Msa1332470:CDS | 55.0% |
| CTGGAAACACCAGAGAACGG+AGG | + | chr8_4:52423632-52423651 | Msa1332470:intron | 55.0% | |
| ACCTTTGCAGCGGAAACCTG+TGG | - | chr8_4:52423877-52423896 | None:intergenic | 55.0% | |
| !! | TGGTGTTGATGGCGGAGGCT+TGG | - | chr8_4:52421997-52422016 | None:intergenic | 60.0% |
| !! | GGTGGCGTTGGTGTTGATGG+CGG | - | chr8_4:52422005-52422024 | None:intergenic | 60.0% |
| !! | TGTAGTGGGTGTGATGGCGG+AGG | - | chr8_4:52422034-52422053 | None:intergenic | 60.0% |
| ! | GAGAGAGAGGGTGTGATGGC+GGG | - | chr8_4:52422062-52422081 | None:intergenic | 60.0% |
| TAACCGGTAGGTCGCGTGAC+TGG | + | chr8_4:52423328-52423347 | Msa1332470:CDS | 60.0% | |
| CTTCCAGTCACGCGACCTAC+CGG | - | chr8_4:52423334-52423353 | None:intergenic | 60.0% | |
| GTAGGTCGCGTGACTGGAAG+TGG | + | chr8_4:52423334-52423353 | Msa1332470:CDS | 60.0% | |
| GCCACAGGTTTCCGCTGCAA+AGG | + | chr8_4:52423873-52423892 | Msa1332470:CDS | 60.0% | |
| ! | CGGAGGCTTGGTCTGCCTCT+GGG | - | chr8_4:52421985-52422004 | None:intergenic | 65.0% |
| !! | GGCGTTGGTGTTGATGGCGG+AGG | - | chr8_4:52422002-52422021 | None:intergenic | 65.0% |
| !! | GGCGGTGGCGTTGGTGTTGA+TGG | - | chr8_4:52422008-52422027 | None:intergenic | 65.0% |
| AGTGGCGGCGAGGGAGATTG+AGG | - | chr8_4:52422181-52422200 | None:intergenic | 65.0% | |
| ! | GCGGAGGCTTGGTCTGCCTC+TGG | - | chr8_4:52421986-52422005 | None:intergenic | 70.0% |
| !! | TGGGTGTGATGGCGGAGGCG+CGG | - | chr8_4:52422029-52422048 | None:intergenic | 70.0% |
| !! | GTGTGATGGCGGAGGCGCGG+CGG | - | chr8_4:52422026-52422045 | None:intergenic | 75.0% |
| !!! | TGATGGCGGAGGCGCGGCGG+TGG | - | chr8_4:52422023-52422042 | None:intergenic | 80.0% |
| !! | CGGAGGCGCGGCGGTGGCGT+TGG | - | chr8_4:52422017-52422036 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 52420730 | 52424519 | 52420730 | ID=Msa1332470;Name=Msa1332470 |
| chr8_4 | mRNA | 52420730 | 52424519 | 52420730 | ID=Msa1332470-mRNA-1;Parent=Msa1332470;Name=Msa1332470-mRNA-1;_AED=0.34;_eAED=0.40;_QI=0|0|0|0.8|1|1|5|0|333 |
| chr8_4 | exon | 52420730 | 52421137 | 52420730 | ID=Msa1332470-mRNA-1:exon:15727;Parent=Msa1332470-mRNA-1 |
| chr8_4 | exon | 52421987 | 52422267 | 52421987 | ID=Msa1332470-mRNA-1:exon:15728;Parent=Msa1332470-mRNA-1 |
| chr8_4 | exon | 52423320 | 52423391 | 52423320 | ID=Msa1332470-mRNA-1:exon:15729;Parent=Msa1332470-mRNA-1 |
| chr8_4 | exon | 52423864 | 52424032 | 52423864 | ID=Msa1332470-mRNA-1:exon:15730;Parent=Msa1332470-mRNA-1 |
| chr8_4 | exon | 52424448 | 52424519 | 52424448 | ID=Msa1332470-mRNA-1:exon:15731;Parent=Msa1332470-mRNA-1 |
| chr8_4 | CDS | 52420730 | 52421137 | 52420730 | ID=Msa1332470-mRNA-1:cds;Parent=Msa1332470-mRNA-1 |
| chr8_4 | CDS | 52421987 | 52422267 | 52421987 | ID=Msa1332470-mRNA-1:cds;Parent=Msa1332470-mRNA-1 |
| chr8_4 | CDS | 52423320 | 52423391 | 52423320 | ID=Msa1332470-mRNA-1:cds;Parent=Msa1332470-mRNA-1 |
| chr8_4 | CDS | 52423864 | 52424032 | 52423864 | ID=Msa1332470-mRNA-1:cds;Parent=Msa1332470-mRNA-1 |
| chr8_4 | CDS | 52424448 | 52424519 | 52424448 | ID=Msa1332470-mRNA-1:cds;Parent=Msa1332470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
