AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1335550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335550 MtrunA17_Chr5g0401671 95.126 595 29 0 1 595 1 595 0.0 1128
Msa1335550 MtrunA17_Chr5g0401661 87.267 589 58 4 9 595 112 685 0.0 997
Msa1335550 MtrunA17_Chr4g0053651 72.697 597 142 4 1 595 1 578 0.0 897
Msa1335550 MtrunA17_Chr4g0067151 27.003 337 222 10 220 551 5 322 2.72e-30 121
Msa1335550 MtrunA17_Chr4g0067151 25.738 237 156 4 339 564 19 246 1.54e-20 93.2
Msa1335550 MtrunA17_Chr4g0067151 25.106 235 147 5 238 462 111 326 1.50e-17 84.3
Msa1335550 MtrunA17_Chr4g0067151 26.190 168 105 3 424 581 21 179 1.36e-14 75.1
Msa1335550 MtrunA17_Chr1g0176241 26.893 383 189 8 243 550 115 481 3.69e-29 121
Msa1335550 MtrunA17_Chr1g0176241 33.537 164 102 5 403 565 134 291 2.56e-17 85.1
Msa1335550 MtrunA17_Chr3g0136971 25.610 328 200 8 241 565 344 630 8.43e-28 118
Msa1335550 MtrunA17_Chr3g0136971 26.154 260 173 4 237 494 409 651 9.52e-19 90.1
Msa1335550 MtrunA17_Chr3g0136971 23.308 266 156 6 362 592 363 615 6.54e-18 87.8
Msa1335550 MtrunA17_Chr3g0136971 25.126 199 111 3 425 594 344 533 2.01e-12 70.1
Msa1335550 MtrunA17_Chr1g0200901 27.532 316 159 9 240 552 73 321 2.87e-27 114
Msa1335550 MtrunA17_Chr1g0200901 22.764 246 133 6 320 560 95 288 4.55e-12 68.2
Msa1335550 MtrunA17_Chr1g0200901 25.571 219 146 5 243 460 202 404 1.80e-11 66.2
Msa1335550 MtrunA17_Chr8g0352821 27.928 333 219 9 266 588 140 461 8.20e-27 115
Msa1335550 MtrunA17_Chr1g0172501 29.310 232 155 2 321 551 330 553 5.50e-26 112
Msa1335550 MtrunA17_Chr1g0172501 24.783 230 145 4 349 568 274 485 1.38e-17 86.3
Msa1335550 MtrunA17_Chr1g0172501 25.114 219 144 3 243 458 352 553 3.19e-15 79.0
Msa1335550 MtrunA17_Chr1g0172501 28.161 174 113 4 423 594 307 470 1.51e-11 67.0
Msa1335550 MtrunA17_Chr6g0448921 29.537 281 168 9 320 590 31 291 7.37e-26 112
Msa1335550 MtrunA17_Chr6g0448921 24.194 186 130 2 383 566 10 186 1.59e-18 89.7
Msa1335550 MtrunA17_Chr6g0448921 28.324 173 113 3 423 593 9 172 1.34e-17 86.7
Msa1335550 MtrunA17_Chr3g0093681 29.310 232 155 2 321 551 330 553 1.31e-25 111
Msa1335550 MtrunA17_Chr3g0093681 24.783 230 145 4 349 568 274 485 1.11e-17 86.7
Msa1335550 MtrunA17_Chr3g0093681 25.114 219 144 3 243 458 352 553 5.94e-15 78.2
Msa1335550 MtrunA17_Chr3g0093681 28.161 174 113 4 423 594 307 470 1.43e-11 67.4
Msa1335550 MtrunA17_Chr2g0281451 29.487 234 153 4 320 551 30 253 2.22e-23 105
Msa1335550 MtrunA17_Chr2g0281451 24.731 186 129 2 383 566 9 185 3.35e-17 85.9
Msa1335550 MtrunA17_Chr2g0281451 28.324 173 113 4 423 593 8 171 2.17e-15 80.1
Msa1335550 MtrunA17_Chr1g0185501 26.899 316 197 10 243 550 23 312 5.66e-23 100
Msa1335550 MtrunA17_Chr1g0185501 24.286 280 171 7 342 581 22 300 7.98e-22 96.7
Msa1335550 MtrunA17_Chr1g0185501 26.754 228 138 7 240 457 104 312 2.72e-15 77.4
Msa1335550 MtrunA17_Chr7g0253861 26.336 262 171 7 343 592 51 302 1.09e-22 99.8
Msa1335550 MtrunA17_Chr7g0253861 27.692 325 196 11 237 549 45 342 4.51e-22 97.8
Msa1335550 MtrunA17_Chr7g0253861 30.114 176 112 3 421 594 46 212 1.86e-14 75.1
Msa1335550 MtrunA17_Chr5g0405851 24.444 315 214 5 245 551 152 450 9.65e-22 98.6
Msa1335550 MtrunA17_Chr5g0405851 26.577 222 138 4 355 560 162 374 2.82e-17 84.7
Msa1335550 MtrunA17_Chr5g0405851 29.448 163 102 5 442 594 166 325 2.34e-14 75.9
Msa1335550 MtrunA17_Chr5g0405851 25.112 223 139 5 243 458 249 450 3.28e-13 72.0
Msa1335550 MtrunA17_Chr1g0171711 28.205 234 152 7 341 571 503 723 2.36e-21 98.6
Msa1335550 MtrunA17_Chr1g0171711 25.000 328 195 10 235 550 497 785 9.21e-17 84.3
Msa1335550 MtrunA17_Chr1g0171711 25.000 260 176 8 304 558 507 752 2.97e-15 79.3
Msa1335550 MtrunA17_Chr7g0266251 27.647 340 157 14 239 549 8 287 8.09e-20 91.3
Msa1335550 MtrunA17_Chr7g0266251 25.660 265 126 9 309 550 19 235 8.86e-18 85.1
Msa1335550 MtrunA17_Chr7g0266251 26.482 253 137 9 240 459 106 342 4.87e-13 70.9
Msa1335550 MtrunA17_Chr7g0266251 26.776 183 108 7 423 588 9 182 2.90e-12 68.6
Msa1335550 MtrunA17_Chr7g0246741 25.733 307 158 7 308 592 371 629 8.89e-20 94.0
Msa1335550 MtrunA17_Chr7g0246741 25.628 199 94 4 428 581 367 556 2.25e-14 76.6
Msa1335550 MtrunA17_Chr8g0392701 30.909 220 137 6 360 571 29 241 6.68e-19 88.2
Msa1335550 MtrunA17_Chr8g0392701 26.295 251 163 8 320 559 30 269 9.26e-16 79.0
Msa1335550 MtrunA17_Chr3g0144511 24.518 363 215 14 223 552 35 371 2.51e-18 87.4
Msa1335550 MtrunA17_Chr3g0144511 22.727 242 152 9 342 562 60 287 1.85e-14 75.5
Msa1335550 MtrunA17_Chr3g0095501 24.355 349 213 11 234 564 257 572 8.99e-18 87.0
Msa1335550 MtrunA17_Chr4g0070791 26.688 311 187 10 220 509 29 319 3.18e-17 83.2
Msa1335550 MtrunA17_Chr4g0070791 22.404 366 218 12 241 593 8 320 3.42e-16 80.1
Msa1335550 MtrunA17_Chr3g0103361 26.471 306 193 9 245 545 17 295 4.66e-17 82.4
Msa1335550 MtrunA17_Chr3g0103361 27.841 176 110 4 424 593 13 177 2.49e-14 74.3
Msa1335550 MtrunA17_Chr3g0103361 24.113 282 155 9 307 581 20 249 1.08e-12 69.3
Msa1335550 MtrunA17_Chr3g0138311 25.614 285 157 10 309 550 624 896 1.16e-16 84.0
Msa1335550 MtrunA17_Chr3g0138311 26.872 227 145 8 350 571 624 834 2.42e-14 76.6
Msa1335550 MtrunA17_Chr2g0295791 24.651 215 150 3 332 544 155 359 1.20e-16 82.8
Msa1335550 MtrunA17_Chr2g0295791 27.160 162 109 1 399 560 181 333 5.96e-15 77.8
Msa1335550 MtrunA17_Chr2g0295791 21.239 339 230 7 236 564 159 470 3.19e-12 68.9
Msa1335550 MtrunA17_Chr7g0267961 23.711 291 173 7 309 552 142 430 1.74e-16 82.4
Msa1335550 MtrunA17_Chr2g0283891 29.121 182 114 7 420 595 97 269 3.16e-16 80.1
Msa1335550 MtrunA17_Chr2g0284241 24.611 321 196 10 261 564 22 313 4.09e-16 80.1
Msa1335550 MtrunA17_Chr7g0233651 22.772 303 135 7 301 552 160 414 9.09e-16 80.1
Msa1335550 MtrunA17_Chr4g0026671 22.817 355 204 8 309 593 16 370 1.08e-15 80.9
Msa1335550 MtrunA17_Chr2g0307941 21.552 348 197 8 244 581 15 296 1.84e-15 80.1
Msa1335550 MtrunA17_Chr2g0307941 23.693 287 178 8 235 509 50 307 1.01e-13 74.7
Msa1335550 MtrunA17_Chr2g0307941 26.000 200 130 3 401 592 34 223 5.32e-12 68.9
Msa1335550 MtrunA17_Chr5g0442391 25.602 332 202 10 235 553 252 551 1.90e-15 79.7
Msa1335550 MtrunA17_Chr5g0442391 27.586 174 112 4 423 592 257 420 5.59e-12 68.6
Msa1335550 MtrunA17_Chr4g0069701 28.992 238 137 6 320 554 78 286 1.97e-15 80.1
Msa1335550 MtrunA17_Chr4g0069701 23.529 323 201 9 243 550 402 693 5.78e-13 72.0
Msa1335550 MtrunA17_Chr4g0069701 28.058 139 87 3 425 559 101 230 3.77e-11 66.2
Msa1335550 MtrunA17_Chr7g0228191 22.642 265 158 4 334 552 56 319 2.15e-15 77.8
Msa1335550 MtrunA17_Chr4g0059031 28.962 183 118 3 405 581 77 253 2.97e-15 79.3
Msa1335550 MtrunA17_Chr4g0059031 25.610 246 157 7 320 550 419 653 1.21e-14 77.4
Msa1335550 MtrunA17_Chr4g0059031 22.628 274 186 7 306 562 359 623 4.54e-13 72.4
Msa1335550 MtrunA17_Chr4g0059031 21.739 299 180 9 229 508 390 653 5.57e-11 65.9
Msa1335550 MtrunA17_Chr4g0057141 23.029 482 282 15 127 582 217 635 3.77e-15 79.0
Msa1335550 MtrunA17_Chr2g0321211 22.507 351 206 8 309 593 16 366 3.88e-15 79.3
Msa1335550 MtrunA17_Chr2g0282401 26.778 239 152 9 343 576 508 728 5.06e-15 78.6
Msa1335550 MtrunA17_Chr2g0282401 22.961 331 215 10 226 550 491 787 3.34e-11 66.2
Msa1335550 MtrunA17_Chr7g0235181 25.475 263 172 10 304 552 152 404 7.97e-15 77.0
Msa1335550 MtrunA17_Chr5g0395821 23.288 292 163 8 312 550 143 426 1.68e-14 76.3
Msa1335550 MtrunA17_Chr1g0185891 23.029 482 280 16 129 582 156 574 2.11e-14 76.3
Msa1335550 MtrunA17_Chr5g0438901 22.188 329 218 11 290 591 356 673 2.14e-14 76.6
Msa1335550 MtrunA17_Chr3g0111961 23.630 292 158 9 312 552 185 462 3.28e-14 75.5
Msa1335550 MtrunA17_Chr2g0308501 27.556 225 144 8 305 520 16 230 3.44e-14 74.3
Msa1335550 MtrunA17_Chr4g0004241 22.780 259 181 6 338 588 6 253 5.22e-14 75.5
Msa1335550 MtrunA17_Chr4g0004241 21.477 298 222 5 298 590 7 297 5.51e-13 72.4
Msa1335550 MtrunA17_Chr1g0148791 25.778 225 144 8 355 571 630 839 6.49e-14 75.1
Msa1335550 MtrunA17_Chr1g0148791 21.450 331 206 11 235 550 610 901 6.73e-13 72.0
Msa1335550 MtrunA17_Chr1g0148791 22.785 316 221 9 261 567 576 877 8.28e-13 71.6
Msa1335550 MtrunA17_Chr1g0148791 29.448 163 102 4 432 592 624 775 3.05e-12 69.7
Msa1335550 MtrunA17_Chr2g0331961 27.753 227 149 5 346 567 100 316 9.93e-14 72.4
Msa1335550 MtrunA17_Chr2g0331981 22.780 259 181 6 338 588 6 253 1.40e-13 73.9
Msa1335550 MtrunA17_Chr2g0331981 21.141 298 223 5 298 590 7 297 1.09e-12 71.2
Msa1335550 MtrunA17_Chr3g0098921 23.693 287 169 9 312 550 147 431 1.93e-13 72.8
Msa1335550 MtrunA17_Chr4g0036951 24.060 266 140 9 343 589 158 380 3.09e-13 72.0
Msa1335550 MtrunA17_Chr3g0099061 27.419 248 146 9 354 584 221 451 3.36e-13 72.4
Msa1335550 MtrunA17_Chr3g0099061 25.444 169 123 3 428 594 212 379 4.33e-13 72.0
Msa1335550 MtrunA17_Chr3g0099061 20.743 323 224 8 241 550 208 511 7.13e-12 68.2
Msa1335550 MtrunA17_Chr4g0058091 24.172 302 166 7 340 590 223 512 3.71e-13 72.0
Msa1335550 MtrunA17_Chr8g0383711 22.768 224 161 3 342 564 13 225 4.26e-13 70.5
Msa1335550 MtrunA17_Chr8g0383711 19.062 320 229 7 234 550 5 297 2.23e-12 68.2
Msa1335550 MtrunA17_Chr2g0322171 25.483 259 149 7 307 561 11 229 5.66e-13 70.5
Msa1335550 MtrunA17_Chr1g0168391 23.622 254 145 5 309 561 227 432 6.78e-13 71.2
Msa1335550 MtrunA17_Chr1g0168391 21.673 263 189 6 297 550 257 511 6.53e-12 68.2
Msa1335550 MtrunA17_Chr2g0292301 25.862 232 163 5 243 469 145 372 7.17e-13 71.2
Msa1335550 MtrunA17_Chr7g0237241 23.841 302 207 10 260 556 456 739 1.17e-12 70.9
Msa1335550 MtrunA17_Chr8g0390861 22.407 241 171 3 320 557 883 1110 1.43e-12 70.9
Msa1335550 MtrunA17_Chr8g0388841 26.180 233 138 8 346 576 266 466 1.51e-12 70.5
Msa1335550 MtrunA17_Chr7g0234591 24.719 267 176 11 301 552 157 413 1.85e-12 69.7
Msa1335550 MtrunA17_Chr7g0234591 23.874 222 151 5 309 520 123 336 4.32e-12 68.6
Msa1335550 MtrunA17_Chr1g0146771 26.809 235 139 8 343 576 255 457 3.93e-12 69.3
Msa1335550 MtrunA17_Chr1g0183051 24.444 315 192 10 234 512 203 507 4.96e-12 68.6
Msa1335550 MtrunA17_Chr2g0294611 20.885 407 217 15 239 561 236 621 8.68e-12 68.6
Msa1335550 MtrunA17_Chr4g0047051 25.191 262 163 12 301 550 67 307 1.47e-11 65.9
Msa1335550 MtrunA17_Chr3g0116561 23.022 278 196 6 321 590 240 507 1.76e-11 67.0
Msa1335550 MtrunA17_Chr1g0194721 35.878 131 72 4 423 550 235 356 2.22e-11 67.4
Msa1335550 MtrunA17_Chr7g0237271 24.314 255 170 9 309 556 510 748 2.55e-11 66.6
Msa1335550 MtrunA17_Chr7g0237271 22.364 313 192 11 250 550 510 783 7.44e-11 65.1
Msa1335550 MtrunA17_Chr8g0384161 23.481 362 202 12 246 544 11 360 2.76e-11 66.2
Msa1335550 MtrunA17_Chr1g0172761 50.000 56 28 0 495 550 17 72 3.03e-11 59.7
Msa1335550 MtrunA17_Chr2g0308391 20.870 345 202 12 235 564 114 402 3.47e-11 65.5
Msa1335550 MtrunA17_Chr4g0062881 26.012 173 115 4 421 592 171 331 3.66e-11 65.9
Msa1335550 MtrunA17_Chr8g0392731 23.237 241 162 8 341 567 53 284 4.13e-11 65.9
Msa1335550 MtrunA17_Chr1g0191191 22.222 288 192 8 313 581 85 359 4.53e-11 65.9
Msa1335550 MtrunA17_Chr4g0057131 20.833 240 153 2 350 552 212 451 5.79e-11 65.1
Msa1335550 MtrunA17_Chr3g0132771 21.723 267 165 7 310 568 2981 3211 6.29e-11 65.9
Msa1335550 MtrunA17_Chr1g0197551 22.957 257 151 8 309 552 96 318 9.41e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1335550 AT5G67320.1 63.192 614 206 5 1 595 1 613 0.0 767
Msa1335550 AT3G49660.1 27.885 312 204 9 243 551 20 313 1.29e-29 119
Msa1335550 AT3G49660.1 24.348 230 158 4 342 564 19 239 6.79e-20 91.3
Msa1335550 AT3G49660.1 23.875 289 197 9 289 564 6 284 7.38e-20 91.3
Msa1335550 AT3G49660.1 25.322 233 147 5 238 462 104 317 1.10e-19 90.9
Msa1335550 AT3G49660.1 29.268 164 101 3 424 581 18 172 1.04e-15 79.0
Msa1335550 AT2G41500.1 23.185 427 287 9 141 551 135 536 5.77e-27 115
Msa1335550 AT2G41500.1 26.699 206 139 4 349 552 257 452 1.40e-16 83.6
Msa1335550 AT2G41500.1 27.528 178 116 4 420 595 288 454 1.13e-13 74.3
Msa1335550 AT2G41500.2 23.185 427 287 9 141 551 135 536 5.77e-27 115
Msa1335550 AT2G41500.2 26.699 206 139 4 349 552 257 452 1.40e-16 83.6
Msa1335550 AT2G41500.2 27.528 178 116 4 420 595 288 454 1.13e-13 74.3
Msa1335550 AT5G52820.1 25.199 377 224 9 243 581 105 461 1.11e-25 110
Msa1335550 AT5G52820.1 29.781 319 176 13 243 550 190 471 1.59e-25 110
Msa1335550 AT5G52820.1 22.727 330 177 9 342 594 104 432 1.69e-14 76.6
Msa1335550 AT5G25150.1 25.000 276 171 5 317 565 363 629 1.94e-25 111
Msa1335550 AT5G25150.1 25.455 275 137 6 237 510 408 615 4.39e-17 85.5
Msa1335550 AT5G25150.1 28.342 187 116 4 425 594 347 532 6.03e-13 72.4
Msa1335550 AT5G25150.2 25.000 276 171 5 317 565 363 629 2.49e-25 111
Msa1335550 AT5G25150.2 25.455 275 137 6 237 510 408 615 5.25e-17 85.1
Msa1335550 AT5G25150.2 28.342 187 116 4 425 594 347 532 7.52e-13 72.0
Msa1335550 AT2G26060.2 28.274 336 153 10 243 549 16 292 5.15e-25 107
Msa1335550 AT2G26060.2 25.385 260 129 7 315 557 36 247 1.36e-15 79.0
Msa1335550 AT2G26060.1 28.274 336 153 10 243 549 16 292 7.82e-25 106
Msa1335550 AT2G26060.1 25.385 260 129 7 315 557 36 247 2.13e-15 78.6
Msa1335550 AT2G26060.1 26.190 252 140 9 240 459 111 348 2.26e-14 75.5
Msa1335550 AT2G32700.7 27.052 329 201 12 227 550 511 805 2.35e-24 108
Msa1335550 AT2G32700.2 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa1335550 AT2G32700.5 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa1335550 AT2G32700.1 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa1335550 AT2G32700.4 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa1335550 AT2G32700.3 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa1335550 AT2G32700.6 27.052 329 201 12 227 550 490 784 3.46e-24 108
Msa1335550 AT2G43770.1 27.481 262 168 7 343 592 49 300 9.34e-24 103
Msa1335550 AT2G43770.1 26.593 361 216 14 211 549 7 340 8.64e-22 97.4
Msa1335550 AT2G43770.1 30.857 175 110 3 422 594 45 210 3.09e-14 74.7
Msa1335550 AT5G13480.3 25.526 333 227 9 266 588 68 389 1.73e-23 105
Msa1335550 AT5G13480.3 27.347 245 149 5 242 457 148 392 1.20e-18 90.1
Msa1335550 AT5G13480.3 24.460 278 197 4 291 564 52 320 2.38e-18 89.4
Msa1335550 AT5G13480.2 25.526 333 227 9 266 588 91 412 2.16e-23 105
Msa1335550 AT5G13480.2 27.347 245 149 5 242 457 171 415 9.89e-19 90.5
Msa1335550 AT5G13480.2 24.188 277 197 4 291 564 77 343 4.63e-17 85.5
Msa1335550 AT5G13480.4 25.526 333 227 9 266 588 68 389 2.48e-23 105
Msa1335550 AT5G13480.4 27.347 245 149 5 242 457 148 392 1.49e-18 90.1
Msa1335550 AT5G13480.4 24.460 278 197 4 291 564 52 320 3.36e-18 89.0
Msa1335550 AT5G13480.1 25.526 333 227 9 266 588 80 401 3.03e-23 104
Msa1335550 AT5G13480.1 27.347 245 149 5 242 457 160 404 1.78e-18 89.7
Msa1335550 AT5G13480.1 24.460 278 197 4 291 564 64 332 3.99e-18 88.6
Msa1335550 AT4G02730.1 25.455 330 217 9 227 550 23 329 4.35e-23 101
Msa1335550 AT4G02730.1 26.354 277 162 8 328 564 25 299 4.63e-21 95.1
Msa1335550 AT4G02730.1 31.677 161 99 3 423 581 36 187 1.06e-17 85.1
Msa1335550 AT4G02730.1 23.228 254 157 8 226 462 100 332 3.18e-11 65.5
Msa1335550 AT1G11160.2 29.386 228 148 4 320 544 30 247 9.29e-23 103
Msa1335550 AT1G11160.2 25.738 237 164 4 346 579 14 241 6.80e-21 97.8
Msa1335550 AT1G11160.2 24.731 186 129 2 383 566 9 185 1.67e-16 84.0
Msa1335550 AT1G11160.2 30.636 173 109 4 423 593 8 171 2.94e-16 83.2
Msa1335550 AT1G11160.1 29.386 228 148 4 320 544 30 247 1.02e-22 103
Msa1335550 AT1G11160.1 25.738 237 164 4 346 579 14 241 7.63e-21 97.8
Msa1335550 AT1G11160.1 24.731 186 129 2 383 566 9 185 1.86e-16 84.0
Msa1335550 AT1G11160.1 30.636 173 109 4 423 593 8 171 3.15e-16 83.2
Msa1335550 AT1G11160.4 29.386 228 148 4 320 544 30 247 1.08e-22 103
Msa1335550 AT1G11160.4 25.738 237 164 4 346 579 14 241 8.15e-21 97.8
Msa1335550 AT1G11160.4 24.731 186 129 2 383 566 9 185 1.86e-16 84.0
Msa1335550 AT1G11160.4 30.636 173 109 4 423 593 8 171 3.62e-16 82.8
Msa1335550 AT5G23430.3 27.143 280 176 9 320 590 31 291 3.50e-21 98.6
Msa1335550 AT5G23430.3 24.194 186 130 2 383 566 10 186 4.19e-18 89.0
Msa1335550 AT5G23430.3 27.168 173 115 3 423 593 9 172 1.14e-16 84.3
Msa1335550 AT5G23430.2 27.143 280 176 9 320 590 31 291 3.50e-21 98.6
Msa1335550 AT5G23430.2 24.194 186 130 2 383 566 10 186 4.19e-18 89.0
Msa1335550 AT5G23430.2 27.168 173 115 3 423 593 9 172 1.14e-16 84.3
Msa1335550 AT5G23430.1 27.143 280 176 9 320 590 31 291 3.66e-21 98.6
Msa1335550 AT5G23430.1 24.194 186 130 2 383 566 10 186 4.31e-18 89.0
Msa1335550 AT5G23430.1 27.168 173 115 3 423 593 9 172 1.21e-16 84.3
Msa1335550 AT5G08390.1 27.143 280 176 9 320 590 31 291 4.18e-21 98.6
Msa1335550 AT5G08390.1 24.194 186 130 2 383 566 10 186 1.74e-18 90.1
Msa1335550 AT5G08390.1 30.058 173 110 4 423 593 9 172 2.64e-16 83.2
Msa1335550 AT1G11160.3 28.922 204 135 2 342 544 11 205 4.88e-21 98.6
Msa1335550 AT1G11160.3 25.874 143 97 1 424 566 10 143 7.82e-14 75.5
Msa1335550 AT1G11160.3 35.088 114 72 2 481 593 17 129 2.26e-12 70.9
Msa1335550 AT1G71840.1 24.576 354 205 8 240 550 63 397 1.07e-20 95.1
Msa1335550 AT1G61210.3 28.511 235 154 5 320 551 30 253 1.87e-20 96.7
Msa1335550 AT1G61210.3 26.496 234 160 4 346 576 14 238 1.75e-19 93.6
Msa1335550 AT1G61210.3 25.269 186 128 2 383 566 9 185 2.55e-17 86.7
Msa1335550 AT1G61210.3 28.902 173 112 4 423 593 8 171 1.62e-16 84.0
Msa1335550 AT1G61210.2 28.511 235 154 5 320 551 30 253 3.29e-20 95.9
Msa1335550 AT1G61210.2 26.496 234 160 4 346 576 14 238 2.96e-19 92.8
Msa1335550 AT1G61210.2 25.269 186 128 2 383 566 9 185 5.08e-17 85.9
Msa1335550 AT1G61210.2 28.902 173 112 4 423 593 8 171 1.94e-16 84.0
Msa1335550 AT1G61210.1 28.511 235 154 5 320 551 30 253 3.53e-20 95.9
Msa1335550 AT1G61210.1 26.496 234 160 4 346 576 14 238 3.01e-19 92.8
Msa1335550 AT1G61210.1 25.269 186 128 2 383 566 9 185 5.00e-17 85.9
Msa1335550 AT1G61210.1 28.902 173 112 4 423 593 8 171 1.86e-16 84.0
Msa1335550 AT5G56130.1 27.402 281 186 7 307 580 21 290 7.37e-20 91.3
Msa1335550 AT5G56130.1 23.795 332 209 11 244 570 17 309 1.28e-14 75.5
Msa1335550 AT5G56130.1 25.862 174 116 3 424 593 14 178 2.17e-12 68.9
Msa1335550 AT4G34460.4 24.251 334 205 10 243 552 56 365 1.18e-19 91.7
Msa1335550 AT4G34460.4 22.963 270 180 10 342 591 55 316 4.28e-16 80.9
Msa1335550 AT4G34460.1 24.167 360 219 12 223 552 35 370 1.49e-19 91.3
Msa1335550 AT4G34460.1 22.963 270 180 10 342 591 60 321 5.11e-16 80.5
Msa1335550 AT4G32990.1 27.809 356 172 15 239 552 12 324 1.14e-18 87.8
Msa1335550 AT4G32990.1 24.746 295 133 12 320 588 35 266 1.72e-13 72.4
Msa1335550 AT4G34460.2 25.373 268 169 8 309 552 48 308 1.00e-17 85.1
Msa1335550 AT4G34460.2 22.137 262 176 10 350 591 6 259 2.48e-13 71.6
Msa1335550 AT4G32990.2 24.471 331 148 12 243 549 16 268 2.23e-17 83.2
Msa1335550 AT4G32990.2 24.735 283 125 11 320 576 35 255 1.95e-13 71.6
Msa1335550 AT1G48630.1 28.512 242 157 7 339 571 7 241 3.99e-17 83.2
Msa1335550 AT1G48630.1 26.295 251 163 8 320 559 30 269 8.08e-16 79.3
Msa1335550 AT1G15440.1 22.302 278 183 5 308 561 391 659 8.10e-17 85.1
Msa1335550 AT4G32551.1 25.448 279 146 10 298 571 647 868 9.49e-17 84.7
Msa1335550 AT4G32551.1 21.981 323 214 11 235 550 639 930 2.13e-14 77.0
Msa1335550 AT4G32551.1 29.651 172 108 4 423 592 644 804 2.33e-13 73.9
Msa1335550 AT4G32551.2 25.448 279 146 10 298 571 685 906 1.01e-16 84.7
Msa1335550 AT4G32551.2 21.981 323 214 11 235 550 677 968 2.01e-14 77.4
Msa1335550 AT4G32551.2 29.651 172 108 4 423 592 682 842 2.72e-13 73.6
Msa1335550 AT1G15440.2 22.302 278 183 5 308 561 351 619 1.04e-16 84.7
Msa1335550 AT3G18140.1 24.074 324 204 9 261 571 7 301 1.07e-16 81.6
Msa1335550 AT3G18130.1 29.545 220 140 6 360 571 29 241 1.14e-16 82.0
Msa1335550 AT3G18130.1 25.100 251 166 8 320 559 30 269 2.53e-15 77.8
Msa1335550 AT2G22040.1 24.383 324 191 11 261 564 12 301 4.46e-16 80.1
Msa1335550 AT1G18080.1 28.163 245 159 8 339 573 7 244 6.20e-16 79.7
Msa1335550 AT1G18080.1 27.119 236 145 8 335 559 51 270 8.44e-15 76.3
Msa1335550 AT4G34460.3 22.963 270 180 10 342 591 60 321 6.73e-16 80.1
Msa1335550 AT4G34460.3 23.549 293 180 9 243 515 61 329 3.18e-12 68.6
Msa1335550 AT3G44530.2 23.714 350 201 10 309 593 16 364 1.07e-15 81.3
Msa1335550 AT4G15900.1 20.779 308 182 5 333 588 162 459 1.10e-15 80.5
Msa1335550 AT3G16650.1 23.429 350 226 9 215 557 56 370 1.27e-15 80.1
Msa1335550 AT5G16750.1 24.291 247 161 7 319 550 417 652 1.42e-15 80.9
Msa1335550 AT5G16750.1 22.993 274 152 6 237 508 436 652 8.57e-12 68.9
Msa1335550 AT3G44530.1 23.714 350 201 10 309 593 16 364 1.44e-15 80.9
Msa1335550 AT5G26900.1 24.306 288 169 8 312 552 132 417 1.55e-15 79.7
Msa1335550 AT4G33260.1 23.390 295 163 9 312 552 136 421 3.60e-15 78.6
Msa1335550 AT4G33270.1 23.390 295 163 9 312 552 146 431 3.63e-15 78.6
Msa1335550 AT4G29830.1 23.098 368 213 12 241 593 8 320 4.56e-15 77.0
Msa1335550 AT1G49040.1 24.066 241 167 3 320 557 869 1096 5.67e-15 79.3
Msa1335550 AT5G27945.1 23.569 297 140 7 301 552 147 401 6.00e-15 77.8
Msa1335550 AT5G27080.1 23.875 289 170 7 312 552 129 415 6.32e-15 77.8
Msa1335550 AT4G35050.1 27.442 215 109 7 343 553 165 336 6.48e-15 77.8
Msa1335550 AT5G13840.1 23.856 306 182 9 309 570 177 475 6.68e-15 77.8
Msa1335550 AT5G13840.2 23.856 306 182 9 309 570 177 475 6.68e-15 77.8
Msa1335550 AT5G27570.1 24.436 266 177 10 301 552 168 423 1.01e-14 77.4
Msa1335550 AT1G73720.1 27.309 249 146 8 354 585 220 450 1.51e-14 77.0
Msa1335550 AT1G73720.1 27.711 166 118 2 428 592 211 375 2.23e-13 73.2
Msa1335550 AT1G73720.1 22.571 319 222 7 241 550 207 509 9.33e-11 65.1
Msa1335550 AT5G64630.2 23.262 374 207 12 250 557 16 375 1.54e-14 77.0
Msa1335550 AT3G21540.1 27.197 239 150 6 319 554 77 294 1.89e-14 77.4
Msa1335550 AT3G21540.1 25.234 321 196 9 244 550 403 693 8.54e-11 65.5
Msa1335550 AT2G05720.1 30.303 132 78 3 438 564 134 256 2.09e-14 74.3
Msa1335550 AT2G32950.1 22.424 330 216 12 290 591 354 671 4.37e-14 75.9
Msa1335550 AT5G64730.1 23.318 223 159 3 343 564 14 225 4.97e-14 73.6
Msa1335550 AT2G32950.2 24.242 264 169 10 347 591 307 558 5.03e-14 75.5
Msa1335550 AT1G29260.1 28.022 182 116 7 420 595 96 268 5.37e-14 73.9
Msa1335550 AT4G33260.2 23.368 291 160 9 312 548 136 417 5.51e-14 74.7
Msa1335550 AT4G22910.1 25.200 250 171 9 309 552 220 459 5.95e-14 75.1
Msa1335550 AT1G18830.1 28.755 233 139 10 295 511 105 326 6.33e-14 75.9
Msa1335550 AT1G18830.2 28.755 233 139 10 295 511 105 326 7.00e-14 75.5
Msa1335550 AT1G18830.3 28.755 233 139 10 295 511 105 326 7.00e-14 75.5
Msa1335550 AT5G64630.1 23.433 367 201 12 257 557 23 375 8.10e-14 73.9
Msa1335550 AT5G08560.1 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa1335550 AT5G08560.2 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa1335550 AT5G08560.3 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa1335550 AT1G52360.3 23.166 259 180 6 338 588 6 253 1.60e-13 74.3
Msa1335550 AT1G52360.3 21.141 298 223 5 298 590 7 297 1.72e-12 71.2
Msa1335550 AT1G52360.4 23.166 259 180 6 338 588 6 253 1.84e-13 74.3
Msa1335550 AT1G52360.4 21.141 298 223 5 298 590 7 297 1.83e-12 70.9
Msa1335550 AT1G52360.1 23.166 259 180 6 338 588 6 253 1.84e-13 74.3
Msa1335550 AT1G52360.1 21.141 298 223 5 298 590 7 297 1.83e-12 70.9
Msa1335550 AT1G52360.2 23.166 259 180 6 338 588 50 297 1.98e-13 73.9
Msa1335550 AT1G52360.2 21.141 298 223 5 298 590 51 341 1.74e-12 71.2
Msa1335550 AT1G10580.1 24.332 374 229 12 177 522 196 543 3.13e-13 73.2
Msa1335550 AT3G15980.1 21.477 298 222 5 298 590 7 297 3.80e-13 73.2
Msa1335550 AT3G15980.7 21.477 298 222 5 298 590 7 297 4.12e-13 73.2
Msa1335550 AT3G01340.1 25.362 276 140 11 341 590 50 285 4.56e-13 70.9
Msa1335550 AT3G01340.2 25.362 276 140 11 341 590 50 285 4.56e-13 70.9
Msa1335550 AT3G15980.3 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa1335550 AT3G15980.6 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa1335550 AT3G15980.2 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa1335550 AT3G15980.4 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa1335550 AT3G15980.5 21.477 298 222 5 298 590 7 297 7.15e-13 72.4
Msa1335550 AT2G16780.1 26.047 215 112 7 343 553 164 335 1.19e-12 70.5
Msa1335550 AT1G79990.1 24.354 271 185 6 290 549 36 297 1.38e-12 71.2
Msa1335550 AT1G79990.1 22.222 234 164 5 338 564 6 228 2.80e-12 70.5
Msa1335550 AT1G79990.2 24.354 271 185 6 290 549 36 297 1.58e-12 71.2
Msa1335550 AT1G79990.2 22.222 234 164 5 338 564 6 228 2.82e-12 70.5
Msa1335550 AT5G43920.1 24.522 314 187 11 234 508 211 513 5.55e-12 68.9
Msa1335550 AT4G11920.1 22.500 240 149 3 350 552 212 451 8.99e-12 68.2
Msa1335550 AT1G27840.1 26.852 216 124 8 340 552 36 220 1.08e-11 67.8
Msa1335550 AT1G27840.3 26.852 216 124 8 340 552 36 220 1.13e-11 67.8
Msa1335550 AT2G21390.1 24.291 247 160 7 309 552 96 318 1.47e-11 68.2
Msa1335550 AT1G19750.1 26.389 216 125 8 340 552 36 220 1.63e-11 67.0
Msa1335550 AT1G48870.2 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa1335550 AT1G48870.3 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa1335550 AT1G48870.1 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa1335550 AT3G18860.2 25.263 285 181 11 321 594 34 297 2.07e-11 67.4
Msa1335550 AT3G18860.1 25.263 285 181 11 321 594 34 297 2.18e-11 67.4
Msa1335550 AT2G33340.2 23.438 256 145 7 309 561 225 432 2.33e-11 67.0
Msa1335550 AT2G33340.1 23.438 256 145 7 309 561 225 432 2.33e-11 67.0
Msa1335550 AT2G33340.3 23.438 256 145 7 309 561 225 432 2.96e-11 66.6
Msa1335550 AT2G47410.4 24.046 262 154 8 343 568 50 302 4.36e-11 66.6
Msa1335550 AT5G49430.2 24.147 381 187 16 245 562 285 626 4.42e-11 66.6
Msa1335550 AT5G49430.1 24.147 381 187 16 245 562 285 626 4.42e-11 66.6
Msa1335550 AT2G46280.3 24.609 256 139 8 307 552 11 222 5.73e-11 63.9
Msa1335550 AT2G47410.2 24.046 262 154 8 343 568 231 483 6.49e-11 66.2
Msa1335550 AT2G47410.1 24.046 262 154 8 343 568 232 484 6.49e-11 66.2
Msa1335550 AT3G42660.1 23.397 312 176 9 241 550 56 306 7.19e-11 65.9
Msa1335550 AT1G62020.1 21.222 311 199 9 246 552 50 318 9.37e-11 65.5

Find 166 sgRNAs with CRISPR-Local

Find 581 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTCCGTTGTAAGTTTA+TGG 0.077339 tig0000496:-69002 Msa1335550:three_prime_UTR
ATTCAAGGACCATATATTTA+TGG 0.160905 tig0000496:+69297 None:intergenic
GCCAACACCAATTTCTTATT+AGG 0.182828 tig0000496:+70895 None:intergenic
ATTCCACTTCAGAGAAAATA+TGG 0.199133 tig0000496:+72068 None:intergenic
GGGATTCAACAGCTCGTATT+TGG 0.216439 tig0000496:-72961 Msa1335550:CDS
ATGATGGTCAAGCACGAATT+TGG 0.225147 tig0000496:-72336 Msa1335550:CDS
ATATTGACAGAACTGTATTT+TGG 0.226598 tig0000496:-69082 Msa1335550:three_prime_UTR
ATGCCCCATTGATGGAAATT+TGG 0.235574 tig0000496:-76601 Msa1335550:CDS
CAAGAATGGTTAAAACTTAA+AGG 0.236174 tig0000496:+69024 None:intergenic
AAAGGAGATTATCTTCTTAC+TGG 0.244089 tig0000496:-72042 Msa1335550:CDS
TAAGTCAGATGTGACAATTT+TGG 0.259321 tig0000496:-75156 Msa1335550:CDS
ATGATACATGTTTGCAAGAT+TGG 0.283530 tig0000496:-71766 Msa1335550:CDS
ACAGGATCCTTTCTTGCATC+AGG 0.293482 tig0000496:-75005 Msa1335550:CDS
CCAACACCAATTTCTTATTA+GGG 0.296590 tig0000496:+70896 None:intergenic
AAATAACCCTAATAAGAAAT+TGG 0.302756 tig0000496:-70902 Msa1335550:CDS
TCGTTATCATGTTGCATTCT+CGG 0.310013 tig0000496:-68904 Msa1335550:three_prime_UTR
TAACAATACAGTTTGCGTTT+TGG 0.312131 tig0000496:-69182 Msa1335550:CDS
CTTGAGGAGGATGGAGCATT+TGG 0.317776 tig0000496:-75964 Msa1335550:CDS
TTCCACATCCCATAGCTTTA+CGG 0.321852 tig0000496:+69682 None:intergenic
TCAGAAGGGACTACAGTTCT+TGG 0.325341 tig0000496:-76550 Msa1335550:CDS
CTCGTTGAAGAGAACGGGTT+TGG 0.329647 tig0000496:+77376 None:intergenic
GATCAAGAAGATAAGGTTAA+TGG 0.329734 tig0000496:-76102 Msa1335550:CDS
TGTTGGTGTTGCAGCACATC+AGG 0.356475 tig0000496:-72886 Msa1335550:CDS
GTGAAGTTAATTGTATCAAA+TGG 0.359842 tig0000496:-71296 Msa1335550:CDS
GTTCAACACTCGACGTTGAT+TGG 0.363966 tig0000496:-71828 Msa1335550:CDS
TTTCGCTACCTTCAAGAATC+AGG 0.370255 tig0000496:-77313 Msa1335550:intron
CATAATCATTAGTAACTAGT+AGG 0.373232 tig0000496:-68979 Msa1335550:three_prime_UTR
GGATCCCACAGGTTCATTAC+TGG 0.376344 tig0000496:-71274 Msa1335550:CDS
TCTTCATCCGGGAATTATAT+AGG 0.385187 tig0000496:-77551 Msa1335550:five_prime_UTR
AATGATCTTGCCATCATTCA+AGG 0.388091 tig0000496:+69282 None:intergenic
CACAGTCGAAGGGTCGTTCT+TGG 0.388341 tig0000496:+72907 None:intergenic
ATGACAAATCCATAAATATA+TGG 0.390659 tig0000496:-69306 Msa1335550:CDS
GAACATACCTTGGAGCTATC+TGG 0.400897 tig0000496:+68874 None:intergenic
TCGATGGGTCTGCAATTGTA+TGG 0.402215 tig0000496:-72014 Msa1335550:CDS
GGCCCTTGAACCTCTTCATC+CGG 0.408311 tig0000496:-77563 Msa1335550:five_prime_UTR
CTGGCTAAATACTCACCATT+GGG 0.418567 tig0000496:+69337 None:intergenic
CCATGCTCGTTGAAGAGAAC+GGG 0.420217 tig0000496:+77371 None:intergenic
CTTCTTACTGGAAGTTTCGA+TGG 0.421511 tig0000496:-72030 Msa1335550:CDS
GGCAAGTCCTATATAATTCC+CGG 0.423859 tig0000496:+77544 None:intergenic
GGTACCAAATTTCCATCAAT+GGG 0.429149 tig0000496:+76597 None:intergenic
AAAATTGTCACATCTGACTT+AGG 0.438471 tig0000496:+75158 None:intergenic
CTTGCAACCGGTTCTTATGA+TGG 0.442121 tig0000496:-72352 Msa1335550:CDS
AGAAAAGGAAAGACAGGAAA+GGG 0.448728 tig0000496:-76217 Msa1335550:CDS
TGAGAAGAGCCACCTTACTT+TGG 0.449886 tig0000496:-69140 Msa1335550:three_prime_UTR
GCTATCAGATGGAGCCCAAC+TGG 0.449961 tig0000496:-70934 Msa1335550:CDS
GCACGAATTTGGACCGCTAA+TGG 0.450598 tig0000496:-72325 Msa1335550:intron
TGGTACCAAATTTCCATCAA+TGG 0.450794 tig0000496:+76596 None:intergenic
TGCTTGACCATCATAAGAAC+CGG 0.451683 tig0000496:+72345 None:intergenic
TTATTAGGGTTATTTGTAGC+AGG 0.457403 tig0000496:+70910 None:intergenic
AAAGTAAGGTGGCTCTTCTC+AGG 0.459176 tig0000496:+69142 None:intergenic
ATGACATACCTGATTCTTGA+AGG 0.464229 tig0000496:+77305 None:intergenic
AAGATGTCACTACACTTGAT+TGG 0.465443 tig0000496:-72841 Msa1335550:CDS
ATTAACAAATGCCCCATTGA+TGG 0.468955 tig0000496:-76609 Msa1335550:CDS
AAGGGAGAAAGAACGTGAAA+AGG 0.469916 tig0000496:-76199 Msa1335550:CDS
AAATCAGATCAGTAGAGAAA+TGG 0.476182 tig0000496:-76130 Msa1335550:CDS
AACATGTATCATGGTGTCAT+TGG 0.480498 tig0000496:+71777 None:intergenic
TGATGGAAATTTGGTACCAC+CGG 0.482954 tig0000496:-76592 Msa1335550:CDS
TGAAGTTAATTGTATCAAAT+GGG 0.484187 tig0000496:-71295 Msa1335550:CDS
TACCAACCCTGATGCAAGAA+AGG 0.485782 tig0000496:+74998 None:intergenic
GGATTTGTCATGGGACCCAC+TGG 0.485949 tig0000496:+69318 None:intergenic
CAGGATCCTTTCTTGCATCA+GGG 0.486170 tig0000496:-75004 Msa1335550:intron
GACAAGAGAAAAGGAAAGAC+AGG 0.487085 tig0000496:-76223 Msa1335550:CDS
AAATACATAGTAGCAGTAGT+AGG 0.487351 tig0000496:-77633 None:intergenic
GTACATATGTCCATGGGCTC+TGG 0.487988 tig0000496:+75209 None:intergenic
CTTAGGTCTGTGCTTGTGCA+TGG 0.489170 tig0000496:-75034 Msa1335550:intron
TTAGTTAATGACGGTTGTAA+AGG 0.490788 tig0000496:-77584 Msa1335550:five_prime_UTR
AAACTAATTCATAGCTTGAA+TGG 0.491309 tig0000496:-69653 Msa1335550:CDS
ATACAGTTCTGTCAATATCA+TGG 0.492139 tig0000496:+69087 None:intergenic
TATATTTATGGATTTGTCAT+GGG 0.493957 tig0000496:+69309 None:intergenic
TTCTTACTGGAAGTTTCGAT+GGG 0.494004 tig0000496:-72029 Msa1335550:CDS
CCCGTTCTCTTCAACGAGCA+TGG 0.495827 tig0000496:-77371 Msa1335550:exon
TCTCTGAAGTGGAATAAGAA+AGG 0.497421 tig0000496:-72060 Msa1335550:CDS
AATATATGGTCCTTGAATGA+TGG 0.499260 tig0000496:-69292 Msa1335550:CDS
TTGAGCAACTAGCCAAAGTA+AGG 0.500908 tig0000496:+69128 None:intergenic
TTGACTCTACCGTAAAGCTA+TGG 0.503121 tig0000496:-69691 Msa1335550:CDS
TTCCACTTCAGAGAAAATAT+GGG 0.504853 tig0000496:+72069 None:intergenic
ATTGAGTTCGACGGAGGTGA+TGG 0.504919 tig0000496:+77345 None:intergenic
ACTGGCTAAATACTCACCAT+TGG 0.504998 tig0000496:+69336 None:intergenic
GCTTGTGCATGGAGTCCTAC+AGG 0.508560 tig0000496:-75023 Msa1335550:CDS
TATTTGTAGCAGGACCAGTT+GGG 0.508917 tig0000496:+70920 None:intergenic
AAGCTATGGGATGTGGAACT+CGG 0.509332 tig0000496:-69677 Msa1335550:CDS
GGTCTCAGATCAAGAAGATA+AGG 0.514110 tig0000496:-76109 Msa1335550:CDS
CATAGTAGCAGTAGTAGGCT+AGG 0.515452 tig0000496:-77628 None:intergenic
CCCTAATAAGAAATTGGTGT+TGG 0.516897 tig0000496:-70896 Msa1335550:CDS
GAGGAGGATGGAGCATTTGG+AGG 0.517057 tig0000496:-75961 Msa1335550:intron
ATATATTTATGGATTTGTCA+TGG 0.524784 tig0000496:+69308 None:intergenic
AAGAAGAAGAAAACGACAGA+GGG 0.524916 tig0000496:-76292 Msa1335550:CDS
TCTTGTTACATTTGTTCAGA+AGG 0.525010 tig0000496:-76565 Msa1335550:CDS
GAGGGGACACTACTTGCAAC+CGG 0.525092 tig0000496:-72364 Msa1335550:CDS
TACCGTAAAGCTATGGGATG+TGG 0.533670 tig0000496:-69684 Msa1335550:CDS
CCGCGGTCTGACAAGAGAAA+AGG 0.535025 tig0000496:-76232 Msa1335550:CDS
ATAAGAAATTGGTGTTGGCT+AGG 0.535443 tig0000496:-70891 Msa1335550:intron
AATCTTGCAAACATGTATCA+TGG 0.536038 tig0000496:+71768 None:intergenic
GAGAAAAGGAAAGACAGGAA+AGG 0.536296 tig0000496:-76218 Msa1335550:CDS
TTCCCGGATGAAGAGGTTCA+AGG 0.538031 tig0000496:+77560 None:intergenic
CTTGTTACATTTGTTCAGAA+GGG 0.539198 tig0000496:-76564 Msa1335550:CDS
CGATGGGTCTGCAATTGTAT+GGG 0.539354 tig0000496:-72013 Msa1335550:CDS
GCTAGTAGTTTAGTTAATGA+CGG 0.540262 tig0000496:-77593 Msa1335550:five_prime_UTR
GGGACTACAGTTCTTGGAGA+TGG 0.540425 tig0000496:-76544 Msa1335550:CDS
TAAGGTTAATGTAAAGCTTG+AGG 0.542812 tig0000496:-75980 Msa1335550:CDS
GCCCTTGAACCTCTTCATCC+GGG 0.544566 tig0000496:-77562 Msa1335550:five_prime_UTR
AATGTAAAGCTTGAGGAGGA+TGG 0.549555 tig0000496:-75973 Msa1335550:CDS
TAGTAGGCTAGGTGGTGTGT+AGG 0.553370 tig0000496:-77617 Msa1335550:five_prime_UTR
TGTCAACGCGGCAGAAGACA+CGG 0.553620 tig0000496:+77499 None:intergenic
TGATGTTGTACATATGTCCA+TGG 0.557105 tig0000496:+75202 None:intergenic
TTGTATAGGACCAGAGCCCA+TGG 0.557449 tig0000496:-75219 Msa1335550:intron
AAGAAAGGGCCTACCATTAG+CGG 0.557736 tig0000496:+72312 None:intergenic
ACGTGAAAAGGATAAAGAGA+AGG 0.558461 tig0000496:-76187 Msa1335550:CDS
ATGTGTATAAACCTGGTGCC+CGG 0.558730 tig0000496:+71717 None:intergenic
TGACTCTACCGTAAAGCTAT+GGG 0.561117 tig0000496:-69690 Msa1335550:CDS
TTATTTGTAGCAGGACCAGT+TGG 0.561581 tig0000496:+70919 None:intergenic
AGGAGATATATGCTATCAGA+TGG 0.562544 tig0000496:-70945 Msa1335550:CDS
ATTAAAACATACAACGGCAA+TGG 0.567817 tig0000496:-69262 Msa1335550:CDS
ATAATCATTAGTAACTAGTA+GGG 0.569724 tig0000496:-68978 Msa1335550:three_prime_UTR
GTTGGTGTTGCAGCACATCA+GGG 0.572151 tig0000496:-72885 Msa1335550:CDS
GATGGAAATTTGGTACCACC+GGG 0.577174 tig0000496:-76591 Msa1335550:CDS
TGCAACACCAACACAGTCGA+AGG 0.580347 tig0000496:+72896 None:intergenic
TTACAACGGAGTTACAAGAA+TGG 0.580824 tig0000496:+69010 None:intergenic
GAGGTCTGTTGGAACAAGGA+GGG 0.582876 tig0000496:-69229 Msa1335550:CDS
ACTATTGCATTCAGCCCCAA+TGG 0.585345 tig0000496:-69352 Msa1335550:CDS
TGGAAATTTGGTACCACCGG+GGG 0.587763 tig0000496:-76589 Msa1335550:CDS
TTTGGAAGGGCATAAGTCAG+AGG 0.594030 tig0000496:-75138 Msa1335550:intron
TACCCAATGAGAACATACCT+TGG 0.597919 tig0000496:+68864 None:intergenic
AGCTATGGGATGTGGAACTC+GGG 0.599942 tig0000496:-69676 Msa1335550:CDS
TCCCGGATGAAGAGGTTCAA+GGG 0.601305 tig0000496:+77561 None:intergenic
TATATAATTCCCGGATGAAG+AGG 0.602089 tig0000496:+77553 None:intergenic
AAAACATACAACGGCAATGG+AGG 0.602122 tig0000496:-69259 Msa1335550:CDS
CATGATAACGATTATACAGA+CGG 0.602538 tig0000496:+68916 None:intergenic
GCCATGCTCGTTGAAGAGAA+CGG 0.607808 tig0000496:+77370 None:intergenic
TTTGTGTTTGGGAATGAGGG+TGG 0.611504 tig0000496:-76633 Msa1335550:CDS
CGAGGCCAGTAATGAACCTG+TGG 0.613287 tig0000496:+71269 None:intergenic
ACGCGGCAGAAGACACGGGT+GGG 0.622747 tig0000496:+77504 None:intergenic
GAACGACCCTTCGACTGTGT+TGG 0.624305 tig0000496:-72903 Msa1335550:CDS
TGTATCAAATGGGATCCCAC+AGG 0.627567 tig0000496:-71285 Msa1335550:CDS
GACGAGATAATTGAGTTCGA+CGG 0.629252 tig0000496:+77336 None:intergenic
GTCAACGCGGCAGAAGACAC+GGG 0.629708 tig0000496:+77500 None:intergenic
GATGTTGTACATATGTCCAT+GGG 0.631848 tig0000496:+75203 None:intergenic
AATGGTGAGTATTTAGCCAG+TGG 0.632034 tig0000496:-69334 Msa1335550:CDS
AAGATCATTAAAACATACAA+CGG 0.633785 tig0000496:-69268 Msa1335550:CDS
ATGGTGAGTATTTAGCCAGT+GGG 0.634149 tig0000496:-69333 Msa1335550:CDS
AGTGTTATCGTCTGAACACG+AGG 0.635786 tig0000496:+71251 None:intergenic
TGAGGTCTGTTGGAACAAGG+AGG 0.635956 tig0000496:-69230 Msa1335550:CDS
AGCAACTAGCCAAAGTAAGG+TGG 0.639749 tig0000496:+69131 None:intergenic
AACGCGGCAGAAGACACGGG+TGG 0.640813 tig0000496:+77503 None:intergenic
GAGATAATTGAGTTCGACGG+AGG 0.641503 tig0000496:+77339 None:intergenic
GGTTAATGTAAAGCTTGAGG+AGG 0.643371 tig0000496:-75977 Msa1335550:CDS
AGTAGCAGTAGTAGGCTAGG+TGG 0.645113 tig0000496:-77625 None:intergenic
GAGTACATTAAGCAAACACA+AGG 0.647125 tig0000496:-72094 Msa1335550:CDS
TTCAGACGATAACACTGCAA+AGG 0.647658 tig0000496:-71244 Msa1335550:intron
TTGGTGTTGCAGCACATCAG+GGG 0.650194 tig0000496:-72884 Msa1335550:CDS
ACAAATGTAACAAGAGCCCC+CGG 0.650451 tig0000496:+76573 None:intergenic
GATGCAAGAAAGGATCCTGT+AGG 0.654010 tig0000496:+75008 None:intergenic
ATTATGCCATAAACTTACAA+CGG 0.661222 tig0000496:+68996 None:intergenic
TTCATAGCTTGAATGGACAC+AGG 0.666219 tig0000496:-69646 Msa1335550:intron
GCAACACCAACACAGTCGAA+GGG 0.676096 tig0000496:+72897 None:intergenic
TCTGCTGCCAGATAGCTCCA+AGG 0.680870 tig0000496:-68881 Msa1335550:three_prime_UTR
AAAGAAGAAGAAAACGACAG+AGG 0.683677 tig0000496:-76293 Msa1335550:CDS
AAAGAGCATGATGGTGACCG+CGG 0.685210 tig0000496:-76249 Msa1335550:CDS
GAGGCCAGTAATGAACCTGT+GGG 0.694911 tig0000496:+71270 None:intergenic
AGAAGAAGAAAACGACAGAG+GGG 0.711456 tig0000496:-76291 Msa1335550:CDS
TGGCTAAATACTCACCATTG+GGG 0.715065 tig0000496:+69338 None:intergenic
ATGGAAATTTGGTACCACCG+GGG 0.720037 tig0000496:-76590 Msa1335550:CDS
GTGTGCTGTGTGTGTCAACG+CGG 0.735841 tig0000496:+77487 None:intergenic
TCTGACTTAGGAAATTCACA+TGG 0.743110 tig0000496:+75170 None:intergenic
GTACCAAATTTCCATCAATG+GGG 0.758288 tig0000496:+76598 None:intergenic
AGTACATTAAGCAAACACAA+GGG 0.758457 tig0000496:-72093 Msa1335550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCTTTTTTTCTTTTT+TGG + tig0000496:69098-69117 None:intergenic 10.0%
!! TAAAATAAATAAAATTTGTC+AGG - tig0000496:73900-73919 Msa1335550:intron 10.0%
!!! TACTTTTGATTTTTTAATTT+CGG - tig0000496:74636-74655 Msa1335550:intron 10.0%
!! AAACAAATATTTCAAAAGTA+TGG + tig0000496:70913-70932 None:intergenic 15.0%
!! TTTATTAGAACAATTCAATT+AGG - tig0000496:72079-72098 Msa1335550:CDS 15.0%
!! ATATGAATAAAATAGGTTAT+TGG - tig0000496:72888-72907 Msa1335550:CDS 15.0%
!!! TCAAATCTAAATTCATTTTA+AGG - tig0000496:72915-72934 Msa1335550:CDS 15.0%
!!! ATAAATTTGAAAGGTATTTT+AGG - tig0000496:72960-72979 Msa1335550:CDS 15.0%
!! TGAAAGAAATAAAAGATAAT+AGG - tig0000496:73271-73290 Msa1335550:intron 15.0%
!! AAAAGATAATAGGATATAAA+AGG - tig0000496:73281-73300 Msa1335550:intron 15.0%
!! TTTACTACTAATAAAATGTA+AGG + tig0000496:73307-73326 None:intergenic 15.0%
!!! AAAAAACTGATTTTTAAAGT+AGG - tig0000496:73978-73997 Msa1335550:intron 15.0%
!!! AAAAACTGATTTTTAAAGTA+GGG - tig0000496:73979-73998 Msa1335550:intron 15.0%
!! ACTAAGATTTATCAAAATAA+AGG + tig0000496:74235-74254 None:intergenic 15.0%
!!! ATTATATTGATTTTTTAAGC+TGG - tig0000496:74289-74308 Msa1335550:intron 15.0%
!! TCTATAAAATAATTTCTTGA+TGG + tig0000496:75314-75333 None:intergenic 15.0%
!!! AGTTAATTTCACAAATATTT+TGG + tig0000496:75366-75385 None:intergenic 15.0%
!!! ATAAGTATATTCATGATTTT+AGG - tig0000496:75444-75463 Msa1335550:intron 15.0%
!!! TAAGTATATTCATGATTTTA+GGG - tig0000496:75445-75464 Msa1335550:intron 15.0%
!! ATATTGTATTTATAGTTGTT+GGG + tig0000496:76082-76101 None:intergenic 15.0%
!! TTAGAAAGTTATGATAAATT+AGG + tig0000496:76596-76615 None:intergenic 15.0%
!!! ATTCTTTCCTTAATCTTTTT+CGG - tig0000496:69258-69277 Msa1335550:CDS 20.0%
!! AGTGAATACAAGAATAAAAA+AGG + tig0000496:70010-70029 None:intergenic 20.0%
!!! ATAAAAATCTAGTAATGGAT+GGG + tig0000496:70876-70895 None:intergenic 20.0%
!!! AAATATTTCAAAAGTATGGT+TGG + tig0000496:70909-70928 None:intergenic 20.0%
!!! AAGTTTTCATTCAATTGTAT+AGG - tig0000496:71264-71283 Msa1335550:CDS 20.0%
!! TTAATCTCAATTTAGCAATA+AGG - tig0000496:71707-71726 Msa1335550:intron 20.0%
!!! ACAGAAAATAAAGATTGTTT+TGG - tig0000496:71798-71817 Msa1335550:CDS 20.0%
!! AGAAAATCATTCATAAGAAT+AGG + tig0000496:71894-71913 None:intergenic 20.0%
!! TTGAATTGTTCTAATAAACA+TGG + tig0000496:72077-72096 None:intergenic 20.0%
!! GAATTAAAACATACATAAAC+TGG - tig0000496:72340-72359 Msa1335550:CDS 20.0%
!! TAGGAACACTATTATTAAAT+AGG - tig0000496:72979-72998 Msa1335550:intron 20.0%
!!! TTTATGTCGTTTAAAACTAA+TGG - tig0000496:73079-73098 Msa1335550:intron 20.0%
!! AAAAGCAATCAATTCAAAAA+GGG + tig0000496:73138-73157 None:intergenic 20.0%
!! AAAAAGCAATCAATTCAAAA+AGG + tig0000496:73139-73158 None:intergenic 20.0%
!! AAAAATAGACAAAAGTTGTT+AGG + tig0000496:73193-73212 None:intergenic 20.0%
!!! CTTTTGTCTATTTTTTTATC+AGG - tig0000496:73198-73217 Msa1335550:intron 20.0%
!! AGTAAAATATATATGATGCT+TGG - tig0000496:73321-73340 Msa1335550:intron 20.0%
!! GAAATAGATAACAATAACAA+GGG + tig0000496:73409-73428 None:intergenic 20.0%
!! AGAAATAGATAACAATAACA+AGG + tig0000496:73410-73429 None:intergenic 20.0%
!! GAAAATAAGTAGATTAATAG+AGG - tig0000496:73436-73455 Msa1335550:intron 20.0%
!!! AGGATAATTTTGTTCTTATT+AGG - tig0000496:73838-73857 Msa1335550:intron 20.0%
!!! GGATAATTTTGTTCTTATTA+GGG - tig0000496:73839-73858 Msa1335550:intron 20.0%
!!! TTTAAGTCTTAAATGCATTT+TGG + tig0000496:74041-74060 None:intergenic 20.0%
!! ATTGTATAATAAATGCAGTA+GGG + tig0000496:74882-74901 None:intergenic 20.0%
!! TATTGTATAATAAATGCAGT+AGG + tig0000496:74883-74902 None:intergenic 20.0%
!!! TTAGCATTTATTACATGTTT+TGG - tig0000496:75056-75075 Msa1335550:intron 20.0%
!! TGAAGTTAATTGTATCAAAT+GGG - tig0000496:75202-75221 Msa1335550:CDS 20.0%
!!! TAAATAATGGTTTTTTTCGT+AGG - tig0000496:75532-75551 Msa1335550:intron 20.0%
!! AAATAACCCTAATAAGAAAT+TGG - tig0000496:75595-75614 Msa1335550:intron 20.0%
!!! ACTCTAAAAATAGAATTTGT+GGG - tig0000496:75942-75961 Msa1335550:intron 20.0%
!! CATATTGTATTTATAGTTGT+TGG + tig0000496:76083-76102 None:intergenic 20.0%
!! ACTTTATATGAAAAACTACA+CGG + tig0000496:76200-76219 None:intergenic 20.0%
!!! AAAGTTGTTTAGTTTGATTA+TGG - tig0000496:76215-76234 Msa1335550:CDS 20.0%
!! TGATAAAAACTAATACTTTG+AGG - tig0000496:76359-76378 Msa1335550:CDS 20.0%
!!! ATAAGAATTTGAAGAGTTTT+AGG - tig0000496:76629-76648 Msa1335550:CDS 20.0%
!!! ATTTTTCTCTTAATACTAGA+CGG - tig0000496:76730-76749 Msa1335550:intron 20.0%
!! TTAAGTATGAAATGAAAGTT+AGG + tig0000496:76998-77017 None:intergenic 20.0%
!! AACTTCTATTATAGTTTATC+TGG - tig0000496:77025-77044 Msa1335550:intron 20.0%
!! TATATTTATGGATTTGTCAT+GGG + tig0000496:77191-77210 None:intergenic 20.0%
!! ATATATTTATGGATTTGTCA+TGG + tig0000496:77192-77211 None:intergenic 20.0%
!! ATGACAAATCCATAAATATA+TGG - tig0000496:77191-77210 Msa1335550:intron 20.0%
!! AAGATCATTAAAACATACAA+CGG - tig0000496:77229-77248 Msa1335550:intron 20.0%
!! ATAATCATTAGTAACTAGTA+GGG - tig0000496:77519-77538 Msa1335550:five_prime_UTR 20.0%
!!! TTTTTCTTTTTTGGTGTGAA+GGG + tig0000496:69089-69108 None:intergenic 25.0%
!!! TTTTTTCTTTTTTGGTGTGA+AGG + tig0000496:69090-69109 None:intergenic 25.0%
!! TGTTCGTTAATTGATTTCAT+TGG - tig0000496:69534-69553 Msa1335550:intron 25.0%
! ATATAAGGTCAATCTAAACT+CGG + tig0000496:69589-69608 None:intergenic 25.0%
!!! AAACAACATAGTGTTTTTTG+TGG - tig0000496:69673-69692 Msa1335550:CDS 25.0%
! AAAAAGAAAGACAAGGTTAA+TGG - tig0000496:70437-70456 Msa1335550:intron 25.0%
! AAAGAAGATGCTAAAAAAGA+AGG - tig0000496:70467-70486 Msa1335550:intron 25.0%
! AAAAAAGAAGGTAAGGTTAA+TGG - tig0000496:70479-70498 Msa1335550:intron 25.0%
! AAAATGAGAAAAACTAACAG+AGG + tig0000496:70703-70722 None:intergenic 25.0%
!!! TAAAAATCTAGTAATGGATG+GGG + tig0000496:70875-70894 None:intergenic 25.0%
!! GATAAAAATCTAGTAATGGA+TGG + tig0000496:70877-70896 None:intergenic 25.0%
! GATGGATAAAAATCTAGTAA+TGG + tig0000496:70881-70900 None:intergenic 25.0%
! ACTCAGGATATTGAATAATA+AGG + tig0000496:71077-71096 None:intergenic 25.0%
! CTCGATAAAAAAAAATACTC+AGG + tig0000496:71093-71112 None:intergenic 25.0%
!! ACTTTTCAATCATCTTTTGA+AGG + tig0000496:71248-71267 None:intergenic 25.0%
! TAGCAATAAGGTTAATATCT+AGG - tig0000496:71719-71738 Msa1335550:intron 25.0%
!! GACTATTTTGTTAACTATCA+TGG + tig0000496:71921-71940 None:intergenic 25.0%
!! AATCGTTTGTTAGTGATATT+AGG + tig0000496:72037-72056 None:intergenic 25.0%
! ACAAATAGCATAATCAATAG+TGG - tig0000496:72318-72337 Msa1335550:intron 25.0%
! ACCTGTCATATGAATAAAAT+AGG - tig0000496:72881-72900 Msa1335550:CDS 25.0%
!! ACCTATTTTATTCATATGAC+AGG + tig0000496:72885-72904 None:intergenic 25.0%
! AAAGCAATCAATTCAAAAAG+GGG + tig0000496:73137-73156 None:intergenic 25.0%
!! TTCAACAGTTTTTAATGACA+TGG + tig0000496:73255-73274 None:intergenic 25.0%
!! TTGTTATCATCTGAACTTTT+AGG - tig0000496:73509-73528 Msa1335550:intron 25.0%
!! TAATTTTGTTCTTATTAGGG+AGG - tig0000496:73842-73861 Msa1335550:intron 25.0%
! TCCAGATAAAAGTTAAATAG+AGG - tig0000496:73951-73970 Msa1335550:intron 25.0%
! CCAGATAAAAGTTAAATAGA+GGG - tig0000496:73952-73971 Msa1335550:intron 25.0%
!! TTTTGATAAATCTTAGTGTC+TGG - tig0000496:74238-74257 Msa1335550:intron 25.0%
! AAAGTAGAAGATCATAAACA+TGG + tig0000496:74622-74641 None:intergenic 25.0%
!!! TTTTAATTTCGGCTTTGTTT+AGG - tig0000496:74647-74666 Msa1335550:intron 25.0%
! TTGTATAATAAATGCAGTAG+GGG + tig0000496:74881-74900 None:intergenic 25.0%
! GTCAGATACATTAGAAATTT+GGG + tig0000496:74974-74993 None:intergenic 25.0%
! AGTCAGATACATTAGAAATT+TGG + tig0000496:74975-74994 None:intergenic 25.0%
!! ATTCCACTAAACTAGTTTAT+TGG - tig0000496:75087-75106 Msa1335550:intron 25.0%
! GTGAAGTTAATTGTATCAAA+TGG - tig0000496:75201-75220 Msa1335550:CDS 25.0%
! TTTGGTAAAAAGACATTTAC+TGG + tig0000496:75348-75367 None:intergenic 25.0%
! AAACATGAATATTCCCTAAT+TGG + tig0000496:75485-75504 None:intergenic 25.0%
!!! TTCATGTTTTTGAACTATAC+AGG - tig0000496:75496-75515 Msa1335550:intron 25.0%
! TTGTTGGGAAATCTAAATAA+TGG - tig0000496:75519-75538 Msa1335550:intron 25.0%
! AATTAAAGTATAGTGCTCTA+AGG - tig0000496:75773-75792 Msa1335550:intron 25.0%
! ATTAAAGTATAGTGCTCTAA+GGG - tig0000496:75774-75793 Msa1335550:intron 25.0%
!! CACTCTAAAAATAGAATTTG+TGG - tig0000496:75941-75960 Msa1335550:intron 25.0%
! TTGACAGCTTAAAAACATTT+GGG + tig0000496:76046-76065 None:intergenic 25.0%
! ATTGACAGCTTAAAAACATT+TGG + tig0000496:76047-76066 None:intergenic 25.0%
!!! GCTTGTTGTCTTTTTAAATT+TGG - tig0000496:76265-76284 Msa1335550:CDS 25.0%
!! AATTTTGTAGAATGTGATGA+GGG + tig0000496:76523-76542 None:intergenic 25.0%
! AATGACTAAATAGTGTCAAA+AGG + tig0000496:76766-76785 None:intergenic 25.0%
! AAACTAATTCATAGCTTGAA+TGG - tig0000496:76844-76863 Msa1335550:intron 25.0%
!! AGCTTTTAATGTTATATCAG+TGG - tig0000496:76887-76906 Msa1335550:intron 25.0%
! ATTCAAGGACCATATATTTA+TGG + tig0000496:77203-77222 None:intergenic 25.0%
! AACTGTATTGTTAGAAAAAC+AGG + tig0000496:77308-77327 None:intergenic 25.0%
!! ATATTGACAGAACTGTATTT+TGG - tig0000496:77415-77434 Msa1335550:five_prime_UTR 25.0%
! CAAGAATGGTTAAAACTTAA+AGG + tig0000496:77476-77495 None:intergenic 25.0%
! ATTATGCCATAAACTTACAA+CGG + tig0000496:77504-77523 None:intergenic 25.0%
! CATAATCATTAGTAACTAGT+AGG - tig0000496:77518-77537 Msa1335550:five_prime_UTR 25.0%
GCTAGTAGTTTAGTTAATGA+CGG - tig0000496:68904-68923 Msa1335550:three_prime_UTR 30.0%
TTAGTTAATGACGGTTGTAA+AGG - tig0000496:68913-68932 Msa1335550:three_prime_UTR 30.0%
TTTCAATTCATTCAAGCCAA+CGG - tig0000496:69333-69352 Msa1335550:CDS 30.0%
GCTGAAAAATTGATACGATT+TGG - tig0000496:69397-69416 Msa1335550:intron 30.0%
!! TAATCTTGCTGTTCTTGTTA+TGG - tig0000496:69696-69715 Msa1335550:CDS 30.0%
TGTTATGGCCTTCTTATAAA+GGG + tig0000496:69773-69792 None:intergenic 30.0%
ATGTTATGGCCTTCTTATAA+AGG + tig0000496:69774-69793 None:intergenic 30.0%
TCTTGTTACATTTGTTCAGA+AGG - tig0000496:69932-69951 Msa1335550:intron 30.0%
CTTGTTACATTTGTTCAGAA+GGG - tig0000496:69933-69952 Msa1335550:intron 30.0%
!! TTTTTAAGCTCTTCATACCT+GGG - tig0000496:70061-70080 Msa1335550:intron 30.0%
! GGTTTCATGTTGATAAATGT+TGG - tig0000496:70082-70101 Msa1335550:intron 30.0%
! TTTTTCGTTCTTACAACCTT+TGG - tig0000496:70136-70155 Msa1335550:intron 30.0%
! TCTTTTGTGATAAGATCCAA+AGG + tig0000496:70155-70174 None:intergenic 30.0%
AAATCAGATCAGTAGAGAAA+TGG - tig0000496:70367-70386 Msa1335550:intron 30.0%
GATCAAGAAGATAAGGTTAA+TGG - tig0000496:70395-70414 Msa1335550:intron 30.0%
AGATGCTAAAAAGAAAGACA+AGG - tig0000496:70430-70449 Msa1335550:intron 30.0%
AGATGCTAAAAAAGAAGGTA+AGG - tig0000496:70472-70491 Msa1335550:intron 30.0%
! TGGTGCTAAAAAAGAAGATA+AGG - tig0000496:70499-70518 Msa1335550:intron 30.0%
TAAGGTTAATGTAAAGCTTG+AGG - tig0000496:70517-70536 Msa1335550:intron 30.0%
ATAAACCAAATCAGTTGAAC+AGG + tig0000496:70568-70587 None:intergenic 30.0%
ATTGTATGACATCGATACTT+GGG + tig0000496:70672-70691 None:intergenic 30.0%
AATTGTATGACATCGATACT+TGG + tig0000496:70673-70692 None:intergenic 30.0%
!! AAAAATCTAGTAATGGATGG+GGG + tig0000496:70874-70893 None:intergenic 30.0%
! ATTTCAAAAGTATGGTTGGA+AGG + tig0000496:70905-70924 None:intergenic 30.0%
AATCTTAAATCTGACAGAAG+TGG + tig0000496:71015-71034 None:intergenic 30.0%
GTTGCAACTTACAAGTAAAT+TGG + tig0000496:71134-71153 None:intergenic 30.0%
AAAATTGTCACATCTGACTT+AGG + tig0000496:71342-71361 None:intergenic 30.0%
! TAAGTCAGATGTGACAATTT+TGG - tig0000496:71341-71360 Msa1335550:intron 30.0%
! AATCCTTCATGTTTGTGTTT+TGG - tig0000496:71396-71415 Msa1335550:intron 30.0%
AAACCAAAACACAAACATGA+AGG + tig0000496:71402-71421 None:intergenic 30.0%
!!! AGATTGTTTTGGAAAAGATC+AGG - tig0000496:71809-71828 Msa1335550:CDS 30.0%
AAGATTATTAGACCACCTAA+GGG + tig0000496:71994-72013 None:intergenic 30.0%
AAAGATTATTAGACCACCTA+AGG + tig0000496:71995-72014 None:intergenic 30.0%
!! CTAATAAACATGGTTAGTCT+AGG + tig0000496:72067-72086 None:intergenic 30.0%
CTCACGAAATCATGTTTATA+TGG - tig0000496:72137-72156 Msa1335550:intron 30.0%
AGCTAAATCTCTTAGAGATT+AGG + tig0000496:72282-72301 None:intergenic 30.0%
! AAACATAAGGGTTACGATTT+TGG + tig0000496:72429-72448 None:intergenic 30.0%
AAAATCGTAACCCTTATGTT+TGG - tig0000496:72428-72447 Msa1335550:intron 30.0%
! GTGTCAATTTCATCACATTT+TGG + tig0000496:72743-72762 None:intergenic 30.0%
AAATGAGAATATTGCGCAAA+TGG + tig0000496:72819-72838 None:intergenic 30.0%
TCGAATATAAGCAAGTTTAG+TGG + tig0000496:73040-73059 None:intergenic 30.0%
! AACTTGCTTATATTCGAAAC+TGG - tig0000496:73043-73062 Msa1335550:intron 30.0%
ATGGAAACATAGAATAGATG+AGG - tig0000496:73098-73117 Msa1335550:intron 30.0%
TGGAAACATAGAATAGATGA+GGG - tig0000496:73099-73118 Msa1335550:intron 30.0%
AGTAGATTAATAGAGGACAT+TGG - tig0000496:73443-73462 Msa1335550:intron 30.0%
! GACATCTTTATTCTTTTCAG+TGG + tig0000496:73644-73663 None:intergenic 30.0%
GAAAAATCAGAAAACTGAAC+AGG + tig0000496:73743-73762 None:intergenic 30.0%
GTGGGAAAAAGAAATGTATA+AGG - tig0000496:73818-73837 Msa1335550:intron 30.0%
!! CCCTCTATTTAACTTTTATC+TGG + tig0000496:73955-73974 None:intergenic 30.0%
TCGTACTTACTTATCTCTTA+TGG - tig0000496:74077-74096 Msa1335550:intron 30.0%
!! ATAAAGGTATCACTCAAAGA+AGG + tig0000496:74219-74238 None:intergenic 30.0%
AGTACATTAAGCAAACACAA+GGG - tig0000496:74404-74423 Msa1335550:intron 30.0%
TTCCACTTCAGAGAAAATAT+GGG + tig0000496:74431-74450 None:intergenic 30.0%
ATTCCACTTCAGAGAAAATA+TGG + tig0000496:74432-74451 None:intergenic 30.0%
AAAGGAGATTATCTTCTTAC+TGG - tig0000496:74455-74474 Msa1335550:intron 30.0%
!! CAACAATTTGATTTTCACAG+CGG - tig0000496:74530-74549 Msa1335550:intron 30.0%
AATCTTGCAAACATGTATCA+TGG + tig0000496:74732-74751 None:intergenic 30.0%
ATGATACATGTTTGCAAGAT+TGG - tig0000496:74731-74750 Msa1335550:intron 30.0%
ACAAGTTATGTGTATAAACC+TGG + tig0000496:74790-74809 None:intergenic 30.0%
TGAATTATTATTCTGTGCAC+TGG - tig0000496:74812-74831 Msa1335550:intron 30.0%
GCTGAGTTAACTATTCAAAT+TGG - tig0000496:74914-74933 Msa1335550:intron 30.0%
GAGTTAACTATTCAAATTGG+TGG - tig0000496:74917-74936 Msa1335550:intron 30.0%
TTCTAATGTATCTGACTACT+TGG - tig0000496:74978-74997 Msa1335550:intron 30.0%
TCTAATGTATCTGACTACTT+GGG - tig0000496:74979-74998 Msa1335550:intron 30.0%
! GAACCAATAAACTAGTTTAG+TGG + tig0000496:75093-75112 None:intergenic 30.0%
! TGTTTCTCGTTTTGTAGATA+TGG - tig0000496:75408-75427 Msa1335550:intron 30.0%
! TTTTGAACTATACAGGTTGT+TGG - tig0000496:75503-75522 Msa1335550:intron 30.0%
TTTGAACTATACAGGTTGTT+GGG - tig0000496:75504-75523 Msa1335550:intron 30.0%
TTATTAGGGTTATTTGTAGC+AGG + tig0000496:75590-75609 None:intergenic 30.0%
CCAACACCAATTTCTTATTA+GGG + tig0000496:75604-75623 None:intergenic 30.0%
AAATAGTTTCTCAAAGTGTG+CGG + tig0000496:75901-75920 None:intergenic 30.0%
AAAATAGAATTTGTGGGTGA+TGG - tig0000496:75948-75967 Msa1335550:intron 30.0%
AAATAGAATTTGTGGGTGAT+GGG - tig0000496:75949-75968 Msa1335550:intron 30.0%
TGTTCGTAATTTCTTCTTTG+GGG + tig0000496:76002-76021 None:intergenic 30.0%
GTGTTCGTAATTTCTTCTTT+GGG + tig0000496:76003-76022 None:intergenic 30.0%
TGTGTTCGTAATTTCTTCTT+TGG + tig0000496:76004-76023 None:intergenic 30.0%
TGACAGCTTAAAAACATTTG+GGG + tig0000496:76045-76064 None:intergenic 30.0%
TACAATATGATTATCAACCC+CGG - tig0000496:76094-76113 Msa1335550:CDS 30.0%
!! TTTAGTTTGATTATGGTGAC+CGG - tig0000496:76222-76241 Msa1335550:CDS 30.0%
TACTAGCTAATGTGTGATAT+TGG - tig0000496:76310-76329 Msa1335550:CDS 30.0%
! CAAGGTTTAAAACAATGTAG+TGG + tig0000496:76445-76464 None:intergenic 30.0%
!! ATATTTTGAACAGTGAGTAG+TGG + tig0000496:76470-76489 None:intergenic 30.0%
! GAATTTTGTAGAATGTGATG+AGG + tig0000496:76524-76543 None:intergenic 30.0%
ATATCAGTGGCAAGAATATA+TGG - tig0000496:76900-76919 Msa1335550:intron 30.0%
ATTATAGTTTATCTGGTGTC+TGG - tig0000496:77032-77051 Msa1335550:intron 30.0%
!!! TTGGTTTTGACTGGTTTATT+TGG - tig0000496:77101-77120 Msa1335550:intron 30.0%
AATATATGGTCCTTGAATGA+TGG - tig0000496:77205-77224 Msa1335550:intron 30.0%
ATTAAAACATACAACGGCAA+TGG - tig0000496:77235-77254 Msa1335550:intron 30.0%
! TAACAATACAGTTTGCGTTT+TGG - tig0000496:77315-77334 Msa1335550:CDS 30.0%
ATACAGTTCTGTCAATATCA+TGG + tig0000496:77413-77432 None:intergenic 30.0%
! CATGATAACGATTATACAGA+CGG + tig0000496:77584-77603 None:intergenic 30.0%
TATATAATTCCCGGATGAAG+AGG + tig0000496:68947-68966 None:intergenic 35.0%
TCTTCATCCGGGAATTATAT+AGG - tig0000496:68946-68965 Msa1335550:three_prime_UTR 35.0%
!!! TTTTTTGGTGTGAAGGGTTT+GGG + tig0000496:69083-69102 None:intergenic 35.0%
ATGACATACCTGATTCTTGA+AGG + tig0000496:69195-69214 None:intergenic 35.0%
TGGTTGACCGAAAAAGATTA+AGG + tig0000496:69268-69287 None:intergenic 35.0%
AAGTCTAAACCCTTGACATT+TGG + tig0000496:69288-69307 None:intergenic 35.0%
ATGTTGTTGCTACCGAATTA+GGG - tig0000496:69361-69380 Msa1335550:CDS 35.0%
TTTCGCAACTACGACATATA+AGG + tig0000496:69604-69623 None:intergenic 35.0%
! TGCGAAACTTTTACACGTTT+TGG - tig0000496:69617-69636 Msa1335550:intron 35.0%
! TGAATTGGTTTACATTGTGC+TGG - tig0000496:69810-69829 Msa1335550:intron 35.0%
!! ACACATTCTGCTTTTGTGTT+TGG - tig0000496:69852-69871 Msa1335550:intron 35.0%
!! CACATTCTGCTTTTGTGTTT+GGG - tig0000496:69853-69872 Msa1335550:intron 35.0%
ATTAACAAATGCCCCATTGA+TGG - tig0000496:69888-69907 Msa1335550:intron 35.0%
GTACCAAATTTCCATCAATG+GGG + tig0000496:69902-69921 None:intergenic 35.0%
GGTACCAAATTTCCATCAAT+GGG + tig0000496:69903-69922 None:intergenic 35.0%
TGGTACCAAATTTCCATCAA+TGG + tig0000496:69904-69923 None:intergenic 35.0%
!! CTTTTTAAGCTCTTCATACC+TGG - tig0000496:70060-70079 Msa1335550:intron 35.0%
CATTTATCAACATGAAACCC+AGG + tig0000496:70081-70100 None:intergenic 35.0%
AAAGAAGAAGAAAACGACAG+AGG - tig0000496:70204-70223 Msa1335550:intron 35.0%
AAGAAGAAGAAAACGACAGA+GGG - tig0000496:70205-70224 Msa1335550:intron 35.0%
! GAATCTGAAAAAGAGCATGA+TGG - tig0000496:70239-70258 Msa1335550:intron 35.0%
AGAAAAGGAAAGACAGGAAA+GGG - tig0000496:70280-70299 Msa1335550:intron 35.0%
ACGTGAAAAGGATAAAGAGA+AGG - tig0000496:70310-70329 Msa1335550:intron 35.0%
TTGTATGACATCGATACTTG+GGG + tig0000496:70671-70690 None:intergenic 35.0%
ATTGCTTCCTTGTAGTGATT+AGG - tig0000496:70782-70801 Msa1335550:intron 35.0%
ATTAGGCGATGAAGAGTAAT+GGG - tig0000496:70799-70818 Msa1335550:intron 35.0%
ACTAGCTGTTCATATCATCA+GGG + tig0000496:70838-70857 None:intergenic 35.0%
TACTAGCTGTTCATATCATC+AGG + tig0000496:70839-70858 None:intergenic 35.0%
TCGAATGAGTAGTTTACTAC+TGG - tig0000496:70989-71008 Msa1335550:intron 35.0%
GATGTTGTACATATGTCCAT+GGG + tig0000496:71297-71316 None:intergenic 35.0%
TGATGTTGTACATATGTCCA+TGG + tig0000496:71298-71317 None:intergenic 35.0%
TCTGACTTAGGAAATTCACA+TGG + tig0000496:71330-71349 None:intergenic 35.0%
! TCAGATGTGACAATTTTGGA+AGG - tig0000496:71345-71364 Msa1335550:intron 35.0%
!! CAGATGTGACAATTTTGGAA+GGG - tig0000496:71346-71365 Msa1335550:intron 35.0%
ATTTATAAGTTCGTATCCGC+AGG - tig0000496:71677-71696 Msa1335550:intron 35.0%
TTTATAAGTTCGTATCCGCA+GGG - tig0000496:71678-71697 Msa1335550:intron 35.0%
!!! GTAAATTATTTTAGTGCCCG+AGG - tig0000496:71746-71765 Msa1335550:CDS 35.0%
ATCATCTATGTTCCCCTAAT+TGG - tig0000496:71859-71878 Msa1335550:intron 35.0%
TAGGTGCAGTATACCAATTA+GGG + tig0000496:71875-71894 None:intergenic 35.0%
ATAGGTGCAGTATACCAATT+AGG + tig0000496:71876-71895 None:intergenic 35.0%
GGTGGTCTAATAATCTTTGA+AGG - tig0000496:71997-72016 Msa1335550:CDS 35.0%
!! AAACATGGTTAGTCTAGGAA+TGG + tig0000496:72062-72081 None:intergenic 35.0%
AATAGAGTTTCACAGCAACA+TGG - tig0000496:72225-72244 Msa1335550:intron 35.0%
ACAGCAACATGGTTCAATTA+GGG - tig0000496:72236-72255 Msa1335550:intron 35.0%
GAAGTCAGTTCCAAACATAA+GGG + tig0000496:72441-72460 None:intergenic 35.0%
TGAAGTCAGTTCCAAACATA+AGG + tig0000496:72442-72461 None:intergenic 35.0%
! GAACTGACTTCAGCTTAAAT+AGG - tig0000496:72450-72469 Msa1335550:intron 35.0%
!!! TTTTTGAAGCAGTGAAATCG+TGG + tig0000496:72522-72541 None:intergenic 35.0%
! TGAGTCTTTTTAGACAGACT+GGG + tig0000496:72641-72660 None:intergenic 35.0%
! TTGAGTCTTTTTAGACAGAC+TGG + tig0000496:72642-72661 None:intergenic 35.0%
GCGCAAATGGAAATGTAAAA+TGG + tig0000496:72806-72825 None:intergenic 35.0%
TTGCTTATATTCGAAACTGG+AGG - tig0000496:73046-73065 Msa1335550:intron 35.0%
!! ATCATCTGAACTTTTAGGTC+TGG - tig0000496:73514-73533 Msa1335550:intron 35.0%
!! TCATCTGAACTTTTAGGTCT+GGG - tig0000496:73515-73534 Msa1335550:intron 35.0%
AAGATGTCACTACACTTGAT+TGG - tig0000496:73656-73675 Msa1335550:intron 35.0%
TGATTGGAATGTGAGTTTGA+TGG - tig0000496:73672-73691 Msa1335550:intron 35.0%
! GATTACTGATAGTGACTTCA+AGG - tig0000496:73716-73735 Msa1335550:intron 35.0%
CGGGTGAGAAAAAATAGAAA+CGG + tig0000496:73770-73789 None:intergenic 35.0%
TTGTTCTTATTAGGGAGGTT+TGG - tig0000496:73847-73866 Msa1335550:intron 35.0%
TGTTCTTATTAGGGAGGTTT+GGG - tig0000496:73848-73867 Msa1335550:intron 35.0%
!!! GGGTAGGTTTTGAAAATAGA+AGG - tig0000496:73868-73887 Msa1335550:intron 35.0%
AGAAGGAAAGACAGAAGAAA+GGG + tig0000496:74202-74221 None:intergenic 35.0%
AAGAAGGAAAGACAGAAGAA+AGG + tig0000496:74203-74222 None:intergenic 35.0%
! AATGTACTCTTTAGTTCACC+TGG + tig0000496:74392-74411 None:intergenic 35.0%
GAGTACATTAAGCAAACACA+AGG - tig0000496:74403-74422 Msa1335550:intron 35.0%
!! TCTCTGAAGTGGAATAAGAA+AGG - tig0000496:74437-74456 Msa1335550:intron 35.0%
TTCTTACTGGAAGTTTCGAT+GGG - tig0000496:74468-74487 Msa1335550:intron 35.0%
!! AACATGTATCATGGTGTCAT+TGG + tig0000496:74723-74742 None:intergenic 35.0%
! AACCCAGTAAAAACTTTTGC+CGG - tig0000496:74761-74780 Msa1335550:intron 35.0%
! TTCAAATTGGTGGATAACCT+TGG - tig0000496:74927-74946 Msa1335550:intron 35.0%
! TCAAATTGGTGGATAACCTT+GGG - tig0000496:74928-74947 Msa1335550:intron 35.0%
!! TTCACTCTGAAATACCAGAA+AGG + tig0000496:75186-75205 None:intergenic 35.0%
ATATTCCCTAATTGGTACCT+TGG + tig0000496:75477-75496 None:intergenic 35.0%
AGGAGATATATGCTATCAGA+TGG - tig0000496:75552-75571 Msa1335550:intron 35.0%
CCCTAATAAGAAATTGGTGT+TGG - tig0000496:75601-75620 Msa1335550:intron 35.0%
GCCAACACCAATTTCTTATT+AGG + tig0000496:75605-75624 None:intergenic 35.0%
!! ATAAGAAATTGGTGTTGGCT+AGG - tig0000496:75606-75625 Msa1335550:intron 35.0%
GACGAGGAAAACAGATTATA+GGG + tig0000496:75712-75731 None:intergenic 35.0%
TGACGAGGAAAACAGATTAT+AGG + tig0000496:75713-75732 None:intergenic 35.0%
TTAAAAACATTTGGGGGAAG+GGG + tig0000496:76038-76057 None:intergenic 35.0%
CTTAAAAACATTTGGGGGAA+GGG + tig0000496:76039-76058 None:intergenic 35.0%
GACAGCTTAAAAACATTTGG+GGG + tig0000496:76044-76063 None:intergenic 35.0%
ATTTATAGTTGTTGGGCTCT+GGG + tig0000496:76075-76094 None:intergenic 35.0%
TATTTATAGTTGTTGGGCTC+TGG + tig0000496:76076-76095 None:intergenic 35.0%
TACATGCTGTATATTCAGTG+CGG - tig0000496:76152-76171 Msa1335550:CDS 35.0%
TTATTAACAAGCAGGATGCT+GGG + tig0000496:76954-76973 None:intergenic 35.0%
! TGTTTTCTTGGCAACATTTC+AGG - tig0000496:77056-77075 Msa1335550:intron 35.0%
CCAGTCAAAACCAAAAGAAT+TGG + tig0000496:77095-77114 None:intergenic 35.0%
!!! CCAATTCTTTTGGTTTTGAC+TGG - tig0000496:77092-77111 Msa1335550:intron 35.0%
!! ACTGGTTTATTTGGTTCTAC+AGG - tig0000496:77110-77129 Msa1335550:intron 35.0%
!! CTGGTTTATTTGGTTCTACA+GGG - tig0000496:77111-77130 Msa1335550:intron 35.0%
AATGATCTTGCCATCATTCA+AGG + tig0000496:77218-77237 None:intergenic 35.0%
!!! GACAGAACTGTATTTTGGTT+CGG - tig0000496:77420-77439 Msa1335550:five_prime_UTR 35.0%
TTACAACGGAGTTACAAGAA+TGG + tig0000496:77490-77509 None:intergenic 35.0%
GTAACTCCGTTGTAAGTTTA+TGG - tig0000496:77495-77514 Msa1335550:five_prime_UTR 35.0%
TCGTTATCATGTTGCATTCT+CGG - tig0000496:77593-77612 Msa1335550:five_prime_UTR 35.0%
GGCAAGTCCTATATAATTCC+CGG + tig0000496:68956-68975 None:intergenic 40.0%
!! TTTTTGGTGTGAAGGGTTTG+GGG + tig0000496:69082-69101 None:intergenic 40.0%
!!! CTTTTTTGGTGTGAAGGGTT+TGG + tig0000496:69084-69103 None:intergenic 40.0%
GACGAGATAATTGAGTTCGA+CGG + tig0000496:69164-69183 None:intergenic 40.0%
TTTCGCTACCTTCAAGAATC+AGG - tig0000496:69184-69203 Msa1335550:CDS 40.0%
TTTCGGTCAACCAAATGTCA+AGG - tig0000496:69275-69294 Msa1335550:CDS 40.0%
TTCGGTCAACCAAATGTCAA+GGG - tig0000496:69276-69295 Msa1335550:CDS 40.0%
AGCAACAACATCATAACCGT+TGG + tig0000496:69352-69371 None:intergenic 40.0%
GATGTTGTTGCTACCGAATT+AGG - tig0000496:69360-69379 Msa1335550:CDS 40.0%
GCAGTGACTAAACCCTAATT+CGG + tig0000496:69376-69395 None:intergenic 40.0%
TGCTTTGCACGTTCATGTTA+TGG + tig0000496:69788-69807 None:intergenic 40.0%
AACGTGCAAAGCAACTGAAT+TGG - tig0000496:69795-69814 Msa1335550:intron 40.0%
!!! TGTGCTGGTTTTATGACTGT+AGG - tig0000496:69825-69844 Msa1335550:intron 40.0%
! TGCTTTTGTGTTTGGGAATG+AGG - tig0000496:69860-69879 Msa1335550:intron 40.0%
! GCTTTTGTGTTTGGGAATGA+GGG - tig0000496:69861-69880 Msa1335550:intron 40.0%
ATGCCCCATTGATGGAAATT+TGG - tig0000496:69896-69915 Msa1335550:intron 40.0%
TGATGGAAATTTGGTACCAC+CGG - tig0000496:69905-69924 Msa1335550:intron 40.0%
AGAAGAAGAAAACGACAGAG+GGG - tig0000496:70206-70225 Msa1335550:intron 40.0%
ACGACAGAGGGGTAAAAATA+AGG - tig0000496:70217-70236 Msa1335550:intron 40.0%
GACAAGAGAAAAGGAAAGAC+AGG - tig0000496:70274-70293 Msa1335550:intron 40.0%
GAGAAAAGGAAAGACAGGAA+AGG - tig0000496:70279-70298 Msa1335550:intron 40.0%
AAGGGAGAAAGAACGTGAAA+AGG - tig0000496:70298-70317 Msa1335550:intron 40.0%
GGTCTCAGATCAAGAAGATA+AGG - tig0000496:70388-70407 Msa1335550:intron 40.0%
GGTTAATGTAAAGCTTGAGG+AGG - tig0000496:70520-70539 Msa1335550:intron 40.0%
AATGTAAAGCTTGAGGAGGA+TGG - tig0000496:70524-70543 Msa1335550:intron 40.0%
AACCACCTGTTCAACTGATT+TGG - tig0000496:70560-70579 Msa1335550:intron 40.0%
AACCAAATCAGTTGAACAGG+TGG + tig0000496:70565-70584 None:intergenic 40.0%
AGTGTTCTCTGTTGCATGAT+TGG - tig0000496:70602-70621 Msa1335550:intron 40.0%
TTCATCGCCTAATCACTACA+AGG + tig0000496:70792-70811 None:intergenic 40.0%
GATTAGGCGATGAAGAGTAA+TGG - tig0000496:70798-70817 Msa1335550:intron 40.0%
CTAGCTGTTCATATCATCAG+GGG + tig0000496:70837-70856 None:intergenic 40.0%
AAAGTATGGTTGGAAGGAGA+TGG + tig0000496:70899-70918 None:intergenic 40.0%
TACTCATTCGAAATTCGCCA+GGG + tig0000496:70980-70999 None:intergenic 40.0%
ATTCCCACATAGAGCAAGTA+GGG + tig0000496:71181-71200 None:intergenic 40.0%
TATTCCCACATAGAGCAAGT+AGG + tig0000496:71182-71201 None:intergenic 40.0%
TGCAATCAAAACTACTGCCT+CGG + tig0000496:71766-71785 None:intergenic 40.0%
AGGTGCAGTATACCAATTAG+GGG + tig0000496:71874-71893 None:intergenic 40.0%
CCTAACTCAAGGGATTGATT+AGG + tig0000496:71943-71962 None:intergenic 40.0%
CCTAATCAATCCCTTGAGTT+AGG - tig0000496:71940-71959 Msa1335550:intron 40.0%
TTAGACCACCTAAGGGATTA+GGG + tig0000496:71987-72006 None:intergenic 40.0%
ATTAGACCACCTAAGGGATT+AGG + tig0000496:71988-72007 None:intergenic 40.0%
TAGGTCTAAGTCGAAAGCTA+TGG - tig0000496:72098-72117 Msa1335550:CDS 40.0%
CACAGCAACATGGTTCAATT+AGG - tig0000496:72235-72254 Msa1335550:intron 40.0%
TCAGCTTAAATAGGCAAGTC+TGG - tig0000496:72459-72478 Msa1335550:intron 40.0%
GAAAATTGCGGTACGATTTC+TGG - tig0000496:72579-72598 Msa1335550:intron 40.0%
GGTGTGAAAAGCAGAAAATC+TGG + tig0000496:72618-72637 None:intergenic 40.0%
! AGTCTTTTTAGACAGACTGG+GGG + tig0000496:72639-72658 None:intergenic 40.0%
! GAGTCTTTTTAGACAGACTG+GGG + tig0000496:72640-72659 None:intergenic 40.0%
ATAGAATAGATGAGGGCAAG+TGG - tig0000496:73106-73125 Msa1335550:intron 40.0%
!! CATCTGAACTTTTAGGTCTG+GGG - tig0000496:73516-73535 Msa1335550:intron 40.0%
TCTGCTCAAGAAAGCTTCAA+CGG + tig0000496:73790-73809 None:intergenic 40.0%
! TCTTGAGCAGAGCAATTTTG+TGG - tig0000496:73799-73818 Msa1335550:intron 40.0%
! CTTGAGCAGAGCAATTTTGT+GGG - tig0000496:73800-73819 Msa1335550:intron 40.0%
TGCTTGACCATCATAAGAAC+CGG + tig0000496:74155-74174 None:intergenic 40.0%
ATGATGGTCAAGCACGAATT+TGG - tig0000496:74161-74180 Msa1335550:intron 40.0%
! GTCTGGTTTAGTTGCATTTG+TGG - tig0000496:74255-74274 Msa1335550:intron 40.0%
!! GACCCATATTTTCTCTGAAG+TGG - tig0000496:74426-74445 Msa1335550:intron 40.0%
CTTCTTACTGGAAGTTTCGA+TGG - tig0000496:74467-74486 Msa1335550:intron 40.0%
! ACCCAGTAAAAACTTTTGCC+GGG - tig0000496:74762-74781 Msa1335550:intron 40.0%
! ATGCCGTGCTTATACCTTTT+TGG - tig0000496:74842-74861 Msa1335550:intron 40.0%
! TGCCGTGCTTATACCTTTTT+GGG - tig0000496:74843-74862 Msa1335550:intron 40.0%
! CTCCCAAAAAGGTATAAGCA+CGG + tig0000496:74848-74867 None:intergenic 40.0%
!! GTGCTTATACCTTTTTGGGA+GGG - tig0000496:74847-74866 Msa1335550:intron 40.0%
! GATAGTTTTCCCTCCCAAAA+AGG + tig0000496:74859-74878 None:intergenic 40.0%
!! ATCTAGAAAGCATCATCCCA+AGG + tig0000496:74947-74966 None:intergenic 40.0%
TTTCGAATTCACCAGCAGTA+TGG - tig0000496:75012-75031 Msa1335550:CDS 40.0%
TTCGAATTCACCAGCAGTAT+GGG - tig0000496:75013-75032 Msa1335550:CDS 40.0%
TTCAGACGATAACACTGCAA+AGG - tig0000496:75253-75272 Msa1335550:intron 40.0%
!!! TGATTTTAGGGAGCATTCCA+AGG - tig0000496:75457-75476 Msa1335550:intron 40.0%
! AGCATTCCAAGGTACCAATT+AGG - tig0000496:75468-75487 Msa1335550:intron 40.0%
! GCATTCCAAGGTACCAATTA+GGG - tig0000496:75469-75488 Msa1335550:intron 40.0%
TATTTGTAGCAGGACCAGTT+GGG + tig0000496:75580-75599 None:intergenic 40.0%
TTATTTGTAGCAGGACCAGT+TGG + tig0000496:75581-75600 None:intergenic 40.0%
!! ATGCTCTTCATTGACTTGCA+TGG - tig0000496:75650-75669 Msa1335550:intron 40.0%
CAGTTAGCAACCTAAGATTC+AGG + tig0000496:75736-75755 None:intergenic 40.0%
!! TAGTGCTCTAAGGGAGTATT+TGG - tig0000496:75783-75802 Msa1335550:intron 40.0%
! TCGTAATTTCTTCTTTGGGG+AGG + tig0000496:75999-76018 None:intergenic 40.0%
TAAAAACATTTGGGGGAAGG+GGG + tig0000496:76037-76056 None:intergenic 40.0%
GCTTAAAAACATTTGGGGGA+AGG + tig0000496:76040-76059 None:intergenic 40.0%
AAGACAACAAGCATAGTTGC+AGG + tig0000496:76257-76276 None:intergenic 40.0%
TTTGTAGAATGTGATGAGGG+AGG + tig0000496:76520-76539 None:intergenic 40.0%
TTGACTCTACCGTAAAGCTA+TGG - tig0000496:76806-76825 Msa1335550:intron 40.0%
TGACTCTACCGTAAAGCTAT+GGG - tig0000496:76807-76826 Msa1335550:intron 40.0%
! TTCCACATCCCATAGCTTTA+CGG + tig0000496:76818-76837 None:intergenic 40.0%
TTCATAGCTTGAATGGACAC+AGG - tig0000496:76851-76870 Msa1335550:intron 40.0%
CAGTGGCAAGAATATATGGA+TGG - tig0000496:76904-76923 Msa1335550:intron 40.0%
CTTATTAACAAGCAGGATGC+TGG + tig0000496:76955-76974 None:intergenic 40.0%
! GCATCCTGCTTGTTAATAAG+CGG - tig0000496:76955-76974 Msa1335550:intron 40.0%
TTGACCGCTTATTAACAAGC+AGG + tig0000496:76962-76981 None:intergenic 40.0%
!!! GTAGTTGGTGCCAATTCTTT+TGG - tig0000496:77082-77101 Msa1335550:intron 40.0%
TGGCTAAATACTCACCATTG+GGG + tig0000496:77162-77181 None:intergenic 40.0%
CTGGCTAAATACTCACCATT+GGG + tig0000496:77163-77182 None:intergenic 40.0%
ACTGGCTAAATACTCACCAT+TGG + tig0000496:77164-77183 None:intergenic 40.0%
AATGGTGAGTATTTAGCCAG+TGG - tig0000496:77163-77182 Msa1335550:intron 40.0%
ATGGTGAGTATTTAGCCAGT+GGG - tig0000496:77164-77183 Msa1335550:intron 40.0%
AAAACATACAACGGCAATGG+AGG - tig0000496:77238-77257 Msa1335550:intron 40.0%
!!! GAGGTATTTTTGAGGTCTGT+TGG - tig0000496:77257-77276 Msa1335550:intron 40.0%
!!! TTTTGAGGTCTGTTGGAACA+AGG - tig0000496:77264-77283 Msa1335550:intron 40.0%
TTGAGCAACTAGCCAAAGTA+AGG + tig0000496:77372-77391 None:intergenic 40.0%
AAATGCTAACAAGTGCACCT+GGG + tig0000496:77452-77471 None:intergenic 40.0%
AAAATGCTAACAAGTGCACC+TGG + tig0000496:77453-77472 None:intergenic 40.0%
TGGGAAAAAAGGGCAGTAAG+CGG + tig0000496:68977-68996 None:intergenic 45.0%
AAGACACGGGTGGGAAAAAA+GGG + tig0000496:68987-69006 None:intergenic 45.0%
GAGATAATTGAGTTCGACGG+AGG + tig0000496:69161-69180 None:intergenic 45.0%
TCGGCAGCAAACAACGTAAA+AGG + tig0000496:69570-69589 None:intergenic 45.0%
! TGTTATGGTTTTCCCCTCCT+AGG - tig0000496:69711-69730 Msa1335550:intron 45.0%
! ATGCAGGAGCTTTAGTGCAT+CGG - tig0000496:69743-69762 Msa1335550:intron 45.0%
TTTGTGTTTGGGAATGAGGG+TGG - tig0000496:69864-69883 Msa1335550:intron 45.0%
GATGGAAATTTGGTACCACC+GGG - tig0000496:69906-69925 Msa1335550:intron 45.0%
ATGGAAATTTGGTACCACCG+GGG - tig0000496:69907-69926 Msa1335550:intron 45.0%
ACAAATGTAACAAGAGCCCC+CGG + tig0000496:69927-69946 None:intergenic 45.0%
TCAGAAGGGACTACAGTTCT+TGG - tig0000496:69947-69966 Msa1335550:intron 45.0%
GAAGTCTGCATCACACTGAT+AGG + tig0000496:70108-70127 None:intergenic 45.0%
! TGTTATCTTGTTTGCTGCCC+TGG - tig0000496:70960-70979 Msa1335550:intron 45.0%
CTACTCATTCGAAATTCGCC+AGG + tig0000496:70981-71000 None:intergenic 45.0%
CATAGAGCAAGTAGGGACAT+GGG + tig0000496:71174-71193 None:intergenic 45.0%
ACATAGAGCAAGTAGGGACA+TGG + tig0000496:71175-71194 None:intergenic 45.0%
ATGTCCCTACTTGCTCTATG+TGG - tig0000496:71174-71193 Msa1335550:intron 45.0%
TGTCCCTACTTGCTCTATGT+GGG - tig0000496:71175-71194 Msa1335550:intron 45.0%
! TTTGGAAGGGCATAAGTCAG+AGG - tig0000496:71359-71378 Msa1335550:intron 45.0%
AGCCTGTTTACCATCCACTT+AGG - tig0000496:71446-71465 Msa1335550:intron 45.0%
GACCTAAGTGGATGGTAAAC+AGG + tig0000496:71451-71470 None:intergenic 45.0%
GATGCAAGAAAGGATCCTGT+AGG + tig0000496:71492-71511 None:intergenic 45.0%
ACAGGATCCTTTCTTGCATC+AGG - tig0000496:71492-71511 Msa1335550:intron 45.0%
CAGGATCCTTTCTTGCATCA+GGG - tig0000496:71493-71512 Msa1335550:intron 45.0%
ATCCTTTCTTGCATCAGGGT+TGG - tig0000496:71497-71516 Msa1335550:intron 45.0%
TACCAACCCTGATGCAAGAA+AGG + tig0000496:71502-71521 None:intergenic 45.0%
AAGTCTATCACTGTGCACGT+GGG + tig0000496:71623-71642 None:intergenic 45.0%
AAAGTCTATCACTGTGCACG+TGG + tig0000496:71624-71643 None:intergenic 45.0%
TGAGATTAACACAGTCCCTG+CGG + tig0000496:71696-71715 None:intergenic 45.0%
GCAATCAAAACTACTGCCTC+GGG + tig0000496:71765-71784 None:intergenic 45.0%
AGAAGAGGGTCCTAACTCAA+GGG + tig0000496:71953-71972 None:intergenic 45.0%
TAGACCACCTAAGGGATTAG+GGG + tig0000496:71986-72005 None:intergenic 45.0%
CGCTACGGTTGTGAAAATTG+CGG - tig0000496:72567-72586 Msa1335550:intron 45.0%
! AGCAGAAAATCTGGAAGTGC+TGG + tig0000496:72609-72628 None:intergenic 45.0%
! AAGGGCGTGTAGAATCAGAA+AGG + tig0000496:73391-73410 None:intergenic 45.0%
GGGATTCAACAGCTCGTATT+TGG - tig0000496:73536-73555 Msa1335550:intron 45.0%
CTGCTCAAGAAAGCTTCAAC+GGG + tig0000496:73789-73808 None:intergenic 45.0%
CTTATTAGGGAGGTTTGGGT+AGG - tig0000496:73852-73871 Msa1335550:intron 45.0%
CTTATGGAGAGCTTGACCTT+TGG - tig0000496:74093-74112 Msa1335550:intron 45.0%
! ACCTTTGGTTGCTGTTGTAC+AGG - tig0000496:74108-74127 Msa1335550:intron 45.0%
! CCTTTGGTTGCTGTTGTACA+GGG - tig0000496:74109-74128 Msa1335550:intron 45.0%
! CTTTGGTTGCTGTTGTACAG+GGG - tig0000496:74110-74129 Msa1335550:intron 45.0%
! TTTGGTTGCTGTTGTACAGG+GGG - tig0000496:74111-74130 Msa1335550:intron 45.0%
! CTTGCAACCGGTTCTTATGA+TGG - tig0000496:74145-74164 Msa1335550:intron 45.0%
GAATTTGGACCGCTAATGGT+AGG - tig0000496:74176-74195 Msa1335550:intron 45.0%
AAGAAAGGGCCTACCATTAG+CGG + tig0000496:74188-74207 None:intergenic 45.0%
TCGATGGGTCTGCAATTGTA+TGG - tig0000496:74483-74502 Msa1335550:intron 45.0%
CGATGGGTCTGCAATTGTAT+GGG - tig0000496:74484-74503 Msa1335550:intron 45.0%
GTTCAACACTCGACGTTGAT+TGG - tig0000496:74669-74688 Msa1335550:intron 45.0%
! GCCCGGCAAAAGTTTTTACT+GGG + tig0000496:74766-74785 None:intergenic 45.0%
! TGCCCGGCAAAAGTTTTTAC+TGG + tig0000496:74767-74786 None:intergenic 45.0%
ATGTGTATAAACCTGGTGCC+CGG + tig0000496:74783-74802 None:intergenic 45.0%
!! CGTGCTTATACCTTTTTGGG+AGG - tig0000496:74846-74865 Msa1335550:intron 45.0%
CAGCAGTATGGGACTTCATT+GGG - tig0000496:75024-75043 Msa1335550:CDS 45.0%
AGCAGTATGGGACTTCATTG+GGG - tig0000496:75025-75044 Msa1335550:CDS 45.0%
CTGTCTGATAGCAACCTTTC+TGG - tig0000496:75169-75188 Msa1335550:CDS 45.0%
TGTATCAAATGGGATCCCAC+AGG - tig0000496:75212-75231 Msa1335550:CDS 45.0%
AGTGTTATCGTCTGAACACG+AGG + tig0000496:75249-75268 None:intergenic 45.0%
TTCCTCGTCACCTGAATCTT+AGG - tig0000496:75723-75742 Msa1335550:intron 45.0%
AACCTAAGATTCAGGTGACG+AGG + tig0000496:75728-75747 None:intergenic 45.0%
AAAAACATTTGGGGGAAGGG+GGG + tig0000496:76036-76055 None:intergenic 45.0%
TGATTATCAACCCCGGTTGT+AGG - tig0000496:76101-76120 Msa1335550:CDS 45.0%
GATTATCAACCCCGGTTGTA+GGG - tig0000496:76102-76121 Msa1335550:CDS 45.0%
ATTATCAACCCCGGTTGTAG+GGG - tig0000496:76103-76122 Msa1335550:CDS 45.0%
TAGTTGCAGGTGCAGATATC+CGG + tig0000496:76244-76263 None:intergenic 45.0%
! GAACAGTGAGTAGTGGAACA+AGG + tig0000496:76463-76482 None:intergenic 45.0%
CAACTGATGCACTGTACAGA+AGG + tig0000496:76789-76808 None:intergenic 45.0%
TACCGTAAAGCTATGGGATG+TGG - tig0000496:76813-76832 Msa1335550:intron 45.0%
AAGCTATGGGATGTGGAACT+CGG - tig0000496:76820-76839 Msa1335550:intron 45.0%
!! CTGGTGTCTGGTTGTTTTCT+TGG - tig0000496:77044-77063 Msa1335550:intron 45.0%
TTCTTGGCAACATTTCAGGC+TGG - tig0000496:77060-77079 Msa1335550:intron 45.0%
CAACATTTCAGGCTGGTAGT+TGG - tig0000496:77067-77086 Msa1335550:intron 45.0%
ACTATTGCATTCAGCCCCAA+TGG - tig0000496:77145-77164 Msa1335550:intron 45.0%
!!! CGGCAATGGAGGTATTTTTG+AGG - tig0000496:77249-77268 Msa1335550:intron 45.0%
AAAGTAAGGTGGCTCTTCTC+AGG + tig0000496:77358-77377 None:intergenic 45.0%
TGAGAAGAGCCACCTTACTT+TGG - tig0000496:77357-77376 Msa1335550:exon 45.0%
AGCAACTAGCCAAAGTAAGG+TGG + tig0000496:77369-77388 None:intergenic 45.0%
AATGCTAACAAGTGCACCTG+GGG + tig0000496:77451-77470 None:intergenic 45.0%
!!! TGTATATTATAAATTTTATA+AGG + tig0000496:70759-70778 None:intergenic 5.0%
!! AAAAAATAAATAAATTTGAA+AGG - tig0000496:72951-72970 Msa1335550:CDS 5.0%
!!! TAAAAAAACATTAAAATTTT+TGG + tig0000496:74008-74027 None:intergenic 5.0%
!!! TTAATGTTTTTTTAAATTTA+TGG - tig0000496:74014-74033 Msa1335550:intron 5.0%
TAGTAGGCTAGGTGGTGTGT+AGG - tig0000496:68880-68899 Msa1335550:three_prime_UTR 50.0%
TCCCGGATGAAGAGGTTCAA+GGG + tig0000496:68939-68958 None:intergenic 50.0%
TTCCCGGATGAAGAGGTTCA+AGG + tig0000496:68940-68959 None:intergenic 50.0%
GAAGACACGGGTGGGAAAAA+AGG + tig0000496:68988-69007 None:intergenic 50.0%
! CTCGTTGAAGAGAACGGGTT+TGG + tig0000496:69124-69143 None:intergenic 50.0%
CCATGCTCGTTGAAGAGAAC+GGG + tig0000496:69129-69148 None:intergenic 50.0%
GCCATGCTCGTTGAAGAGAA+CGG + tig0000496:69130-69149 None:intergenic 50.0%
ATTGAGTTCGACGGAGGTGA+TGG + tig0000496:69155-69174 None:intergenic 50.0%
CTAAAGCTCCTGCATGTGCA+GGG + tig0000496:69738-69757 None:intergenic 50.0%
ACTAAAGCTCCTGCATGTGC+AGG + tig0000496:69739-69758 None:intergenic 50.0%
! TGCAGGAGCTTTAGTGCATC+GGG - tig0000496:69744-69763 Msa1335550:intron 50.0%
TCGGGCTGCCCTTTATAAGA+AGG - tig0000496:69762-69781 Msa1335550:intron 50.0%
TGGAAATTTGGTACCACCGG+GGG - tig0000496:69908-69927 Msa1335550:intron 50.0%
GGGACTACAGTTCTTGGAGA+TGG - tig0000496:69953-69972 Msa1335550:intron 50.0%
! AAAGAGCATGATGGTGACCG+CGG - tig0000496:70248-70267 Msa1335550:intron 50.0%
! CCTTTTCTCTTGTCAGACCG+CGG + tig0000496:70268-70287 None:intergenic 50.0%
! CTTGAGGAGGATGGAGCATT+TGG - tig0000496:70533-70552 Msa1335550:intron 50.0%
TTGTATAGGACCAGAGCCCA+TGG - tig0000496:71278-71297 Msa1335550:CDS 50.0%
GTACATATGTCCATGGGCTC+TGG + tig0000496:71291-71310 None:intergenic 50.0%
CAAGCACAGACCTAAGTGGA+TGG + tig0000496:71459-71478 None:intergenic 50.0%
TGCACAAGCACAGACCTAAG+TGG + tig0000496:71463-71482 None:intergenic 50.0%
CTTAGGTCTGTGCTTGTGCA+TGG - tig0000496:71463-71482 Msa1335550:intron 50.0%
CAGGAGAGAGAGATGAGATC+AGG - tig0000496:71828-71847 Msa1335550:CDS 50.0%
GAGAAGAGGGTCCTAACTCA+AGG + tig0000496:71954-71973 None:intergenic 50.0%
GGGGCTGTAGTTTGAGAAGA+GGG + tig0000496:71967-71986 None:intergenic 50.0%
AGGGGCTGTAGTTTGAGAAG+AGG + tig0000496:71968-71987 None:intergenic 50.0%
ACTACAGCCCCTAATCCCTT+AGG - tig0000496:71976-71995 Msa1335550:CDS 50.0%
TTGCACCCAAAATCGCGCTA+CGG - tig0000496:72482-72501 Msa1335550:intron 50.0%
! CACAACCGTAGCGCGATTTT+GGG + tig0000496:72490-72509 None:intergenic 50.0%
! TCACAACCGTAGCGCGATTT+TGG + tig0000496:72491-72510 None:intergenic 50.0%
! TCACAACCGTAGCGCGATTT+TGG + tig0000496:72491-72510 None:intergenic 50.0%
GCAACACCAACACAGTCGAA+GGG + tig0000496:73603-73622 None:intergenic 50.0%
TGCAACACCAACACAGTCGA+AGG + tig0000496:73604-73623 None:intergenic 50.0%
!! TGTTGGTGTTGCAGCACATC+AGG - tig0000496:73611-73630 Msa1335550:intron 50.0%
!! GTTGGTGTTGCAGCACATCA+GGG - tig0000496:73612-73631 Msa1335550:intron 50.0%
!! TTGGTGTTGCAGCACATCAG+GGG - tig0000496:73613-73632 Msa1335550:intron 50.0%
CCCTGTACAACAGCAACCAA+AGG + tig0000496:74112-74131 None:intergenic 50.0%
GCACGAATTTGGACCGCTAA+TGG - tig0000496:74172-74191 Msa1335550:intron 50.0%
! AAAAACTTTTGCCGGGCACC+AGG - tig0000496:74769-74788 Msa1335550:intron 50.0%
CCAATGAAGTCCCATACTGC+TGG + tig0000496:75026-75045 None:intergenic 50.0%
CCAGCAGTATGGGACTTCAT+TGG - tig0000496:75023-75042 Msa1335550:CDS 50.0%
GGATCCCACAGGTTCATTAC+TGG - tig0000496:75223-75242 Msa1335550:intron 50.0%
GAGGCCAGTAATGAACCTGT+GGG + tig0000496:75230-75249 None:intergenic 50.0%
GATGGGAATCAGAGTGTGGA+CGG - tig0000496:75966-75985 Msa1335550:CDS 50.0%
AGCTATGGGATGTGGAACTC+GGG - tig0000496:76821-76840 Msa1335550:intron 50.0%
TTAACAAGCAGGATGCTGGG+AGG + tig0000496:76951-76970 None:intergenic 50.0%
TGAGGTCTGTTGGAACAAGG+AGG - tig0000496:77267-77286 Msa1335550:intron 50.0%
GAGGTCTGTTGGAACAAGGA+GGG - tig0000496:77268-77287 Msa1335550:intron 50.0%
GGCCCTTGAACCTCTTCATC+CGG - tig0000496:68934-68953 Msa1335550:three_prime_UTR 55.0%
GCCCTTGAACCTCTTCATCC+GGG - tig0000496:68935-68954 Msa1335550:three_prime_UTR 55.0%
TGTCAACGCGGCAGAAGACA+CGG + tig0000496:69001-69020 None:intergenic 55.0%
GTGTGCTGTGTGTGTCAACG+CGG + tig0000496:69013-69032 None:intergenic 55.0%
CCCGTTCTCTTCAACGAGCA+TGG - tig0000496:69126-69145 Msa1335550:three_prime_UTR 55.0%
AATGTAACAAGAGCCCCCGG+TGG + tig0000496:69924-69943 None:intergenic 55.0%
CCGCGGTCTGACAAGAGAAA+AGG - tig0000496:70265-70284 Msa1335550:intron 55.0%
! GAGGAGGATGGAGCATTTGG+AGG - tig0000496:70536-70555 Msa1335550:intron 55.0%
GCTTGTGCATGGAGTCCTAC+AGG - tig0000496:71474-71493 Msa1335550:intron 55.0%
ACAGCCCCTAATCCCTTAGG+TGG - tig0000496:71979-71998 Msa1335550:CDS 55.0%
TGACACCCAGAAGACTGCAG+AGG + tig0000496:72388-72407 None:intergenic 55.0%
GCCAAGCCAAAATCGCGCTA+CGG - tig0000496:72552-72571 Msa1335550:intron 55.0%
!!! ACCGTAGCGCGATTTTGGCT+TGG + tig0000496:72556-72575 None:intergenic 55.0%
CACAGTCGAAGGGTCGTTCT+TGG + tig0000496:73593-73612 None:intergenic 55.0%
GAACGACCCTTCGACTGTGT+TGG - tig0000496:73594-73613 Msa1335550:intron 55.0%
! GTTGCTGTTGTACAGGGGGA+GGG - tig0000496:74115-74134 Msa1335550:intron 55.0%
! TTGCTGTTGTACAGGGGGAG+GGG - tig0000496:74116-74135 Msa1335550:intron 55.0%
GAGGGGACACTACTTGCAAC+CGG - tig0000496:74133-74152 Msa1335550:intron 55.0%
CGAGGCCAGTAATGAACCTG+TGG + tig0000496:75231-75250 None:intergenic 55.0%
GCTATCAGATGGAGCCCAAC+TGG - tig0000496:75563-75582 Msa1335550:intron 55.0%
!! GGGTGATGGGAATCAGAGTG+TGG - tig0000496:75962-75981 Msa1335550:CDS 55.0%
GGATTTGTCATGGGACCCAC+TGG + tig0000496:77182-77201 None:intergenic 55.0%
!!! TTTTGGTTCGGTAGTGCCCC+AGG - tig0000496:77432-77451 Msa1335550:five_prime_UTR 55.0%
TCTGCTGCCAGATAGCTCCA+AGG - tig0000496:77616-77635 Msa1335550:five_prime_UTR 55.0%
GTCAACGCGGCAGAAGACAC+GGG + tig0000496:69000-69019 None:intergenic 60.0%
CATGTGCAGGGTCCTAGGAG+GGG + tig0000496:69726-69745 None:intergenic 60.0%
GCATGTGCAGGGTCCTAGGA+GGG + tig0000496:69727-69746 None:intergenic 60.0%
TGCATGTGCAGGGTCCTAGG+AGG + tig0000496:69728-69747 None:intergenic 60.0%
TCCTAGGACCCTGCACATGC+AGG - tig0000496:69727-69746 Msa1335550:intron 60.0%
TCCTGCATGTGCAGGGTCCT+AGG + tig0000496:69731-69750 None:intergenic 60.0%
TCGCCTCCTCTGCAGTCTTC+TGG - tig0000496:72379-72398 Msa1335550:intron 60.0%
CGCCTCCTCTGCAGTCTTCT+GGG - tig0000496:72380-72399 Msa1335550:intron 60.0%
CACCCAGAAGACTGCAGAGG+AGG + tig0000496:72385-72404 None:intergenic 60.0%
! GGTTGCTGTTGTACAGGGGG+AGG - tig0000496:74114-74133 Msa1335550:intron 60.0%
GGGAATCAGAGTGTGGACGG+AGG - tig0000496:75969-75988 Msa1335550:CDS 60.0%
ATCAGAGTGTGGACGGAGGC+AGG - tig0000496:75973-75992 Msa1335550:CDS 60.0%
TCCCAGCTGACCCCTACAAC+CGG + tig0000496:76116-76135 None:intergenic 60.0%
ACAAGCAGGATGCTGGGAGG+AGG + tig0000496:76948-76967 None:intergenic 60.0%
ACGCGGCAGAAGACACGGGT+GGG + tig0000496:68996-69015 None:intergenic 65.0%
AACGCGGCAGAAGACACGGG+TGG + tig0000496:68997-69016 None:intergenic 65.0%
CCAGCTGACCCCTACAACCG+GGG + tig0000496:76114-76133 None:intergenic 65.0%
CCCAGCTGACCCCTACAACC+GGG + tig0000496:76115-76134 None:intergenic 65.0%
CCCGGTTGTAGGGGTCAGCT+GGG - tig0000496:76112-76131 Msa1335550:CDS 65.0%
CCCCGGTTGTAGGGGTCAGC+TGG - tig0000496:76111-76130 Msa1335550:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0000496 gene 68878 77641 68878 ID=Msa1335550;Name=Msa1335550
tig0000496 mRNA 68878 77641 68878 ID=Msa1335550-mRNA-1;Parent=Msa1335550;Name=Msa1335550-mRNA-1;_AED=0.16;_eAED=0.16;_QI=267|1|0.93|1|0.92|0.86|15|269|595
tig0000496 exon 68878 69044 68878 ID=Msa1335550-mRNA-1:exon:283;Parent=Msa1335550-mRNA-1
tig0000496 exon 69066 69387 69066 ID=Msa1335550-mRNA-1:exon:282;Parent=Msa1335550-mRNA-1
tig0000496 exon 69647 69721 69647 ID=Msa1335550-mRNA-1:exon:281;Parent=Msa1335550-mRNA-1
tig0000496 exon 70892 70965 70892 ID=Msa1335550-mRNA-1:exon:280;Parent=Msa1335550-mRNA-1
tig0000496 exon 71041 71094 71041 ID=Msa1335550-mRNA-1:exon:279;Parent=Msa1335550-mRNA-1
tig0000496 exon 71245 71319 71245 ID=Msa1335550-mRNA-1:exon:278;Parent=Msa1335550-mRNA-1
tig0000496 exon 71729 71850 71729 ID=Msa1335550-mRNA-1:exon:277;Parent=Msa1335550-mRNA-1
tig0000496 exon 71968 72126 71968 ID=Msa1335550-mRNA-1:exon:276;Parent=Msa1335550-mRNA-1
tig0000496 exon 72326 72389 72326 ID=Msa1335550-mRNA-1:exon:275;Parent=Msa1335550-mRNA-1
tig0000496 exon 72838 72988 72838 ID=Msa1335550-mRNA-1:exon:274;Parent=Msa1335550-mRNA-1
tig0000496 exon 75005 75051 75005 ID=Msa1335550-mRNA-1:exon:273;Parent=Msa1335550-mRNA-1
tig0000496 exon 75139 75233 75139 ID=Msa1335550-mRNA-1:exon:272;Parent=Msa1335550-mRNA-1
tig0000496 exon 75962 76406 75962 ID=Msa1335550-mRNA-1:exon:271;Parent=Msa1335550-mRNA-1
tig0000496 exon 76527 76672 76527 ID=Msa1335550-mRNA-1:exon:270;Parent=Msa1335550-mRNA-1
tig0000496 exon 77314 77641 77314 ID=Msa1335550-mRNA-1:exon:269;Parent=Msa1335550-mRNA-1
tig0000496 five_prime_UTR 77375 77641 77375 ID=Msa1335550-mRNA-1:five_prime_utr;Parent=Msa1335550-mRNA-1
tig0000496 CDS 77314 77374 77314 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 76527 76672 76527 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 75962 76406 75962 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 75139 75233 75139 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 75005 75051 75005 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 72838 72988 72838 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 72326 72389 72326 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 71968 72126 71968 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 71729 71850 71729 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 71245 71319 71245 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 71041 71094 71041 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 70892 70965 70892 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 69647 69721 69647 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 CDS 69168 69387 69168 ID=Msa1335550-mRNA-1:cds;Parent=Msa1335550-mRNA-1
tig0000496 three_prime_UTR 69066 69167 69066 ID=Msa1335550-mRNA-1:three_prime_utr;Parent=Msa1335550-mRNA-1
tig0000496 three_prime_UTR 68878 69044 68878 ID=Msa1335550-mRNA-1:three_prime_utr;Parent=Msa1335550-mRNA-1
Gene Sequence

>Msa1335550

ATGGCTTCCATCACCTCCGTCGAACTCAATTATCTCGTCTTTCGCTACCTTCAAGAATCAGGTTTCACACATTCTGCTTTTGTGTTTGGGAATGAGGGTGGCATTAACAAATGCCCCATTGATGGAAATTTGGTACCACCGGGGGCTCTTGTTACATTTGTTCAGAAGGGACTACAGTTCTTGGAGATGGAAGCTAACTTGAATAATTGTGATGCAGACTTCGATGAAGATTTTTCGTTCTTACAACCTTTGGATCTTATCACAAAAGACGTGCATGAACTTAAGAAAATGATTAATGAAAGAAGAAGAAAACGACAGAGGGGTAAAAATAAGGAATCTGAAAAAGAGCATGATGGTGACCGCGGTCTGACAAGAGAAAAGGAAAGACAGGAAAGGGAGAAAGAACGTGAAAAGGATAAAGAGAAGGTAGAAAATCATAAAGAGCAAGAACTGCAAAATGAAAATCAGATCAGTAGAGAAATGGTCTCAGATCAAGAAGATAAGGTTAATGGTGCTAAAAAAGAAGATGCTAAAAAGAAAGACAAGGTTAATGGTACTAAAAAAGAAGATGCTAAAAAAGAAGGTAAGGTTAATGGTGCTAAAAAAGAAGATAAGGTTAATGTAAAGCTTGAGGAGGATGGAGCATTTGGAGGACCAGAGCCCATGGACATATGTACAACATCAGCATCTCAGCCATGTGAATTTCCTAAGTCAGATGTGACAATTTTGGAAGGGCATAAGTCAGAGGTCTGTGCTTGTGCATGGAGTCCTACAGGATCCTTTCTTGCATCAGGGTCTGGGGATTCAACAGCTCGTATTTGGACAATAGCTGAAGCGACGCGTAAATTAGATTCCAAGAACGACCCTTCGACTGTGTTGGTGTTGCAGCACATCAGGGGTACAACCACTGAAAAGAATAAAGATGTCACTACACTTGATTGGAATGGGGAGGGGACACTACTTGCAACCGGTTCTTATGATGGTCAAGCACGAATTTGGACCGCTAATGGTGAACTAAAGAGTACATTAAGCAAACACAAGGGACCCATATTTTCTCTGAAGTGGAATAAGAAAGGAGATTATCTTCTTACTGGAAGTTTCGATGGGTCTGCAATTGTATGGGATGTTCAAGCTGAGAAATCAAAACAACAATTTGATTTTCACAGCGGTTCAACACTCGACGTTGATTGGCGCAATAATGTGTCATTTGCATCAAGCTCCAATGACACCATGATACATGTTTGCAAGATTGGCGAAAACAACCCAGTAAAAACTTTTGCCGGGCACCAGAGTGAAGTTAATTGTATCAAATGGGATCCCACAGGTTCATTACTGGCCTCGTGTTCAGACGATAACACTGCAAAGATATGGAGTATGAAGCAAGATAAGTATATTCATGATTTTAGGGAGCATTCCAAGGAGATATATGCTATCAGATGGAGCCCAACTGGTCCTGCTACAAATAACCCTAATAAGAAATTGGTGTTGGCTAGTGCATCAGTTGACTCTACCGTAAAGCTATGGGATGTGGAACTCGGGAAACTAATTCATAGCTTGAATGGACACAGGGATCGTGTATATACTATTGCATTCAGCCCCAATGGTGAGTATTTAGCCAGTGGGTCCCATGACAAATCCATAAATATATGGTCCTTGAATGATGGCAAGATCATTAAAACATACAACGGCAATGGAGGTATTTTTGAGGTCTGTTGGAACAAGGAGGGTGACAAGATCGCTGCCTGTTTTTCTAACAATACAGTTTGCGTTTTGGATTTCAGAATGTAA
Protein sequence

>Msa1335550

MASITSVELNYLVFRYLQESGFTHSAFVFGNEGGINKCPIDGNLVPPGALVTFVQKGLQFLEMEANLNNCDADFDEDFSFLQPLDLITKDVHELKKMINERRRKRQRGKNKESEKEHDGDRGLTREKERQEREKEREKDKEKVENHKEQELQNENQISREMVSDQEDKVNGAKKEDAKKKDKVNGTKKEDAKKEGKVNGAKKEDKVNVKLEEDGAFGGPEPMDICTTSASQPCEFPKSDVTILEGHKSEVCACAWSPTGSFLASGSGDSTARIWTIAEATRKLDSKNDPSTVLVLQHIRGTTTEKNKDVTTLDWNGEGTLLATGSYDGQARIWTANGELKSTLSKHKGPIFSLKWNKKGDYLLTGSFDGSAIVWDVQAEKSKQQFDFHSGSTLDVDWRNNVSFASSSNDTMIHVCKIGENNPVKTFAGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEIYAIRWSPTGPATNNPNKKLVLASASVDSTVKLWDVELGKLIHSLNGHRDRVYTIAFSPNGEYLASGSHDKSINIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAACFSNNTVCVLDFRM*