AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0835810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835810 MtrunA17_Chr5g0401671 95.126 595 29 0 1 595 1 595 0.0 1128
Msa0835810 MtrunA17_Chr5g0401661 87.267 589 58 4 9 595 112 685 0.0 997
Msa0835810 MtrunA17_Chr4g0053651 72.697 597 142 4 1 595 1 578 0.0 897
Msa0835810 MtrunA17_Chr4g0067151 27.003 337 222 10 220 551 5 322 2.72e-30 121
Msa0835810 MtrunA17_Chr4g0067151 25.738 237 156 4 339 564 19 246 1.54e-20 93.2
Msa0835810 MtrunA17_Chr4g0067151 25.106 235 147 5 238 462 111 326 1.50e-17 84.3
Msa0835810 MtrunA17_Chr4g0067151 26.190 168 105 3 424 581 21 179 1.36e-14 75.1
Msa0835810 MtrunA17_Chr1g0176241 26.893 383 189 8 243 550 115 481 3.69e-29 121
Msa0835810 MtrunA17_Chr1g0176241 33.537 164 102 5 403 565 134 291 2.56e-17 85.1
Msa0835810 MtrunA17_Chr3g0136971 25.610 328 200 8 241 565 344 630 8.43e-28 118
Msa0835810 MtrunA17_Chr3g0136971 26.154 260 173 4 237 494 409 651 9.52e-19 90.1
Msa0835810 MtrunA17_Chr3g0136971 23.308 266 156 6 362 592 363 615 6.54e-18 87.8
Msa0835810 MtrunA17_Chr3g0136971 25.126 199 111 3 425 594 344 533 2.01e-12 70.1
Msa0835810 MtrunA17_Chr1g0200901 27.532 316 159 9 240 552 73 321 2.87e-27 114
Msa0835810 MtrunA17_Chr1g0200901 22.764 246 133 6 320 560 95 288 4.55e-12 68.2
Msa0835810 MtrunA17_Chr1g0200901 25.571 219 146 5 243 460 202 404 1.80e-11 66.2
Msa0835810 MtrunA17_Chr8g0352821 27.928 333 219 9 266 588 140 461 8.20e-27 115
Msa0835810 MtrunA17_Chr1g0172501 29.310 232 155 2 321 551 330 553 5.50e-26 112
Msa0835810 MtrunA17_Chr1g0172501 24.783 230 145 4 349 568 274 485 1.38e-17 86.3
Msa0835810 MtrunA17_Chr1g0172501 25.114 219 144 3 243 458 352 553 3.19e-15 79.0
Msa0835810 MtrunA17_Chr1g0172501 28.161 174 113 4 423 594 307 470 1.51e-11 67.0
Msa0835810 MtrunA17_Chr6g0448921 29.537 281 168 9 320 590 31 291 7.37e-26 112
Msa0835810 MtrunA17_Chr6g0448921 24.194 186 130 2 383 566 10 186 1.59e-18 89.7
Msa0835810 MtrunA17_Chr6g0448921 28.324 173 113 3 423 593 9 172 1.34e-17 86.7
Msa0835810 MtrunA17_Chr3g0093681 29.310 232 155 2 321 551 330 553 1.31e-25 111
Msa0835810 MtrunA17_Chr3g0093681 24.783 230 145 4 349 568 274 485 1.11e-17 86.7
Msa0835810 MtrunA17_Chr3g0093681 25.114 219 144 3 243 458 352 553 5.94e-15 78.2
Msa0835810 MtrunA17_Chr3g0093681 28.161 174 113 4 423 594 307 470 1.43e-11 67.4
Msa0835810 MtrunA17_Chr2g0281451 29.487 234 153 4 320 551 30 253 2.22e-23 105
Msa0835810 MtrunA17_Chr2g0281451 24.731 186 129 2 383 566 9 185 3.35e-17 85.9
Msa0835810 MtrunA17_Chr2g0281451 28.324 173 113 4 423 593 8 171 2.17e-15 80.1
Msa0835810 MtrunA17_Chr1g0185501 26.899 316 197 10 243 550 23 312 5.66e-23 100
Msa0835810 MtrunA17_Chr1g0185501 24.286 280 171 7 342 581 22 300 7.98e-22 96.7
Msa0835810 MtrunA17_Chr1g0185501 26.754 228 138 7 240 457 104 312 2.72e-15 77.4
Msa0835810 MtrunA17_Chr7g0253861 26.336 262 171 7 343 592 51 302 1.09e-22 99.8
Msa0835810 MtrunA17_Chr7g0253861 27.692 325 196 11 237 549 45 342 4.51e-22 97.8
Msa0835810 MtrunA17_Chr7g0253861 30.114 176 112 3 421 594 46 212 1.86e-14 75.1
Msa0835810 MtrunA17_Chr5g0405851 24.444 315 214 5 245 551 152 450 9.65e-22 98.6
Msa0835810 MtrunA17_Chr5g0405851 26.577 222 138 4 355 560 162 374 2.82e-17 84.7
Msa0835810 MtrunA17_Chr5g0405851 29.448 163 102 5 442 594 166 325 2.34e-14 75.9
Msa0835810 MtrunA17_Chr5g0405851 25.112 223 139 5 243 458 249 450 3.28e-13 72.0
Msa0835810 MtrunA17_Chr1g0171711 28.205 234 152 7 341 571 503 723 2.36e-21 98.6
Msa0835810 MtrunA17_Chr1g0171711 25.000 328 195 10 235 550 497 785 9.21e-17 84.3
Msa0835810 MtrunA17_Chr1g0171711 25.000 260 176 8 304 558 507 752 2.97e-15 79.3
Msa0835810 MtrunA17_Chr7g0266251 27.647 340 157 14 239 549 8 287 8.09e-20 91.3
Msa0835810 MtrunA17_Chr7g0266251 25.660 265 126 9 309 550 19 235 8.86e-18 85.1
Msa0835810 MtrunA17_Chr7g0266251 26.482 253 137 9 240 459 106 342 4.87e-13 70.9
Msa0835810 MtrunA17_Chr7g0266251 26.776 183 108 7 423 588 9 182 2.90e-12 68.6
Msa0835810 MtrunA17_Chr7g0246741 25.733 307 158 7 308 592 371 629 8.89e-20 94.0
Msa0835810 MtrunA17_Chr7g0246741 25.628 199 94 4 428 581 367 556 2.25e-14 76.6
Msa0835810 MtrunA17_Chr8g0392701 30.909 220 137 6 360 571 29 241 6.68e-19 88.2
Msa0835810 MtrunA17_Chr8g0392701 26.295 251 163 8 320 559 30 269 9.26e-16 79.0
Msa0835810 MtrunA17_Chr3g0144511 24.518 363 215 14 223 552 35 371 2.51e-18 87.4
Msa0835810 MtrunA17_Chr3g0144511 22.727 242 152 9 342 562 60 287 1.85e-14 75.5
Msa0835810 MtrunA17_Chr3g0095501 24.355 349 213 11 234 564 257 572 8.99e-18 87.0
Msa0835810 MtrunA17_Chr4g0070791 26.688 311 187 10 220 509 29 319 3.18e-17 83.2
Msa0835810 MtrunA17_Chr4g0070791 22.404 366 218 12 241 593 8 320 3.42e-16 80.1
Msa0835810 MtrunA17_Chr3g0103361 26.471 306 193 9 245 545 17 295 4.66e-17 82.4
Msa0835810 MtrunA17_Chr3g0103361 27.841 176 110 4 424 593 13 177 2.49e-14 74.3
Msa0835810 MtrunA17_Chr3g0103361 24.113 282 155 9 307 581 20 249 1.08e-12 69.3
Msa0835810 MtrunA17_Chr3g0138311 25.614 285 157 10 309 550 624 896 1.16e-16 84.0
Msa0835810 MtrunA17_Chr3g0138311 26.872 227 145 8 350 571 624 834 2.42e-14 76.6
Msa0835810 MtrunA17_Chr2g0295791 24.651 215 150 3 332 544 155 359 1.20e-16 82.8
Msa0835810 MtrunA17_Chr2g0295791 27.160 162 109 1 399 560 181 333 5.96e-15 77.8
Msa0835810 MtrunA17_Chr2g0295791 21.239 339 230 7 236 564 159 470 3.19e-12 68.9
Msa0835810 MtrunA17_Chr7g0267961 23.711 291 173 7 309 552 142 430 1.74e-16 82.4
Msa0835810 MtrunA17_Chr2g0283891 29.121 182 114 7 420 595 97 269 3.16e-16 80.1
Msa0835810 MtrunA17_Chr2g0284241 24.611 321 196 10 261 564 22 313 4.09e-16 80.1
Msa0835810 MtrunA17_Chr7g0233651 22.772 303 135 7 301 552 160 414 9.09e-16 80.1
Msa0835810 MtrunA17_Chr4g0026671 22.817 355 204 8 309 593 16 370 1.08e-15 80.9
Msa0835810 MtrunA17_Chr2g0307941 21.552 348 197 8 244 581 15 296 1.84e-15 80.1
Msa0835810 MtrunA17_Chr2g0307941 23.693 287 178 8 235 509 50 307 1.01e-13 74.7
Msa0835810 MtrunA17_Chr2g0307941 26.000 200 130 3 401 592 34 223 5.32e-12 68.9
Msa0835810 MtrunA17_Chr5g0442391 25.602 332 202 10 235 553 252 551 1.90e-15 79.7
Msa0835810 MtrunA17_Chr5g0442391 27.586 174 112 4 423 592 257 420 5.59e-12 68.6
Msa0835810 MtrunA17_Chr4g0069701 28.992 238 137 6 320 554 78 286 1.97e-15 80.1
Msa0835810 MtrunA17_Chr4g0069701 23.529 323 201 9 243 550 402 693 5.78e-13 72.0
Msa0835810 MtrunA17_Chr4g0069701 28.058 139 87 3 425 559 101 230 3.77e-11 66.2
Msa0835810 MtrunA17_Chr7g0228191 22.642 265 158 4 334 552 56 319 2.15e-15 77.8
Msa0835810 MtrunA17_Chr4g0059031 28.962 183 118 3 405 581 77 253 2.97e-15 79.3
Msa0835810 MtrunA17_Chr4g0059031 25.610 246 157 7 320 550 419 653 1.21e-14 77.4
Msa0835810 MtrunA17_Chr4g0059031 22.628 274 186 7 306 562 359 623 4.54e-13 72.4
Msa0835810 MtrunA17_Chr4g0059031 21.739 299 180 9 229 508 390 653 5.57e-11 65.9
Msa0835810 MtrunA17_Chr4g0057141 23.029 482 282 15 127 582 217 635 3.77e-15 79.0
Msa0835810 MtrunA17_Chr2g0321211 22.507 351 206 8 309 593 16 366 3.88e-15 79.3
Msa0835810 MtrunA17_Chr2g0282401 26.778 239 152 9 343 576 508 728 5.06e-15 78.6
Msa0835810 MtrunA17_Chr2g0282401 22.961 331 215 10 226 550 491 787 3.34e-11 66.2
Msa0835810 MtrunA17_Chr7g0235181 25.475 263 172 10 304 552 152 404 7.97e-15 77.0
Msa0835810 MtrunA17_Chr5g0395821 23.288 292 163 8 312 550 143 426 1.68e-14 76.3
Msa0835810 MtrunA17_Chr1g0185891 23.029 482 280 16 129 582 156 574 2.11e-14 76.3
Msa0835810 MtrunA17_Chr5g0438901 22.188 329 218 11 290 591 356 673 2.14e-14 76.6
Msa0835810 MtrunA17_Chr3g0111961 23.630 292 158 9 312 552 185 462 3.28e-14 75.5
Msa0835810 MtrunA17_Chr2g0308501 27.556 225 144 8 305 520 16 230 3.44e-14 74.3
Msa0835810 MtrunA17_Chr4g0004241 22.780 259 181 6 338 588 6 253 5.22e-14 75.5
Msa0835810 MtrunA17_Chr4g0004241 21.477 298 222 5 298 590 7 297 5.51e-13 72.4
Msa0835810 MtrunA17_Chr1g0148791 25.778 225 144 8 355 571 630 839 6.49e-14 75.1
Msa0835810 MtrunA17_Chr1g0148791 21.450 331 206 11 235 550 610 901 6.73e-13 72.0
Msa0835810 MtrunA17_Chr1g0148791 22.785 316 221 9 261 567 576 877 8.28e-13 71.6
Msa0835810 MtrunA17_Chr1g0148791 29.448 163 102 4 432 592 624 775 3.05e-12 69.7
Msa0835810 MtrunA17_Chr2g0331961 27.753 227 149 5 346 567 100 316 9.93e-14 72.4
Msa0835810 MtrunA17_Chr2g0331981 22.780 259 181 6 338 588 6 253 1.40e-13 73.9
Msa0835810 MtrunA17_Chr2g0331981 21.141 298 223 5 298 590 7 297 1.09e-12 71.2
Msa0835810 MtrunA17_Chr3g0098921 23.693 287 169 9 312 550 147 431 1.93e-13 72.8
Msa0835810 MtrunA17_Chr4g0036951 24.060 266 140 9 343 589 158 380 3.09e-13 72.0
Msa0835810 MtrunA17_Chr3g0099061 27.419 248 146 9 354 584 221 451 3.36e-13 72.4
Msa0835810 MtrunA17_Chr3g0099061 25.444 169 123 3 428 594 212 379 4.33e-13 72.0
Msa0835810 MtrunA17_Chr3g0099061 20.743 323 224 8 241 550 208 511 7.13e-12 68.2
Msa0835810 MtrunA17_Chr4g0058091 24.172 302 166 7 340 590 223 512 3.71e-13 72.0
Msa0835810 MtrunA17_Chr8g0383711 22.768 224 161 3 342 564 13 225 4.26e-13 70.5
Msa0835810 MtrunA17_Chr8g0383711 19.062 320 229 7 234 550 5 297 2.23e-12 68.2
Msa0835810 MtrunA17_Chr2g0322171 25.483 259 149 7 307 561 11 229 5.66e-13 70.5
Msa0835810 MtrunA17_Chr1g0168391 23.622 254 145 5 309 561 227 432 6.78e-13 71.2
Msa0835810 MtrunA17_Chr1g0168391 21.673 263 189 6 297 550 257 511 6.53e-12 68.2
Msa0835810 MtrunA17_Chr2g0292301 25.862 232 163 5 243 469 145 372 7.17e-13 71.2
Msa0835810 MtrunA17_Chr7g0237241 23.841 302 207 10 260 556 456 739 1.17e-12 70.9
Msa0835810 MtrunA17_Chr8g0390861 22.407 241 171 3 320 557 883 1110 1.43e-12 70.9
Msa0835810 MtrunA17_Chr8g0388841 26.180 233 138 8 346 576 266 466 1.51e-12 70.5
Msa0835810 MtrunA17_Chr7g0234591 24.719 267 176 11 301 552 157 413 1.85e-12 69.7
Msa0835810 MtrunA17_Chr7g0234591 23.874 222 151 5 309 520 123 336 4.32e-12 68.6
Msa0835810 MtrunA17_Chr1g0146771 26.809 235 139 8 343 576 255 457 3.93e-12 69.3
Msa0835810 MtrunA17_Chr1g0183051 24.444 315 192 10 234 512 203 507 4.96e-12 68.6
Msa0835810 MtrunA17_Chr2g0294611 20.885 407 217 15 239 561 236 621 8.68e-12 68.6
Msa0835810 MtrunA17_Chr4g0047051 25.191 262 163 12 301 550 67 307 1.47e-11 65.9
Msa0835810 MtrunA17_Chr3g0116561 23.022 278 196 6 321 590 240 507 1.76e-11 67.0
Msa0835810 MtrunA17_Chr1g0194721 35.878 131 72 4 423 550 235 356 2.22e-11 67.4
Msa0835810 MtrunA17_Chr7g0237271 24.314 255 170 9 309 556 510 748 2.55e-11 66.6
Msa0835810 MtrunA17_Chr7g0237271 22.364 313 192 11 250 550 510 783 7.44e-11 65.1
Msa0835810 MtrunA17_Chr8g0384161 23.481 362 202 12 246 544 11 360 2.76e-11 66.2
Msa0835810 MtrunA17_Chr1g0172761 50.000 56 28 0 495 550 17 72 3.03e-11 59.7
Msa0835810 MtrunA17_Chr2g0308391 20.870 345 202 12 235 564 114 402 3.47e-11 65.5
Msa0835810 MtrunA17_Chr4g0062881 26.012 173 115 4 421 592 171 331 3.66e-11 65.9
Msa0835810 MtrunA17_Chr8g0392731 23.237 241 162 8 341 567 53 284 4.13e-11 65.9
Msa0835810 MtrunA17_Chr1g0191191 22.222 288 192 8 313 581 85 359 4.53e-11 65.9
Msa0835810 MtrunA17_Chr4g0057131 20.833 240 153 2 350 552 212 451 5.79e-11 65.1
Msa0835810 MtrunA17_Chr3g0132771 21.723 267 165 7 310 568 2981 3211 6.29e-11 65.9
Msa0835810 MtrunA17_Chr1g0197551 22.957 257 151 8 309 552 96 318 9.41e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835810 AT5G67320.1 63.192 614 206 5 1 595 1 613 0.0 767
Msa0835810 AT3G49660.1 27.885 312 204 9 243 551 20 313 1.29e-29 119
Msa0835810 AT3G49660.1 24.348 230 158 4 342 564 19 239 6.79e-20 91.3
Msa0835810 AT3G49660.1 23.875 289 197 9 289 564 6 284 7.38e-20 91.3
Msa0835810 AT3G49660.1 25.322 233 147 5 238 462 104 317 1.10e-19 90.9
Msa0835810 AT3G49660.1 29.268 164 101 3 424 581 18 172 1.04e-15 79.0
Msa0835810 AT2G41500.1 23.185 427 287 9 141 551 135 536 5.77e-27 115
Msa0835810 AT2G41500.1 26.699 206 139 4 349 552 257 452 1.40e-16 83.6
Msa0835810 AT2G41500.1 27.528 178 116 4 420 595 288 454 1.13e-13 74.3
Msa0835810 AT2G41500.2 23.185 427 287 9 141 551 135 536 5.77e-27 115
Msa0835810 AT2G41500.2 26.699 206 139 4 349 552 257 452 1.40e-16 83.6
Msa0835810 AT2G41500.2 27.528 178 116 4 420 595 288 454 1.13e-13 74.3
Msa0835810 AT5G52820.1 25.199 377 224 9 243 581 105 461 1.11e-25 110
Msa0835810 AT5G52820.1 29.781 319 176 13 243 550 190 471 1.59e-25 110
Msa0835810 AT5G52820.1 22.727 330 177 9 342 594 104 432 1.69e-14 76.6
Msa0835810 AT5G25150.1 25.000 276 171 5 317 565 363 629 1.94e-25 111
Msa0835810 AT5G25150.1 25.455 275 137 6 237 510 408 615 4.39e-17 85.5
Msa0835810 AT5G25150.1 28.342 187 116 4 425 594 347 532 6.03e-13 72.4
Msa0835810 AT5G25150.2 25.000 276 171 5 317 565 363 629 2.49e-25 111
Msa0835810 AT5G25150.2 25.455 275 137 6 237 510 408 615 5.25e-17 85.1
Msa0835810 AT5G25150.2 28.342 187 116 4 425 594 347 532 7.52e-13 72.0
Msa0835810 AT2G26060.2 28.274 336 153 10 243 549 16 292 5.15e-25 107
Msa0835810 AT2G26060.2 25.385 260 129 7 315 557 36 247 1.36e-15 79.0
Msa0835810 AT2G26060.1 28.274 336 153 10 243 549 16 292 7.82e-25 106
Msa0835810 AT2G26060.1 25.385 260 129 7 315 557 36 247 2.13e-15 78.6
Msa0835810 AT2G26060.1 26.190 252 140 9 240 459 111 348 2.26e-14 75.5
Msa0835810 AT2G32700.7 27.052 329 201 12 227 550 511 805 2.35e-24 108
Msa0835810 AT2G32700.2 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa0835810 AT2G32700.5 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa0835810 AT2G32700.1 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa0835810 AT2G32700.4 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa0835810 AT2G32700.3 27.052 329 201 12 227 550 492 786 3.02e-24 108
Msa0835810 AT2G32700.6 27.052 329 201 12 227 550 490 784 3.46e-24 108
Msa0835810 AT2G43770.1 27.481 262 168 7 343 592 49 300 9.34e-24 103
Msa0835810 AT2G43770.1 26.593 361 216 14 211 549 7 340 8.64e-22 97.4
Msa0835810 AT2G43770.1 30.857 175 110 3 422 594 45 210 3.09e-14 74.7
Msa0835810 AT5G13480.3 25.526 333 227 9 266 588 68 389 1.73e-23 105
Msa0835810 AT5G13480.3 27.347 245 149 5 242 457 148 392 1.20e-18 90.1
Msa0835810 AT5G13480.3 24.460 278 197 4 291 564 52 320 2.38e-18 89.4
Msa0835810 AT5G13480.2 25.526 333 227 9 266 588 91 412 2.16e-23 105
Msa0835810 AT5G13480.2 27.347 245 149 5 242 457 171 415 9.89e-19 90.5
Msa0835810 AT5G13480.2 24.188 277 197 4 291 564 77 343 4.63e-17 85.5
Msa0835810 AT5G13480.4 25.526 333 227 9 266 588 68 389 2.48e-23 105
Msa0835810 AT5G13480.4 27.347 245 149 5 242 457 148 392 1.49e-18 90.1
Msa0835810 AT5G13480.4 24.460 278 197 4 291 564 52 320 3.36e-18 89.0
Msa0835810 AT5G13480.1 25.526 333 227 9 266 588 80 401 3.03e-23 104
Msa0835810 AT5G13480.1 27.347 245 149 5 242 457 160 404 1.78e-18 89.7
Msa0835810 AT5G13480.1 24.460 278 197 4 291 564 64 332 3.99e-18 88.6
Msa0835810 AT4G02730.1 25.455 330 217 9 227 550 23 329 4.35e-23 101
Msa0835810 AT4G02730.1 26.354 277 162 8 328 564 25 299 4.63e-21 95.1
Msa0835810 AT4G02730.1 31.677 161 99 3 423 581 36 187 1.06e-17 85.1
Msa0835810 AT4G02730.1 23.228 254 157 8 226 462 100 332 3.18e-11 65.5
Msa0835810 AT1G11160.2 29.386 228 148 4 320 544 30 247 9.29e-23 103
Msa0835810 AT1G11160.2 25.738 237 164 4 346 579 14 241 6.80e-21 97.8
Msa0835810 AT1G11160.2 24.731 186 129 2 383 566 9 185 1.67e-16 84.0
Msa0835810 AT1G11160.2 30.636 173 109 4 423 593 8 171 2.94e-16 83.2
Msa0835810 AT1G11160.1 29.386 228 148 4 320 544 30 247 1.02e-22 103
Msa0835810 AT1G11160.1 25.738 237 164 4 346 579 14 241 7.63e-21 97.8
Msa0835810 AT1G11160.1 24.731 186 129 2 383 566 9 185 1.86e-16 84.0
Msa0835810 AT1G11160.1 30.636 173 109 4 423 593 8 171 3.15e-16 83.2
Msa0835810 AT1G11160.4 29.386 228 148 4 320 544 30 247 1.08e-22 103
Msa0835810 AT1G11160.4 25.738 237 164 4 346 579 14 241 8.15e-21 97.8
Msa0835810 AT1G11160.4 24.731 186 129 2 383 566 9 185 1.86e-16 84.0
Msa0835810 AT1G11160.4 30.636 173 109 4 423 593 8 171 3.62e-16 82.8
Msa0835810 AT5G23430.3 27.143 280 176 9 320 590 31 291 3.50e-21 98.6
Msa0835810 AT5G23430.3 24.194 186 130 2 383 566 10 186 4.19e-18 89.0
Msa0835810 AT5G23430.3 27.168 173 115 3 423 593 9 172 1.14e-16 84.3
Msa0835810 AT5G23430.2 27.143 280 176 9 320 590 31 291 3.50e-21 98.6
Msa0835810 AT5G23430.2 24.194 186 130 2 383 566 10 186 4.19e-18 89.0
Msa0835810 AT5G23430.2 27.168 173 115 3 423 593 9 172 1.14e-16 84.3
Msa0835810 AT5G23430.1 27.143 280 176 9 320 590 31 291 3.66e-21 98.6
Msa0835810 AT5G23430.1 24.194 186 130 2 383 566 10 186 4.31e-18 89.0
Msa0835810 AT5G23430.1 27.168 173 115 3 423 593 9 172 1.21e-16 84.3
Msa0835810 AT5G08390.1 27.143 280 176 9 320 590 31 291 4.18e-21 98.6
Msa0835810 AT5G08390.1 24.194 186 130 2 383 566 10 186 1.74e-18 90.1
Msa0835810 AT5G08390.1 30.058 173 110 4 423 593 9 172 2.64e-16 83.2
Msa0835810 AT1G11160.3 28.922 204 135 2 342 544 11 205 4.88e-21 98.6
Msa0835810 AT1G11160.3 25.874 143 97 1 424 566 10 143 7.82e-14 75.5
Msa0835810 AT1G11160.3 35.088 114 72 2 481 593 17 129 2.26e-12 70.9
Msa0835810 AT1G71840.1 24.576 354 205 8 240 550 63 397 1.07e-20 95.1
Msa0835810 AT1G61210.3 28.511 235 154 5 320 551 30 253 1.87e-20 96.7
Msa0835810 AT1G61210.3 26.496 234 160 4 346 576 14 238 1.75e-19 93.6
Msa0835810 AT1G61210.3 25.269 186 128 2 383 566 9 185 2.55e-17 86.7
Msa0835810 AT1G61210.3 28.902 173 112 4 423 593 8 171 1.62e-16 84.0
Msa0835810 AT1G61210.2 28.511 235 154 5 320 551 30 253 3.29e-20 95.9
Msa0835810 AT1G61210.2 26.496 234 160 4 346 576 14 238 2.96e-19 92.8
Msa0835810 AT1G61210.2 25.269 186 128 2 383 566 9 185 5.08e-17 85.9
Msa0835810 AT1G61210.2 28.902 173 112 4 423 593 8 171 1.94e-16 84.0
Msa0835810 AT1G61210.1 28.511 235 154 5 320 551 30 253 3.53e-20 95.9
Msa0835810 AT1G61210.1 26.496 234 160 4 346 576 14 238 3.01e-19 92.8
Msa0835810 AT1G61210.1 25.269 186 128 2 383 566 9 185 5.00e-17 85.9
Msa0835810 AT1G61210.1 28.902 173 112 4 423 593 8 171 1.86e-16 84.0
Msa0835810 AT5G56130.1 27.402 281 186 7 307 580 21 290 7.37e-20 91.3
Msa0835810 AT5G56130.1 23.795 332 209 11 244 570 17 309 1.28e-14 75.5
Msa0835810 AT5G56130.1 25.862 174 116 3 424 593 14 178 2.17e-12 68.9
Msa0835810 AT4G34460.4 24.251 334 205 10 243 552 56 365 1.18e-19 91.7
Msa0835810 AT4G34460.4 22.963 270 180 10 342 591 55 316 4.28e-16 80.9
Msa0835810 AT4G34460.1 24.167 360 219 12 223 552 35 370 1.49e-19 91.3
Msa0835810 AT4G34460.1 22.963 270 180 10 342 591 60 321 5.11e-16 80.5
Msa0835810 AT4G32990.1 27.809 356 172 15 239 552 12 324 1.14e-18 87.8
Msa0835810 AT4G32990.1 24.746 295 133 12 320 588 35 266 1.72e-13 72.4
Msa0835810 AT4G34460.2 25.373 268 169 8 309 552 48 308 1.00e-17 85.1
Msa0835810 AT4G34460.2 22.137 262 176 10 350 591 6 259 2.48e-13 71.6
Msa0835810 AT4G32990.2 24.471 331 148 12 243 549 16 268 2.23e-17 83.2
Msa0835810 AT4G32990.2 24.735 283 125 11 320 576 35 255 1.95e-13 71.6
Msa0835810 AT1G48630.1 28.512 242 157 7 339 571 7 241 3.99e-17 83.2
Msa0835810 AT1G48630.1 26.295 251 163 8 320 559 30 269 8.08e-16 79.3
Msa0835810 AT1G15440.1 22.302 278 183 5 308 561 391 659 8.10e-17 85.1
Msa0835810 AT4G32551.1 25.448 279 146 10 298 571 647 868 9.49e-17 84.7
Msa0835810 AT4G32551.1 21.981 323 214 11 235 550 639 930 2.13e-14 77.0
Msa0835810 AT4G32551.1 29.651 172 108 4 423 592 644 804 2.33e-13 73.9
Msa0835810 AT4G32551.2 25.448 279 146 10 298 571 685 906 1.01e-16 84.7
Msa0835810 AT4G32551.2 21.981 323 214 11 235 550 677 968 2.01e-14 77.4
Msa0835810 AT4G32551.2 29.651 172 108 4 423 592 682 842 2.72e-13 73.6
Msa0835810 AT1G15440.2 22.302 278 183 5 308 561 351 619 1.04e-16 84.7
Msa0835810 AT3G18140.1 24.074 324 204 9 261 571 7 301 1.07e-16 81.6
Msa0835810 AT3G18130.1 29.545 220 140 6 360 571 29 241 1.14e-16 82.0
Msa0835810 AT3G18130.1 25.100 251 166 8 320 559 30 269 2.53e-15 77.8
Msa0835810 AT2G22040.1 24.383 324 191 11 261 564 12 301 4.46e-16 80.1
Msa0835810 AT1G18080.1 28.163 245 159 8 339 573 7 244 6.20e-16 79.7
Msa0835810 AT1G18080.1 27.119 236 145 8 335 559 51 270 8.44e-15 76.3
Msa0835810 AT4G34460.3 22.963 270 180 10 342 591 60 321 6.73e-16 80.1
Msa0835810 AT4G34460.3 23.549 293 180 9 243 515 61 329 3.18e-12 68.6
Msa0835810 AT3G44530.2 23.714 350 201 10 309 593 16 364 1.07e-15 81.3
Msa0835810 AT4G15900.1 20.779 308 182 5 333 588 162 459 1.10e-15 80.5
Msa0835810 AT3G16650.1 23.429 350 226 9 215 557 56 370 1.27e-15 80.1
Msa0835810 AT5G16750.1 24.291 247 161 7 319 550 417 652 1.42e-15 80.9
Msa0835810 AT5G16750.1 22.993 274 152 6 237 508 436 652 8.57e-12 68.9
Msa0835810 AT3G44530.1 23.714 350 201 10 309 593 16 364 1.44e-15 80.9
Msa0835810 AT5G26900.1 24.306 288 169 8 312 552 132 417 1.55e-15 79.7
Msa0835810 AT4G33260.1 23.390 295 163 9 312 552 136 421 3.60e-15 78.6
Msa0835810 AT4G33270.1 23.390 295 163 9 312 552 146 431 3.63e-15 78.6
Msa0835810 AT4G29830.1 23.098 368 213 12 241 593 8 320 4.56e-15 77.0
Msa0835810 AT1G49040.1 24.066 241 167 3 320 557 869 1096 5.67e-15 79.3
Msa0835810 AT5G27945.1 23.569 297 140 7 301 552 147 401 6.00e-15 77.8
Msa0835810 AT5G27080.1 23.875 289 170 7 312 552 129 415 6.32e-15 77.8
Msa0835810 AT4G35050.1 27.442 215 109 7 343 553 165 336 6.48e-15 77.8
Msa0835810 AT5G13840.1 23.856 306 182 9 309 570 177 475 6.68e-15 77.8
Msa0835810 AT5G13840.2 23.856 306 182 9 309 570 177 475 6.68e-15 77.8
Msa0835810 AT5G27570.1 24.436 266 177 10 301 552 168 423 1.01e-14 77.4
Msa0835810 AT1G73720.1 27.309 249 146 8 354 585 220 450 1.51e-14 77.0
Msa0835810 AT1G73720.1 27.711 166 118 2 428 592 211 375 2.23e-13 73.2
Msa0835810 AT1G73720.1 22.571 319 222 7 241 550 207 509 9.33e-11 65.1
Msa0835810 AT5G64630.2 23.262 374 207 12 250 557 16 375 1.54e-14 77.0
Msa0835810 AT3G21540.1 27.197 239 150 6 319 554 77 294 1.89e-14 77.4
Msa0835810 AT3G21540.1 25.234 321 196 9 244 550 403 693 8.54e-11 65.5
Msa0835810 AT2G05720.1 30.303 132 78 3 438 564 134 256 2.09e-14 74.3
Msa0835810 AT2G32950.1 22.424 330 216 12 290 591 354 671 4.37e-14 75.9
Msa0835810 AT5G64730.1 23.318 223 159 3 343 564 14 225 4.97e-14 73.6
Msa0835810 AT2G32950.2 24.242 264 169 10 347 591 307 558 5.03e-14 75.5
Msa0835810 AT1G29260.1 28.022 182 116 7 420 595 96 268 5.37e-14 73.9
Msa0835810 AT4G33260.2 23.368 291 160 9 312 548 136 417 5.51e-14 74.7
Msa0835810 AT4G22910.1 25.200 250 171 9 309 552 220 459 5.95e-14 75.1
Msa0835810 AT1G18830.1 28.755 233 139 10 295 511 105 326 6.33e-14 75.9
Msa0835810 AT1G18830.2 28.755 233 139 10 295 511 105 326 7.00e-14 75.5
Msa0835810 AT1G18830.3 28.755 233 139 10 295 511 105 326 7.00e-14 75.5
Msa0835810 AT5G64630.1 23.433 367 201 12 257 557 23 375 8.10e-14 73.9
Msa0835810 AT5G08560.1 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa0835810 AT5G08560.2 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa0835810 AT5G08560.3 24.925 333 206 9 234 553 261 562 1.12e-13 74.3
Msa0835810 AT1G52360.3 23.166 259 180 6 338 588 6 253 1.60e-13 74.3
Msa0835810 AT1G52360.3 21.141 298 223 5 298 590 7 297 1.72e-12 71.2
Msa0835810 AT1G52360.4 23.166 259 180 6 338 588 6 253 1.84e-13 74.3
Msa0835810 AT1G52360.4 21.141 298 223 5 298 590 7 297 1.83e-12 70.9
Msa0835810 AT1G52360.1 23.166 259 180 6 338 588 6 253 1.84e-13 74.3
Msa0835810 AT1G52360.1 21.141 298 223 5 298 590 7 297 1.83e-12 70.9
Msa0835810 AT1G52360.2 23.166 259 180 6 338 588 50 297 1.98e-13 73.9
Msa0835810 AT1G52360.2 21.141 298 223 5 298 590 51 341 1.74e-12 71.2
Msa0835810 AT1G10580.1 24.332 374 229 12 177 522 196 543 3.13e-13 73.2
Msa0835810 AT3G15980.1 21.477 298 222 5 298 590 7 297 3.80e-13 73.2
Msa0835810 AT3G15980.7 21.477 298 222 5 298 590 7 297 4.12e-13 73.2
Msa0835810 AT3G01340.1 25.362 276 140 11 341 590 50 285 4.56e-13 70.9
Msa0835810 AT3G01340.2 25.362 276 140 11 341 590 50 285 4.56e-13 70.9
Msa0835810 AT3G15980.3 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0835810 AT3G15980.6 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0835810 AT3G15980.2 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0835810 AT3G15980.4 21.477 298 222 5 298 590 7 297 5.26e-13 72.8
Msa0835810 AT3G15980.5 21.477 298 222 5 298 590 7 297 7.15e-13 72.4
Msa0835810 AT2G16780.1 26.047 215 112 7 343 553 164 335 1.19e-12 70.5
Msa0835810 AT1G79990.1 24.354 271 185 6 290 549 36 297 1.38e-12 71.2
Msa0835810 AT1G79990.1 22.222 234 164 5 338 564 6 228 2.80e-12 70.5
Msa0835810 AT1G79990.2 24.354 271 185 6 290 549 36 297 1.58e-12 71.2
Msa0835810 AT1G79990.2 22.222 234 164 5 338 564 6 228 2.82e-12 70.5
Msa0835810 AT5G43920.1 24.522 314 187 11 234 508 211 513 5.55e-12 68.9
Msa0835810 AT4G11920.1 22.500 240 149 3 350 552 212 451 8.99e-12 68.2
Msa0835810 AT1G27840.1 26.852 216 124 8 340 552 36 220 1.08e-11 67.8
Msa0835810 AT1G27840.3 26.852 216 124 8 340 552 36 220 1.13e-11 67.8
Msa0835810 AT2G21390.1 24.291 247 160 7 309 552 96 318 1.47e-11 68.2
Msa0835810 AT1G19750.1 26.389 216 125 8 340 552 36 220 1.63e-11 67.0
Msa0835810 AT1G48870.2 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa0835810 AT1G48870.3 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa0835810 AT1G48870.1 24.775 222 135 8 343 558 194 389 1.92e-11 67.4
Msa0835810 AT3G18860.2 25.263 285 181 11 321 594 34 297 2.07e-11 67.4
Msa0835810 AT3G18860.1 25.263 285 181 11 321 594 34 297 2.18e-11 67.4
Msa0835810 AT2G33340.2 23.438 256 145 7 309 561 225 432 2.33e-11 67.0
Msa0835810 AT2G33340.1 23.438 256 145 7 309 561 225 432 2.33e-11 67.0
Msa0835810 AT2G33340.3 23.438 256 145 7 309 561 225 432 2.96e-11 66.6
Msa0835810 AT2G47410.4 24.046 262 154 8 343 568 50 302 4.36e-11 66.6
Msa0835810 AT5G49430.2 24.147 381 187 16 245 562 285 626 4.42e-11 66.6
Msa0835810 AT5G49430.1 24.147 381 187 16 245 562 285 626 4.42e-11 66.6
Msa0835810 AT2G46280.3 24.609 256 139 8 307 552 11 222 5.73e-11 63.9
Msa0835810 AT2G47410.2 24.046 262 154 8 343 568 231 483 6.49e-11 66.2
Msa0835810 AT2G47410.1 24.046 262 154 8 343 568 232 484 6.49e-11 66.2
Msa0835810 AT3G42660.1 23.397 312 176 9 241 550 56 306 7.19e-11 65.9
Msa0835810 AT1G62020.1 21.222 311 199 9 246 552 50 318 9.37e-11 65.5

Find 162 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACTCCGTTGTAAGTTTA+TGG 0.077339 5_4:-9219871 Msa0835810:three_prime_UTR
ATTCAAGGACCATATATTTA+TGG 0.160905 5_4:+9220166 None:intergenic
GCCAACACCAATTTCTTATT+AGG 0.182828 5_4:+9221763 None:intergenic
ATTCCACTTCAGAGAAAATA+TGG 0.199133 5_4:+9222932 None:intergenic
GGGATTCAACAGCTCGTATT+TGG 0.216439 5_4:-9223824 Msa0835810:CDS
ATGATGGTCAAGCACGAATT+TGG 0.225147 5_4:-9223200 Msa0835810:CDS
ATATTGACAGAACTGTATTT+TGG 0.226598 5_4:-9219951 Msa0835810:three_prime_UTR
ATGCCCCATTGATGGAAATT+TGG 0.235574 5_4:-9227462 Msa0835810:CDS
CAAGAATGGTTAAAACTTAA+AGG 0.236174 5_4:+9219893 None:intergenic
AAAGGAGATTATCTTCTTAC+TGG 0.244089 5_4:-9222906 Msa0835810:CDS
TAAGTCAGATGTGACAATTT+TGG 0.259321 5_4:-9226017 Msa0835810:CDS
ATGATACATGTTTGCAAGAT+TGG 0.283530 5_4:-9222630 Msa0835810:CDS
ACAGGATCCTTTCTTGCATC+AGG 0.293482 5_4:-9225866 Msa0835810:CDS
CCAACACCAATTTCTTATTA+GGG 0.296590 5_4:+9221764 None:intergenic
AAATAACCCTAATAAGAAAT+TGG 0.302756 5_4:-9221770 Msa0835810:CDS
TCGTTATCATGTTGCATTCT+CGG 0.310013 5_4:-9219773 Msa0835810:three_prime_UTR
TAACAATACAGTTTGCGTTT+TGG 0.312131 5_4:-9220051 Msa0835810:CDS
CTTGAGGAGGATGGAGCATT+TGG 0.317776 5_4:-9226825 Msa0835810:CDS
TTCCACATCCCATAGCTTTA+CGG 0.321852 5_4:+9220551 None:intergenic
TCAGAAGGGACTACAGTTCT+TGG 0.325341 5_4:-9227411 Msa0835810:CDS
CTCGTTGAAGAGAACGGGTT+TGG 0.329647 5_4:+9228237 None:intergenic
GATCAAGAAGATAAGGTTAA+TGG 0.329734 5_4:-9226963 Msa0835810:CDS
TGTTGGTGTTGCAGCACATC+AGG 0.356475 5_4:-9223749 Msa0835810:CDS
GTGAAGTTAATTGTATCAAA+TGG 0.359842 5_4:-9222160 Msa0835810:CDS
GTTCAACACTCGACGTTGAT+TGG 0.363966 5_4:-9222692 Msa0835810:CDS
TTTCGCTACCTTCAAGAATC+AGG 0.370255 5_4:-9228174 Msa0835810:intron
CATAATCATTAGTAACTAGT+AGG 0.373232 5_4:-9219848 Msa0835810:three_prime_UTR
GGATCCCACAGGTTCATTAC+TGG 0.376344 5_4:-9222138 Msa0835810:CDS
TCTTCATCCGGGAATTATAT+AGG 0.385187 5_4:-9228412 Msa0835810:five_prime_UTR
AATGATCTTGCCATCATTCA+AGG 0.388091 5_4:+9220151 None:intergenic
CACAGTCGAAGGGTCGTTCT+TGG 0.388341 5_4:+9223770 None:intergenic
ATGACAAATCCATAAATATA+TGG 0.390659 5_4:-9220175 Msa0835810:CDS
GAACATACCTTGGAGCTATC+TGG 0.400897 5_4:+9219743 None:intergenic
TCGATGGGTCTGCAATTGTA+TGG 0.402215 5_4:-9222878 Msa0835810:CDS
GGCCCTTGAACCTCTTCATC+CGG 0.408311 5_4:-9228424 Msa0835810:five_prime_UTR
CTGGCTAAATACTCACCATT+GGG 0.418567 5_4:+9220206 None:intergenic
CCATGCTCGTTGAAGAGAAC+GGG 0.420217 5_4:+9228232 None:intergenic
CTTCTTACTGGAAGTTTCGA+TGG 0.421511 5_4:-9222894 Msa0835810:CDS
GGCAAGTCCTATATAATTCC+CGG 0.423859 5_4:+9228405 None:intergenic
GGTACCAAATTTCCATCAAT+GGG 0.429149 5_4:+9227458 None:intergenic
AAAATTGTCACATCTGACTT+AGG 0.438471 5_4:+9226019 None:intergenic
CTTGCAACCGGTTCTTATGA+TGG 0.442121 5_4:-9223216 Msa0835810:CDS
AGAAAAGGAAAGACAGGAAA+GGG 0.448728 5_4:-9227078 Msa0835810:CDS
TGAGAAGAGCCACCTTACTT+TGG 0.449886 5_4:-9220009 Msa0835810:three_prime_UTR
GCTATCAGATGGAGCCCAAC+TGG 0.449961 5_4:-9221802 Msa0835810:CDS
GCACGAATTTGGACCGCTAA+TGG 0.450598 5_4:-9223189 Msa0835810:intron
TGGTACCAAATTTCCATCAA+TGG 0.450794 5_4:+9227457 None:intergenic
TGCTTGACCATCATAAGAAC+CGG 0.451683 5_4:+9223209 None:intergenic
TTATTAGGGTTATTTGTAGC+AGG 0.457403 5_4:+9221778 None:intergenic
AAAGTAAGGTGGCTCTTCTC+AGG 0.459176 5_4:+9220011 None:intergenic
ATGACATACCTGATTCTTGA+AGG 0.464229 5_4:+9228166 None:intergenic
AAGATGTCACTACACTTGAT+TGG 0.465443 5_4:-9223704 Msa0835810:CDS
ATTAACAAATGCCCCATTGA+TGG 0.468955 5_4:-9227470 Msa0835810:CDS
AAGGGAGAAAGAACGTGAAA+AGG 0.469916 5_4:-9227060 Msa0835810:CDS
AAATCAGATCAGTAGAGAAA+TGG 0.476182 5_4:-9226991 Msa0835810:CDS
AACATGTATCATGGTGTCAT+TGG 0.480498 5_4:+9222641 None:intergenic
TGATGGAAATTTGGTACCAC+CGG 0.482954 5_4:-9227453 Msa0835810:CDS
TGAAGTTAATTGTATCAAAT+GGG 0.484187 5_4:-9222159 Msa0835810:CDS
TACCAACCCTGATGCAAGAA+AGG 0.485782 5_4:+9225859 None:intergenic
GGATTTGTCATGGGACCCAC+TGG 0.485949 5_4:+9220187 None:intergenic
CAGGATCCTTTCTTGCATCA+GGG 0.486170 5_4:-9225865 Msa0835810:intron
GACAAGAGAAAAGGAAAGAC+AGG 0.487085 5_4:-9227084 Msa0835810:CDS
GTACATATGTCCATGGGCTC+TGG 0.487988 5_4:+9226070 None:intergenic
CTTAGGTCTGTGCTTGTGCA+TGG 0.489170 5_4:-9225895 Msa0835810:intron
TTAGTTAATGACGGTTGTAA+AGG 0.490788 5_4:-9228445 Msa0835810:five_prime_UTR
AAACTAATTCATAGCTTGAA+TGG 0.491309 5_4:-9220522 Msa0835810:CDS
ATACAGTTCTGTCAATATCA+TGG 0.492139 5_4:+9219956 None:intergenic
TATATTTATGGATTTGTCAT+GGG 0.493957 5_4:+9220178 None:intergenic
TTCTTACTGGAAGTTTCGAT+GGG 0.494004 5_4:-9222893 Msa0835810:CDS
CCCGTTCTCTTCAACGAGCA+TGG 0.495827 5_4:-9228232 Msa0835810:exon
TCTCTGAAGTGGAATAAGAA+AGG 0.497421 5_4:-9222924 Msa0835810:CDS
TGTAGTAGTTTAGTTAATGA+CGG 0.498842 5_4:-9228454 None:intergenic
AATATATGGTCCTTGAATGA+TGG 0.499260 5_4:-9220161 Msa0835810:CDS
TTGAGCAACTAGCCAAAGTA+AGG 0.500908 5_4:+9219997 None:intergenic
TTGACTCTACCGTAAAGCTA+TGG 0.503121 5_4:-9220560 Msa0835810:CDS
TTCCACTTCAGAGAAAATAT+GGG 0.504853 5_4:+9222933 None:intergenic
ATTGAGTTCGACGGAGGTGA+TGG 0.504919 5_4:+9228206 None:intergenic
ACTGGCTAAATACTCACCAT+TGG 0.504998 5_4:+9220205 None:intergenic
GCTTGTGCATGGAGTCCTAC+AGG 0.508560 5_4:-9225884 Msa0835810:CDS
TATTTGTAGCAGGACCAGTT+GGG 0.508917 5_4:+9221788 None:intergenic
AAGCTATGGGATGTGGAACT+CGG 0.509332 5_4:-9220546 Msa0835810:CDS
GGTCTCAGATCAAGAAGATA+AGG 0.514110 5_4:-9226970 Msa0835810:CDS
CCCTAATAAGAAATTGGTGT+TGG 0.516897 5_4:-9221764 Msa0835810:CDS
GAGGAGGATGGAGCATTTGG+AGG 0.517057 5_4:-9226822 Msa0835810:intron
ATATATTTATGGATTTGTCA+TGG 0.524784 5_4:+9220177 None:intergenic
AAGAAGAAGAAAACGACAGA+GGG 0.524916 5_4:-9227153 Msa0835810:CDS
TCTTGTTACATTTGTTCAGA+AGG 0.525010 5_4:-9227426 Msa0835810:CDS
GAGGGGACACTACTTGCAAC+CGG 0.525092 5_4:-9223228 Msa0835810:CDS
TACCGTAAAGCTATGGGATG+TGG 0.533670 5_4:-9220553 Msa0835810:CDS
CCGCGGTCTGACAAGAGAAA+AGG 0.535025 5_4:-9227093 Msa0835810:CDS
ATAAGAAATTGGTGTTGGCT+AGG 0.535443 5_4:-9221759 Msa0835810:intron
AATCTTGCAAACATGTATCA+TGG 0.536038 5_4:+9222632 None:intergenic
GAGAAAAGGAAAGACAGGAA+AGG 0.536296 5_4:-9227079 Msa0835810:CDS
TTCCCGGATGAAGAGGTTCA+AGG 0.538031 5_4:+9228421 None:intergenic
CTTGTTACATTTGTTCAGAA+GGG 0.539198 5_4:-9227425 Msa0835810:CDS
CGATGGGTCTGCAATTGTAT+GGG 0.539354 5_4:-9222877 Msa0835810:CDS
GGGACTACAGTTCTTGGAGA+TGG 0.540425 5_4:-9227405 Msa0835810:CDS
TAAGGTTAATGTAAAGCTTG+AGG 0.542812 5_4:-9226841 Msa0835810:CDS
GCCCTTGAACCTCTTCATCC+GGG 0.544566 5_4:-9228423 Msa0835810:five_prime_UTR
AATGTAAAGCTTGAGGAGGA+TGG 0.549555 5_4:-9226834 Msa0835810:CDS
TGTCAACGCGGCAGAAGACA+CGG 0.553620 5_4:+9228360 None:intergenic
TGATGTTGTACATATGTCCA+TGG 0.557105 5_4:+9226063 None:intergenic
TTGTATAGGACCAGAGCCCA+TGG 0.557449 5_4:-9226080 Msa0835810:intron
AAGAAAGGGCCTACCATTAG+CGG 0.557736 5_4:+9223176 None:intergenic
ACGTGAAAAGGATAAAGAGA+AGG 0.558461 5_4:-9227048 Msa0835810:CDS
ATGTGTATAAACCTGGTGCC+CGG 0.558730 5_4:+9222581 None:intergenic
TGACTCTACCGTAAAGCTAT+GGG 0.561117 5_4:-9220559 Msa0835810:CDS
TTATTTGTAGCAGGACCAGT+TGG 0.561581 5_4:+9221787 None:intergenic
AGGAGATATATGCTATCAGA+TGG 0.562544 5_4:-9221813 Msa0835810:CDS
ATTAAAACATACAACGGCAA+TGG 0.567817 5_4:-9220131 Msa0835810:CDS
ATAATCATTAGTAACTAGTA+GGG 0.569724 5_4:-9219847 Msa0835810:three_prime_UTR
GTTGGTGTTGCAGCACATCA+GGG 0.572151 5_4:-9223748 Msa0835810:CDS
GATGGAAATTTGGTACCACC+GGG 0.577174 5_4:-9227452 Msa0835810:CDS
TGCAACACCAACACAGTCGA+AGG 0.580347 5_4:+9223759 None:intergenic
TTACAACGGAGTTACAAGAA+TGG 0.580824 5_4:+9219879 None:intergenic
GAGGTCTGTTGGAACAAGGA+GGG 0.582876 5_4:-9220098 Msa0835810:CDS
ACTATTGCATTCAGCCCCAA+TGG 0.585345 5_4:-9220221 Msa0835810:CDS
TGGAAATTTGGTACCACCGG+GGG 0.587763 5_4:-9227450 Msa0835810:CDS
TTTGGAAGGGCATAAGTCAG+AGG 0.594030 5_4:-9225999 Msa0835810:intron
TACCCAATGAGAACATACCT+TGG 0.597919 5_4:+9219733 None:intergenic
AGCTATGGGATGTGGAACTC+GGG 0.599942 5_4:-9220545 Msa0835810:CDS
TCCCGGATGAAGAGGTTCAA+GGG 0.601305 5_4:+9228422 None:intergenic
TATATAATTCCCGGATGAAG+AGG 0.602089 5_4:+9228414 None:intergenic
AAAACATACAACGGCAATGG+AGG 0.602122 5_4:-9220128 Msa0835810:CDS
CATGATAACGATTATACAGA+CGG 0.602538 5_4:+9219785 None:intergenic
GCCATGCTCGTTGAAGAGAA+CGG 0.607808 5_4:+9228231 None:intergenic
TTTGTGTTTGGGAATGAGGG+TGG 0.611504 5_4:-9227494 Msa0835810:CDS
CGAGGCCAGTAATGAACCTG+TGG 0.613287 5_4:+9222133 None:intergenic
ACGCGGCAGAAGACACGGGT+GGG 0.622747 5_4:+9228365 None:intergenic
GAACGACCCTTCGACTGTGT+TGG 0.624305 5_4:-9223766 Msa0835810:CDS
TTCAGATGATAACACTGCAA+AGG 0.624464 5_4:-9222108 Msa0835810:intron
TGTATCAAATGGGATCCCAC+AGG 0.627567 5_4:-9222149 Msa0835810:CDS
GACGAGATAATTGAGTTCGA+CGG 0.629252 5_4:+9228197 None:intergenic
GTCAACGCGGCAGAAGACAC+GGG 0.629708 5_4:+9228361 None:intergenic
GATGTTGTACATATGTCCAT+GGG 0.631848 5_4:+9226064 None:intergenic
AATGGTGAGTATTTAGCCAG+TGG 0.632034 5_4:-9220203 Msa0835810:CDS
AAGATCATTAAAACATACAA+CGG 0.633785 5_4:-9220137 Msa0835810:CDS
ATGGTGAGTATTTAGCCAGT+GGG 0.634149 5_4:-9220202 Msa0835810:CDS
TGAGGTCTGTTGGAACAAGG+AGG 0.635956 5_4:-9220099 Msa0835810:CDS
AGCAACTAGCCAAAGTAAGG+TGG 0.639749 5_4:+9220000 None:intergenic
AACGCGGCAGAAGACACGGG+TGG 0.640813 5_4:+9228364 None:intergenic
GAGATAATTGAGTTCGACGG+AGG 0.641503 5_4:+9228200 None:intergenic
GGTTAATGTAAAGCTTGAGG+AGG 0.643371 5_4:-9226838 Msa0835810:CDS
GAGTACATTAAGCAAACACA+AGG 0.647125 5_4:-9222958 Msa0835810:CDS
TTGGTGTTGCAGCACATCAG+GGG 0.650194 5_4:-9223747 Msa0835810:CDS
ACAAATGTAACAAGAGCCCC+CGG 0.650451 5_4:+9227434 None:intergenic
GATGCAAGAAAGGATCCTGT+AGG 0.654010 5_4:+9225869 None:intergenic
ATTATGCCATAAACTTACAA+CGG 0.661222 5_4:+9219865 None:intergenic
TTCATAGCTTGAATGGACAC+AGG 0.666219 5_4:-9220515 Msa0835810:intron
GCAACACCAACACAGTCGAA+GGG 0.676096 5_4:+9223760 None:intergenic
TCTGCTGCCAGATAGCTCCA+AGG 0.680870 5_4:-9219750 Msa0835810:three_prime_UTR
AAAGAAGAAGAAAACGACAG+AGG 0.683677 5_4:-9227154 Msa0835810:CDS
AAAGAGCATGATGGTGACCG+CGG 0.685210 5_4:-9227110 Msa0835810:CDS
GAGGCCAGTAATGAACCTGT+GGG 0.694911 5_4:+9222134 None:intergenic
AGTGTTATCATCTGAACACG+AGG 0.704222 5_4:+9222115 None:intergenic
AGAAGAAGAAAACGACAGAG+GGG 0.711456 5_4:-9227152 Msa0835810:CDS
TGGCTAAATACTCACCATTG+GGG 0.715065 5_4:+9220207 None:intergenic
ATGGAAATTTGGTACCACCG+GGG 0.720037 5_4:-9227451 Msa0835810:CDS
GTGTGCTGTGTGTGTCAACG+CGG 0.735841 5_4:+9228348 None:intergenic
TCTGACTTAGGAAATTCACA+TGG 0.743110 5_4:+9226031 None:intergenic
GTACCAAATTTCCATCAATG+GGG 0.758288 5_4:+9227459 None:intergenic
AGTACATTAAGCAAACACAA+GGG 0.758457 5_4:-9222957 Msa0835810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAAAAAATTAAAATTTT+TGG + chr5_4:9224837-9224856 None:intergenic 0.0%
!!! TTTAATTTTTTTTAAATTTA+TGG - chr5_4:9224842-9224861 Msa0835810:intron 0.0%
!!! ATTTTTCTTTTTTTCTTTTT+TGG + chr5_4:9219929-9219948 None:intergenic 10.0%
!! TAAAATAAATAAAATTTGTC+AGG - chr5_4:9224729-9224748 Msa0835810:intron 10.0%
!!! TACTTTTGATTTTTTAATTT+CGG - chr5_4:9225464-9225483 Msa0835810:intron 10.0%
!! AAACAAATATTTCAAAAGTA+TGG + chr5_4:9221742-9221761 None:intergenic 15.0%
!! TTTATTAGAACAATTCAATT+AGG - chr5_4:9222909-9222928 Msa0835810:CDS 15.0%
!! ATATGAATAAAATAGGTTAT+TGG - chr5_4:9223718-9223737 Msa0835810:CDS 15.0%
!!! TCAAATCTAAATTCATTTTA+AGG - chr5_4:9223745-9223764 Msa0835810:CDS 15.0%
!!! ATAAATTTGAAAGGTATTTT+AGG - chr5_4:9223790-9223809 Msa0835810:CDS 15.0%
!! TGAAAGAAATAAAAGATAAT+AGG - chr5_4:9224100-9224119 Msa0835810:intron 15.0%
!! AAAAGATAATAGGATATAAA+AGG - chr5_4:9224110-9224129 Msa0835810:intron 15.0%
!! TTTACTACTAATAAAATGTA+AGG + chr5_4:9224136-9224155 None:intergenic 15.0%
!!! AAAAAACTGATTTTTAAAGT+AGG - chr5_4:9224807-9224826 Msa0835810:intron 15.0%
!!! AAAAACTGATTTTTAAAGTA+GGG - chr5_4:9224808-9224827 Msa0835810:intron 15.0%
!! ACTAAGATTTATCAAAATAA+AGG + chr5_4:9225063-9225082 None:intergenic 15.0%
!!! ATTATATTGATTTTTTAAGC+TGG - chr5_4:9225117-9225136 Msa0835810:intron 15.0%
!! TCTATAAAATAATTTCTTGA+TGG + chr5_4:9226142-9226161 None:intergenic 15.0%
!!! AGTTAATTTCACAAATATTT+TGG + chr5_4:9226194-9226213 None:intergenic 15.0%
!!! ATAAGTATATTCATGATTTT+AGG - chr5_4:9226268-9226287 Msa0835810:intron 15.0%
!!! TAAGTATATTCATGATTTTA+GGG - chr5_4:9226269-9226288 Msa0835810:intron 15.0%
!! ATATTGTATTTATAGTTGTT+GGG + chr5_4:9226907-9226926 None:intergenic 15.0%
!! TTAGAAAGTTATGATAAATT+AGG + chr5_4:9227419-9227438 None:intergenic 15.0%
!!! ATTCTTTCCTTAATCTTTTT+CGG - chr5_4:9220089-9220108 Msa0835810:CDS 20.0%
!!! AAACAATATAGTGTTTTTTG+TGG - chr5_4:9220504-9220523 Msa0835810:intron 20.0%
!! AGTGAATACAAGAATAAAAA+AGG + chr5_4:9220841-9220860 None:intergenic 20.0%
!!! ATAAAAATCTAGTAATGGAT+GGG + chr5_4:9221705-9221724 None:intergenic 20.0%
!!! AAATATTTCAAAAGTATGGT+TGG + chr5_4:9221738-9221757 None:intergenic 20.0%
!! CGATAAAAAAAAAAATACTC+AGG + chr5_4:9221922-9221941 None:intergenic 20.0%
!!! AAGTTTTCATTCAATTGTAT+AGG - chr5_4:9222095-9222114 Msa0835810:intron 20.0%
!! TTAATCTCAATTTAGCAATA+AGG - chr5_4:9222537-9222556 Msa0835810:intron 20.0%
!!! ACAGAAAATAAAGATTGTTT+TGG - chr5_4:9222628-9222647 Msa0835810:CDS 20.0%
!! AGAAAATCATTCATAAGAAT+AGG + chr5_4:9222724-9222743 None:intergenic 20.0%
!! TTGAATTGTTCTAATAAACA+TGG + chr5_4:9222907-9222926 None:intergenic 20.0%
!! GAATTAAAACATACATAAAC+TGG - chr5_4:9223170-9223189 Msa0835810:intron 20.0%
!! TAGGAACACTATTATTAAAT+AGG - chr5_4:9223809-9223828 Msa0835810:CDS 20.0%
!!! TTTATGTCGTTTAAAACTAA+TGG - chr5_4:9223909-9223928 Msa0835810:intron 20.0%
!! AAAAGCAATCAATTCAAAAA+GGG + chr5_4:9223968-9223987 None:intergenic 20.0%
!! AAAAAGCAATCAATTCAAAA+AGG + chr5_4:9223969-9223988 None:intergenic 20.0%
!! AAAAATAGACAAAAGTTGTT+AGG + chr5_4:9224023-9224042 None:intergenic 20.0%
!!! CTTTTGTCTATTTTTTTATC+AGG - chr5_4:9224028-9224047 Msa0835810:intron 20.0%
!! AGTAAAATATATATGATGCT+TGG - chr5_4:9224150-9224169 Msa0835810:intron 20.0%
!! GAAATAGATAACAATAACAA+GGG + chr5_4:9224238-9224257 None:intergenic 20.0%
!! AGAAATAGATAACAATAACA+AGG + chr5_4:9224239-9224258 None:intergenic 20.0%
!! GAAAATAAGTAGATTAATAG+AGG - chr5_4:9224265-9224284 Msa0835810:intron 20.0%
!!! AGGATAATTTTGTTCTTATT+AGG - chr5_4:9224667-9224686 Msa0835810:intron 20.0%
!!! GGATAATTTTGTTCTTATTA+GGG - chr5_4:9224668-9224687 Msa0835810:intron 20.0%
!!! TTTAAGTCTTAAATGCATTT+TGG + chr5_4:9224869-9224888 None:intergenic 20.0%
!!! CATTATTTTAATCATGTGTT+CGG - chr5_4:9225186-9225205 Msa0835810:intron 20.0%
!!! ATTATTTTAATCATGTGTTC+GGG - chr5_4:9225187-9225206 Msa0835810:intron 20.0%
!! ATTGTATAATAAATGCAGTA+GGG + chr5_4:9225710-9225729 None:intergenic 20.0%
!! TATTGTATAATAAATGCAGT+AGG + chr5_4:9225711-9225730 None:intergenic 20.0%
!!! TTAGCATTTATTACATGTTT+TGG - chr5_4:9225884-9225903 Msa0835810:CDS 20.0%
!! TGAAGTTAATTGTATCAAAT+GGG - chr5_4:9226030-9226049 Msa0835810:CDS 20.0%
!!! TAAATAATGGTTTTTTTCGT+AGG - chr5_4:9226356-9226375 Msa0835810:intron 20.0%
!! AAATAACCCTAATAAGAAAT+TGG - chr5_4:9226419-9226438 Msa0835810:intron 20.0%
!!! ACTCTAAAAATAGAATTTGT+GGG - chr5_4:9226766-9226785 Msa0835810:intron 20.0%
!! CATATTGTATTTATAGTTGT+TGG + chr5_4:9226908-9226927 None:intergenic 20.0%
!! ACTTTATATGAAAAACTACA+CGG + chr5_4:9227025-9227044 None:intergenic 20.0%
!!! AAAGTTGTTTAGTTTGATTA+TGG - chr5_4:9227040-9227059 Msa0835810:CDS 20.0%
!! TGATAAAAACTAATACTTTG+AGG - chr5_4:9227184-9227203 Msa0835810:CDS 20.0%
!!! ATAAGAATTTGAAGAGTTTT+AGG - chr5_4:9227452-9227471 Msa0835810:CDS 20.0%
!!! ATTTTTCTCTTAATACTAGA+CGG - chr5_4:9227553-9227572 Msa0835810:intron 20.0%
!! TTAAGTATGAAATGAAAGTT+AGG + chr5_4:9227821-9227840 None:intergenic 20.0%
!! AACTTCTATTATAGTTTATC+TGG - chr5_4:9227848-9227867 Msa0835810:intron 20.0%
!! TATATTTATGGATTTGTCAT+GGG + chr5_4:9228014-9228033 None:intergenic 20.0%
!! ATATATTTATGGATTTGTCA+TGG + chr5_4:9228015-9228034 None:intergenic 20.0%
!! ATGACAAATCCATAAATATA+TGG - chr5_4:9228014-9228033 Msa0835810:intron 20.0%
!! AAGATCATTAAAACATACAA+CGG - chr5_4:9228052-9228071 Msa0835810:intron 20.0%
!! ATAATCATTAGTAACTAGTA+GGG - chr5_4:9228342-9228361 Msa0835810:five_prime_UTR 20.0%
!!! TTTTTCTTTTTTGGTGTGAA+GGG + chr5_4:9219920-9219939 None:intergenic 25.0%
!!! TTTTTTCTTTTTTGGTGTGA+AGG + chr5_4:9219921-9219940 None:intergenic 25.0%
!! TGTTCGTTAATTGATTTCAT+TGG - chr5_4:9220365-9220384 Msa0835810:intron 25.0%
! ATATAAGGTCAATCTAAACT+CGG + chr5_4:9220420-9220439 None:intergenic 25.0%
!!! TAATTTTGCTGTTCTTGTTA+TGG - chr5_4:9220527-9220546 Msa0835810:CDS 25.0%
! AAAAAGAAAGACAAGGTTAA+TGG - chr5_4:9221268-9221287 Msa0835810:intron 25.0%
! AAAGAAGATGCTAAAAAAGA+AGG - chr5_4:9221298-9221317 Msa0835810:intron 25.0%
! AAAAAAGAAGGTAAGGTTAA+TGG - chr5_4:9221310-9221329 Msa0835810:intron 25.0%
! AAAATGAGAAAAACTAACAG+AGG + chr5_4:9221532-9221551 None:intergenic 25.0%
!!! TAAAAATCTAGTAATGGATG+GGG + chr5_4:9221704-9221723 None:intergenic 25.0%
!! GATAAAAATCTAGTAATGGA+TGG + chr5_4:9221706-9221725 None:intergenic 25.0%
! GATGGATAAAAATCTAGTAA+TGG + chr5_4:9221710-9221729 None:intergenic 25.0%
! ACTCAGGATATTGAATAATA+AGG + chr5_4:9221906-9221925 None:intergenic 25.0%
!! ACTTTTCAATCATCTTTTGA+AGG + chr5_4:9222079-9222098 None:intergenic 25.0%
! TAGCAATAAGGTTAATATCT+AGG - chr5_4:9222549-9222568 Msa0835810:intron 25.0%
!! GACTATTTTGTTAACTATCA+TGG + chr5_4:9222751-9222770 None:intergenic 25.0%
!! AATCGTTTGTTAGTGATATT+AGG + chr5_4:9222867-9222886 None:intergenic 25.0%
! ACAAATAGCATAATCAATAG+TGG - chr5_4:9223148-9223167 Msa0835810:intron 25.0%
! ACCTGTCATATGAATAAAAT+AGG - chr5_4:9223711-9223730 Msa0835810:CDS 25.0%
!! ACCTATTTTATTCATATGAC+AGG + chr5_4:9223715-9223734 None:intergenic 25.0%
! AAAGCAATCAATTCAAAAAG+GGG + chr5_4:9223967-9223986 None:intergenic 25.0%
!! TTCAACAGTTTTTAATGACA+TGG + chr5_4:9224084-9224103 None:intergenic 25.0%
!! TTGTTATCATCTGAACTTTT+AGG - chr5_4:9224338-9224357 Msa0835810:intron 25.0%
!! TAATTTTGTTCTTATTAGGG+AGG - chr5_4:9224671-9224690 Msa0835810:intron 25.0%
! TCCAGATAAAAGTTAAATAG+AGG - chr5_4:9224780-9224799 Msa0835810:intron 25.0%
! CCAGATAAAAGTTAAATAGA+GGG - chr5_4:9224781-9224800 Msa0835810:intron 25.0%
!! TTTTGATAAATCTTAGTGTC+TGG - chr5_4:9225066-9225085 Msa0835810:intron 25.0%
!!! TTATTTTAATCATGTGTTCG+GGG - chr5_4:9225188-9225207 Msa0835810:intron 25.0%
! AAAGTAGAAGATCATAAACA+TGG + chr5_4:9225450-9225469 None:intergenic 25.0%
!!! TTTTAATTTCGGCTTTGTTT+AGG - chr5_4:9225475-9225494 Msa0835810:intron 25.0%
! TTGTATAATAAATGCAGTAG+GGG + chr5_4:9225709-9225728 None:intergenic 25.0%
! GTCAGATACATTAGAAATTT+GGG + chr5_4:9225802-9225821 None:intergenic 25.0%
! AGTCAGATACATTAGAAATT+TGG + chr5_4:9225803-9225822 None:intergenic 25.0%
!! ATTCCACTAAACTAGTTTAT+TGG - chr5_4:9225915-9225934 Msa0835810:intron 25.0%
! GTGAAGTTAATTGTATCAAA+TGG - chr5_4:9226029-9226048 Msa0835810:CDS 25.0%
! TTTGGTAAAAAGACATTTAC+TGG + chr5_4:9226176-9226195 None:intergenic 25.0%
! AAACATGAATATTCCCTAAT+TGG + chr5_4:9226309-9226328 None:intergenic 25.0%
!!! TTCATGTTTTTGAACTATAC+AGG - chr5_4:9226320-9226339 Msa0835810:intron 25.0%
! TTGTTGGGAAATCTAAATAA+TGG - chr5_4:9226343-9226362 Msa0835810:intron 25.0%
! AATTAAAGTATAGTGCTCTA+AGG - chr5_4:9226597-9226616 Msa0835810:intron 25.0%
! ATTAAAGTATAGTGCTCTAA+GGG - chr5_4:9226598-9226617 Msa0835810:intron 25.0%
!! CACTCTAAAAATAGAATTTG+TGG - chr5_4:9226765-9226784 Msa0835810:intron 25.0%
! TTGACAGCTTAAAAACATTT+GGG + chr5_4:9226870-9226889 None:intergenic 25.0%
! ATTGACAGCTTAAAAACATT+TGG + chr5_4:9226871-9226890 None:intergenic 25.0%
!!! GCTTGTTGTCTTTTTAAATT+TGG - chr5_4:9227090-9227109 Msa0835810:CDS 25.0%
!! AATTTTGTAGAATGTGATGA+GGG + chr5_4:9227348-9227367 None:intergenic 25.0%
! AAACTAATTCATAGCTTGAA+TGG - chr5_4:9227667-9227686 Msa0835810:intron 25.0%
!! AGCTTTTAATGTTATATCAG+TGG - chr5_4:9227710-9227729 Msa0835810:intron 25.0%
! ATTCAAGGACCATATATTTA+TGG + chr5_4:9228026-9228045 None:intergenic 25.0%
! AACTGTATTGTTAGAAAAAC+AGG + chr5_4:9228131-9228150 None:intergenic 25.0%
!! ATATTGACAGAACTGTATTT+TGG - chr5_4:9228238-9228257 Msa0835810:five_prime_UTR 25.0%
! CAAGAATGGTTAAAACTTAA+AGG + chr5_4:9228299-9228318 None:intergenic 25.0%
! ATTATGCCATAAACTTACAA+CGG + chr5_4:9228327-9228346 None:intergenic 25.0%
! CATAATCATTAGTAACTAGT+AGG - chr5_4:9228341-9228360 Msa0835810:five_prime_UTR 25.0%
TTTCAATTCATTCAAGCCAA+CGG - chr5_4:9220164-9220183 Msa0835810:CDS 30.0%
GCTGAAAAATTGATACGATT+TGG - chr5_4:9220228-9220247 Msa0835810:CDS 30.0%
TGTTATGGCCTTCTTATAAA+GGG + chr5_4:9220604-9220623 None:intergenic 30.0%
ATGTTATGGCCTTCTTATAA+AGG + chr5_4:9220605-9220624 None:intergenic 30.0%
TCTTGTTACATTTGTTCAGA+AGG - chr5_4:9220763-9220782 Msa0835810:intron 30.0%
CTTGTTACATTTGTTCAGAA+GGG - chr5_4:9220764-9220783 Msa0835810:intron 30.0%
!! TTTTTAAGCTCTTCATACCT+GGG - chr5_4:9220892-9220911 Msa0835810:intron 30.0%
! GGTTTCATGTTGATAAATGT+TGG - chr5_4:9220913-9220932 Msa0835810:intron 30.0%
! TTTTTCGTTCTTACAACCTT+TGG - chr5_4:9220967-9220986 Msa0835810:intron 30.0%
! TCTTTTGTGATAAGATCCAA+AGG + chr5_4:9220986-9221005 None:intergenic 30.0%
AAATCAGATCAGTAGAGAAA+TGG - chr5_4:9221198-9221217 Msa0835810:intron 30.0%
GATCAAGAAGATAAGGTTAA+TGG - chr5_4:9221226-9221245 Msa0835810:intron 30.0%
AGATGCTAAAAAGAAAGACA+AGG - chr5_4:9221261-9221280 Msa0835810:intron 30.0%
AGATGCTAAAAAAGAAGGTA+AGG - chr5_4:9221303-9221322 Msa0835810:intron 30.0%
! TGGTGCTAAAAAAGAAGATA+AGG - chr5_4:9221330-9221349 Msa0835810:intron 30.0%
TAAGGTTAATGTAAAGCTTG+AGG - chr5_4:9221348-9221367 Msa0835810:intron 30.0%
ATAAACCAAATCAGTTGAAC+AGG + chr5_4:9221399-9221418 None:intergenic 30.0%
ATTGTATGACATCGATACTT+GGG + chr5_4:9221501-9221520 None:intergenic 30.0%
AATTGTATGACATCGATACT+TGG + chr5_4:9221502-9221521 None:intergenic 30.0%
!! AAAAATCTAGTAATGGATGG+GGG + chr5_4:9221703-9221722 None:intergenic 30.0%
! ATTTCAAAAGTATGGTTGGA+AGG + chr5_4:9221734-9221753 None:intergenic 30.0%
AATCTTAAATCTGACAGAAG+TGG + chr5_4:9221844-9221863 None:intergenic 30.0%
GTTGCAACTTACAAGTAAAT+TGG + chr5_4:9221965-9221984 None:intergenic 30.0%
AAAATTGTCACATCTGACTT+AGG + chr5_4:9222173-9222192 None:intergenic 30.0%
! TAAGTCAGATGTGACAATTT+TGG - chr5_4:9222172-9222191 Msa0835810:intron 30.0%
! AATCCTTCATGTTTGTGTTT+TGG - chr5_4:9222227-9222246 Msa0835810:intron 30.0%
AAACCAAAACACAAACATGA+AGG + chr5_4:9222233-9222252 None:intergenic 30.0%
!!! AGATTGTTTTGGAAAAGATC+AGG - chr5_4:9222639-9222658 Msa0835810:CDS 30.0%
AAGATTATTAGACCACCTAA+GGG + chr5_4:9222824-9222843 None:intergenic 30.0%
AAAGATTATTAGACCACCTA+AGG + chr5_4:9222825-9222844 None:intergenic 30.0%
!! CTAATAAACATGGTTAGTCT+AGG + chr5_4:9222897-9222916 None:intergenic 30.0%
CTCACGAAATCATGTTTATA+TGG - chr5_4:9222967-9222986 Msa0835810:CDS 30.0%
AGCTAAATCTCTTAGAGATT+AGG + chr5_4:9223112-9223131 None:intergenic 30.0%
! AAACATAAGGGTTACGATTT+TGG + chr5_4:9223259-9223278 None:intergenic 30.0%
AAAATCGTAACCCTTATGTT+TGG - chr5_4:9223258-9223277 Msa0835810:intron 30.0%
! GTGTCAATTTCATCACATTT+TGG + chr5_4:9223573-9223592 None:intergenic 30.0%
AAATGAGAATATTGCGCAAA+TGG + chr5_4:9223649-9223668 None:intergenic 30.0%
TCGAATATAAGCAAGTTTAG+TGG + chr5_4:9223870-9223889 None:intergenic 30.0%
! AACTTGCTTATATTCGAAAC+TGG - chr5_4:9223873-9223892 Msa0835810:intron 30.0%
ATGGAAACATAGAATAGATG+AGG - chr5_4:9223928-9223947 Msa0835810:intron 30.0%
TGGAAACATAGAATAGATGA+GGG - chr5_4:9223929-9223948 Msa0835810:intron 30.0%
AGTAGATTAATAGAGGACAT+TGG - chr5_4:9224272-9224291 Msa0835810:intron 30.0%
! GACATCTTTATTCTTTTCAG+TGG + chr5_4:9224473-9224492 None:intergenic 30.0%
GAAAAATCAGAAAACTGAAC+AGG + chr5_4:9224572-9224591 None:intergenic 30.0%
GTGGGAAAAAGAAATGTATA+AGG - chr5_4:9224647-9224666 Msa0835810:intron 30.0%
!! CCCTCTATTTAACTTTTATC+TGG + chr5_4:9224784-9224803 None:intergenic 30.0%
TCGTACTTACTTATCTCTTA+TGG - chr5_4:9224905-9224924 Msa0835810:intron 30.0%
!! ATAAAGGTATCACTCAAAGA+AGG + chr5_4:9225047-9225066 None:intergenic 30.0%
TTCCACTTCAGAGAAAATAT+GGG + chr5_4:9225259-9225278 None:intergenic 30.0%
ATTCCACTTCAGAGAAAATA+TGG + chr5_4:9225260-9225279 None:intergenic 30.0%
AAAGGAGATTATCTTCTTAC+TGG - chr5_4:9225283-9225302 Msa0835810:intron 30.0%
!! CAACAATTTGATTTTCACAG+CGG - chr5_4:9225358-9225377 Msa0835810:intron 30.0%
AATCTTGCAAACATGTATCA+TGG + chr5_4:9225560-9225579 None:intergenic 30.0%
ATGATACATGTTTGCAAGAT+TGG - chr5_4:9225559-9225578 Msa0835810:intron 30.0%
ACAAGTTATGTGTATAAACC+TGG + chr5_4:9225618-9225637 None:intergenic 30.0%
TGAATTATTATTCTGTGCAC+TGG - chr5_4:9225640-9225659 Msa0835810:intron 30.0%
GCTGAGTTAACTATTCAAAT+TGG - chr5_4:9225742-9225761 Msa0835810:intron 30.0%
GAGTTAACTATTCAAATTGG+TGG - chr5_4:9225745-9225764 Msa0835810:intron 30.0%
TTCTAATGTATCTGACTACT+TGG - chr5_4:9225806-9225825 Msa0835810:intron 30.0%
TCTAATGTATCTGACTACTT+GGG - chr5_4:9225807-9225826 Msa0835810:intron 30.0%
! GAACCAATAAACTAGTTTAG+TGG + chr5_4:9225921-9225940 None:intergenic 30.0%
! TGTTTCTCGTTTTGTAGATA+TGG - chr5_4:9226232-9226251 Msa0835810:intron 30.0%
! TTTTGAACTATACAGGTTGT+TGG - chr5_4:9226327-9226346 Msa0835810:intron 30.0%
TTTGAACTATACAGGTTGTT+GGG - chr5_4:9226328-9226347 Msa0835810:intron 30.0%
TTATTAGGGTTATTTGTAGC+AGG + chr5_4:9226414-9226433 None:intergenic 30.0%
CCAACACCAATTTCTTATTA+GGG + chr5_4:9226428-9226447 None:intergenic 30.0%
AAATAGTTTCTCAAAGTGTG+CGG + chr5_4:9226725-9226744 None:intergenic 30.0%
AAAATAGAATTTGTGGGTGA+CGG - chr5_4:9226772-9226791 Msa0835810:intron 30.0%
TGTTCGTAATTTCTTCTTTG+GGG + chr5_4:9226826-9226845 None:intergenic 30.0%
GTGTTCGTAATTTCTTCTTT+GGG + chr5_4:9226827-9226846 None:intergenic 30.0%
TGTGTTCGTAATTTCTTCTT+TGG + chr5_4:9226828-9226847 None:intergenic 30.0%
TGACAGCTTAAAAACATTTG+GGG + chr5_4:9226869-9226888 None:intergenic 30.0%
TACAATATGATTATCAACCC+CGG - chr5_4:9226919-9226938 Msa0835810:CDS 30.0%
!! TTTAGTTTGATTATGGTGAC+CGG - chr5_4:9227047-9227066 Msa0835810:CDS 30.0%
TACTAGCTAATGTGTGATAT+TGG - chr5_4:9227135-9227154 Msa0835810:CDS 30.0%
! CAAGGTTTAAAACAATGTAG+TGG + chr5_4:9227270-9227289 None:intergenic 30.0%
!! ATATTTTGAACAGTGAGTAG+TGG + chr5_4:9227295-9227314 None:intergenic 30.0%
! GAATTTTGTAGAATGTGATG+AGG + chr5_4:9227349-9227368 None:intergenic 30.0%
ATATCAGTGGCAAGAATATA+TGG - chr5_4:9227723-9227742 Msa0835810:intron 30.0%
ATTATAGTTTATCTGGTGTC+TGG - chr5_4:9227855-9227874 Msa0835810:intron 30.0%
!!! TTGGTTTTGACTGGTTTATT+TGG - chr5_4:9227924-9227943 Msa0835810:intron 30.0%
AATATATGGTCCTTGAATGA+TGG - chr5_4:9228028-9228047 Msa0835810:intron 30.0%
ATTAAAACATACAACGGCAA+TGG - chr5_4:9228058-9228077 Msa0835810:intron 30.0%
! TAACAATACAGTTTGCGTTT+TGG - chr5_4:9228138-9228157 Msa0835810:intron 30.0%
ATACAGTTCTGTCAATATCA+TGG + chr5_4:9228236-9228255 None:intergenic 30.0%
! CATGATAACGATTATACAGA+CGG + chr5_4:9228407-9228426 None:intergenic 30.0%
TATATAATTCCCGGATGAAG+AGG + chr5_4:9219778-9219797 None:intergenic 35.0%
TCTTCATCCGGGAATTATAT+AGG - chr5_4:9219777-9219796 Msa0835810:three_prime_UTR 35.0%
!!! TTTTTTGGTGTGAAGGGTTT+GGG + chr5_4:9219914-9219933 None:intergenic 35.0%
ATGACATACCTGATTCTTGA+AGG + chr5_4:9220026-9220045 None:intergenic 35.0%
TGGTTGACCGAAAAAGATTA+AGG + chr5_4:9220099-9220118 None:intergenic 35.0%
AAGTCTAAACCCTTGACATT+TGG + chr5_4:9220119-9220138 None:intergenic 35.0%
ATGTTGTTGCTACCGAATTA+GGG - chr5_4:9220192-9220211 Msa0835810:CDS 35.0%
TTTCGCAACTACGACATATA+AGG + chr5_4:9220435-9220454 None:intergenic 35.0%
! TGCGAAACTTTTACACGTTT+TGG - chr5_4:9220448-9220467 Msa0835810:intron 35.0%
! TGAATTGGTTTACATTGTGC+TGG - chr5_4:9220641-9220660 Msa0835810:intron 35.0%
!! ACACATTCTGCTTTTGTGTT+TGG - chr5_4:9220683-9220702 Msa0835810:intron 35.0%
!! CACATTCTGCTTTTGTGTTT+GGG - chr5_4:9220684-9220703 Msa0835810:intron 35.0%
ATTAACAAATGCCCCATTGA+TGG - chr5_4:9220719-9220738 Msa0835810:intron 35.0%
GTACCAAATTTCCATCAATG+GGG + chr5_4:9220733-9220752 None:intergenic 35.0%
GGTACCAAATTTCCATCAAT+GGG + chr5_4:9220734-9220753 None:intergenic 35.0%
TGGTACCAAATTTCCATCAA+TGG + chr5_4:9220735-9220754 None:intergenic 35.0%
!! CTTTTTAAGCTCTTCATACC+TGG - chr5_4:9220891-9220910 Msa0835810:intron 35.0%
CATTTATCAACATGAAACCC+AGG + chr5_4:9220912-9220931 None:intergenic 35.0%
AAAGAAGAAGAAAACGACAG+AGG - chr5_4:9221035-9221054 Msa0835810:intron 35.0%
AAGAAGAAGAAAACGACAGA+GGG - chr5_4:9221036-9221055 Msa0835810:intron 35.0%
! GAATCTGAAAAAGAGCATGA+TGG - chr5_4:9221070-9221089 Msa0835810:intron 35.0%
AGAAAAGGAAAGACAGGAAA+GGG - chr5_4:9221111-9221130 Msa0835810:intron 35.0%
ACGTGAAAAGGATAAAGAGA+AGG - chr5_4:9221141-9221160 Msa0835810:intron 35.0%
! AAAGTGTTCTGTTGCATGAT+TGG - chr5_4:9221431-9221450 Msa0835810:intron 35.0%
TTGTATGACATCGATACTTG+GGG + chr5_4:9221500-9221519 None:intergenic 35.0%
ATTGCTTCCTTGTAGTGATT+AGG - chr5_4:9221611-9221630 Msa0835810:intron 35.0%
ATTAGGCGATGAAGAGTAAT+GGG - chr5_4:9221628-9221647 Msa0835810:intron 35.0%
ACTAGCTGTTCATATCATCA+GGG + chr5_4:9221667-9221686 None:intergenic 35.0%
TACTAGCTGTTCATATCATC+AGG + chr5_4:9221668-9221687 None:intergenic 35.0%
TCGAATGAGTAGTTTACTAC+TGG - chr5_4:9221818-9221837 Msa0835810:intron 35.0%
GATGTTGTACATATGTCCAT+GGG + chr5_4:9222128-9222147 None:intergenic 35.0%
TGATGTTGTACATATGTCCA+TGG + chr5_4:9222129-9222148 None:intergenic 35.0%
TCTGACTTAGGAAATTCACA+TGG + chr5_4:9222161-9222180 None:intergenic 35.0%
! TCAGATGTGACAATTTTGGA+AGG - chr5_4:9222176-9222195 Msa0835810:intron 35.0%
!! CAGATGTGACAATTTTGGAA+GGG - chr5_4:9222177-9222196 Msa0835810:intron 35.0%
ATTTATAAGTTCGTATCCGC+AGG - chr5_4:9222507-9222526 Msa0835810:intron 35.0%
!!! GTAAATTATTTTAGTGCCCG+AGG - chr5_4:9222576-9222595 Msa0835810:intron 35.0%
ATCATCTATGTTCCCCTAAT+TGG - chr5_4:9222689-9222708 Msa0835810:CDS 35.0%
TAGGTGCAGTATACCAATTA+GGG + chr5_4:9222705-9222724 None:intergenic 35.0%
ATAGGTGCAGTATACCAATT+AGG + chr5_4:9222706-9222725 None:intergenic 35.0%
GGTGGTCTAATAATCTTTGA+AGG - chr5_4:9222827-9222846 Msa0835810:intron 35.0%
!! AAACATGGTTAGTCTAGGAA+TGG + chr5_4:9222892-9222911 None:intergenic 35.0%
AATAGAGTTTCACAGCAACA+TGG - chr5_4:9223055-9223074 Msa0835810:intron 35.0%
ACAGCAACATGGTTCAATTA+GGG - chr5_4:9223066-9223085 Msa0835810:intron 35.0%
GAAGTCAGTTCCAAACATAA+GGG + chr5_4:9223271-9223290 None:intergenic 35.0%
TGAAGTCAGTTCCAAACATA+AGG + chr5_4:9223272-9223291 None:intergenic 35.0%
! GAACTGACTTCAGCTTAAAT+AGG - chr5_4:9223280-9223299 Msa0835810:intron 35.0%
!!! TTTTTGAAGCAGTGAAATCG+TGG + chr5_4:9223352-9223371 None:intergenic 35.0%
! TGAGTCTTTTTAGACAGACT+GGG + chr5_4:9223471-9223490 None:intergenic 35.0%
! TTGAGTCTTTTTAGACAGAC+TGG + chr5_4:9223472-9223491 None:intergenic 35.0%
GCGCAAATGGAAATGTAAAA+TGG + chr5_4:9223636-9223655 None:intergenic 35.0%
TTGCTTATATTCGAAACTGG+AGG - chr5_4:9223876-9223895 Msa0835810:intron 35.0%
!! ATCATCTGAACTTTTAGGTC+TGG - chr5_4:9224343-9224362 Msa0835810:intron 35.0%
!! TCATCTGAACTTTTAGGTCT+GGG - chr5_4:9224344-9224363 Msa0835810:intron 35.0%
AAGATGTCACTACACTTGAT+TGG - chr5_4:9224485-9224504 Msa0835810:intron 35.0%
TGATTGGAATGTGAGTTTGA+TGG - chr5_4:9224501-9224520 Msa0835810:intron 35.0%
CGGGTGAGAAAAAATAGAAA+CGG + chr5_4:9224599-9224618 None:intergenic 35.0%
TTGTTCTTATTAGGGAGGTT+TGG - chr5_4:9224676-9224695 Msa0835810:intron 35.0%
TGTTCTTATTAGGGAGGTTT+GGG - chr5_4:9224677-9224696 Msa0835810:intron 35.0%
!!! GGGTAGGTTTTGAAAATAGA+AGG - chr5_4:9224697-9224716 Msa0835810:intron 35.0%
AGAAGGAAAGACAGAAGAAA+GGG + chr5_4:9225030-9225049 None:intergenic 35.0%
AAGAAGGAAAGACAGAAGAA+AGG + chr5_4:9225031-9225050 None:intergenic 35.0%
! AATGTACTCTTTAGTTCACC+TGG + chr5_4:9225220-9225239 None:intergenic 35.0%
!! TCTCTGAAGTGGAATAAGAA+AGG - chr5_4:9225265-9225284 Msa0835810:intron 35.0%
TTCTTACTGGAAGTTTCGAT+GGG - chr5_4:9225296-9225315 Msa0835810:intron 35.0%
!! AACATGTATCATGGTGTCAT+TGG + chr5_4:9225551-9225570 None:intergenic 35.0%
! AACCCAGTAAAAACTTTTGC+CGG - chr5_4:9225589-9225608 Msa0835810:intron 35.0%
! TTCAAATTGGTGGATAACCT+TGG - chr5_4:9225755-9225774 Msa0835810:intron 35.0%
! TCAAATTGGTGGATAACCTT+GGG - chr5_4:9225756-9225775 Msa0835810:intron 35.0%
!! TTCACTCTGAAATACCAGAA+AGG + chr5_4:9226014-9226033 None:intergenic 35.0%
TTCAGATGATAACACTGCAA+AGG - chr5_4:9226081-9226100 Msa0835810:intron 35.0%
ATATTCCCTAATTGGTACCT+TGG + chr5_4:9226301-9226320 None:intergenic 35.0%
AGGAGATATATGCTATCAGA+TGG - chr5_4:9226376-9226395 Msa0835810:intron 35.0%
CCCTAATAAGAAATTGGTGT+TGG - chr5_4:9226425-9226444 Msa0835810:intron 35.0%
GCCAACACCAATTTCTTATT+AGG + chr5_4:9226429-9226448 None:intergenic 35.0%
!! ATAAGAAATTGGTGTTGGCT+AGG - chr5_4:9226430-9226449 Msa0835810:intron 35.0%
GACGAGGAAAACAGATTATA+GGG + chr5_4:9226536-9226555 None:intergenic 35.0%
TGACGAGGAAAACAGATTAT+AGG + chr5_4:9226537-9226556 None:intergenic 35.0%
AAATAGAATTTGTGGGTGAC+GGG - chr5_4:9226773-9226792 Msa0835810:intron 35.0%
TTAAAAACATTTGGGGGAAG+GGG + chr5_4:9226862-9226881 None:intergenic 35.0%
CTTAAAAACATTTGGGGGAA+GGG + chr5_4:9226863-9226882 None:intergenic 35.0%
GACAGCTTAAAAACATTTGG+GGG + chr5_4:9226868-9226887 None:intergenic 35.0%
ATTTATAGTTGTTGGGCTCT+GGG + chr5_4:9226900-9226919 None:intergenic 35.0%
TATTTATAGTTGTTGGGCTC+TGG + chr5_4:9226901-9226920 None:intergenic 35.0%
TACATGCTGTATATTCAGTG+CGG - chr5_4:9226977-9226996 Msa0835810:CDS 35.0%
TTATTAACAAGCAGGATGCT+GGG + chr5_4:9227777-9227796 None:intergenic 35.0%
! TGTTTTCTTGGCAACATTTC+AGG - chr5_4:9227879-9227898 Msa0835810:intron 35.0%
CCAGTCAAAACCAAAAGAAT+TGG + chr5_4:9227918-9227937 None:intergenic 35.0%
!!! CCAATTCTTTTGGTTTTGAC+TGG - chr5_4:9227915-9227934 Msa0835810:intron 35.0%
!! ACTGGTTTATTTGGTTCTAC+AGG - chr5_4:9227933-9227952 Msa0835810:intron 35.0%
!! CTGGTTTATTTGGTTCTACA+GGG - chr5_4:9227934-9227953 Msa0835810:intron 35.0%
AATGATCTTGCCATCATTCA+AGG + chr5_4:9228041-9228060 None:intergenic 35.0%
!!! GACAGAACTGTATTTTGGTT+CGG - chr5_4:9228243-9228262 Msa0835810:five_prime_UTR 35.0%
TTACAACGGAGTTACAAGAA+TGG + chr5_4:9228313-9228332 None:intergenic 35.0%
GTAACTCCGTTGTAAGTTTA+TGG - chr5_4:9228318-9228337 Msa0835810:five_prime_UTR 35.0%
TCGTTATCATGTTGCATTCT+CGG - chr5_4:9228416-9228435 Msa0835810:five_prime_UTR 35.0%
GGCAAGTCCTATATAATTCC+CGG + chr5_4:9219787-9219806 None:intergenic 40.0%
!! TTTTTGGTGTGAAGGGTTTG+GGG + chr5_4:9219913-9219932 None:intergenic 40.0%
!!! CTTTTTTGGTGTGAAGGGTT+TGG + chr5_4:9219915-9219934 None:intergenic 40.0%
GACGAGATAATTGAGTTCGA+CGG + chr5_4:9219995-9220014 None:intergenic 40.0%
TTTCGCTACCTTCAAGAATC+AGG - chr5_4:9220015-9220034 Msa0835810:three_prime_UTR 40.0%
TTTCGGTCAACCAAATGTCA+AGG - chr5_4:9220106-9220125 Msa0835810:CDS 40.0%
TTCGGTCAACCAAATGTCAA+GGG - chr5_4:9220107-9220126 Msa0835810:CDS 40.0%
AGCAACAACATCATAACCGT+TGG + chr5_4:9220183-9220202 None:intergenic 40.0%
GATGTTGTTGCTACCGAATT+AGG - chr5_4:9220191-9220210 Msa0835810:CDS 40.0%
GCAGTGACTAAACCCTAATT+CGG + chr5_4:9220207-9220226 None:intergenic 40.0%
TGCTTTGCACGTTCATGTTA+TGG + chr5_4:9220619-9220638 None:intergenic 40.0%
AACGTGCAAAGCAACTGAAT+TGG - chr5_4:9220626-9220645 Msa0835810:intron 40.0%
!!! TGTGCTGGTTTTATGACTGT+AGG - chr5_4:9220656-9220675 Msa0835810:intron 40.0%
! TGCTTTTGTGTTTGGGAATG+AGG - chr5_4:9220691-9220710 Msa0835810:intron 40.0%
! GCTTTTGTGTTTGGGAATGA+GGG - chr5_4:9220692-9220711 Msa0835810:intron 40.0%
ATGCCCCATTGATGGAAATT+TGG - chr5_4:9220727-9220746 Msa0835810:intron 40.0%
TGATGGAAATTTGGTACCAC+CGG - chr5_4:9220736-9220755 Msa0835810:intron 40.0%
AGAAGAAGAAAACGACAGAG+GGG - chr5_4:9221037-9221056 Msa0835810:intron 40.0%
ACGACAGAGGGGTAAAAATA+AGG - chr5_4:9221048-9221067 Msa0835810:intron 40.0%
GACAAGAGAAAAGGAAAGAC+AGG - chr5_4:9221105-9221124 Msa0835810:intron 40.0%
GAGAAAAGGAAAGACAGGAA+AGG - chr5_4:9221110-9221129 Msa0835810:intron 40.0%
AAGGGAGAAAGAACGTGAAA+AGG - chr5_4:9221129-9221148 Msa0835810:intron 40.0%
GGTCTCAGATCAAGAAGATA+AGG - chr5_4:9221219-9221238 Msa0835810:intron 40.0%
GGTTAATGTAAAGCTTGAGG+AGG - chr5_4:9221351-9221370 Msa0835810:intron 40.0%
AATGTAAAGCTTGAGGAGGA+TGG - chr5_4:9221355-9221374 Msa0835810:intron 40.0%
AACCACCTGTTCAACTGATT+TGG - chr5_4:9221391-9221410 Msa0835810:intron 40.0%
AACCAAATCAGTTGAACAGG+TGG + chr5_4:9221396-9221415 None:intergenic 40.0%
TTCATCGCCTAATCACTACA+AGG + chr5_4:9221621-9221640 None:intergenic 40.0%
GATTAGGCGATGAAGAGTAA+TGG - chr5_4:9221627-9221646 Msa0835810:intron 40.0%
CTAGCTGTTCATATCATCAG+GGG + chr5_4:9221666-9221685 None:intergenic 40.0%
AAAGTATGGTTGGAAGGAGA+TGG + chr5_4:9221728-9221747 None:intergenic 40.0%
TACTCATTCGAAATTCGCCA+GGG + chr5_4:9221809-9221828 None:intergenic 40.0%
ATTCCCACATAGAGCAAGTA+GGG + chr5_4:9222012-9222031 None:intergenic 40.0%
TATTCCCACATAGAGCAAGT+AGG + chr5_4:9222013-9222032 None:intergenic 40.0%
TGAGATTAACACAGTTCCTG+CGG + chr5_4:9222526-9222545 None:intergenic 40.0%
TGCAATCAAAACTACTGCCT+CGG + chr5_4:9222596-9222615 None:intergenic 40.0%
AGGTGCAGTATACCAATTAG+GGG + chr5_4:9222704-9222723 None:intergenic 40.0%
CCTAACTCAAGGGATTGATT+AGG + chr5_4:9222773-9222792 None:intergenic 40.0%
CCTAATCAATCCCTTGAGTT+AGG - chr5_4:9222770-9222789 Msa0835810:intron 40.0%
TTAGACCACCTAAGGGATTA+GGG + chr5_4:9222817-9222836 None:intergenic 40.0%
ATTAGACCACCTAAGGGATT+AGG + chr5_4:9222818-9222837 None:intergenic 40.0%
TAGGTCTAAGTCGAAAGCTA+TGG - chr5_4:9222928-9222947 Msa0835810:CDS 40.0%
CACAGCAACATGGTTCAATT+AGG - chr5_4:9223065-9223084 Msa0835810:intron 40.0%
TCAGCTTAAATAGGCAAGTC+TGG - chr5_4:9223289-9223308 Msa0835810:intron 40.0%
GAAAATTGCGGTACGATTTC+TGG - chr5_4:9223409-9223428 Msa0835810:intron 40.0%
GGTGTGAAAAGCAGAAAATC+TGG + chr5_4:9223448-9223467 None:intergenic 40.0%
! AGTCTTTTTAGACAGACTGG+GGG + chr5_4:9223469-9223488 None:intergenic 40.0%
! GAGTCTTTTTAGACAGACTG+GGG + chr5_4:9223470-9223489 None:intergenic 40.0%
ATAGAATAGATGAGGGCAAG+TGG - chr5_4:9223936-9223955 Msa0835810:intron 40.0%
!! CATCTGAACTTTTAGGTCTG+GGG - chr5_4:9224345-9224364 Msa0835810:intron 40.0%
! GATCACTGATAGTGACTTCA+AGG - chr5_4:9224545-9224564 Msa0835810:intron 40.0%
TCTGCTCAAGAAAGCTTCAA+CGG + chr5_4:9224619-9224638 None:intergenic 40.0%
! TCTTGAGCAGAGCAATTTTG+TGG - chr5_4:9224628-9224647 Msa0835810:intron 40.0%
! CTTGAGCAGAGCAATTTTGT+GGG - chr5_4:9224629-9224648 Msa0835810:intron 40.0%
TGCTTGACCATCATAAGAAC+CGG + chr5_4:9224983-9225002 None:intergenic 40.0%
ATGATGGTCAAGCACGAATT+TGG - chr5_4:9224989-9225008 Msa0835810:intron 40.0%
! GTCTGGTTTAGTTGCATTTG+TGG - chr5_4:9225083-9225102 Msa0835810:intron 40.0%
!! GACCCATATTTTCTCTGAAG+TGG - chr5_4:9225254-9225273 Msa0835810:intron 40.0%
CTTCTTACTGGAAGTTTCGA+TGG - chr5_4:9225295-9225314 Msa0835810:intron 40.0%
! ACCCAGTAAAAACTTTTGCC+GGG - chr5_4:9225590-9225609 Msa0835810:intron 40.0%
! ATGCCGTGCTTATACCTTTT+TGG - chr5_4:9225670-9225689 Msa0835810:intron 40.0%
! TGCCGTGCTTATACCTTTTT+GGG - chr5_4:9225671-9225690 Msa0835810:intron 40.0%
! CTCCCAAAAAGGTATAAGCA+CGG + chr5_4:9225676-9225695 None:intergenic 40.0%
!! GTGCTTATACCTTTTTGGGA+GGG - chr5_4:9225675-9225694 Msa0835810:intron 40.0%
! GATAGTTTTCCCTCCCAAAA+AGG + chr5_4:9225687-9225706 None:intergenic 40.0%
!! ATCTAGAAAGCATCATCCCA+AGG + chr5_4:9225775-9225794 None:intergenic 40.0%
TTTCGAATTCACCAGCAGTA+TGG - chr5_4:9225840-9225859 Msa0835810:intron 40.0%
TTCGAATTCACCAGCAGTAT+GGG - chr5_4:9225841-9225860 Msa0835810:intron 40.0%
AGTGTTATCATCTGAACACG+AGG + chr5_4:9226077-9226096 None:intergenic 40.0%
!!! TGATTTTAGGGAGCATTCCA+AGG - chr5_4:9226281-9226300 Msa0835810:intron 40.0%
! AGCATTCCAAGGTACCAATT+AGG - chr5_4:9226292-9226311 Msa0835810:intron 40.0%
! GCATTCCAAGGTACCAATTA+GGG - chr5_4:9226293-9226312 Msa0835810:intron 40.0%
TATTTGTAGCAGGACCAGTT+GGG + chr5_4:9226404-9226423 None:intergenic 40.0%
TTATTTGTAGCAGGACCAGT+TGG + chr5_4:9226405-9226424 None:intergenic 40.0%
!! ATGCTCTTCATTGACTTGCA+TGG - chr5_4:9226474-9226493 Msa0835810:intron 40.0%
CAGTTAGCAACCTAAGATTC+AGG + chr5_4:9226560-9226579 None:intergenic 40.0%
!! TAGTGCTCTAAGGGAGTATT+TGG - chr5_4:9226607-9226626 Msa0835810:intron 40.0%
! TCGTAATTTCTTCTTTGGGG+AGG + chr5_4:9226823-9226842 None:intergenic 40.0%
TAAAAACATTTGGGGGAAGG+GGG + chr5_4:9226861-9226880 None:intergenic 40.0%
GCTTAAAAACATTTGGGGGA+AGG + chr5_4:9226864-9226883 None:intergenic 40.0%
TTTATAGTTGTTGGGCTCTG+GGG + chr5_4:9226899-9226918 None:intergenic 40.0%
AAGACAACAAGCATAGTTGC+AGG + chr5_4:9227082-9227101 None:intergenic 40.0%
TTTGTAGAATGTGATGAGGG+AGG + chr5_4:9227345-9227364 None:intergenic 40.0%
TTGACTCTACCGTAAAGCTA+TGG - chr5_4:9227629-9227648 Msa0835810:intron 40.0%
TGACTCTACCGTAAAGCTAT+GGG - chr5_4:9227630-9227649 Msa0835810:intron 40.0%
! TTCCACATCCCATAGCTTTA+CGG + chr5_4:9227641-9227660 None:intergenic 40.0%
TTCATAGCTTGAATGGACAC+AGG - chr5_4:9227674-9227693 Msa0835810:intron 40.0%
CAGTGGCAAGAATATATGGA+TGG - chr5_4:9227727-9227746 Msa0835810:intron 40.0%
CTTATTAACAAGCAGGATGC+TGG + chr5_4:9227778-9227797 None:intergenic 40.0%
! GCATCCTGCTTGTTAATAAG+CGG - chr5_4:9227778-9227797 Msa0835810:intron 40.0%
TTGACCGCTTATTAACAAGC+AGG + chr5_4:9227785-9227804 None:intergenic 40.0%
!!! GTAGTTGGTGCCAATTCTTT+TGG - chr5_4:9227905-9227924 Msa0835810:intron 40.0%
TGGCTAAATACTCACCATTG+GGG + chr5_4:9227985-9228004 None:intergenic 40.0%
CTGGCTAAATACTCACCATT+GGG + chr5_4:9227986-9228005 None:intergenic 40.0%
ACTGGCTAAATACTCACCAT+TGG + chr5_4:9227987-9228006 None:intergenic 40.0%
AATGGTGAGTATTTAGCCAG+TGG - chr5_4:9227986-9228005 Msa0835810:intron 40.0%
ATGGTGAGTATTTAGCCAGT+GGG - chr5_4:9227987-9228006 Msa0835810:intron 40.0%
AAAACATACAACGGCAATGG+AGG - chr5_4:9228061-9228080 Msa0835810:intron 40.0%
!!! GAGGTATTTTTGAGGTCTGT+TGG - chr5_4:9228080-9228099 Msa0835810:intron 40.0%
!!! TTTTGAGGTCTGTTGGAACA+AGG - chr5_4:9228087-9228106 Msa0835810:intron 40.0%
TTGAGCAACTAGCCAAAGTA+AGG + chr5_4:9228195-9228214 None:intergenic 40.0%
AAATGCTAACAAGTGCACCT+GGG + chr5_4:9228275-9228294 None:intergenic 40.0%
AAAATGCTAACAAGTGCACC+TGG + chr5_4:9228276-9228295 None:intergenic 40.0%
TGGGAAAAAAGGGCAGTAAG+CGG + chr5_4:9219808-9219827 None:intergenic 45.0%
AAGACACGGGTGGGAAAAAA+GGG + chr5_4:9219818-9219837 None:intergenic 45.0%
GAGATAATTGAGTTCGACGG+AGG + chr5_4:9219992-9220011 None:intergenic 45.0%
! TGTTATGGTTTTCCCCTCCT+AGG - chr5_4:9220542-9220561 Msa0835810:CDS 45.0%
TTTGTGTTTGGGAATGAGGG+TGG - chr5_4:9220695-9220714 Msa0835810:intron 45.0%
GATGGAAATTTGGTACCACC+GGG - chr5_4:9220737-9220756 Msa0835810:intron 45.0%
ATGGAAATTTGGTACCACCG+GGG - chr5_4:9220738-9220757 Msa0835810:intron 45.0%
ACAAATGTAACAAGAGCCCC+CGG + chr5_4:9220758-9220777 None:intergenic 45.0%
TCAGAAGGGACTACAGTTCT+TGG - chr5_4:9220778-9220797 Msa0835810:intron 45.0%
GAAGTCTGCATCACACTGAT+AGG + chr5_4:9220939-9220958 None:intergenic 45.0%
! TGTTATCTTGTTTGCTGCCC+TGG - chr5_4:9221789-9221808 Msa0835810:CDS 45.0%
CTACTCATTCGAAATTCGCC+AGG + chr5_4:9221810-9221829 None:intergenic 45.0%
CATAGAGCAAGTAGGGACAT+GGG + chr5_4:9222005-9222024 None:intergenic 45.0%
ACATAGAGCAAGTAGGGACA+TGG + chr5_4:9222006-9222025 None:intergenic 45.0%
ATGTCCCTACTTGCTCTATG+TGG - chr5_4:9222005-9222024 Msa0835810:intron 45.0%
TGTCCCTACTTGCTCTATGT+GGG - chr5_4:9222006-9222025 Msa0835810:intron 45.0%
! TTTGGAAGGGCATAAGTCAG+AGG - chr5_4:9222190-9222209 Msa0835810:intron 45.0%
AGCCTGTTTACCATCCACTT+AGG - chr5_4:9222277-9222296 Msa0835810:intron 45.0%
GACCTAAGTGGATGGTAAAC+AGG + chr5_4:9222282-9222301 None:intergenic 45.0%
GATGCAAGAAAGGATCCTGT+AGG + chr5_4:9222323-9222342 None:intergenic 45.0%
ACAGGATCCTTTCTTGCATC+AGG - chr5_4:9222323-9222342 Msa0835810:intron 45.0%
CAGGATCCTTTCTTGCATCA+GGG - chr5_4:9222324-9222343 Msa0835810:intron 45.0%
ATCCTTTCTTGCATCAGGGT+TGG - chr5_4:9222328-9222347 Msa0835810:intron 45.0%
TACCAACCCTGATGCAAGAA+AGG + chr5_4:9222333-9222352 None:intergenic 45.0%
AAGTCTATCACTGTGCACGT+GGG + chr5_4:9222453-9222472 None:intergenic 45.0%
AAAGTCTATCACTGTGCACG+TGG + chr5_4:9222454-9222473 None:intergenic 45.0%
GCAATCAAAACTACTGCCTC+GGG + chr5_4:9222595-9222614 None:intergenic 45.0%
AGAAGAGGGTCCTAACTCAA+GGG + chr5_4:9222783-9222802 None:intergenic 45.0%
TAGACCACCTAAGGGATTAG+GGG + chr5_4:9222816-9222835 None:intergenic 45.0%
CGCTACGGTTGTGAAAATTG+CGG - chr5_4:9223397-9223416 Msa0835810:intron 45.0%
! AGCAGAAAATCTGGAAGTGC+TGG + chr5_4:9223439-9223458 None:intergenic 45.0%
! AAGGGCGTGTAGAATCAGAA+AGG + chr5_4:9224220-9224239 None:intergenic 45.0%
GGGATTCAACAGCTCGTATT+TGG - chr5_4:9224365-9224384 Msa0835810:intron 45.0%
CTGCTCAAGAAAGCTTCAAC+GGG + chr5_4:9224618-9224637 None:intergenic 45.0%
CTTATTAGGGAGGTTTGGGT+AGG - chr5_4:9224681-9224700 Msa0835810:intron 45.0%
CTTATGGAGAGCTTGACCTT+TGG - chr5_4:9224921-9224940 Msa0835810:intron 45.0%
! ACCTTTGGTTGCTGTTGTAC+AGG - chr5_4:9224936-9224955 Msa0835810:intron 45.0%
! CCTTTGGTTGCTGTTGTACA+GGG - chr5_4:9224937-9224956 Msa0835810:intron 45.0%
! CTTTGGTTGCTGTTGTACAG+GGG - chr5_4:9224938-9224957 Msa0835810:intron 45.0%
! TTTGGTTGCTGTTGTACAGG+GGG - chr5_4:9224939-9224958 Msa0835810:intron 45.0%
! CTTGCAACCGGTTCTTATGA+TGG - chr5_4:9224973-9224992 Msa0835810:intron 45.0%
GAATTTGGACCGCTAATGGT+AGG - chr5_4:9225004-9225023 Msa0835810:intron 45.0%
AAGAAAGGGCCTACCATTAG+CGG + chr5_4:9225016-9225035 None:intergenic 45.0%
TCGATGGGTCTGCAATTGTA+TGG - chr5_4:9225311-9225330 Msa0835810:intron 45.0%
CGATGGGTCTGCAATTGTAT+GGG - chr5_4:9225312-9225331 Msa0835810:intron 45.0%
GTTCAACACTCGACGTTGAT+TGG - chr5_4:9225497-9225516 Msa0835810:intron 45.0%
! GCCCGGCAAAAGTTTTTACT+GGG + chr5_4:9225594-9225613 None:intergenic 45.0%
! TGCCCGGCAAAAGTTTTTAC+TGG + chr5_4:9225595-9225614 None:intergenic 45.0%
ATGTGTATAAACCTGGTGCC+CGG + chr5_4:9225611-9225630 None:intergenic 45.0%
!! CGTGCTTATACCTTTTTGGG+AGG - chr5_4:9225674-9225693 Msa0835810:intron 45.0%
CAGCAGTATGGGACTTCATT+GGG - chr5_4:9225852-9225871 Msa0835810:intron 45.0%
AGCAGTATGGGACTTCATTG+GGG - chr5_4:9225853-9225872 Msa0835810:intron 45.0%
CTGTCTGATAGCAACCTTTC+TGG - chr5_4:9225997-9226016 Msa0835810:intron 45.0%
TGTATCAAATGGGATCCCAC+AGG - chr5_4:9226040-9226059 Msa0835810:CDS 45.0%
TTCCTCGTCACCTGAATCTT+AGG - chr5_4:9226547-9226566 Msa0835810:intron 45.0%
AACCTAAGATTCAGGTGACG+AGG + chr5_4:9226552-9226571 None:intergenic 45.0%
AAAAACATTTGGGGGAAGGG+GGG + chr5_4:9226860-9226879 None:intergenic 45.0%
TGATTATCAACCCCGGTTGT+AGG - chr5_4:9226926-9226945 Msa0835810:CDS 45.0%
GATTATCAACCCCGGTTGTA+GGG - chr5_4:9226927-9226946 Msa0835810:CDS 45.0%
ATTATCAACCCCGGTTGTAG+GGG - chr5_4:9226928-9226947 Msa0835810:CDS 45.0%
TAGTTGCAGGTGCAGATATC+CGG + chr5_4:9227069-9227088 None:intergenic 45.0%
! GAACAGTGAGTAGTGGAACA+AGG + chr5_4:9227288-9227307 None:intergenic 45.0%
CAACTGATGCACTGTACAGA+AGG + chr5_4:9227612-9227631 None:intergenic 45.0%
TACCGTAAAGCTATGGGATG+TGG - chr5_4:9227636-9227655 Msa0835810:intron 45.0%
AAGCTATGGGATGTGGAACT+CGG - chr5_4:9227643-9227662 Msa0835810:intron 45.0%
!! CTGGTGTCTGGTTGTTTTCT+TGG - chr5_4:9227867-9227886 Msa0835810:intron 45.0%
TTCTTGGCAACATTTCAGGC+TGG - chr5_4:9227883-9227902 Msa0835810:intron 45.0%
CAACATTTCAGGCTGGTAGT+TGG - chr5_4:9227890-9227909 Msa0835810:intron 45.0%
ACTATTGCATTCAGCCCCAA+TGG - chr5_4:9227968-9227987 Msa0835810:intron 45.0%
!!! CGGCAATGGAGGTATTTTTG+AGG - chr5_4:9228072-9228091 Msa0835810:intron 45.0%
AAAGTAAGGTGGCTCTTCTC+AGG + chr5_4:9228181-9228200 None:intergenic 45.0%
TGAGAAGAGCCACCTTACTT+TGG - chr5_4:9228180-9228199 Msa0835810:CDS 45.0%
AGCAACTAGCCAAAGTAAGG+TGG + chr5_4:9228192-9228211 None:intergenic 45.0%
AATGCTAACAAGTGCACCTG+GGG + chr5_4:9228274-9228293 None:intergenic 45.0%
!!! TGTATATTATAAATTTTATA+AGG + chr5_4:9221588-9221607 None:intergenic 5.0%
!! AAAAAATAAATAAATTTGAA+AGG - chr5_4:9223781-9223800 Msa0835810:CDS 5.0%
TCCCGGATGAAGAGGTTCAA+GGG + chr5_4:9219770-9219789 None:intergenic 50.0%
TTCCCGGATGAAGAGGTTCA+AGG + chr5_4:9219771-9219790 None:intergenic 50.0%
GAAGACACGGGTGGGAAAAA+AGG + chr5_4:9219819-9219838 None:intergenic 50.0%
! CTCGTTGAAGAGAACGGGTT+TGG + chr5_4:9219955-9219974 None:intergenic 50.0%
CCATGCTCGTTGAAGAGAAC+GGG + chr5_4:9219960-9219979 None:intergenic 50.0%
GCCATGCTCGTTGAAGAGAA+CGG + chr5_4:9219961-9219980 None:intergenic 50.0%
ATTGAGTTCGACGGAGGTGA+TGG + chr5_4:9219986-9220005 None:intergenic 50.0%
! ATGCGGGAGCTTTAGTGCAT+CGG - chr5_4:9220574-9220593 Msa0835810:intron 50.0%
TCGGGCTGCCCTTTATAAGA+AGG - chr5_4:9220593-9220612 Msa0835810:intron 50.0%
TGGAAATTTGGTACCACCGG+GGG - chr5_4:9220739-9220758 Msa0835810:intron 50.0%
GGGACTACAGTTCTTGGAGA+TGG - chr5_4:9220784-9220803 Msa0835810:intron 50.0%
! AAAGAGCATGATGGTGACCG+CGG - chr5_4:9221079-9221098 Msa0835810:intron 50.0%
! CCTTTTCTCTTGTCAGACCG+CGG + chr5_4:9221099-9221118 None:intergenic 50.0%
! CTTGAGGAGGATGGAGCATT+TGG - chr5_4:9221364-9221383 Msa0835810:intron 50.0%
TTGTATAGGACCAGAGCCCA+TGG - chr5_4:9222109-9222128 Msa0835810:CDS 50.0%
GTACATATGTCCATGGGCTC+TGG + chr5_4:9222122-9222141 None:intergenic 50.0%
CAAGCACAGACCTAAGTGGA+TGG + chr5_4:9222290-9222309 None:intergenic 50.0%
TGCACAAGCACAGACCTAAG+TGG + chr5_4:9222294-9222313 None:intergenic 50.0%
CTTAGGTCTGTGCTTGTGCA+TGG - chr5_4:9222294-9222313 Msa0835810:intron 50.0%
CAGGAGAGAGAGATGAGATC+AGG - chr5_4:9222658-9222677 Msa0835810:CDS 50.0%
GAGAAGAGGGTCCTAACTCA+AGG + chr5_4:9222784-9222803 None:intergenic 50.0%
GGGGCTGTAGTTTGAGAAGA+GGG + chr5_4:9222797-9222816 None:intergenic 50.0%
AGGGGCTGTAGTTTGAGAAG+AGG + chr5_4:9222798-9222817 None:intergenic 50.0%
ACTACAGCCCCTAATCCCTT+AGG - chr5_4:9222806-9222825 Msa0835810:intron 50.0%
! CACAACCGTAGCGCGATTTT+GGG + chr5_4:9223320-9223339 None:intergenic 50.0%
! TCACAACCGTAGCGCGATTT+TGG + chr5_4:9223321-9223340 None:intergenic 50.0%
! TCACAACCGTAGCGCGATTT+TGG + chr5_4:9223321-9223340 None:intergenic 50.0%
GCAACACCAACACAGTCGAA+GGG + chr5_4:9224432-9224451 None:intergenic 50.0%
TGCAACACCAACACAGTCGA+AGG + chr5_4:9224433-9224452 None:intergenic 50.0%
!! TGTTGGTGTTGCAGCACATC+AGG - chr5_4:9224440-9224459 Msa0835810:intron 50.0%
!! GTTGGTGTTGCAGCACATCA+GGG - chr5_4:9224441-9224460 Msa0835810:intron 50.0%
!! TTGGTGTTGCAGCACATCAG+GGG - chr5_4:9224442-9224461 Msa0835810:intron 50.0%
CCCTGTACAACAGCAACCAA+AGG + chr5_4:9224940-9224959 None:intergenic 50.0%
GCACGAATTTGGACCGCTAA+TGG - chr5_4:9225000-9225019 Msa0835810:intron 50.0%
! AAAAACTTTTGCCGGGCACC+AGG - chr5_4:9225597-9225616 Msa0835810:intron 50.0%
CCAATGAAGTCCCATACTGC+TGG + chr5_4:9225854-9225873 None:intergenic 50.0%
CCAGCAGTATGGGACTTCAT+TGG - chr5_4:9225851-9225870 Msa0835810:intron 50.0%
GGATCCCACAGGTTCATTAC+TGG - chr5_4:9226051-9226070 Msa0835810:CDS 50.0%
GAGGCCAGTAATGAACCTGT+GGG + chr5_4:9226058-9226077 None:intergenic 50.0%
AGCTATGGGATGTGGAACTC+GGG - chr5_4:9227644-9227663 Msa0835810:intron 50.0%
TTAACAAGCAGGATGCTGGG+AGG + chr5_4:9227774-9227793 None:intergenic 50.0%
TGAGGTCTGTTGGAACAAGG+AGG - chr5_4:9228090-9228109 Msa0835810:intron 50.0%
GAGGTCTGTTGGAACAAGGA+GGG - chr5_4:9228091-9228110 Msa0835810:intron 50.0%
GGCCCTTGAACCTCTTCATC+CGG - chr5_4:9219765-9219784 Msa0835810:three_prime_UTR 55.0%
GCCCTTGAACCTCTTCATCC+GGG - chr5_4:9219766-9219785 Msa0835810:three_prime_UTR 55.0%
TGTCAACGCGGCAGAAGACA+CGG + chr5_4:9219832-9219851 None:intergenic 55.0%
GTGTGCTGTGTGTGTCAACG+CGG + chr5_4:9219844-9219863 None:intergenic 55.0%
CCCGTTCTCTTCAACGAGCA+TGG - chr5_4:9219957-9219976 Msa0835810:three_prime_UTR 55.0%
! TGCGGGAGCTTTAGTGCATC+GGG - chr5_4:9220575-9220594 Msa0835810:intron 55.0%
AATGTAACAAGAGCCCCCGG+TGG + chr5_4:9220755-9220774 None:intergenic 55.0%
CCGCGGTCTGACAAGAGAAA+AGG - chr5_4:9221096-9221115 Msa0835810:intron 55.0%
! GAGGAGGATGGAGCATTTGG+AGG - chr5_4:9221367-9221386 Msa0835810:intron 55.0%
GCTTGTGCATGGAGTCCTAC+AGG - chr5_4:9222305-9222324 Msa0835810:intron 55.0%
ACAGCCCCTAATCCCTTAGG+TGG - chr5_4:9222809-9222828 Msa0835810:intron 55.0%
TGACACCCAGAAGACTGCAG+AGG + chr5_4:9223218-9223237 None:intergenic 55.0%
TTGCGCCCAAAATCGCGCTA+CGG - chr5_4:9223312-9223331 Msa0835810:intron 55.0%
GCCAAGCCAAAATCGCGCTA+CGG - chr5_4:9223382-9223401 Msa0835810:intron 55.0%
!!! ACCGTAGCGCGATTTTGGCT+TGG + chr5_4:9223386-9223405 None:intergenic 55.0%
CACAGTCGAAGGGTCGTTCT+TGG + chr5_4:9224422-9224441 None:intergenic 55.0%
GAACGACCCTTCGACTGTGT+TGG - chr5_4:9224423-9224442 Msa0835810:intron 55.0%
! GTTGCTGTTGTACAGGGGGA+GGG - chr5_4:9224943-9224962 Msa0835810:intron 55.0%
! TTGCTGTTGTACAGGGGGAG+GGG - chr5_4:9224944-9224963 Msa0835810:intron 55.0%
GAGGGGACACTACTTGCAAC+CGG - chr5_4:9224961-9224980 Msa0835810:intron 55.0%
! ATGTGTTCGGGGCTTTGACC+AGG - chr5_4:9225199-9225218 Msa0835810:intron 55.0%
CGAGGCCAGTAATGAACCTG+TGG + chr5_4:9226059-9226078 None:intergenic 55.0%
GCTATCAGATGGAGCCCAAC+TGG - chr5_4:9226387-9226406 Msa0835810:intron 55.0%
GACGGGAATCAGAGTGTGGA+CGG - chr5_4:9226790-9226809 Msa0835810:intron 55.0%
GGATTTGTCATGGGACCCAC+TGG + chr5_4:9228005-9228024 None:intergenic 55.0%
!!! TTTTGGTTCGGTAGTGCCCC+AGG - chr5_4:9228255-9228274 Msa0835810:five_prime_UTR 55.0%
TCTGCTGCCAGATAGCTCCA+AGG - chr5_4:9228439-9228458 Msa0835810:five_prime_UTR 55.0%
GTCAACGCGGCAGAAGACAC+GGG + chr5_4:9219831-9219850 None:intergenic 60.0%
CTAAAGCTCCCGCATGCGCA+GGG + chr5_4:9220569-9220588 None:intergenic 60.0%
ACTAAAGCTCCCGCATGCGC+AGG + chr5_4:9220570-9220589 None:intergenic 60.0%
TCGCCTCCTCTGCAGTCTTC+TGG - chr5_4:9223209-9223228 Msa0835810:CDS 60.0%
CGCCTCCTCTGCAGTCTTCT+GGG - chr5_4:9223210-9223229 Msa0835810:CDS 60.0%
CACCCAGAAGACTGCAGAGG+AGG + chr5_4:9223215-9223234 None:intergenic 60.0%
! GGTTGCTGTTGTACAGGGGG+AGG - chr5_4:9224942-9224961 Msa0835810:intron 60.0%
!! GGGTGACGGGAATCAGAGTG+TGG - chr5_4:9226786-9226805 Msa0835810:intron 60.0%
GGGAATCAGAGTGTGGACGG+AGG - chr5_4:9226793-9226812 Msa0835810:intron 60.0%
ATCAGAGTGTGGACGGAGGC+AGG - chr5_4:9226797-9226816 Msa0835810:intron 60.0%
TCCCAGCTGACCCCTACAAC+CGG + chr5_4:9226941-9226960 None:intergenic 60.0%
ACAAGCAGGATGCTGGGAGG+AGG + chr5_4:9227771-9227790 None:intergenic 60.0%
ACGCGGCAGAAGACACGGGT+GGG + chr5_4:9219827-9219846 None:intergenic 65.0%
AACGCGGCAGAAGACACGGG+TGG + chr5_4:9219828-9219847 None:intergenic 65.0%
CATGCGCAGGGTCCTAGGAG+GGG + chr5_4:9220557-9220576 None:intergenic 65.0%
GCATGCGCAGGGTCCTAGGA+GGG + chr5_4:9220558-9220577 None:intergenic 65.0%
CTCCTAGGACCCTGCGCATG+CGG - chr5_4:9220557-9220576 Msa0835810:CDS 65.0%
TCCTAGGACCCTGCGCATGC+GGG - chr5_4:9220558-9220577 Msa0835810:CDS 65.0%
CCAGCTGACCCCTACAACCG+GGG + chr5_4:9226939-9226958 None:intergenic 65.0%
CCCAGCTGACCCCTACAACC+GGG + chr5_4:9226940-9226959 None:intergenic 65.0%
CCCGGTTGTAGGGGTCAGCT+GGG - chr5_4:9226937-9226956 Msa0835810:CDS 65.0%
CGCATGCGCAGGGTCCTAGG+AGG + chr5_4:9220559-9220578 None:intergenic 70.0%
TCCCGCATGCGCAGGGTCCT+AGG + chr5_4:9220562-9220581 None:intergenic 70.0%
CCCCGGTTGTAGGGGTCAGC+TGG - chr5_4:9226936-9226955 Msa0835810:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 9219747 9228464 9219747 ID=Msa0835810;Name=Msa0835810
chr5_4 mRNA 9219747 9228464 9219747 ID=Msa0835810-mRNA-1;Parent=Msa0835810;Name=Msa0835810-mRNA-1;_AED=0.31;_eAED=0.31;_QI=229|1|0.93|1|0.92|0.86|15|269|595
chr5_4 exon 9219747 9219913 9219747 ID=Msa0835810-mRNA-1:exon:4060;Parent=Msa0835810-mRNA-1
chr5_4 exon 9219935 9220256 9219935 ID=Msa0835810-mRNA-1:exon:4059;Parent=Msa0835810-mRNA-1
chr5_4 exon 9220516 9220590 9220516 ID=Msa0835810-mRNA-1:exon:4058;Parent=Msa0835810-mRNA-1
chr5_4 exon 9221760 9221833 9221760 ID=Msa0835810-mRNA-1:exon:4057;Parent=Msa0835810-mRNA-1
chr5_4 exon 9221909 9221962 9221909 ID=Msa0835810-mRNA-1:exon:4056;Parent=Msa0835810-mRNA-1
chr5_4 exon 9222109 9222183 9222109 ID=Msa0835810-mRNA-1:exon:4055;Parent=Msa0835810-mRNA-1
chr5_4 exon 9222593 9222714 9222593 ID=Msa0835810-mRNA-1:exon:4054;Parent=Msa0835810-mRNA-1
chr5_4 exon 9222832 9222990 9222832 ID=Msa0835810-mRNA-1:exon:4053;Parent=Msa0835810-mRNA-1
chr5_4 exon 9223190 9223253 9223190 ID=Msa0835810-mRNA-1:exon:4052;Parent=Msa0835810-mRNA-1
chr5_4 exon 9223701 9223851 9223701 ID=Msa0835810-mRNA-1:exon:4051;Parent=Msa0835810-mRNA-1
chr5_4 exon 9225866 9225912 9225866 ID=Msa0835810-mRNA-1:exon:4050;Parent=Msa0835810-mRNA-1
chr5_4 exon 9226000 9226094 9226000 ID=Msa0835810-mRNA-1:exon:4049;Parent=Msa0835810-mRNA-1
chr5_4 exon 9226823 9227267 9226823 ID=Msa0835810-mRNA-1:exon:4048;Parent=Msa0835810-mRNA-1
chr5_4 exon 9227388 9227533 9227388 ID=Msa0835810-mRNA-1:exon:4047;Parent=Msa0835810-mRNA-1
chr5_4 exon 9228175 9228464 9228175 ID=Msa0835810-mRNA-1:exon:4046;Parent=Msa0835810-mRNA-1
chr5_4 five_prime_UTR 9228236 9228464 9228236 ID=Msa0835810-mRNA-1:five_prime_utr;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9228175 9228235 9228175 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9227388 9227533 9227388 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9226823 9227267 9226823 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9226000 9226094 9226000 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9225866 9225912 9225866 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9223701 9223851 9223701 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9223190 9223253 9223190 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9222832 9222990 9222832 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9222593 9222714 9222593 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9222109 9222183 9222109 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9221909 9221962 9221909 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9221760 9221833 9221760 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9220516 9220590 9220516 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 CDS 9220037 9220256 9220037 ID=Msa0835810-mRNA-1:cds;Parent=Msa0835810-mRNA-1
chr5_4 three_prime_UTR 9219935 9220036 9219935 ID=Msa0835810-mRNA-1:three_prime_utr;Parent=Msa0835810-mRNA-1
chr5_4 three_prime_UTR 9219747 9219913 9219747 ID=Msa0835810-mRNA-1:three_prime_utr;Parent=Msa0835810-mRNA-1
Gene Sequence

>Msa0835810

ATGGCTTCCATCACCTCCGTCGAACTCAATTATCTCGTCTTTCGCTACCTTCAAGAATCAGGTTTCACACATTCTGCTTTTGTGTTTGGGAATGAGGGTGGCATTAACAAATGCCCCATTGATGGAAATTTGGTACCACCGGGGGCTCTTGTTACATTTGTTCAGAAGGGACTACAGTTCTTGGAGATGGAAGCTAACTTGAATAATTGTGATGCAGACTTCGATGAAGATTTTTCGTTCTTACAACCTTTGGATCTTATCACAAAAGACGTGCATGAACTTAAGAAAATGATTAATGAAAGAAGAAGAAAACGACAGAGGGGTAAAAATAAGGAATCTGAAAAAGAGCATGATGGTGACCGCGGTCTGACAAGAGAAAAGGAAAGACAGGAAAGGGAGAAAGAACGTGAAAAGGATAAAGAGAAGGTAGAAAATCATAAAGAGCAAGAACTGCAAAATGAAAATCAGATCAGTAGAGAAATGGTCTCAGATCAAGAAGATAAGGTTAATGGTGCTAAAAAAGAAGATGCTAAAAAGAAAGACAAGGTTAATGGTACTAAAAAAGAAGATGCTAAAAAAGAAGGTAAGGTTAATGGTGCTAAAAAAGAAGATAAGGTTAATGTAAAGCTTGAGGAGGATGGAGCATTTGGAGGACCAGAGCCCATGGACATATGTACAACATCAGCATCTCAGCCATGTGAATTTCCTAAGTCAGATGTGACAATTTTGGAAGGGCATAAGTCAGAGGTCTGTGCTTGTGCATGGAGTCCTACAGGATCCTTTCTTGCATCAGGGTCTGGGGATTCAACAGCTCGTATTTGGACAATAGCTGAAGCGACGCGTAAATTAGATTCCAAGAACGACCCTTCGACTGTGTTGGTGTTGCAGCACATCAGGGGTACAACCACTGAAAAGAATAAAGATGTCACTACACTTGATTGGAATGGGGAGGGGACACTACTTGCAACCGGTTCTTATGATGGTCAAGCACGAATTTGGACCGCTAATGGTGAACTAAAGAGTACATTAAGCAAACACAAGGGACCCATATTTTCTCTGAAGTGGAATAAGAAAGGAGATTATCTTCTTACTGGAAGTTTCGATGGGTCTGCAATTGTATGGGATGTTCAAGCTGAGAAATCAAAACAACAATTTGATTTTCACAGCGGTTCAACACTCGACGTTGATTGGCGCAATAATGTGTCATTTGCATCAAGCTCCAATGACACCATGATACATGTTTGCAAGATTGGCGAAAACAACCCAGTAAAAACTTTTGCCGGGCACCAGAGTGAAGTTAATTGTATCAAATGGGATCCCACAGGTTCATTACTGGCCTCGTGTTCAGATGATAACACTGCAAAGATATGGAGTATGAAGCAAGATAAGTATATTCATGATTTTAGGGAGCATTCCAAGGAGATATATGCTATCAGATGGAGCCCAACTGGTCCTGCTACAAATAACCCTAATAAGAAATTGGTGTTGGCTAGTGCATCAGTTGACTCTACCGTAAAGCTATGGGATGTGGAACTCGGGAAACTAATTCATAGCTTGAATGGACACAGGGATCGTGTATATACTATTGCATTCAGCCCCAATGGTGAGTATTTAGCCAGTGGGTCCCATGACAAATCCATAAATATATGGTCCTTGAATGATGGCAAGATCATTAAAACATACAACGGCAATGGAGGTATTTTTGAGGTCTGTTGGAACAAGGAGGGTGACAAGATTGCTGCCTGTTTTTCTAACAATACAGTTTGCGTTTTGGATTTCAGAATGTAA
Protein sequence

>Msa0835810

MASITSVELNYLVFRYLQESGFTHSAFVFGNEGGINKCPIDGNLVPPGALVTFVQKGLQFLEMEANLNNCDADFDEDFSFLQPLDLITKDVHELKKMINERRRKRQRGKNKESEKEHDGDRGLTREKERQEREKEREKDKEKVENHKEQELQNENQISREMVSDQEDKVNGAKKEDAKKKDKVNGTKKEDAKKEGKVNGAKKEDKVNVKLEEDGAFGGPEPMDICTTSASQPCEFPKSDVTILEGHKSEVCACAWSPTGSFLASGSGDSTARIWTIAEATRKLDSKNDPSTVLVLQHIRGTTTEKNKDVTTLDWNGEGTLLATGSYDGQARIWTANGELKSTLSKHKGPIFSLKWNKKGDYLLTGSFDGSAIVWDVQAEKSKQQFDFHSGSTLDVDWRNNVSFASSSNDTMIHVCKIGENNPVKTFAGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEIYAIRWSPTGPATNNPNKKLVLASASVDSTVKLWDVELGKLIHSLNGHRDRVYTIAFSPNGEYLASGSHDKSINIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAACFSNNTVCVLDFRM*