AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1337680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337680 MtrunA17_Chr4g0072871 96.809 376 11 1 1 376 1 375 0.0 751
Msa1337680 MtrunA17_Chr1g0150471 47.075 359 140 8 20 375 4 315 9.42e-100 298
Msa1337680 MtrunA17_Chr3g0136701 49.167 360 105 10 20 375 4 289 2.00e-88 268
Msa1337680 MtrunA17_Chr7g0220721 64.835 91 32 0 20 110 24 114 4.74e-39 143
Msa1337680 MtrunA17_Chr1g0155811 45.161 93 41 1 22 104 5 97 1.71e-20 90.1
Msa1337680 MtrunA17_Chr5g0429341 43.333 90 51 0 21 110 4 93 1.00e-18 87.0
Msa1337680 MtrunA17_Chr3g0145061 32.331 133 73 2 22 137 5 137 9.95e-17 78.6
Msa1337680 MtrunA17_Chr4g0033641 39.130 92 47 1 22 104 5 96 1.06e-16 79.0
Msa1337680 MtrunA17_Chr7g0268691 39.326 89 53 1 22 110 20 107 2.04e-16 79.7
Msa1337680 MtrunA17_Chr7g0268691 41.176 68 40 0 273 340 302 369 7.87e-11 63.2
Msa1337680 MtrunA17_Chr5g0405151 43.210 81 38 1 21 93 4 84 2.63e-16 76.3
Msa1337680 MtrunA17_Chr4g0035651 40.860 93 45 1 22 104 5 97 3.13e-16 77.0
Msa1337680 MtrunA17_Chr3g0120711 38.889 90 54 1 21 110 4 92 5.16e-15 75.9
Msa1337680 MtrunA17_Chr3g0120711 35.714 112 72 0 232 343 287 398 7.53e-11 63.2
Msa1337680 MtrunA17_Chr2g0329511 36.957 92 49 1 22 104 5 96 5.27e-15 73.9
Msa1337680 MtrunA17_Chr2g0314671 38.043 92 48 1 22 104 5 96 1.82e-14 73.2
Msa1337680 MtrunA17_Chr3g0142221 36.170 94 49 1 22 104 5 98 7.42e-14 70.5
Msa1337680 MtrunA17_Chr8g0390971 54.795 73 31 1 270 342 331 401 1.42e-13 71.6
Msa1337680 MtrunA17_Chr2g0322941 39.024 82 50 0 21 102 43 124 6.24e-13 68.2
Msa1337680 MtrunA17_Chr7g0251781 40.541 74 44 0 22 95 5 78 7.12e-12 66.2
Msa1337680 MtrunA17_Chr5g0431351 53.226 62 26 1 283 341 155 216 1.07e-11 63.9
Msa1337680 MtrunA17_Chr1g0209861 48.052 77 29 2 265 341 359 424 1.37e-11 65.5
Msa1337680 MtrunA17_Chr2g0327621 43.548 62 32 1 287 345 140 201 2.35e-11 63.5
Msa1337680 MtrunA17_Chr2g0322951 59.184 49 20 0 295 343 88 136 4.72e-11 60.5
Msa1337680 MtrunA17_Chr1g0209071 34.146 82 54 0 20 101 3 84 5.65e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1337680 AT5G57660.1 53.385 384 142 10 1 376 1 355 2.84e-118 347
Msa1337680 AT5G24930.1 48.718 390 136 13 20 376 4 362 1.00e-96 292
Msa1337680 AT2G24790.1 50.915 328 97 13 20 343 6 273 2.03e-91 276
Msa1337680 AT3G02380.1 40.270 370 172 12 20 376 14 347 3.21e-79 247
Msa1337680 AT5G15850.1 39.683 378 186 8 13 376 6 355 2.52e-76 240
Msa1337680 AT5G15840.1 38.032 376 208 12 13 376 11 373 3.15e-76 240
Msa1337680 AT2G24790.2 48.276 232 78 10 20 248 6 198 7.09e-56 182
Msa1337680 AT5G15840.2 34.211 228 139 6 13 229 11 238 8.16e-40 142
Msa1337680 AT3G21880.3 26.741 359 219 11 16 340 4 352 1.61e-23 100
Msa1337680 AT3G21880.2 26.741 359 219 11 16 340 4 352 1.61e-23 100
Msa1337680 AT3G21880.1 26.346 353 217 10 22 340 5 348 3.48e-23 99.8
Msa1337680 AT1G49130.1 25.439 342 192 10 19 342 25 321 1.23e-19 89.0
Msa1337680 AT1G49130.2 25.439 342 192 10 19 342 18 314 1.24e-19 89.0
Msa1337680 AT2G33500.2 44.944 89 49 0 22 110 12 100 3.70e-18 85.9
Msa1337680 AT2G33500.1 44.944 89 49 0 22 110 12 100 3.80e-18 85.9
Msa1337680 AT1G28050.1 43.820 89 50 0 22 110 9 97 3.42e-17 83.2
Msa1337680 AT1G75540.1 37.209 129 67 2 22 136 5 133 1.26e-16 80.5
Msa1337680 AT2G21320.1 40.449 89 45 1 21 101 4 92 1.56e-16 77.0
Msa1337680 AT4G38960.1 43.210 81 38 1 21 93 4 84 5.20e-16 75.9
Msa1337680 AT4G38960.6 43.210 81 38 1 21 93 4 84 5.20e-16 75.9
Msa1337680 AT2G47890.2 38.462 91 54 1 20 110 11 99 5.93e-16 77.0
Msa1337680 AT1G06040.1 40.217 92 46 1 22 104 5 96 6.48e-16 77.0
Msa1337680 AT2G47890.3 38.462 91 54 1 20 110 11 99 7.06e-16 77.8
Msa1337680 AT2G47890.1 38.462 91 54 1 20 110 11 99 7.98e-16 78.2
Msa1337680 AT1G06040.2 40.217 92 46 1 22 104 5 96 9.96e-16 75.1
Msa1337680 AT4G15250.1 33.544 158 90 5 22 175 5 151 1.68e-15 77.0
Msa1337680 AT5G48250.1 46.575 73 39 0 21 93 4 76 2.06e-15 77.4
Msa1337680 AT2G31380.1 33.884 121 66 2 22 133 5 120 3.12e-15 75.1
Msa1337680 AT3G07650.3 45.205 73 40 0 21 93 4 76 3.81e-15 76.6
Msa1337680 AT3G07650.2 45.205 73 40 0 21 93 4 76 3.81e-15 76.6
Msa1337680 AT3G07650.4 45.205 73 40 0 21 93 4 76 3.81e-15 76.6
Msa1337680 AT3G07650.1 45.205 73 40 0 21 93 4 76 3.81e-15 76.6
Msa1337680 AT1G78600.1 38.043 92 48 1 22 104 5 96 1.80e-14 73.9
Msa1337680 AT1G78600.2 35.238 105 59 1 22 117 5 109 2.18e-14 73.9
Msa1337680 AT1G73870.1 52.000 75 31 2 272 344 319 390 1.36e-13 72.0
Msa1337680 AT1G68190.1 36.585 82 52 0 20 101 12 93 2.87e-12 67.8
Msa1337680 AT1G68190.3 36.585 82 52 0 20 101 12 93 2.87e-12 67.8
Msa1337680 AT1G68190.2 36.585 82 52 0 20 101 41 122 3.05e-12 67.8
Msa1337680 AT4G39070.1 36.559 93 49 1 22 104 5 97 1.05e-11 64.7
Msa1337680 AT1G68520.1 67.391 46 15 0 299 344 357 402 1.65e-11 65.9
Msa1337680 AT4G10240.1 28.082 146 83 3 22 149 5 146 2.37e-11 62.0
Msa1337680 AT1G25440.1 69.767 43 13 0 299 341 361 403 5.79e-11 63.9

Find 130 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCGGAATCGATGGTTTC+AGG 0.197771 tig0001526:+350112 Msa1337680:CDS
GCGAACCGGCCTTTAATTCT+AGG 0.209256 tig0001526:-350292 None:intergenic
TCAGAGATATCATACAATTT+TGG 0.229801 tig0001526:+350091 Msa1337680:CDS
GGTGAGTTTGATGATTTCTT+AGG 0.235558 tig0001526:-349077 None:intergenic
TTGAGTTTGGATCCGAAATT+AGG 0.238048 tig0001526:-349679 None:intergenic
AGTGGTGAATTTGTTAGATT+TGG 0.277983 tig0001526:+350732 Msa1337680:three_prime_UTR
GTCAGTAGGAACAACGAAAT+TGG 0.281456 tig0001526:-349605 None:intergenic
ATCTTGAGTTTCATTGAGTT+TGG 0.285458 tig0001526:-349692 None:intergenic
TTAAAGAAAGGAGAACTTTA+CGG 0.307730 tig0001526:+350863 Msa1337680:three_prime_UTR
GTCCACATCCGAGTCAATTT+CGG 0.307960 tig0001526:-350323 None:intergenic
TGCTGCAGTTATTGTTGTTC+TGG 0.308773 tig0001526:-349783 None:intergenic
GGAGAACTTTACGGGACTTT+TGG 0.316406 tig0001526:+350872 Msa1337680:three_prime_UTR
GGAATGTGATGGATAGTTAA+AGG 0.317309 tig0001526:-349920 None:intergenic
ATTACTTACGCTATGGCTAA+TGG 0.327776 tig0001526:-349941 None:intergenic
AGAGATGTTCTTCTCTGATA+TGG 0.330404 tig0001526:+349726 Msa1337680:CDS
GAAACCCGGCCTAGAATTAA+AGG 0.334745 tig0001526:+350283 Msa1337680:CDS
TTTGGTTGATAGTATTAATC+TGG 0.339570 tig0001526:+350890 Msa1337680:three_prime_UTR
CTTCCCGCCACGAGCGCGTC+TGG 0.340581 tig0001526:+349380 Msa1337680:CDS
TGCTGCAGCAGCGGCGGTGG+AGG 0.348757 tig0001526:-349572 None:intergenic
ATCTGTATCCCCATTCCTAT+TGG 0.357942 tig0001526:+351026 Msa1337680:three_prime_UTR
CGCTTCTTAGCTTATTTGAA+TGG 0.369817 tig0001526:-349132 None:intergenic
TAAAGAAAGGAGAACTTTAC+GGG 0.370392 tig0001526:+350864 Msa1337680:three_prime_UTR
CTGATTCCGAATCCTAATTT+CGG 0.371287 tig0001526:+349667 Msa1337680:CDS
TTGGCGCGGTTGTACGGTAT+GGG 0.377403 tig0001526:+350751 Msa1337680:three_prime_UTR
ACTTGAATTGAAGATTTGTC+TGG 0.402334 tig0001526:+350809 Msa1337680:three_prime_UTR
TTTCGGTTCGTTTAGCGAAC+CGG 0.407227 tig0001526:-350306 None:intergenic
GGAGTAGGTTTAGTTTGAAC+AGG 0.409524 tig0001526:-349829 None:intergenic
GGCTGCTGCAGCAGCGGCGG+TGG 0.410930 tig0001526:-349575 None:intergenic
CGCGGCTGCTGCAGCAGCGG+CGG 0.413463 tig0001526:-349578 None:intergenic
GAGTTTGTTAGCAGAGTGAA+TGG 0.415127 tig0001526:-349356 None:intergenic
AGGAACAACGCTATCGTTCA+TGG 0.416132 tig0001526:-349809 None:intergenic
GTTCCTACTGACGACGGTTA+CGG 0.428387 tig0001526:+349616 Msa1337680:CDS
GATCGGAATCGATGGTTTCA+GGG 0.428883 tig0001526:+350113 Msa1337680:CDS
AGTTCCTTCATCTATGCTAA+TGG 0.433285 tig0001526:+350375 Msa1337680:CDS
TCAGTCGATTTCTTACCAAC+TGG 0.434072 tig0001526:+350654 Msa1337680:three_prime_UTR
TCTGACACCGTGTTTGCATC+TGG 0.435148 tig0001526:-350073 None:intergenic
TTTGGCGCGGTTGTACGGTA+TGG 0.437776 tig0001526:+350750 Msa1337680:three_prime_UTR
TTAGATTTGGCGCGGTTGTA+CGG 0.448042 tig0001526:+350745 Msa1337680:three_prime_UTR
TTGCTCCTTGCACCACCCCT+TGG 0.448969 tig0001526:-350150 None:intergenic
GAGTAATCAAAATCAAGAAA+TGG 0.454052 tig0001526:-349751 None:intergenic
TATCCCCATTCCTATTGGAT+GGG 0.456584 tig0001526:+351031 Msa1337680:three_prime_UTR
TTGGATCCGAAATTAGGATT+CGG 0.457793 tig0001526:-349673 None:intergenic
GCACCCCATCCAATAGGAAT+GGG 0.458086 tig0001526:-351035 None:intergenic
GTGAGTTTGATGATTTCTTA+GGG 0.461552 tig0001526:-349076 None:intergenic
GTATCCCCATTCCTATTGGA+TGG 0.463059 tig0001526:+351030 Msa1337680:three_prime_UTR
TGTCTCTGATCTTGATCTGA+GGG 0.465071 tig0001526:-350583 None:intergenic
TGGCGCGGTTGTACGGTATG+GGG 0.469487 tig0001526:+350752 Msa1337680:three_prime_UTR
TAGCATAACATAACATAAGA+TGG 0.472064 tig0001526:+349195 Msa1337680:exon
GCTTTGCACGTGACGGAAGC+TGG 0.472622 tig0001526:-349427 None:intergenic
AAAGTGGGAACGACGCCGTA+TGG 0.475583 tig0001526:-350403 None:intergenic
GGAGTGGCACCCCATCCAAT+AGG 0.476032 tig0001526:-351041 None:intergenic
GCTTCTTAGCTTATTTGAAT+GGG 0.479060 tig0001526:-349131 None:intergenic
AACCGAAATTGACTCGGATG+TGG 0.481901 tig0001526:+350321 Msa1337680:CDS
CCGGCCTTTAATTCTAGGCC+GGG 0.498099 tig0001526:-350287 None:intergenic
ACCGGCCTTTAATTCTAGGC+CGG 0.502804 tig0001526:-350288 None:intergenic
GGAACTGCGAGAGGATCAGC+AGG 0.506955 tig0001526:-350358 None:intergenic
TGTTTGAATGAATTTGAGTT+GGG 0.508113 tig0001526:-349098 None:intergenic
TTGTCTCTGATCTTGATCTG+AGG 0.511866 tig0001526:-350584 None:intergenic
AGACGCGGCTGCTGCAGCAG+CGG 0.512635 tig0001526:-349581 None:intergenic
AGCAACACAATTATGTGGAA+TGG 0.513777 tig0001526:+350168 Msa1337680:CDS
ATTATTGTTAGGATGAAAAG+TGG 0.515233 tig0001526:+350714 Msa1337680:three_prime_UTR
AACACATTGAACCATGGTAT+AGG 0.516553 tig0001526:-350465 None:intergenic
GAGTCAAAGAAAGGCTCGAC+GGG 0.517190 tig0001526:-349529 None:intergenic
TTGCAAGAATCACATAGCTT+AGG 0.521043 tig0001526:-349268 None:intergenic
TACAGATACAGCTTGAGAAA+AGG 0.522004 tig0001526:-351062 None:intergenic
CATAAGATGGGTATTGAAAG+AGG 0.525020 tig0001526:+349208 Msa1337680:exon
ATTAAAACAGTTGATCCAGT+TGG 0.525383 tig0001526:-350669 None:intergenic
GGCACCCCATCCAATAGGAA+TGG 0.527469 tig0001526:-351036 None:intergenic
TTGTTTGAATGAATTTGAGT+TGG 0.539673 tig0001526:-349099 None:intergenic
ATGCTAATGGACTGTCCATA+CGG 0.541142 tig0001526:+350388 Msa1337680:CDS
TTTGATGATTTCTTAGGGTG+CGG 0.546755 tig0001526:-349071 None:intergenic
ATCCCCATTCCTATTGGATG+GGG 0.548830 tig0001526:+351032 Msa1337680:three_prime_UTR
GAGCGAGTGGATTGGCGGAG+TGG 0.557021 tig0001526:-349489 None:intergenic
TTTCTAATGGGATCAGATCA+CGG 0.558451 tig0001526:+350997 Msa1337680:three_prime_UTR
TGCGTCAGCTTTGCACGTGA+CGG 0.560515 tig0001526:-349434 None:intergenic
TTATGAGGTACAGAGAGAAG+AGG 0.563746 tig0001526:+350206 Msa1337680:CDS
TTACACATCGCGCACTAATG+AGG 0.564234 tig0001526:+350625 Msa1337680:three_prime_UTR
TGGATTGGCGGAGTGGATGT+CGG 0.572687 tig0001526:-349482 None:intergenic
AGTAACCAAGGGGTGGTGCA+AGG 0.573333 tig0001526:+350145 Msa1337680:CDS
ATCGGAATCGATGGTTTCAG+GGG 0.573412 tig0001526:+350114 Msa1337680:CDS
AGCATAACATAACATAAGAT+GGG 0.574108 tig0001526:+349196 Msa1337680:exon
TTTGTTAGCAGAGTGAATGG+TGG 0.574357 tig0001526:-349353 None:intergenic
CAAGAATCACATAGCTTAGG+TGG 0.574456 tig0001526:-349265 None:intergenic
GATTAGTGATGATGATTCTG+TGG 0.575368 tig0001526:+350502 Msa1337680:three_prime_UTR
GATTCAGCGGAGTCAAAGAA+AGG 0.575805 tig0001526:-349538 None:intergenic
GTGACGACGAGCGAGTGGAT+TGG 0.575999 tig0001526:-349497 None:intergenic
TTATGATTCATCATCCGCGC+TGG 0.581963 tig0001526:-349850 None:intergenic
CAGTCCATTAGCATAGATGA+AGG 0.582055 tig0001526:-350379 None:intergenic
TCTTAGCTTATTTGAATGGG+AGG 0.591279 tig0001526:-349128 None:intergenic
TGGAATGGATCGTGAAGCGA+GGG 0.592479 tig0001526:+350183 Msa1337680:CDS
ACGACGAGCGAGTGGATTGG+CGG 0.592706 tig0001526:-349494 None:intergenic
CAAGGAGCAACACAATTATG+TGG 0.592806 tig0001526:+350163 Msa1337680:CDS
TGTATGTATAGTCAAGTGAC+TGG 0.593195 tig0001526:-349037 None:intergenic
ATGATGAATCATAACTCAGA+AGG 0.596503 tig0001526:+349859 Msa1337680:CDS
GATCAGCAGGGTTATAGAGA+CGG 0.597767 tig0001526:-350345 None:intergenic
CGTTCGTGACGACGAGCGAG+TGG 0.599256 tig0001526:-349502 None:intergenic
ATCGTGAAGCGAGGGTTATG+AGG 0.603818 tig0001526:+350191 Msa1337680:CDS
TTCATCATCCGCGCTGGAGT+AGG 0.609886 tig0001526:-349844 None:intergenic
CCCGGCCTAGAATTAAAGGC+CGG 0.612766 tig0001526:+350287 Msa1337680:CDS
CTATGGCTAATGGAATGTGA+TGG 0.620066 tig0001526:-349931 None:intergenic
ATAAGCGATTTCATTAGTAG+TGG 0.621437 tig0001526:+349172 Msa1337680:five_prime_UTR
ATCTTCACTTGACGTAGGAG+TGG 0.622983 tig0001526:+350048 Msa1337680:CDS
TATTCTAACACATTGAACCA+TGG 0.625616 tig0001526:-350471 None:intergenic
TCGTCATCTTCACTTGACGT+AGG 0.628545 tig0001526:+350043 Msa1337680:CDS
GGGGTGTGAATAGTAACCAA+GGG 0.630822 tig0001526:+350134 Msa1337680:CDS
GGATTTGACGACGGATTCAG+CGG 0.633353 tig0001526:-349551 None:intergenic
GAAAAGCTTATGCAGAAACC+CGG 0.633617 tig0001526:+350269 Msa1337680:CDS
GTGGAATGGATCGTGAAGCG+AGG 0.634097 tig0001526:+350182 Msa1337680:CDS
GGAGTCAAAGAAAGGCTCGA+CGG 0.644574 tig0001526:-349530 None:intergenic
CACACATCCAGACGCGCTCG+TGG 0.646583 tig0001526:-349387 None:intergenic
AGTGGTGCCAGATGCAAACA+CGG 0.653433 tig0001526:+350066 Msa1337680:CDS
ATAGATGAAGGAACTGCGAG+AGG 0.656412 tig0001526:-350367 None:intergenic
AACAACGAAATTGGAAGACG+CGG 0.657317 tig0001526:-349596 None:intergenic
TAAACGAACCGAAATTGACT+CGG 0.658214 tig0001526:+350315 Msa1337680:CDS
TTCGTTGTTCCTACTGACGA+CGG 0.659626 tig0001526:+349610 Msa1337680:CDS
ATTAGTGATGATGATTCTGT+GGG 0.668921 tig0001526:+350503 Msa1337680:three_prime_UTR
CACCCCATCCAATAGGAATG+GGG 0.670692 tig0001526:-351034 None:intergenic
ATAGAAACGCAGAATCAGAA+CGG 0.671868 tig0001526:-349315 None:intergenic
GGCGGTGGAGGATTTGACGA+CGG 0.677124 tig0001526:-349560 None:intergenic
AGTATGAATCTCCTATACCA+TGG 0.679029 tig0001526:+350454 Msa1337680:three_prime_UTR
TGAATTTGTTAGATTTGGCG+CGG 0.681844 tig0001526:+350737 Msa1337680:three_prime_UTR
AAACAAGGTCAGGATAACAG+AGG 0.687745 tig0001526:+350431 Msa1337680:three_prime_UTR
ATACAGCTTGAGAAAAGGAG+TGG 0.688833 tig0001526:-351057 None:intergenic
TGTGAATAGTAACCAAGGGG+TGG 0.689533 tig0001526:+350138 Msa1337680:CDS
TCGGAATCGATGGTTTCAGG+GGG 0.701775 tig0001526:+350115 Msa1337680:CDS
ATGATGCTGAAGCAGCTGCG+TGG 0.709512 tig0001526:+349644 Msa1337680:CDS
GGGTGTGAATAGTAACCAAG+GGG 0.734808 tig0001526:+350135 Msa1337680:CDS
AAGATGGGTATTGAAAGAGG+AGG 0.750089 tig0001526:+349211 Msa1337680:exon
AAACTAAACCTACTCCAGCG+CGG 0.776053 tig0001526:+349836 Msa1337680:CDS
GAACTGCGAGAGGATCAGCA+GGG 0.795439 tig0001526:-350357 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAACAAAATAATCAAA+CGG - tig0001526:350531-350550 None:intergenic 10.0%
!! ATAAAAACAAAATAATCAAA+CGG - tig0001526:350531-350550 None:intergenic 10.0%
!! TTAATTAATTACTTACGCTA+TGG - tig0001526:349951-349970 None:intergenic 20.0%
!! TAACAAGCAAAAGTAAAAAA+CGG - tig0001526:350846-350865 None:intergenic 20.0%
!! TTAATTAATTACTTACGCTA+TGG - tig0001526:349951-349970 None:intergenic 20.0%
!! TAACAAGCAAAAGTAAAAAA+CGG - tig0001526:350846-350865 None:intergenic 20.0%
!! TGTTTGAATGAATTTGAGTT+GGG - tig0001526:349101-349120 None:intergenic 25.0%
! TTGTTTGAATGAATTTGAGT+TGG - tig0001526:349102-349121 None:intergenic 25.0%
! TAGCATAACATAACATAAGA+TGG + tig0001526:349195-349214 Msa1337680:exon 25.0%
! AGCATAACATAACATAAGAT+GGG + tig0001526:349196-349215 Msa1337680:exon 25.0%
! GAGTAATCAAAATCAAGAAA+TGG - tig0001526:349754-349773 None:intergenic 25.0%
!! TCAGAGATATCATACAATTT+TGG + tig0001526:350091-350110 Msa1337680:CDS 25.0%
!! GATATCATACAATTTTGGAT+CGG + tig0001526:350096-350115 Msa1337680:CDS 25.0%
! ATTATTGTTAGGATGAAAAG+TGG + tig0001526:350714-350733 Msa1337680:three_prime_UTR 25.0%
! AACAAGCAAAAGTAAAAAAC+GGG - tig0001526:350845-350864 None:intergenic 25.0%
!!! TACTTTTGCTTGTTAAAGAA+AGG + tig0001526:350851-350870 Msa1337680:three_prime_UTR 25.0%
! TTAAAGAAAGGAGAACTTTA+CGG + tig0001526:350863-350882 Msa1337680:three_prime_UTR 25.0%
!!! TTTGGTTGATAGTATTAATC+TGG + tig0001526:350890-350909 Msa1337680:three_prime_UTR 25.0%
!!! AGAAAAGTGTCTTTTTCTAA+TGG + tig0001526:350984-351003 Msa1337680:three_prime_UTR 25.0%
!!! GAAAAGTGTCTTTTTCTAAT+GGG + tig0001526:350985-351004 Msa1337680:three_prime_UTR 25.0%
! CTTCAGAAAAAAGAAAAACA+CGG - tig0001526:351089-351108 None:intergenic 25.0%
!! TGTTTGAATGAATTTGAGTT+GGG - tig0001526:349101-349120 None:intergenic 25.0%
! TTGTTTGAATGAATTTGAGT+TGG - tig0001526:349102-349121 None:intergenic 25.0%
! TAGCATAACATAACATAAGA+TGG + tig0001526:349195-349214 Msa1337680:exon 25.0%
! AGCATAACATAACATAAGAT+GGG + tig0001526:349196-349215 Msa1337680:exon 25.0%
! GAGTAATCAAAATCAAGAAA+TGG - tig0001526:349754-349773 None:intergenic 25.0%
!! TCAGAGATATCATACAATTT+TGG + tig0001526:350091-350110 Msa1337680:CDS 25.0%
!! GATATCATACAATTTTGGAT+CGG + tig0001526:350096-350115 Msa1337680:CDS 25.0%
! ATTATTGTTAGGATGAAAAG+TGG + tig0001526:350714-350733 Msa1337680:three_prime_UTR 25.0%
! AACAAGCAAAAGTAAAAAAC+GGG - tig0001526:350845-350864 None:intergenic 25.0%
!!! TACTTTTGCTTGTTAAAGAA+AGG + tig0001526:350851-350870 Msa1337680:three_prime_UTR 25.0%
! TTAAAGAAAGGAGAACTTTA+CGG + tig0001526:350863-350882 Msa1337680:three_prime_UTR 25.0%
!!! TTTGGTTGATAGTATTAATC+TGG + tig0001526:350890-350909 Msa1337680:three_prime_UTR 25.0%
!!! AGAAAAGTGTCTTTTTCTAA+TGG + tig0001526:350984-351003 Msa1337680:three_prime_UTR 25.0%
!!! GAAAAGTGTCTTTTTCTAAT+GGG + tig0001526:350985-351004 Msa1337680:three_prime_UTR 25.0%
! CTTCAGAAAAAAGAAAAACA+CGG - tig0001526:351089-351108 None:intergenic 25.0%
! GTGAGTTTGATGATTTCTTA+GGG - tig0001526:349079-349098 None:intergenic 30.0%
GCTTCTTAGCTTATTTGAAT+GGG - tig0001526:349134-349153 None:intergenic 30.0%
ATAAGCGATTTCATTAGTAG+TGG + tig0001526:349172-349191 Msa1337680:five_prime_UTR 30.0%
ATCTTGAGTTTCATTGAGTT+TGG - tig0001526:349695-349714 None:intergenic 30.0%
ATGATGAATCATAACTCAGA+AGG + tig0001526:349859-349878 Msa1337680:CDS 30.0%
!! TGATTTGGTTTGTTATTAGC+AGG + tig0001526:350018-350037 Msa1337680:intron 30.0%
! GAATAGTCTTCTCGAATTTT+CGG - tig0001526:350237-350256 None:intergenic 30.0%
!!! TTCCCACTTTTTAGTAAACA+AGG + tig0001526:350416-350435 Msa1337680:exon 30.0%
! GACCTTGTTTACTAAAAAGT+GGG - tig0001526:350421-350440 None:intergenic 30.0%
! TGACCTTGTTTACTAAAAAG+TGG - tig0001526:350422-350441 None:intergenic 30.0%
!! ACTTTTTAGTAAACAAGGTC+AGG + tig0001526:350421-350440 Msa1337680:exon 30.0%
TATTCTAACACATTGAACCA+TGG - tig0001526:350474-350493 None:intergenic 30.0%
! ATTAGTGATGATGATTCTGT+GGG + tig0001526:350503-350522 Msa1337680:three_prime_UTR 30.0%
ATTAAAACAGTTGATCCAGT+TGG - tig0001526:350672-350691 None:intergenic 30.0%
!! AGTGGTGAATTTGTTAGATT+TGG + tig0001526:350732-350751 Msa1337680:three_prime_UTR 30.0%
ACTTGAATTGAAGATTTGTC+TGG + tig0001526:350809-350828 Msa1337680:three_prime_UTR 30.0%
TAAAGAAAGGAGAACTTTAC+GGG + tig0001526:350864-350883 Msa1337680:three_prime_UTR 30.0%
! GTGAGTTTGATGATTTCTTA+GGG - tig0001526:349079-349098 None:intergenic 30.0%
GCTTCTTAGCTTATTTGAAT+GGG - tig0001526:349134-349153 None:intergenic 30.0%
ATAAGCGATTTCATTAGTAG+TGG + tig0001526:349172-349191 Msa1337680:five_prime_UTR 30.0%
ATCTTGAGTTTCATTGAGTT+TGG - tig0001526:349695-349714 None:intergenic 30.0%
ATGATGAATCATAACTCAGA+AGG + tig0001526:349859-349878 Msa1337680:CDS 30.0%
!! TGATTTGGTTTGTTATTAGC+AGG + tig0001526:350018-350037 Msa1337680:intron 30.0%
! GAATAGTCTTCTCGAATTTT+CGG - tig0001526:350237-350256 None:intergenic 30.0%
!!! TTCCCACTTTTTAGTAAACA+AGG + tig0001526:350416-350435 Msa1337680:exon 30.0%
! GACCTTGTTTACTAAAAAGT+GGG - tig0001526:350421-350440 None:intergenic 30.0%
! TGACCTTGTTTACTAAAAAG+TGG - tig0001526:350422-350441 None:intergenic 30.0%
!! ACTTTTTAGTAAACAAGGTC+AGG + tig0001526:350421-350440 Msa1337680:exon 30.0%
TATTCTAACACATTGAACCA+TGG - tig0001526:350474-350493 None:intergenic 30.0%
! ATTAGTGATGATGATTCTGT+GGG + tig0001526:350503-350522 Msa1337680:three_prime_UTR 30.0%
ATTAAAACAGTTGATCCAGT+TGG - tig0001526:350672-350691 None:intergenic 30.0%
!! AGTGGTGAATTTGTTAGATT+TGG + tig0001526:350732-350751 Msa1337680:three_prime_UTR 30.0%
ACTTGAATTGAAGATTTGTC+TGG + tig0001526:350809-350828 Msa1337680:three_prime_UTR 30.0%
TAAAGAAAGGAGAACTTTAC+GGG + tig0001526:350864-350883 Msa1337680:three_prime_UTR 30.0%
TGTATGTATAGTCAAGTGAC+TGG - tig0001526:349040-349059 None:intergenic 35.0%
! TTTGATGATTTCTTAGGGTG+CGG - tig0001526:349074-349093 None:intergenic 35.0%
! GGTGAGTTTGATGATTTCTT+AGG - tig0001526:349080-349099 None:intergenic 35.0%
TCTTAGCTTATTTGAATGGG+AGG - tig0001526:349131-349150 None:intergenic 35.0%
CGCTTCTTAGCTTATTTGAA+TGG - tig0001526:349135-349154 None:intergenic 35.0%
!! CATAAGATGGGTATTGAAAG+AGG + tig0001526:349208-349227 Msa1337680:exon 35.0%
TTGCAAGAATCACATAGCTT+AGG - tig0001526:349271-349290 None:intergenic 35.0%
ATAGAAACGCAGAATCAGAA+CGG - tig0001526:349318-349337 None:intergenic 35.0%
CTGATTCCGAATCCTAATTT+CGG + tig0001526:349667-349686 Msa1337680:CDS 35.0%
TTGGATCCGAAATTAGGATT+CGG - tig0001526:349676-349695 None:intergenic 35.0%
TTGAGTTTGGATCCGAAATT+AGG - tig0001526:349682-349701 None:intergenic 35.0%
AGAGATGTTCTTCTCTGATA+TGG + tig0001526:349726-349745 Msa1337680:CDS 35.0%
!! GGAATGTGATGGATAGTTAA+AGG - tig0001526:349923-349942 None:intergenic 35.0%
ATTACTTACGCTATGGCTAA+TGG - tig0001526:349944-349963 None:intergenic 35.0%
AGCAACACAATTATGTGGAA+TGG + tig0001526:350168-350187 Msa1337680:CDS 35.0%
TAAACGAACCGAAATTGACT+CGG + tig0001526:350315-350334 Msa1337680:CDS 35.0%
AGTTCCTTCATCTATGCTAA+TGG + tig0001526:350375-350394 Msa1337680:CDS 35.0%
AGTATGAATCTCCTATACCA+TGG + tig0001526:350454-350473 Msa1337680:three_prime_UTR 35.0%
AACACATTGAACCATGGTAT+AGG - tig0001526:350468-350487 None:intergenic 35.0%
! GATTAGTGATGATGATTCTG+TGG + tig0001526:350502-350521 Msa1337680:three_prime_UTR 35.0%
!! TGAATTTGTTAGATTTGGCG+CGG + tig0001526:350737-350756 Msa1337680:three_prime_UTR 35.0%
TTTCTAATGGGATCAGATCA+CGG + tig0001526:350997-351016 Msa1337680:three_prime_UTR 35.0%
TACAGATACAGCTTGAGAAA+AGG - tig0001526:351065-351084 None:intergenic 35.0%
TGTATGTATAGTCAAGTGAC+TGG - tig0001526:349040-349059 None:intergenic 35.0%
! TTTGATGATTTCTTAGGGTG+CGG - tig0001526:349074-349093 None:intergenic 35.0%
! GGTGAGTTTGATGATTTCTT+AGG - tig0001526:349080-349099 None:intergenic 35.0%
TCTTAGCTTATTTGAATGGG+AGG - tig0001526:349131-349150 None:intergenic 35.0%
CGCTTCTTAGCTTATTTGAA+TGG - tig0001526:349135-349154 None:intergenic 35.0%
!! CATAAGATGGGTATTGAAAG+AGG + tig0001526:349208-349227 Msa1337680:exon 35.0%
TTGCAAGAATCACATAGCTT+AGG - tig0001526:349271-349290 None:intergenic 35.0%
ATAGAAACGCAGAATCAGAA+CGG - tig0001526:349318-349337 None:intergenic 35.0%
CTGATTCCGAATCCTAATTT+CGG + tig0001526:349667-349686 Msa1337680:CDS 35.0%
TTGGATCCGAAATTAGGATT+CGG - tig0001526:349676-349695 None:intergenic 35.0%
TTGAGTTTGGATCCGAAATT+AGG - tig0001526:349682-349701 None:intergenic 35.0%
AGAGATGTTCTTCTCTGATA+TGG + tig0001526:349726-349745 Msa1337680:CDS 35.0%
!! GGAATGTGATGGATAGTTAA+AGG - tig0001526:349923-349942 None:intergenic 35.0%
ATTACTTACGCTATGGCTAA+TGG - tig0001526:349944-349963 None:intergenic 35.0%
AGCAACACAATTATGTGGAA+TGG + tig0001526:350168-350187 Msa1337680:CDS 35.0%
TAAACGAACCGAAATTGACT+CGG + tig0001526:350315-350334 Msa1337680:CDS 35.0%
AGTTCCTTCATCTATGCTAA+TGG + tig0001526:350375-350394 Msa1337680:CDS 35.0%
AGTATGAATCTCCTATACCA+TGG + tig0001526:350454-350473 Msa1337680:three_prime_UTR 35.0%
AACACATTGAACCATGGTAT+AGG - tig0001526:350468-350487 None:intergenic 35.0%
! GATTAGTGATGATGATTCTG+TGG + tig0001526:350502-350521 Msa1337680:three_prime_UTR 35.0%
!! TGAATTTGTTAGATTTGGCG+CGG + tig0001526:350737-350756 Msa1337680:three_prime_UTR 35.0%
TTTCTAATGGGATCAGATCA+CGG + tig0001526:350997-351016 Msa1337680:three_prime_UTR 35.0%
TACAGATACAGCTTGAGAAA+AGG - tig0001526:351065-351084 None:intergenic 35.0%
!! AAGATGGGTATTGAAAGAGG+AGG + tig0001526:349211-349230 Msa1337680:exon 40.0%
! GGACTAAAGAGTTTTCGAAG+CGG + tig0001526:349232-349251 Msa1337680:CDS 40.0%
CAAGAATCACATAGCTTAGG+TGG - tig0001526:349268-349287 None:intergenic 40.0%
TTTGTTAGCAGAGTGAATGG+TGG - tig0001526:349356-349375 None:intergenic 40.0%
!! GAGTTTGTTAGCAGAGTGAA+TGG - tig0001526:349359-349378 None:intergenic 40.0%
AACAACGAAATTGGAAGACG+CGG - tig0001526:349599-349618 None:intergenic 40.0%
GTCAGTAGGAACAACGAAAT+TGG - tig0001526:349608-349627 None:intergenic 40.0%
! TGCTGCAGTTATTGTTGTTC+TGG - tig0001526:349786-349805 None:intergenic 40.0%
!! GGAGTAGGTTTAGTTTGAAC+AGG - tig0001526:349832-349851 None:intergenic 40.0%
CTATGGCTAATGGAATGTGA+TGG - tig0001526:349934-349953 None:intergenic 40.0%
! CAATTTTGGATCGGAATCGA+TGG + tig0001526:350105-350124 Msa1337680:CDS 40.0%
CAAGGAGCAACACAATTATG+TGG + tig0001526:350163-350182 Msa1337680:CDS 40.0%
TTATGAGGTACAGAGAGAAG+AGG + tig0001526:350206-350225 Msa1337680:CDS 40.0%
GAAAAGCTTATGCAGAAACC+CGG + tig0001526:350269-350288 Msa1337680:CDS 40.0%
CAGTCCATTAGCATAGATGA+AGG - tig0001526:350382-350401 None:intergenic 40.0%
!! ATGCTAATGGACTGTCCATA+CGG + tig0001526:350388-350407 Msa1337680:CDS 40.0%
AAACAAGGTCAGGATAACAG+AGG + tig0001526:350431-350450 Msa1337680:three_prime_UTR 40.0%
TGTCTCTGATCTTGATCTGA+GGG - tig0001526:350586-350605 None:intergenic 40.0%
TTGTCTCTGATCTTGATCTG+AGG - tig0001526:350587-350606 None:intergenic 40.0%
! TCAGTCGATTTCTTACCAAC+TGG + tig0001526:350654-350673 Msa1337680:three_prime_UTR 40.0%
! AAGAGCATGGTGAAAAAGCT+TGG + tig0001526:350782-350801 Msa1337680:three_prime_UTR 40.0%
ATCTGTATCCCCATTCCTAT+TGG + tig0001526:351026-351045 Msa1337680:three_prime_UTR 40.0%
TATCCCCATTCCTATTGGAT+GGG + tig0001526:351031-351050 Msa1337680:three_prime_UTR 40.0%
ATACAGCTTGAGAAAAGGAG+TGG - tig0001526:351060-351079 None:intergenic 40.0%
!! AAGATGGGTATTGAAAGAGG+AGG + tig0001526:349211-349230 Msa1337680:exon 40.0%
! GGACTAAAGAGTTTTCGAAG+CGG + tig0001526:349232-349251 Msa1337680:CDS 40.0%
CAAGAATCACATAGCTTAGG+TGG - tig0001526:349268-349287 None:intergenic 40.0%
TTTGTTAGCAGAGTGAATGG+TGG - tig0001526:349356-349375 None:intergenic 40.0%
!! GAGTTTGTTAGCAGAGTGAA+TGG - tig0001526:349359-349378 None:intergenic 40.0%
AACAACGAAATTGGAAGACG+CGG - tig0001526:349599-349618 None:intergenic 40.0%
GTCAGTAGGAACAACGAAAT+TGG - tig0001526:349608-349627 None:intergenic 40.0%
! TGCTGCAGTTATTGTTGTTC+TGG - tig0001526:349786-349805 None:intergenic 40.0%
!! GGAGTAGGTTTAGTTTGAAC+AGG - tig0001526:349832-349851 None:intergenic 40.0%
CTATGGCTAATGGAATGTGA+TGG - tig0001526:349934-349953 None:intergenic 40.0%
! CAATTTTGGATCGGAATCGA+TGG + tig0001526:350105-350124 Msa1337680:CDS 40.0%
CAAGGAGCAACACAATTATG+TGG + tig0001526:350163-350182 Msa1337680:CDS 40.0%
TTATGAGGTACAGAGAGAAG+AGG + tig0001526:350206-350225 Msa1337680:CDS 40.0%
GAAAAGCTTATGCAGAAACC+CGG + tig0001526:350269-350288 Msa1337680:CDS 40.0%
CAGTCCATTAGCATAGATGA+AGG - tig0001526:350382-350401 None:intergenic 40.0%
!! ATGCTAATGGACTGTCCATA+CGG + tig0001526:350388-350407 Msa1337680:CDS 40.0%
AAACAAGGTCAGGATAACAG+AGG + tig0001526:350431-350450 Msa1337680:three_prime_UTR 40.0%
TGTCTCTGATCTTGATCTGA+GGG - tig0001526:350586-350605 None:intergenic 40.0%
TTGTCTCTGATCTTGATCTG+AGG - tig0001526:350587-350606 None:intergenic 40.0%
! TCAGTCGATTTCTTACCAAC+TGG + tig0001526:350654-350673 Msa1337680:three_prime_UTR 40.0%
! AAGAGCATGGTGAAAAAGCT+TGG + tig0001526:350782-350801 Msa1337680:three_prime_UTR 40.0%
ATCTGTATCCCCATTCCTAT+TGG + tig0001526:351026-351045 Msa1337680:three_prime_UTR 40.0%
TATCCCCATTCCTATTGGAT+GGG + tig0001526:351031-351050 Msa1337680:three_prime_UTR 40.0%
ATACAGCTTGAGAAAAGGAG+TGG - tig0001526:351060-351079 None:intergenic 40.0%
! TAAAGAGTTTTCGAAGCGGC+TGG + tig0001526:349236-349255 Msa1337680:CDS 45.0%
ATCAGAACGGCAAAAAAGCG+CGG - tig0001526:349305-349324 None:intergenic 45.0%
GATTCAGCGGAGTCAAAGAA+AGG - tig0001526:349541-349560 None:intergenic 45.0%
TTCGTTGTTCCTACTGACGA+CGG + tig0001526:349610-349629 Msa1337680:CDS 45.0%
AGGAACAACGCTATCGTTCA+TGG - tig0001526:349812-349831 None:intergenic 45.0%
AAACTAAACCTACTCCAGCG+CGG + tig0001526:349836-349855 Msa1337680:CDS 45.0%
TTATGATTCATCATCCGCGC+TGG - tig0001526:349853-349872 None:intergenic 45.0%
TCGTCATCTTCACTTGACGT+AGG + tig0001526:350043-350062 Msa1337680:CDS 45.0%
ATCTTCACTTGACGTAGGAG+TGG + tig0001526:350048-350067 Msa1337680:CDS 45.0%
GATCGGAATCGATGGTTTCA+GGG + tig0001526:350113-350132 Msa1337680:CDS 45.0%
ATCGGAATCGATGGTTTCAG+GGG + tig0001526:350114-350133 Msa1337680:CDS 45.0%
GGGGTGTGAATAGTAACCAA+GGG + tig0001526:350134-350153 Msa1337680:CDS 45.0%
GGGTGTGAATAGTAACCAAG+GGG + tig0001526:350135-350154 Msa1337680:CDS 45.0%
TGTGAATAGTAACCAAGGGG+TGG + tig0001526:350138-350157 Msa1337680:CDS 45.0%
GAAACCCGGCCTAGAATTAA+AGG + tig0001526:350283-350302 Msa1337680:CDS 45.0%
! TTTCGGTTCGTTTAGCGAAC+CGG - tig0001526:350309-350328 None:intergenic 45.0%
!! AACCGAAATTGACTCGGATG+TGG + tig0001526:350321-350340 Msa1337680:CDS 45.0%
GTCCACATCCGAGTCAATTT+CGG - tig0001526:350326-350345 None:intergenic 45.0%
GATCAGCAGGGTTATAGAGA+CGG - tig0001526:350348-350367 None:intergenic 45.0%
ATAGATGAAGGAACTGCGAG+AGG - tig0001526:350370-350389 None:intergenic 45.0%
TTACACATCGCGCACTAATG+AGG + tig0001526:350625-350644 Msa1337680:three_prime_UTR 45.0%
TTAGATTTGGCGCGGTTGTA+CGG + tig0001526:350745-350764 Msa1337680:three_prime_UTR 45.0%
! GGAGAACTTTACGGGACTTT+TGG + tig0001526:350872-350891 Msa1337680:three_prime_UTR 45.0%
GTATCCCCATTCCTATTGGA+TGG + tig0001526:351030-351049 Msa1337680:three_prime_UTR 45.0%
ATCCCCATTCCTATTGGATG+GGG + tig0001526:351032-351051 Msa1337680:three_prime_UTR 45.0%
! GTATAGTCAAGTGACTGGTC+AGG - tig0001526:349035-349054 None:intergenic 45.0%
! TAAAGAGTTTTCGAAGCGGC+TGG + tig0001526:349236-349255 Msa1337680:CDS 45.0%
ATCAGAACGGCAAAAAAGCG+CGG - tig0001526:349305-349324 None:intergenic 45.0%
GATTCAGCGGAGTCAAAGAA+AGG - tig0001526:349541-349560 None:intergenic 45.0%
TTCGTTGTTCCTACTGACGA+CGG + tig0001526:349610-349629 Msa1337680:CDS 45.0%
AGGAACAACGCTATCGTTCA+TGG - tig0001526:349812-349831 None:intergenic 45.0%
AAACTAAACCTACTCCAGCG+CGG + tig0001526:349836-349855 Msa1337680:CDS 45.0%
TTATGATTCATCATCCGCGC+TGG - tig0001526:349853-349872 None:intergenic 45.0%
TCGTCATCTTCACTTGACGT+AGG + tig0001526:350043-350062 Msa1337680:CDS 45.0%
ATCTTCACTTGACGTAGGAG+TGG + tig0001526:350048-350067 Msa1337680:CDS 45.0%
GATCGGAATCGATGGTTTCA+GGG + tig0001526:350113-350132 Msa1337680:CDS 45.0%
ATCGGAATCGATGGTTTCAG+GGG + tig0001526:350114-350133 Msa1337680:CDS 45.0%
GGGGTGTGAATAGTAACCAA+GGG + tig0001526:350134-350153 Msa1337680:CDS 45.0%
GGGTGTGAATAGTAACCAAG+GGG + tig0001526:350135-350154 Msa1337680:CDS 45.0%
TGTGAATAGTAACCAAGGGG+TGG + tig0001526:350138-350157 Msa1337680:CDS 45.0%
GAAACCCGGCCTAGAATTAA+AGG + tig0001526:350283-350302 Msa1337680:CDS 45.0%
! TTTCGGTTCGTTTAGCGAAC+CGG - tig0001526:350309-350328 None:intergenic 45.0%
!! AACCGAAATTGACTCGGATG+TGG + tig0001526:350321-350340 Msa1337680:CDS 45.0%
GTCCACATCCGAGTCAATTT+CGG - tig0001526:350326-350345 None:intergenic 45.0%
GATCAGCAGGGTTATAGAGA+CGG - tig0001526:350348-350367 None:intergenic 45.0%
ATAGATGAAGGAACTGCGAG+AGG - tig0001526:350370-350389 None:intergenic 45.0%
TTACACATCGCGCACTAATG+AGG + tig0001526:350625-350644 Msa1337680:three_prime_UTR 45.0%
TTAGATTTGGCGCGGTTGTA+CGG + tig0001526:350745-350764 Msa1337680:three_prime_UTR 45.0%
! GGAGAACTTTACGGGACTTT+TGG + tig0001526:350872-350891 Msa1337680:three_prime_UTR 45.0%
GTATCCCCATTCCTATTGGA+TGG + tig0001526:351030-351049 Msa1337680:three_prime_UTR 45.0%
ATCCCCATTCCTATTGGATG+GGG + tig0001526:351032-351051 Msa1337680:three_prime_UTR 45.0%
!! TTAATTAATTAATAATGATT+TGG + tig0001526:350003-350022 Msa1337680:intron 5.0%
!! TTATTATTATTATTATTGTT+AGG + tig0001526:350703-350722 Msa1337680:three_prime_UTR 5.0%
!! TTAATTAATTAATAATGATT+TGG + tig0001526:350003-350022 Msa1337680:intron 5.0%
!! TTATTATTATTATTATTGTT+AGG + tig0001526:350703-350722 Msa1337680:three_prime_UTR 5.0%
GAGTCAAAGAAAGGCTCGAC+GGG - tig0001526:349532-349551 None:intergenic 50.0%
GGAGTCAAAGAAAGGCTCGA+CGG - tig0001526:349533-349552 None:intergenic 50.0%
! GGATTTGACGACGGATTCAG+CGG - tig0001526:349554-349573 None:intergenic 50.0%
GTTCCTACTGACGACGGTTA+CGG + tig0001526:349616-349635 Msa1337680:CDS 50.0%
! AGTGGTGCCAGATGCAAACA+CGG + tig0001526:350066-350085 Msa1337680:CDS 50.0%
TCTGACACCGTGTTTGCATC+TGG - tig0001526:350076-350095 None:intergenic 50.0%
GGATCGGAATCGATGGTTTC+AGG + tig0001526:350112-350131 Msa1337680:CDS 50.0%
TCGGAATCGATGGTTTCAGG+GGG + tig0001526:350115-350134 Msa1337680:CDS 50.0%
! GGGGGTGTGAATAGTAACCA+AGG + tig0001526:350133-350152 Msa1337680:CDS 50.0%
TGGAATGGATCGTGAAGCGA+GGG + tig0001526:350183-350202 Msa1337680:CDS 50.0%
ATCGTGAAGCGAGGGTTATG+AGG + tig0001526:350191-350210 Msa1337680:CDS 50.0%
ACCGGCCTTTAATTCTAGGC+CGG - tig0001526:350291-350310 None:intergenic 50.0%
GCGAACCGGCCTTTAATTCT+AGG - tig0001526:350295-350314 None:intergenic 50.0%
GCATGGTGAAAAAGCTTGGC+TGG + tig0001526:350786-350805 Msa1337680:three_prime_UTR 50.0%
CACCCCATCCAATAGGAATG+GGG - tig0001526:351037-351056 None:intergenic 50.0%
GCACCCCATCCAATAGGAAT+GGG - tig0001526:351038-351057 None:intergenic 50.0%
GAGTCAAAGAAAGGCTCGAC+GGG - tig0001526:349532-349551 None:intergenic 50.0%
GGAGTCAAAGAAAGGCTCGA+CGG - tig0001526:349533-349552 None:intergenic 50.0%
! GGATTTGACGACGGATTCAG+CGG - tig0001526:349554-349573 None:intergenic 50.0%
GTTCCTACTGACGACGGTTA+CGG + tig0001526:349616-349635 Msa1337680:CDS 50.0%
! AGTGGTGCCAGATGCAAACA+CGG + tig0001526:350066-350085 Msa1337680:CDS 50.0%
TCTGACACCGTGTTTGCATC+TGG - tig0001526:350076-350095 None:intergenic 50.0%
GGATCGGAATCGATGGTTTC+AGG + tig0001526:350112-350131 Msa1337680:CDS 50.0%
TCGGAATCGATGGTTTCAGG+GGG + tig0001526:350115-350134 Msa1337680:CDS 50.0%
! GGGGGTGTGAATAGTAACCA+AGG + tig0001526:350133-350152 Msa1337680:CDS 50.0%
TGGAATGGATCGTGAAGCGA+GGG + tig0001526:350183-350202 Msa1337680:CDS 50.0%
ATCGTGAAGCGAGGGTTATG+AGG + tig0001526:350191-350210 Msa1337680:CDS 50.0%
ACCGGCCTTTAATTCTAGGC+CGG - tig0001526:350291-350310 None:intergenic 50.0%
GCGAACCGGCCTTTAATTCT+AGG - tig0001526:350295-350314 None:intergenic 50.0%
GCATGGTGAAAAAGCTTGGC+TGG + tig0001526:350786-350805 Msa1337680:three_prime_UTR 50.0%
CACCCCATCCAATAGGAATG+GGG - tig0001526:351037-351056 None:intergenic 50.0%
GCACCCCATCCAATAGGAAT+GGG - tig0001526:351038-351057 None:intergenic 50.0%
! AGAACGGCAAAAAAGCGCGG+CGG - tig0001526:349302-349321 None:intergenic 55.0%
TGCGTCAGCTTTGCACGTGA+CGG - tig0001526:349437-349456 None:intergenic 55.0%
!! TGGATTGGCGGAGTGGATGT+CGG - tig0001526:349485-349504 None:intergenic 55.0%
TGACCGTAACCGTCGTCAGT+AGG - tig0001526:349622-349641 None:intergenic 55.0%
ATGATGCTGAAGCAGCTGCG+TGG + tig0001526:349644-349663 Msa1337680:CDS 55.0%
TTCATCATCCGCGCTGGAGT+AGG - tig0001526:349847-349866 None:intergenic 55.0%
AGTAACCAAGGGGTGGTGCA+AGG + tig0001526:350145-350164 Msa1337680:CDS 55.0%
GTGGAATGGATCGTGAAGCG+AGG + tig0001526:350182-350201 Msa1337680:CDS 55.0%
CCGGCCTTTAATTCTAGGCC+GGG - tig0001526:350290-350309 None:intergenic 55.0%
CCCGGCCTAGAATTAAAGGC+CGG + tig0001526:350287-350306 Msa1337680:CDS 55.0%
GAACTGCGAGAGGATCAGCA+GGG - tig0001526:350360-350379 None:intergenic 55.0%
AAAGTGGGAACGACGCCGTA+TGG - tig0001526:350406-350425 None:intergenic 55.0%
TTTGGCGCGGTTGTACGGTA+TGG + tig0001526:350750-350769 Msa1337680:three_prime_UTR 55.0%
TTGGCGCGGTTGTACGGTAT+GGG + tig0001526:350751-350770 Msa1337680:three_prime_UTR 55.0%
GGCACCCCATCCAATAGGAA+TGG - tig0001526:351039-351058 None:intergenic 55.0%
! AGAACGGCAAAAAAGCGCGG+CGG - tig0001526:349302-349321 None:intergenic 55.0%
TGCGTCAGCTTTGCACGTGA+CGG - tig0001526:349437-349456 None:intergenic 55.0%
!! TGGATTGGCGGAGTGGATGT+CGG - tig0001526:349485-349504 None:intergenic 55.0%
TGACCGTAACCGTCGTCAGT+AGG - tig0001526:349622-349641 None:intergenic 55.0%
ATGATGCTGAAGCAGCTGCG+TGG + tig0001526:349644-349663 Msa1337680:CDS 55.0%
TTCATCATCCGCGCTGGAGT+AGG - tig0001526:349847-349866 None:intergenic 55.0%
AGTAACCAAGGGGTGGTGCA+AGG + tig0001526:350145-350164 Msa1337680:CDS 55.0%
GTGGAATGGATCGTGAAGCG+AGG + tig0001526:350182-350201 Msa1337680:CDS 55.0%
CCGGCCTTTAATTCTAGGCC+GGG - tig0001526:350290-350309 None:intergenic 55.0%
CCCGGCCTAGAATTAAAGGC+CGG + tig0001526:350287-350306 Msa1337680:CDS 55.0%
GAACTGCGAGAGGATCAGCA+GGG - tig0001526:350360-350379 None:intergenic 55.0%
AAAGTGGGAACGACGCCGTA+TGG - tig0001526:350406-350425 None:intergenic 55.0%
TTTGGCGCGGTTGTACGGTA+TGG + tig0001526:350750-350769 Msa1337680:three_prime_UTR 55.0%
TTGGCGCGGTTGTACGGTAT+GGG + tig0001526:350751-350770 Msa1337680:three_prime_UTR 55.0%
GGCACCCCATCCAATAGGAA+TGG - tig0001526:351039-351058 None:intergenic 55.0%
! GAACGGCAAAAAAGCGCGGC+GGG - tig0001526:349301-349320 None:intergenic 60.0%
! GCTTTGCACGTGACGGAAGC+TGG - tig0001526:349430-349449 None:intergenic 60.0%
!! ACGACGAGCGAGTGGATTGG+CGG - tig0001526:349497-349516 None:intergenic 60.0%
GTGACGACGAGCGAGTGGAT+TGG - tig0001526:349500-349519 None:intergenic 60.0%
GGCGGTGGAGGATTTGACGA+CGG - tig0001526:349563-349582 None:intergenic 60.0%
TTGCTCCTTGCACCACCCCT+TGG - tig0001526:350153-350172 None:intergenic 60.0%
GGAACTGCGAGAGGATCAGC+AGG - tig0001526:350361-350380 None:intergenic 60.0%
TGGCGCGGTTGTACGGTATG+GGG + tig0001526:350752-350771 Msa1337680:three_prime_UTR 60.0%
ATGGGGGCAGAGCAAGAGCA+TGG + tig0001526:350769-350788 Msa1337680:three_prime_UTR 60.0%
GGAGTGGCACCCCATCCAAT+AGG - tig0001526:351044-351063 None:intergenic 60.0%
! GAACGGCAAAAAAGCGCGGC+GGG - tig0001526:349301-349320 None:intergenic 60.0%
! GCTTTGCACGTGACGGAAGC+TGG - tig0001526:349430-349449 None:intergenic 60.0%
!! ACGACGAGCGAGTGGATTGG+CGG - tig0001526:349497-349516 None:intergenic 60.0%
GTGACGACGAGCGAGTGGAT+TGG - tig0001526:349500-349519 None:intergenic 60.0%
GGCGGTGGAGGATTTGACGA+CGG - tig0001526:349563-349582 None:intergenic 60.0%
TTGCTCCTTGCACCACCCCT+TGG - tig0001526:350153-350172 None:intergenic 60.0%
GGAACTGCGAGAGGATCAGC+AGG - tig0001526:350361-350380 None:intergenic 60.0%
TGGCGCGGTTGTACGGTATG+GGG + tig0001526:350752-350771 Msa1337680:three_prime_UTR 60.0%
ATGGGGGCAGAGCAAGAGCA+TGG + tig0001526:350769-350788 Msa1337680:three_prime_UTR 60.0%
GGAGTGGCACCCCATCCAAT+AGG - tig0001526:351044-351063 None:intergenic 60.0%
ACATCCAGACGCGCTCGTGG+CGG - tig0001526:349387-349406 None:intergenic 65.0%
CACACATCCAGACGCGCTCG+TGG - tig0001526:349390-349409 None:intergenic 65.0%
!! GAGCGAGTGGATTGGCGGAG+TGG - tig0001526:349492-349511 None:intergenic 65.0%
CGTTCGTGACGACGAGCGAG+TGG - tig0001526:349505-349524 None:intergenic 65.0%
GGCGCGGTTGTACGGTATGG+GGG + tig0001526:350753-350772 Msa1337680:three_prime_UTR 65.0%
ACATCCAGACGCGCTCGTGG+CGG - tig0001526:349387-349406 None:intergenic 65.0%
CACACATCCAGACGCGCTCG+TGG - tig0001526:349390-349409 None:intergenic 65.0%
!! GAGCGAGTGGATTGGCGGAG+TGG - tig0001526:349492-349511 None:intergenic 65.0%
CGTTCGTGACGACGAGCGAG+TGG - tig0001526:349505-349524 None:intergenic 65.0%
GGCGCGGTTGTACGGTATGG+GGG + tig0001526:350753-350772 Msa1337680:three_prime_UTR 65.0%
CATCCAGACGCGCTCGTGGC+GGG - tig0001526:349386-349405 None:intergenic 70.0%
AGACGCGGCTGCTGCAGCAG+CGG - tig0001526:349584-349603 None:intergenic 70.0%
CATCCAGACGCGCTCGTGGC+GGG - tig0001526:349386-349405 None:intergenic 70.0%
AGACGCGGCTGCTGCAGCAG+CGG - tig0001526:349584-349603 None:intergenic 70.0%
CTTCCCGCCACGAGCGCGTC+TGG + tig0001526:349380-349399 Msa1337680:CDS 75.0%
TGCTGCAGCAGCGGCGGTGG+AGG - tig0001526:349575-349594 None:intergenic 75.0%
CTTCCCGCCACGAGCGCGTC+TGG + tig0001526:349380-349399 Msa1337680:CDS 75.0%
TGCTGCAGCAGCGGCGGTGG+AGG - tig0001526:349575-349594 None:intergenic 75.0%
! GGCTGCTGCAGCAGCGGCGG+TGG - tig0001526:349578-349597 None:intergenic 80.0%
! CGCGGCTGCTGCAGCAGCGG+CGG - tig0001526:349581-349600 None:intergenic 80.0%
! GGCTGCTGCAGCAGCGGCGG+TGG - tig0001526:349578-349597 None:intergenic 80.0%
! CGCGGCTGCTGCAGCAGCGG+CGG - tig0001526:349581-349600 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0001526 gene 349034 351144 349034 ID=Msa1337680;Name=Msa1337680
tig0001526 mRNA 349034 351144 349034 ID=Msa1337680-mRNA-1;Parent=Msa1337680;Name=Msa1337680-mRNA-1;_AED=0.00;_eAED=0.00;_QI=180|1|1|1|1|1|2|715|376
tig0001526 exon 349034 349954 349034 ID=Msa1337680-mRNA-1:exon:1253;Parent=Msa1337680-mRNA-1
tig0001526 exon 350040 351144 350040 ID=Msa1337680-mRNA-1:exon:1254;Parent=Msa1337680-mRNA-1
tig0001526 five_prime_UTR 349034 349213 349034 ID=Msa1337680-mRNA-1:five_prime_utr;Parent=Msa1337680-mRNA-1
tig0001526 CDS 349214 349954 349214 ID=Msa1337680-mRNA-1:cds;Parent=Msa1337680-mRNA-1
tig0001526 CDS 350040 350429 350040 ID=Msa1337680-mRNA-1:cds;Parent=Msa1337680-mRNA-1
tig0001526 three_prime_UTR 350430 351144 350430 ID=Msa1337680-mRNA-1:three_prime_utr;Parent=Msa1337680-mRNA-1
Gene Sequence

>Msa1337680

ATGGGTATTGAAAGAGGAGGACTAAAGAGTTTTCGAAGCGGCTGGAGTGTGCCACCTAAGCTATGTGATTCTTGCAAGCTTACTCCCGCCGCGCTTTTTTGCCGTTCTGATTCTGCGTTTCTATGCATCAACTGTGATTCCACCATTCACTCTGCTAACAAACTCTCTTCCCGCCACGAGCGCGTCTGGATGTGTGAAGTTTGTGAACAAGCACCAGCTTCCGTCACGTGCAAAGCTGACGCAGCTGCTCTATGCGTCACGTGCGATTCCGACATCCACTCCGCCAATCCACTCGCTCGTCGTCACGAACGTGTTCCCGTCGAGCCTTTCTTTGACTCCGCTGAATCCGTCGTCAAATCCTCCACCGCCGCTGCTGCAGCAGCCGCGTCTTCCAATTTCGTTGTTCCTACTGACGACGGTTACGGTCAAGATGATGCTGAAGCAGCTGCGTGGCTGATTCCGAATCCTAATTTCGGATCCAAACTCAATGAAACTCAAGATATCAAAACTAGAGAGATGTTCTTCTCTGATATGGATCCATTTCTTGATTTTGATTACTCAAACAATTTCCAGAACAACAATAACTGCAGCAACGCCATGAACGATAGCGTTGTTCCTGTTCAAACTAAACCTACTCCAGCGCGGATGATGAATCATAACTCAGAAGGTTGCTTTGACATTGATTTTTGCAGATCGAAGCTATCTTCCTTTAACTATCCATCACATTCCATTAGCCATAGCGTTTCGTCATCTTCACTTGACGTAGGAGTGGTGCCAGATGCAAACACGGTGTCAGAGATATCATACAATTTTGGATCGGAATCGATGGTTTCAGGGGGTGTGAATAGTAACCAAGGGGTGGTGCAAGGAGCAACACAATTATGTGGAATGGATCGTGAAGCGAGGGTTATGAGGTACAGAGAGAAGAGGAAGAACCGAAAATTCGAGAAGACTATTCGTTATGCTTCGCGAAAAGCTTATGCAGAAACCCGGCCTAGAATTAAAGGCCGGTTCGCTAAACGAACCGAAATTGACTCGGATGTGGACCGTCTCTATAACCCTGCTGATCCTCTCGCAGTTCCTTCATCTATGCTAATGGACTGTCCATACGGCGTCGTTCCCACTTTTTAG
Protein sequence

>Msa1337680

MGIERGGLKSFRSGWSVPPKLCDSCKLTPAALFCRSDSAFLCINCDSTIHSANKLSSRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESVVKSSTAAAAAAASSNFVVPTDDGYGQDDAEAAAWLIPNPNFGSKLNETQDIKTREMFFSDMDPFLDFDYSNNFQNNNNCSNAMNDSVVPVQTKPTPARMMNHNSEGCFDIDFCRSKLSSFNYPSHSISHSVSSSSLDVGVVPDANTVSEISYNFGSESMVSGGVNSNQGVVQGATQLCGMDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYNPADPLAVPSSMLMDCPYGVVPTF*