AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1265140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265140 MtrunA17_Chr4g0072871 96.817 377 10 2 1 377 1 375 0.0 749
Msa1265140 MtrunA17_Chr1g0150471 46.944 360 140 8 20 376 4 315 1.52e-99 298
Msa1265140 MtrunA17_Chr3g0136701 49.307 361 104 11 20 376 4 289 2.75e-89 271
Msa1265140 MtrunA17_Chr7g0220721 64.835 91 32 0 20 110 24 114 5.60e-39 143
Msa1265140 MtrunA17_Chr1g0155811 45.161 93 41 1 22 104 5 97 1.83e-20 90.1
Msa1265140 MtrunA17_Chr5g0429341 43.333 90 51 0 21 110 4 93 1.04e-18 87.0
Msa1265140 MtrunA17_Chr4g0033641 39.130 92 47 1 22 104 5 96 1.17e-16 78.6
Msa1265140 MtrunA17_Chr7g0268691 39.326 89 53 1 22 110 20 107 1.93e-16 80.1
Msa1265140 MtrunA17_Chr7g0268691 41.176 68 40 0 274 341 302 369 7.99e-11 63.2
Msa1265140 MtrunA17_Chr5g0405151 43.210 81 38 1 21 93 4 84 3.19e-16 76.3
Msa1265140 MtrunA17_Chr4g0035651 40.860 93 45 1 22 104 5 97 3.24e-16 77.0
Msa1265140 MtrunA17_Chr3g0145061 34.454 119 68 1 22 130 5 123 4.90e-16 76.6
Msa1265140 MtrunA17_Chr3g0120711 38.889 90 54 1 21 110 4 92 4.88e-15 76.3
Msa1265140 MtrunA17_Chr3g0120711 35.714 112 72 0 233 344 287 398 8.22e-11 63.2
Msa1265140 MtrunA17_Chr2g0329511 36.957 92 49 1 22 104 5 96 5.41e-15 73.9
Msa1265140 MtrunA17_Chr2g0314671 38.043 92 48 1 22 104 5 96 2.02e-14 73.2
Msa1265140 MtrunA17_Chr3g0142221 36.170 94 49 1 22 104 5 98 7.47e-14 70.5
Msa1265140 MtrunA17_Chr8g0390971 54.795 73 31 1 271 343 331 401 1.44e-13 71.6
Msa1265140 MtrunA17_Chr2g0322941 39.024 82 50 0 21 102 43 124 6.58e-13 67.8
Msa1265140 MtrunA17_Chr7g0251781 40.541 74 44 0 22 95 5 78 7.85e-12 66.2
Msa1265140 MtrunA17_Chr5g0431351 53.226 62 26 1 284 342 155 216 1.08e-11 63.9
Msa1265140 MtrunA17_Chr1g0209861 48.052 77 29 2 266 342 359 424 1.49e-11 65.5
Msa1265140 MtrunA17_Chr2g0327621 43.548 62 32 1 288 346 140 201 2.38e-11 63.5
Msa1265140 MtrunA17_Chr2g0322951 59.184 49 20 0 296 344 88 136 4.74e-11 60.5
Msa1265140 MtrunA17_Chr1g0209071 29.565 115 71 1 20 134 3 107 5.23e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1265140 AT5G57660.1 53.385 384 143 10 1 377 1 355 8.75e-118 346
Msa1265140 AT5G24930.1 48.593 391 136 13 20 377 4 362 1.96e-96 292
Msa1265140 AT2G24790.1 50.760 329 97 13 20 344 6 273 1.20e-91 277
Msa1265140 AT3G02380.1 39.892 371 173 13 20 377 14 347 1.76e-78 245
Msa1265140 AT5G15850.1 39.418 378 188 7 13 377 6 355 1.02e-76 241
Msa1265140 AT5G15840.1 38.032 376 209 12 13 377 11 373 6.97e-76 239
Msa1265140 AT2G24790.2 48.069 233 78 10 20 249 6 198 3.67e-56 183
Msa1265140 AT5G15840.2 34.211 228 140 6 13 230 11 238 2.17e-39 141
Msa1265140 AT3G21880.3 26.741 359 220 10 16 341 4 352 1.28e-23 101
Msa1265140 AT3G21880.2 26.741 359 220 10 16 341 4 352 1.28e-23 101
Msa1265140 AT3G21880.1 26.346 353 218 9 22 341 5 348 2.66e-23 100
Msa1265140 AT2G33500.2 44.944 89 49 0 22 110 12 100 4.07e-18 85.5
Msa1265140 AT2G33500.1 44.944 89 49 0 22 110 12 100 4.10e-18 85.5
Msa1265140 AT1G28050.1 43.820 89 50 0 22 110 9 97 3.62e-17 83.2
Msa1265140 AT1G49130.2 25.305 328 162 9 65 343 21 314 3.65e-17 82.0
Msa1265140 AT1G49130.1 25.305 328 162 9 65 343 28 321 3.68e-17 82.0
Msa1265140 AT2G21320.1 40.449 89 45 1 21 101 4 92 1.83e-16 77.0
Msa1265140 AT1G75540.1 34.884 129 71 2 22 137 5 133 1.83e-16 80.1
Msa1265140 AT4G38960.1 43.210 81 38 1 21 93 4 84 5.40e-16 75.9
Msa1265140 AT4G38960.6 43.210 81 38 1 21 93 4 84 5.40e-16 75.9
Msa1265140 AT2G47890.2 38.462 91 54 1 20 110 11 99 6.16e-16 77.0
Msa1265140 AT1G06040.1 40.217 92 46 1 22 104 5 96 6.28e-16 77.0
Msa1265140 AT2G47890.3 38.462 91 54 1 20 110 11 99 7.39e-16 77.8
Msa1265140 AT2G47890.1 38.462 91 54 1 20 110 11 99 8.44e-16 78.2
Msa1265140 AT1G06040.2 40.217 92 46 1 22 104 5 96 1.03e-15 75.1
Msa1265140 AT4G15250.1 31.613 155 98 3 22 176 5 151 1.17e-15 77.8
Msa1265140 AT5G48250.1 32.117 137 80 2 21 144 4 140 1.34e-15 77.8
Msa1265140 AT3G07650.3 45.205 73 40 0 21 93 4 76 3.74e-15 76.6
Msa1265140 AT3G07650.2 45.205 73 40 0 21 93 4 76 3.74e-15 76.6
Msa1265140 AT3G07650.4 45.205 73 40 0 21 93 4 76 3.74e-15 76.6
Msa1265140 AT3G07650.1 45.205 73 40 0 21 93 4 76 3.74e-15 76.6
Msa1265140 AT2G31380.1 36.036 111 57 2 22 123 5 110 6.29e-15 73.9
Msa1265140 AT1G78600.1 38.043 92 48 1 22 104 5 96 1.98e-14 73.6
Msa1265140 AT1G78600.2 35.238 105 59 1 22 117 5 109 2.30e-14 73.6
Msa1265140 AT1G73870.1 52.000 75 31 2 273 345 319 390 1.39e-13 72.0
Msa1265140 AT1G68190.2 36.585 82 52 0 20 101 41 122 2.93e-12 67.8
Msa1265140 AT1G68190.1 36.585 82 52 0 20 101 12 93 3.13e-12 67.8
Msa1265140 AT1G68190.3 36.585 82 52 0 20 101 12 93 3.13e-12 67.8
Msa1265140 AT4G10240.1 28.082 146 84 3 22 150 5 146 5.42e-12 63.9
Msa1265140 AT4G39070.1 36.559 93 49 1 22 104 5 97 1.09e-11 64.7
Msa1265140 AT1G68520.1 67.391 46 15 0 300 345 357 402 1.67e-11 65.9
Msa1265140 AT1G25440.1 69.767 43 13 0 300 342 361 403 5.82e-11 63.9

Find 128 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATCGGAATCGATGGTTTC+AGG 0.197771 8_2:-69230147 Msa1265140:CDS
GCGAACCGGCCTTTAATTCT+AGG 0.209256 8_2:+69229967 None:intergenic
TCAGAGATATCATACAATTT+TGG 0.229801 8_2:-69230168 Msa1265140:CDS
GGTGAGTTTGATGATTTCTT+AGG 0.235558 8_2:+69231189 None:intergenic
TTGAGTTTGGATCCGAAATT+AGG 0.238048 8_2:+69230584 None:intergenic
AGTGGTGAATTTGTTAGATT+TGG 0.277983 8_2:-69229533 Msa1265140:three_prime_UTR
TGCTGCAGTTATTATTGTTC+TGG 0.279819 8_2:+69230480 None:intergenic
ATCTTGAGTTTCATTGAGTT+TGG 0.285458 8_2:+69230571 None:intergenic
TTAAAGAAAGGAGAACTTTA+CGG 0.307730 8_2:-69229402 Msa1265140:three_prime_UTR
GTCCACATCCGAGTCAATTT+CGG 0.307960 8_2:+69229936 None:intergenic
GGAGAACTTTACGGGACTTT+TGG 0.316406 8_2:-69229393 Msa1265140:three_prime_UTR
GGAATGTGATGGATAGTTAA+AGG 0.317309 8_2:+69230343 None:intergenic
ATTACTTACGCTATGGCTAA+TGG 0.327776 8_2:+69230322 None:intergenic
AGAGATGTTCTTCTCTGATA+TGG 0.330404 8_2:-69230537 Msa1265140:CDS
GAAACCCGGCCTAGAATTAA+AGG 0.334745 8_2:-69229976 Msa1265140:CDS
TTTGGTTGATAGTATTAATC+TGG 0.339570 8_2:-69229375 Msa1265140:three_prime_UTR
CTTCCCGCCACGAGCGCGTC+TGG 0.340581 8_2:-69230886 Msa1265140:CDS
ATCTGTATCCCTATTCCTAT+TGG 0.348827 8_2:-69229239 Msa1265140:three_prime_UTR
TGCAGCAGCAGCGGCGGTGG+AGG 0.355099 8_2:+69230694 None:intergenic
CGCTTCTTAGCTTATTTGAA+TGG 0.369817 8_2:+69231134 None:intergenic
TAAAGAAAGGAGAACTTTAC+GGG 0.370392 8_2:-69229401 Msa1265140:three_prime_UTR
CTGATTCCGAATCCTAATTT+CGG 0.371287 8_2:-69230596 Msa1265140:CDS
TTGGCGCGGTTGTACGGTAT+GGG 0.377403 8_2:-69229514 Msa1265140:three_prime_UTR
GCACCCCATCCAATAGGAAT+AGG 0.380955 8_2:+69229230 None:intergenic
TGCTGCAGCAGCAGCGGCGG+TGG 0.393698 8_2:+69230691 None:intergenic
ACTTGAATTGAAGATTTGTC+TGG 0.402334 8_2:-69229456 Msa1265140:three_prime_UTR
TTTCGGTTCGTTTAGCGAAC+CGG 0.407227 8_2:+69229953 None:intergenic
GGAGTAGGTTTAGTTTGAAC+AGG 0.409524 8_2:+69230434 None:intergenic
GAGTTTGTTAGCAGAGTGAA+TGG 0.415127 8_2:+69230910 None:intergenic
AGGAACAACGCTATCGTTCA+TGG 0.416132 8_2:+69230454 None:intergenic
CGCGGCTGCTGCAGCAGCAG+CGG 0.424961 8_2:+69230685 None:intergenic
GTTCCTACTGACGACGGTTA+CGG 0.428387 8_2:-69230647 Msa1265140:CDS
GATCGGAATCGATGGTTTCA+GGG 0.428883 8_2:-69230146 Msa1265140:CDS
AGTTCCTTCATCTATGCTAA+TGG 0.433285 8_2:-69229884 Msa1265140:CDS
TCAGTCGATTTCTTACCAAC+TGG 0.434072 8_2:-69229611 Msa1265140:three_prime_UTR
TCTGACACCGTGTTTGCATC+TGG 0.435148 8_2:+69230186 None:intergenic
TTTGGCGCGGTTGTACGGTA+TGG 0.437776 8_2:-69229515 Msa1265140:three_prime_UTR
GTATCCCTATTCCTATTGGA+TGG 0.446425 8_2:-69229235 Msa1265140:three_prime_UTR
TTAGATTTGGCGCGGTTGTA+CGG 0.448042 8_2:-69229520 Msa1265140:three_prime_UTR
TTGCTCCTTGCACCACCCCT+TGG 0.448969 8_2:+69230109 None:intergenic
GAGTAATCAAAATCAAGAAA+TGG 0.454052 8_2:+69230512 None:intergenic
TTGGATCCGAAATTAGGATT+CGG 0.457793 8_2:+69230590 None:intergenic
TATCCCTATTCCTATTGGAT+GGG 0.460275 8_2:-69229234 Msa1265140:three_prime_UTR
GTGAGTTTGATGATTTCTTA+GGG 0.461552 8_2:+69231190 None:intergenic
TGTCTCTGATCTTGATCTGA+GGG 0.465071 8_2:+69229676 None:intergenic
GGCTGCTGCAGCAGCAGCGG+CGG 0.467269 8_2:+69230688 None:intergenic
TGGCGCGGTTGTACGGTATG+GGG 0.469487 8_2:-69229513 Msa1265140:three_prime_UTR
TAGCATAACATAACATAAGA+TGG 0.472064 8_2:-69231071 Msa1265140:exon
GCTTTGCACGTGACGGAAGC+TGG 0.472622 8_2:+69230839 None:intergenic
AAAGTGGGAACGACGCCGTA+TGG 0.475583 8_2:+69229856 None:intergenic
GGAGTGGCACCCCATCCAAT+AGG 0.476032 8_2:+69229224 None:intergenic
GCTTCTTAGCTTATTTGAAT+GGG 0.479060 8_2:+69231135 None:intergenic
AACCGAAATTGACTCGGATG+TGG 0.481901 8_2:-69229938 Msa1265140:CDS
CCGGCCTTTAATTCTAGGCC+GGG 0.498099 8_2:+69229972 None:intergenic
ACCGGCCTTTAATTCTAGGC+CGG 0.502804 8_2:+69229971 None:intergenic
GGAACTGCGAGAGGATCAGC+AGG 0.506955 8_2:+69229901 None:intergenic
TGTTTGAATGAATTTGAGTT+GGG 0.508113 8_2:+69231168 None:intergenic
TTGTCTCTGATCTTGATCTG+AGG 0.511866 8_2:+69229675 None:intergenic
AGCAACACAATTATGTGGAA+TGG 0.513777 8_2:-69230091 Msa1265140:CDS
ATTATTGTTAGGATGAAAAG+TGG 0.515233 8_2:-69229551 Msa1265140:three_prime_UTR
AACACATTGAACCATGGTAT+AGG 0.516553 8_2:+69229794 None:intergenic
GAGTCAAAGAAAGGCTCGAC+GGG 0.517190 8_2:+69230737 None:intergenic
TTGCAAGAATCACATAGCTT+AGG 0.521043 8_2:+69230998 None:intergenic
TACAGATACAGCTTGAGAAA+AGG 0.522004 8_2:+69229203 None:intergenic
CATAAGATGGGTATTGAAAG+AGG 0.525020 8_2:-69231058 Msa1265140:exon
CACCCCATCCAATAGGAATA+GGG 0.525243 8_2:+69229231 None:intergenic
ATTAAAACAGTTGATCCAGT+TGG 0.525383 8_2:+69229596 None:intergenic
TTGTTTGAATGAATTTGAGT+TGG 0.539673 8_2:+69231167 None:intergenic
ATGCTAATGGACTGTCCATA+CGG 0.541142 8_2:-69229871 Msa1265140:CDS
ATCCCTATTCCTATTGGATG+GGG 0.543179 8_2:-69229233 Msa1265140:three_prime_UTR
TTTGATGATTTCTTAGGGTG+CGG 0.546755 8_2:+69231195 None:intergenic
GAGCGAGTGGATTGGCGGAG+TGG 0.557021 8_2:+69230777 None:intergenic
TTTCTAATGGGATCAGATCA+CGG 0.558451 8_2:-69229268 Msa1265140:three_prime_UTR
TGCGTCAGCTTTGCACGTGA+CGG 0.560515 8_2:+69230832 None:intergenic
TTATGAGGTACAGAGAGAAG+AGG 0.563746 8_2:-69230053 Msa1265140:CDS
TTACACATCGCGCACTAATG+AGG 0.564234 8_2:-69229640 Msa1265140:three_prime_UTR
TGGATTGGCGGAGTGGATGT+CGG 0.572687 8_2:+69230784 None:intergenic
AGTAACCAAGGGGTGGTGCA+AGG 0.573333 8_2:-69230114 Msa1265140:CDS
ATCGGAATCGATGGTTTCAG+GGG 0.573412 8_2:-69230145 Msa1265140:CDS
AGCATAACATAACATAAGAT+GGG 0.574108 8_2:-69231070 Msa1265140:exon
TTTGTTAGCAGAGTGAATGG+TGG 0.574357 8_2:+69230913 None:intergenic
CAAGAATCACATAGCTTAGG+TGG 0.574456 8_2:+69231001 None:intergenic
GATTAGTGATGATGATTCTG+TGG 0.575368 8_2:-69229757 Msa1265140:three_prime_UTR
GATTCAGCGGAGTCAAAGAA+AGG 0.575805 8_2:+69230728 None:intergenic
GTGACGACGAGCGAGTGGAT+TGG 0.575999 8_2:+69230769 None:intergenic
TTATGATTCATCATCCGCGC+TGG 0.581963 8_2:+69230413 None:intergenic
CAGTCCATTAGCATAGATGA+AGG 0.582055 8_2:+69229880 None:intergenic
TCTTAGCTTATTTGAATGGG+AGG 0.591279 8_2:+69231138 None:intergenic
TGGAATGGATCGTGAAGCGA+GGG 0.592479 8_2:-69230076 Msa1265140:CDS
ACGACGAGCGAGTGGATTGG+CGG 0.592706 8_2:+69230772 None:intergenic
CAAGGAGCAACACAATTATG+TGG 0.592806 8_2:-69230096 Msa1265140:CDS
TGTATGTATAGTCAAGTGAC+TGG 0.593195 8_2:+69231229 None:intergenic
ATGATGAATCATAACTCAGA+AGG 0.596503 8_2:-69230404 Msa1265140:CDS
GATCAGCAGGGTTATAGAGA+CGG 0.597767 8_2:+69229914 None:intergenic
CGTTCGTGACGACGAGCGAG+TGG 0.599256 8_2:+69230764 None:intergenic
ATCGTGAAGCGAGGGTTATG+AGG 0.603818 8_2:-69230068 Msa1265140:CDS
TTCATCATCCGCGCTGGAGT+AGG 0.609886 8_2:+69230419 None:intergenic
CCCGGCCTAGAATTAAAGGC+CGG 0.612766 8_2:-69229972 Msa1265140:CDS
CTATGGCTAATGGAATGTGA+TGG 0.620066 8_2:+69230332 None:intergenic
ATAAGCGATTTCATTAGTAG+TGG 0.621437 8_2:-69231094 Msa1265140:five_prime_UTR
ATCTTCACTTGACGTAGGAG+TGG 0.622983 8_2:-69230211 Msa1265140:CDS
TATTCTAACACATTGAACCA+TGG 0.625616 8_2:+69229788 None:intergenic
TCGTCATCTTCACTTGACGT+AGG 0.628545 8_2:-69230216 Msa1265140:CDS
GGGGTGTGAATAGTAACCAA+GGG 0.630822 8_2:-69230125 Msa1265140:CDS
GGATTTGACGACGGATTCAG+CGG 0.633353 8_2:+69230715 None:intergenic
GAAAAGCTTATGCAGAAACC+CGG 0.633617 8_2:-69229990 Msa1265140:CDS
GTGGAATGGATCGTGAAGCG+AGG 0.634097 8_2:-69230077 Msa1265140:CDS
GGAGTCAAAGAAAGGCTCGA+CGG 0.644574 8_2:+69230736 None:intergenic
CACACATCCAGACGCGCTCG+TGG 0.646583 8_2:+69230879 None:intergenic
AGTGGTGCCAGATGCAAACA+CGG 0.653433 8_2:-69230193 Msa1265140:CDS
ATAGATGAAGGAACTGCGAG+AGG 0.656412 8_2:+69229892 None:intergenic
TAAACGAACCGAAATTGACT+CGG 0.658214 8_2:-69229944 Msa1265140:CDS
TTCGTTGTTCCTACTGACGA+CGG 0.659626 8_2:-69230653 Msa1265140:CDS
ATTAGTGATGATGATTCTGT+GGG 0.668921 8_2:-69229756 Msa1265140:three_prime_UTR
ATAGAAACGCAGAATCAGAA+CGG 0.671868 8_2:+69230951 None:intergenic
GGCGGTGGAGGATTTGACGA+CGG 0.677124 8_2:+69230706 None:intergenic
AGTATGAATCTCCTATACCA+TGG 0.679029 8_2:-69229805 Msa1265140:three_prime_UTR
TGAATTTGTTAGATTTGGCG+CGG 0.681844 8_2:-69229528 Msa1265140:three_prime_UTR
AAACAAGGTCAGGATAACAG+AGG 0.687745 8_2:-69229828 Msa1265140:three_prime_UTR
ATACAGCTTGAGAAAAGGAG+TGG 0.688833 8_2:+69229208 None:intergenic
TGTGAATAGTAACCAAGGGG+TGG 0.689533 8_2:-69230121 Msa1265140:CDS
TCGGAATCGATGGTTTCAGG+GGG 0.701775 8_2:-69230144 Msa1265140:CDS
ATGATGCTGAAGCAGCTGCG+TGG 0.709512 8_2:-69230619 Msa1265140:CDS
AACAACGAAATTGAAAGACG+CGG 0.720436 8_2:+69230667 None:intergenic
GGGTGTGAATAGTAACCAAG+GGG 0.734808 8_2:-69230124 Msa1265140:CDS
AAGATGGGTATTGAAAGAGG+AGG 0.750089 8_2:-69231055 Msa1265140:CDS
AAACTAAACCTACTCCAGCG+CGG 0.776053 8_2:-69230427 Msa1265140:CDS
GAACTGCGAGAGGATCAGCA+GGG 0.795439 8_2:+69229902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAACAAAATAATCAAA+CGG + chr8_2:69230647-69230666 None:intergenic 10.0%
!! ATAAAAACAAAATAATCAAA+CGG + chr8_2:69230647-69230666 None:intergenic 10.0%
!! TTAATTAATTACTTACGCTA+TGG + chr8_2:69230063-69230082 None:intergenic 20.0%
!! TAACAAGCAAAAGTAAAAAA+CGG + chr8_2:69230956-69230975 None:intergenic 20.0%
!! TTAATTAATTACTTACGCTA+TGG + chr8_2:69230063-69230082 None:intergenic 20.0%
!! TAACAAGCAAAAGTAAAAAA+CGG + chr8_2:69230956-69230975 None:intergenic 20.0%
!! TGTTTGAATGAATTTGAGTT+GGG + chr8_2:69229210-69229229 None:intergenic 25.0%
! TTGTTTGAATGAATTTGAGT+TGG + chr8_2:69229211-69229230 None:intergenic 25.0%
! TAGCATAACATAACATAAGA+TGG - chr8_2:69229304-69229323 Msa1265140:three_prime_UTR 25.0%
! AGCATAACATAACATAAGAT+GGG - chr8_2:69229305-69229324 Msa1265140:three_prime_UTR 25.0%
! GAGTAATCAAAATCAAGAAA+TGG + chr8_2:69229866-69229885 None:intergenic 25.0%
!! TCAGAGATATCATACAATTT+TGG - chr8_2:69230207-69230226 Msa1265140:CDS 25.0%
!! GATATCATACAATTTTGGAT+CGG - chr8_2:69230212-69230231 Msa1265140:CDS 25.0%
! ATTATTGTTAGGATGAAAAG+TGG - chr8_2:69230824-69230843 Msa1265140:CDS 25.0%
! AACAAGCAAAAGTAAAAAAC+GGG + chr8_2:69230955-69230974 None:intergenic 25.0%
!!! TACTTTTGCTTGTTAAAGAA+AGG - chr8_2:69230961-69230980 Msa1265140:CDS 25.0%
! TTAAAGAAAGGAGAACTTTA+CGG - chr8_2:69230973-69230992 Msa1265140:CDS 25.0%
!!! TTTGGTTGATAGTATTAATC+TGG - chr8_2:69231000-69231019 Msa1265140:CDS 25.0%
!!! AGAAAAGTGTCTTTTTCTAA+TGG - chr8_2:69231094-69231113 Msa1265140:five_prime_UTR 25.0%
!!! GAAAAGTGTCTTTTTCTAAT+GGG - chr8_2:69231095-69231114 Msa1265140:five_prime_UTR 25.0%
! CTTCAGAAAAAAGAAAAACA+CGG + chr8_2:69231199-69231218 None:intergenic 25.0%
!! TGTTTGAATGAATTTGAGTT+GGG + chr8_2:69229210-69229229 None:intergenic 25.0%
! TTGTTTGAATGAATTTGAGT+TGG + chr8_2:69229211-69229230 None:intergenic 25.0%
! TAGCATAACATAACATAAGA+TGG - chr8_2:69229304-69229323 Msa1265140:three_prime_UTR 25.0%
! AGCATAACATAACATAAGAT+GGG - chr8_2:69229305-69229324 Msa1265140:three_prime_UTR 25.0%
! GAGTAATCAAAATCAAGAAA+TGG + chr8_2:69229866-69229885 None:intergenic 25.0%
!! TCAGAGATATCATACAATTT+TGG - chr8_2:69230207-69230226 Msa1265140:CDS 25.0%
!! GATATCATACAATTTTGGAT+CGG - chr8_2:69230212-69230231 Msa1265140:CDS 25.0%
! ATTATTGTTAGGATGAAAAG+TGG - chr8_2:69230824-69230843 Msa1265140:CDS 25.0%
! AACAAGCAAAAGTAAAAAAC+GGG + chr8_2:69230955-69230974 None:intergenic 25.0%
!!! TACTTTTGCTTGTTAAAGAA+AGG - chr8_2:69230961-69230980 Msa1265140:CDS 25.0%
! TTAAAGAAAGGAGAACTTTA+CGG - chr8_2:69230973-69230992 Msa1265140:CDS 25.0%
!!! TTTGGTTGATAGTATTAATC+TGG - chr8_2:69231000-69231019 Msa1265140:CDS 25.0%
!!! AGAAAAGTGTCTTTTTCTAA+TGG - chr8_2:69231094-69231113 Msa1265140:five_prime_UTR 25.0%
!!! GAAAAGTGTCTTTTTCTAAT+GGG - chr8_2:69231095-69231114 Msa1265140:five_prime_UTR 25.0%
! CTTCAGAAAAAAGAAAAACA+CGG + chr8_2:69231199-69231218 None:intergenic 25.0%
! GTGAGTTTGATGATTTCTTA+GGG + chr8_2:69229188-69229207 None:intergenic 30.0%
GCTTCTTAGCTTATTTGAAT+GGG + chr8_2:69229243-69229262 None:intergenic 30.0%
ATAAGCGATTTCATTAGTAG+TGG - chr8_2:69229281-69229300 Msa1265140:three_prime_UTR 30.0%
ATCTTGAGTTTCATTGAGTT+TGG + chr8_2:69229807-69229826 None:intergenic 30.0%
ATGATGAATCATAACTCAGA+AGG - chr8_2:69229971-69229990 Msa1265140:CDS 30.0%
!! TGATTTGGTTTGTTATTAGC+AGG - chr8_2:69230134-69230153 Msa1265140:CDS 30.0%
! GAATAGTCTTCTCGAATTTT+CGG + chr8_2:69230353-69230372 None:intergenic 30.0%
!!! TTCCCACTTTTTAGTAAACA+AGG - chr8_2:69230532-69230551 Msa1265140:CDS 30.0%
! GACCTTGTTTACTAAAAAGT+GGG + chr8_2:69230537-69230556 None:intergenic 30.0%
! TGACCTTGTTTACTAAAAAG+TGG + chr8_2:69230538-69230557 None:intergenic 30.0%
!! ACTTTTTAGTAAACAAGGTC+AGG - chr8_2:69230537-69230556 Msa1265140:CDS 30.0%
TATTCTAACACATTGAACCA+TGG + chr8_2:69230590-69230609 None:intergenic 30.0%
! ATTAGTGATGATGATTCTGT+GGG - chr8_2:69230619-69230638 Msa1265140:CDS 30.0%
ATTAAAACAGTTGATCCAGT+TGG + chr8_2:69230782-69230801 None:intergenic 30.0%
!! AGTGGTGAATTTGTTAGATT+TGG - chr8_2:69230842-69230861 Msa1265140:CDS 30.0%
ACTTGAATTGAAGATTTGTC+TGG - chr8_2:69230919-69230938 Msa1265140:CDS 30.0%
TAAAGAAAGGAGAACTTTAC+GGG - chr8_2:69230974-69230993 Msa1265140:CDS 30.0%
! GTGAGTTTGATGATTTCTTA+GGG + chr8_2:69229188-69229207 None:intergenic 30.0%
GCTTCTTAGCTTATTTGAAT+GGG + chr8_2:69229243-69229262 None:intergenic 30.0%
ATAAGCGATTTCATTAGTAG+TGG - chr8_2:69229281-69229300 Msa1265140:three_prime_UTR 30.0%
ATCTTGAGTTTCATTGAGTT+TGG + chr8_2:69229807-69229826 None:intergenic 30.0%
ATGATGAATCATAACTCAGA+AGG - chr8_2:69229971-69229990 Msa1265140:CDS 30.0%
!! TGATTTGGTTTGTTATTAGC+AGG - chr8_2:69230134-69230153 Msa1265140:CDS 30.0%
! GAATAGTCTTCTCGAATTTT+CGG + chr8_2:69230353-69230372 None:intergenic 30.0%
!!! TTCCCACTTTTTAGTAAACA+AGG - chr8_2:69230532-69230551 Msa1265140:CDS 30.0%
! GACCTTGTTTACTAAAAAGT+GGG + chr8_2:69230537-69230556 None:intergenic 30.0%
! TGACCTTGTTTACTAAAAAG+TGG + chr8_2:69230538-69230557 None:intergenic 30.0%
!! ACTTTTTAGTAAACAAGGTC+AGG - chr8_2:69230537-69230556 Msa1265140:CDS 30.0%
TATTCTAACACATTGAACCA+TGG + chr8_2:69230590-69230609 None:intergenic 30.0%
! ATTAGTGATGATGATTCTGT+GGG - chr8_2:69230619-69230638 Msa1265140:CDS 30.0%
ATTAAAACAGTTGATCCAGT+TGG + chr8_2:69230782-69230801 None:intergenic 30.0%
!! AGTGGTGAATTTGTTAGATT+TGG - chr8_2:69230842-69230861 Msa1265140:CDS 30.0%
ACTTGAATTGAAGATTTGTC+TGG - chr8_2:69230919-69230938 Msa1265140:CDS 30.0%
TAAAGAAAGGAGAACTTTAC+GGG - chr8_2:69230974-69230993 Msa1265140:CDS 30.0%
TGTATGTATAGTCAAGTGAC+TGG + chr8_2:69229149-69229168 None:intergenic 35.0%
! TTTGATGATTTCTTAGGGTG+CGG + chr8_2:69229183-69229202 None:intergenic 35.0%
! GGTGAGTTTGATGATTTCTT+AGG + chr8_2:69229189-69229208 None:intergenic 35.0%
TCTTAGCTTATTTGAATGGG+AGG + chr8_2:69229240-69229259 None:intergenic 35.0%
CGCTTCTTAGCTTATTTGAA+TGG + chr8_2:69229244-69229263 None:intergenic 35.0%
!! CATAAGATGGGTATTGAAAG+AGG - chr8_2:69229317-69229336 Msa1265140:three_prime_UTR 35.0%
TTGCAAGAATCACATAGCTT+AGG + chr8_2:69229380-69229399 None:intergenic 35.0%
ATAGAAACGCAGAATCAGAA+CGG + chr8_2:69229427-69229446 None:intergenic 35.0%
AACAACGAAATTGAAAGACG+CGG + chr8_2:69229711-69229730 None:intergenic 35.0%
CTGATTCCGAATCCTAATTT+CGG - chr8_2:69229779-69229798 Msa1265140:three_prime_UTR 35.0%
TTGGATCCGAAATTAGGATT+CGG + chr8_2:69229788-69229807 None:intergenic 35.0%
TTGAGTTTGGATCCGAAATT+AGG + chr8_2:69229794-69229813 None:intergenic 35.0%
AGAGATGTTCTTCTCTGATA+TGG - chr8_2:69229838-69229857 Msa1265140:exon 35.0%
TGCTGCAGTTATTATTGTTC+TGG + chr8_2:69229898-69229917 None:intergenic 35.0%
!! GGAATGTGATGGATAGTTAA+AGG + chr8_2:69230035-69230054 None:intergenic 35.0%
ATTACTTACGCTATGGCTAA+TGG + chr8_2:69230056-69230075 None:intergenic 35.0%
AGCAACACAATTATGTGGAA+TGG - chr8_2:69230284-69230303 Msa1265140:intron 35.0%
TAAACGAACCGAAATTGACT+CGG - chr8_2:69230431-69230450 Msa1265140:CDS 35.0%
AGTTCCTTCATCTATGCTAA+TGG - chr8_2:69230491-69230510 Msa1265140:CDS 35.0%
AGTATGAATCTCCTATACCA+TGG - chr8_2:69230570-69230589 Msa1265140:CDS 35.0%
AACACATTGAACCATGGTAT+AGG + chr8_2:69230584-69230603 None:intergenic 35.0%
! GATTAGTGATGATGATTCTG+TGG - chr8_2:69230618-69230637 Msa1265140:CDS 35.0%
!! TGAATTTGTTAGATTTGGCG+CGG - chr8_2:69230847-69230866 Msa1265140:CDS 35.0%
TTTCTAATGGGATCAGATCA+CGG - chr8_2:69231107-69231126 Msa1265140:five_prime_UTR 35.0%
ATCTGTATCCCTATTCCTAT+TGG - chr8_2:69231136-69231155 Msa1265140:five_prime_UTR 35.0%
TATCCCTATTCCTATTGGAT+GGG - chr8_2:69231141-69231160 Msa1265140:five_prime_UTR 35.0%
TACAGATACAGCTTGAGAAA+AGG + chr8_2:69231175-69231194 None:intergenic 35.0%
TGTATGTATAGTCAAGTGAC+TGG + chr8_2:69229149-69229168 None:intergenic 35.0%
! TTTGATGATTTCTTAGGGTG+CGG + chr8_2:69229183-69229202 None:intergenic 35.0%
! GGTGAGTTTGATGATTTCTT+AGG + chr8_2:69229189-69229208 None:intergenic 35.0%
TCTTAGCTTATTTGAATGGG+AGG + chr8_2:69229240-69229259 None:intergenic 35.0%
CGCTTCTTAGCTTATTTGAA+TGG + chr8_2:69229244-69229263 None:intergenic 35.0%
!! CATAAGATGGGTATTGAAAG+AGG - chr8_2:69229317-69229336 Msa1265140:three_prime_UTR 35.0%
TTGCAAGAATCACATAGCTT+AGG + chr8_2:69229380-69229399 None:intergenic 35.0%
ATAGAAACGCAGAATCAGAA+CGG + chr8_2:69229427-69229446 None:intergenic 35.0%
AACAACGAAATTGAAAGACG+CGG + chr8_2:69229711-69229730 None:intergenic 35.0%
CTGATTCCGAATCCTAATTT+CGG - chr8_2:69229779-69229798 Msa1265140:three_prime_UTR 35.0%
TTGGATCCGAAATTAGGATT+CGG + chr8_2:69229788-69229807 None:intergenic 35.0%
TTGAGTTTGGATCCGAAATT+AGG + chr8_2:69229794-69229813 None:intergenic 35.0%
AGAGATGTTCTTCTCTGATA+TGG - chr8_2:69229838-69229857 Msa1265140:exon 35.0%
TGCTGCAGTTATTATTGTTC+TGG + chr8_2:69229898-69229917 None:intergenic 35.0%
!! GGAATGTGATGGATAGTTAA+AGG + chr8_2:69230035-69230054 None:intergenic 35.0%
ATTACTTACGCTATGGCTAA+TGG + chr8_2:69230056-69230075 None:intergenic 35.0%
AGCAACACAATTATGTGGAA+TGG - chr8_2:69230284-69230303 Msa1265140:intron 35.0%
TAAACGAACCGAAATTGACT+CGG - chr8_2:69230431-69230450 Msa1265140:CDS 35.0%
AGTTCCTTCATCTATGCTAA+TGG - chr8_2:69230491-69230510 Msa1265140:CDS 35.0%
AGTATGAATCTCCTATACCA+TGG - chr8_2:69230570-69230589 Msa1265140:CDS 35.0%
AACACATTGAACCATGGTAT+AGG + chr8_2:69230584-69230603 None:intergenic 35.0%
! GATTAGTGATGATGATTCTG+TGG - chr8_2:69230618-69230637 Msa1265140:CDS 35.0%
!! TGAATTTGTTAGATTTGGCG+CGG - chr8_2:69230847-69230866 Msa1265140:CDS 35.0%
TTTCTAATGGGATCAGATCA+CGG - chr8_2:69231107-69231126 Msa1265140:five_prime_UTR 35.0%
ATCTGTATCCCTATTCCTAT+TGG - chr8_2:69231136-69231155 Msa1265140:five_prime_UTR 35.0%
TATCCCTATTCCTATTGGAT+GGG - chr8_2:69231141-69231160 Msa1265140:five_prime_UTR 35.0%
TACAGATACAGCTTGAGAAA+AGG + chr8_2:69231175-69231194 None:intergenic 35.0%
!! AAGATGGGTATTGAAAGAGG+AGG - chr8_2:69229320-69229339 Msa1265140:three_prime_UTR 40.0%
! GGACTAAAGAGTTTTCGAAG+CGG - chr8_2:69229341-69229360 Msa1265140:three_prime_UTR 40.0%
CAAGAATCACATAGCTTAGG+TGG + chr8_2:69229377-69229396 None:intergenic 40.0%
TTTGTTAGCAGAGTGAATGG+TGG + chr8_2:69229465-69229484 None:intergenic 40.0%
!! GAGTTTGTTAGCAGAGTGAA+TGG + chr8_2:69229468-69229487 None:intergenic 40.0%
!! GGAGTAGGTTTAGTTTGAAC+AGG + chr8_2:69229944-69229963 None:intergenic 40.0%
CTATGGCTAATGGAATGTGA+TGG + chr8_2:69230046-69230065 None:intergenic 40.0%
! CAATTTTGGATCGGAATCGA+TGG - chr8_2:69230221-69230240 Msa1265140:CDS 40.0%
CAAGGAGCAACACAATTATG+TGG - chr8_2:69230279-69230298 Msa1265140:intron 40.0%
TTATGAGGTACAGAGAGAAG+AGG - chr8_2:69230322-69230341 Msa1265140:intron 40.0%
GAAAAGCTTATGCAGAAACC+CGG - chr8_2:69230385-69230404 Msa1265140:CDS 40.0%
CAGTCCATTAGCATAGATGA+AGG + chr8_2:69230498-69230517 None:intergenic 40.0%
!! ATGCTAATGGACTGTCCATA+CGG - chr8_2:69230504-69230523 Msa1265140:CDS 40.0%
AAACAAGGTCAGGATAACAG+AGG - chr8_2:69230547-69230566 Msa1265140:CDS 40.0%
TGTCTCTGATCTTGATCTGA+GGG + chr8_2:69230702-69230721 None:intergenic 40.0%
TTGTCTCTGATCTTGATCTG+AGG + chr8_2:69230703-69230722 None:intergenic 40.0%
! TCAGTCGATTTCTTACCAAC+TGG - chr8_2:69230764-69230783 Msa1265140:CDS 40.0%
! AAGAGCATGGTGAAAAAGCT+TGG - chr8_2:69230892-69230911 Msa1265140:CDS 40.0%
GTATCCCTATTCCTATTGGA+TGG - chr8_2:69231140-69231159 Msa1265140:five_prime_UTR 40.0%
ATCCCTATTCCTATTGGATG+GGG - chr8_2:69231142-69231161 Msa1265140:five_prime_UTR 40.0%
ATACAGCTTGAGAAAAGGAG+TGG + chr8_2:69231170-69231189 None:intergenic 40.0%
!! AAGATGGGTATTGAAAGAGG+AGG - chr8_2:69229320-69229339 Msa1265140:three_prime_UTR 40.0%
! GGACTAAAGAGTTTTCGAAG+CGG - chr8_2:69229341-69229360 Msa1265140:three_prime_UTR 40.0%
CAAGAATCACATAGCTTAGG+TGG + chr8_2:69229377-69229396 None:intergenic 40.0%
TTTGTTAGCAGAGTGAATGG+TGG + chr8_2:69229465-69229484 None:intergenic 40.0%
!! GAGTTTGTTAGCAGAGTGAA+TGG + chr8_2:69229468-69229487 None:intergenic 40.0%
!! GGAGTAGGTTTAGTTTGAAC+AGG + chr8_2:69229944-69229963 None:intergenic 40.0%
CTATGGCTAATGGAATGTGA+TGG + chr8_2:69230046-69230065 None:intergenic 40.0%
! CAATTTTGGATCGGAATCGA+TGG - chr8_2:69230221-69230240 Msa1265140:CDS 40.0%
CAAGGAGCAACACAATTATG+TGG - chr8_2:69230279-69230298 Msa1265140:intron 40.0%
TTATGAGGTACAGAGAGAAG+AGG - chr8_2:69230322-69230341 Msa1265140:intron 40.0%
GAAAAGCTTATGCAGAAACC+CGG - chr8_2:69230385-69230404 Msa1265140:CDS 40.0%
CAGTCCATTAGCATAGATGA+AGG + chr8_2:69230498-69230517 None:intergenic 40.0%
!! ATGCTAATGGACTGTCCATA+CGG - chr8_2:69230504-69230523 Msa1265140:CDS 40.0%
AAACAAGGTCAGGATAACAG+AGG - chr8_2:69230547-69230566 Msa1265140:CDS 40.0%
TGTCTCTGATCTTGATCTGA+GGG + chr8_2:69230702-69230721 None:intergenic 40.0%
TTGTCTCTGATCTTGATCTG+AGG + chr8_2:69230703-69230722 None:intergenic 40.0%
! TCAGTCGATTTCTTACCAAC+TGG - chr8_2:69230764-69230783 Msa1265140:CDS 40.0%
! AAGAGCATGGTGAAAAAGCT+TGG - chr8_2:69230892-69230911 Msa1265140:CDS 40.0%
GTATCCCTATTCCTATTGGA+TGG - chr8_2:69231140-69231159 Msa1265140:five_prime_UTR 40.0%
ATCCCTATTCCTATTGGATG+GGG - chr8_2:69231142-69231161 Msa1265140:five_prime_UTR 40.0%
ATACAGCTTGAGAAAAGGAG+TGG + chr8_2:69231170-69231189 None:intergenic 40.0%
! TAAAGAGTTTTCGAAGCGGC+TGG - chr8_2:69229345-69229364 Msa1265140:three_prime_UTR 45.0%
ATCAGAACGGCAAAAAAGCG+CGG + chr8_2:69229414-69229433 None:intergenic 45.0%
GATTCAGCGGAGTCAAAGAA+AGG + chr8_2:69229650-69229669 None:intergenic 45.0%
TTCGTTGTTCCTACTGACGA+CGG - chr8_2:69229722-69229741 Msa1265140:three_prime_UTR 45.0%
AGGAACAACGCTATCGTTCA+TGG + chr8_2:69229924-69229943 None:intergenic 45.0%
AAACTAAACCTACTCCAGCG+CGG - chr8_2:69229948-69229967 Msa1265140:CDS 45.0%
TTATGATTCATCATCCGCGC+TGG + chr8_2:69229965-69229984 None:intergenic 45.0%
TCGTCATCTTCACTTGACGT+AGG - chr8_2:69230159-69230178 Msa1265140:CDS 45.0%
ATCTTCACTTGACGTAGGAG+TGG - chr8_2:69230164-69230183 Msa1265140:CDS 45.0%
GATCGGAATCGATGGTTTCA+GGG - chr8_2:69230229-69230248 Msa1265140:intron 45.0%
ATCGGAATCGATGGTTTCAG+GGG - chr8_2:69230230-69230249 Msa1265140:intron 45.0%
GGGGTGTGAATAGTAACCAA+GGG - chr8_2:69230250-69230269 Msa1265140:intron 45.0%
GGGTGTGAATAGTAACCAAG+GGG - chr8_2:69230251-69230270 Msa1265140:intron 45.0%
TGTGAATAGTAACCAAGGGG+TGG - chr8_2:69230254-69230273 Msa1265140:intron 45.0%
GAAACCCGGCCTAGAATTAA+AGG - chr8_2:69230399-69230418 Msa1265140:CDS 45.0%
! TTTCGGTTCGTTTAGCGAAC+CGG + chr8_2:69230425-69230444 None:intergenic 45.0%
!! AACCGAAATTGACTCGGATG+TGG - chr8_2:69230437-69230456 Msa1265140:CDS 45.0%
GTCCACATCCGAGTCAATTT+CGG + chr8_2:69230442-69230461 None:intergenic 45.0%
GATCAGCAGGGTTATAGAGA+CGG + chr8_2:69230464-69230483 None:intergenic 45.0%
ATAGATGAAGGAACTGCGAG+AGG + chr8_2:69230486-69230505 None:intergenic 45.0%
TTACACATCGCGCACTAATG+AGG - chr8_2:69230735-69230754 Msa1265140:CDS 45.0%
TTAGATTTGGCGCGGTTGTA+CGG - chr8_2:69230855-69230874 Msa1265140:CDS 45.0%
! GGAGAACTTTACGGGACTTT+TGG - chr8_2:69230982-69231001 Msa1265140:CDS 45.0%
CACCCCATCCAATAGGAATA+GGG + chr8_2:69231147-69231166 None:intergenic 45.0%
! GTATAGTCAAGTGACTGGTC+AGG + chr8_2:69229144-69229163 None:intergenic 45.0%
! TAAAGAGTTTTCGAAGCGGC+TGG - chr8_2:69229345-69229364 Msa1265140:three_prime_UTR 45.0%
ATCAGAACGGCAAAAAAGCG+CGG + chr8_2:69229414-69229433 None:intergenic 45.0%
GATTCAGCGGAGTCAAAGAA+AGG + chr8_2:69229650-69229669 None:intergenic 45.0%
TTCGTTGTTCCTACTGACGA+CGG - chr8_2:69229722-69229741 Msa1265140:three_prime_UTR 45.0%
AGGAACAACGCTATCGTTCA+TGG + chr8_2:69229924-69229943 None:intergenic 45.0%
AAACTAAACCTACTCCAGCG+CGG - chr8_2:69229948-69229967 Msa1265140:CDS 45.0%
TTATGATTCATCATCCGCGC+TGG + chr8_2:69229965-69229984 None:intergenic 45.0%
TCGTCATCTTCACTTGACGT+AGG - chr8_2:69230159-69230178 Msa1265140:CDS 45.0%
ATCTTCACTTGACGTAGGAG+TGG - chr8_2:69230164-69230183 Msa1265140:CDS 45.0%
GATCGGAATCGATGGTTTCA+GGG - chr8_2:69230229-69230248 Msa1265140:intron 45.0%
ATCGGAATCGATGGTTTCAG+GGG - chr8_2:69230230-69230249 Msa1265140:intron 45.0%
GGGGTGTGAATAGTAACCAA+GGG - chr8_2:69230250-69230269 Msa1265140:intron 45.0%
GGGTGTGAATAGTAACCAAG+GGG - chr8_2:69230251-69230270 Msa1265140:intron 45.0%
TGTGAATAGTAACCAAGGGG+TGG - chr8_2:69230254-69230273 Msa1265140:intron 45.0%
GAAACCCGGCCTAGAATTAA+AGG - chr8_2:69230399-69230418 Msa1265140:CDS 45.0%
! TTTCGGTTCGTTTAGCGAAC+CGG + chr8_2:69230425-69230444 None:intergenic 45.0%
!! AACCGAAATTGACTCGGATG+TGG - chr8_2:69230437-69230456 Msa1265140:CDS 45.0%
GTCCACATCCGAGTCAATTT+CGG + chr8_2:69230442-69230461 None:intergenic 45.0%
GATCAGCAGGGTTATAGAGA+CGG + chr8_2:69230464-69230483 None:intergenic 45.0%
ATAGATGAAGGAACTGCGAG+AGG + chr8_2:69230486-69230505 None:intergenic 45.0%
TTACACATCGCGCACTAATG+AGG - chr8_2:69230735-69230754 Msa1265140:CDS 45.0%
TTAGATTTGGCGCGGTTGTA+CGG - chr8_2:69230855-69230874 Msa1265140:CDS 45.0%
! GGAGAACTTTACGGGACTTT+TGG - chr8_2:69230982-69231001 Msa1265140:CDS 45.0%
CACCCCATCCAATAGGAATA+GGG + chr8_2:69231147-69231166 None:intergenic 45.0%
!! TTAATTAATTAATAATGATT+TGG - chr8_2:69230119-69230138 Msa1265140:CDS 5.0%
!! TTATTATTATTATTATTGTT+AGG - chr8_2:69230813-69230832 Msa1265140:CDS 5.0%
!! TTAATTAATTAATAATGATT+TGG - chr8_2:69230119-69230138 Msa1265140:CDS 5.0%
!! TTATTATTATTATTATTGTT+AGG - chr8_2:69230813-69230832 Msa1265140:CDS 5.0%
GAGTCAAAGAAAGGCTCGAC+GGG + chr8_2:69229641-69229660 None:intergenic 50.0%
GGAGTCAAAGAAAGGCTCGA+CGG + chr8_2:69229642-69229661 None:intergenic 50.0%
! GGATTTGACGACGGATTCAG+CGG + chr8_2:69229663-69229682 None:intergenic 50.0%
GTTCCTACTGACGACGGTTA+CGG - chr8_2:69229728-69229747 Msa1265140:three_prime_UTR 50.0%
! AGTGGTGCCAGATGCAAACA+CGG - chr8_2:69230182-69230201 Msa1265140:CDS 50.0%
TCTGACACCGTGTTTGCATC+TGG + chr8_2:69230192-69230211 None:intergenic 50.0%
GGATCGGAATCGATGGTTTC+AGG - chr8_2:69230228-69230247 Msa1265140:intron 50.0%
TCGGAATCGATGGTTTCAGG+GGG - chr8_2:69230231-69230250 Msa1265140:intron 50.0%
! GGGGGTGTGAATAGTAACCA+AGG - chr8_2:69230249-69230268 Msa1265140:intron 50.0%
TGGAATGGATCGTGAAGCGA+GGG - chr8_2:69230299-69230318 Msa1265140:intron 50.0%
ATCGTGAAGCGAGGGTTATG+AGG - chr8_2:69230307-69230326 Msa1265140:intron 50.0%
ACCGGCCTTTAATTCTAGGC+CGG + chr8_2:69230407-69230426 None:intergenic 50.0%
GCGAACCGGCCTTTAATTCT+AGG + chr8_2:69230411-69230430 None:intergenic 50.0%
GCATGGTGAAAAAGCTTGGC+TGG - chr8_2:69230896-69230915 Msa1265140:CDS 50.0%
GCACCCCATCCAATAGGAAT+AGG + chr8_2:69231148-69231167 None:intergenic 50.0%
GAGTCAAAGAAAGGCTCGAC+GGG + chr8_2:69229641-69229660 None:intergenic 50.0%
GGAGTCAAAGAAAGGCTCGA+CGG + chr8_2:69229642-69229661 None:intergenic 50.0%
! GGATTTGACGACGGATTCAG+CGG + chr8_2:69229663-69229682 None:intergenic 50.0%
GTTCCTACTGACGACGGTTA+CGG - chr8_2:69229728-69229747 Msa1265140:three_prime_UTR 50.0%
! AGTGGTGCCAGATGCAAACA+CGG - chr8_2:69230182-69230201 Msa1265140:CDS 50.0%
TCTGACACCGTGTTTGCATC+TGG + chr8_2:69230192-69230211 None:intergenic 50.0%
GGATCGGAATCGATGGTTTC+AGG - chr8_2:69230228-69230247 Msa1265140:intron 50.0%
TCGGAATCGATGGTTTCAGG+GGG - chr8_2:69230231-69230250 Msa1265140:intron 50.0%
! GGGGGTGTGAATAGTAACCA+AGG - chr8_2:69230249-69230268 Msa1265140:intron 50.0%
TGGAATGGATCGTGAAGCGA+GGG - chr8_2:69230299-69230318 Msa1265140:intron 50.0%
ATCGTGAAGCGAGGGTTATG+AGG - chr8_2:69230307-69230326 Msa1265140:intron 50.0%
ACCGGCCTTTAATTCTAGGC+CGG + chr8_2:69230407-69230426 None:intergenic 50.0%
GCGAACCGGCCTTTAATTCT+AGG + chr8_2:69230411-69230430 None:intergenic 50.0%
GCATGGTGAAAAAGCTTGGC+TGG - chr8_2:69230896-69230915 Msa1265140:CDS 50.0%
GCACCCCATCCAATAGGAAT+AGG + chr8_2:69231148-69231167 None:intergenic 50.0%
! AGAACGGCAAAAAAGCGCGG+CGG + chr8_2:69229411-69229430 None:intergenic 55.0%
TGCGTCAGCTTTGCACGTGA+CGG + chr8_2:69229546-69229565 None:intergenic 55.0%
!! TGGATTGGCGGAGTGGATGT+CGG + chr8_2:69229594-69229613 None:intergenic 55.0%
TGACCGTAACCGTCGTCAGT+AGG + chr8_2:69229734-69229753 None:intergenic 55.0%
ATGATGCTGAAGCAGCTGCG+TGG - chr8_2:69229756-69229775 Msa1265140:three_prime_UTR 55.0%
TTCATCATCCGCGCTGGAGT+AGG + chr8_2:69229959-69229978 None:intergenic 55.0%
AGTAACCAAGGGGTGGTGCA+AGG - chr8_2:69230261-69230280 Msa1265140:intron 55.0%
GTGGAATGGATCGTGAAGCG+AGG - chr8_2:69230298-69230317 Msa1265140:intron 55.0%
CCGGCCTTTAATTCTAGGCC+GGG + chr8_2:69230406-69230425 None:intergenic 55.0%
CCCGGCCTAGAATTAAAGGC+CGG - chr8_2:69230403-69230422 Msa1265140:CDS 55.0%
GAACTGCGAGAGGATCAGCA+GGG + chr8_2:69230476-69230495 None:intergenic 55.0%
AAAGTGGGAACGACGCCGTA+TGG + chr8_2:69230522-69230541 None:intergenic 55.0%
TTTGGCGCGGTTGTACGGTA+TGG - chr8_2:69230860-69230879 Msa1265140:CDS 55.0%
TTGGCGCGGTTGTACGGTAT+GGG - chr8_2:69230861-69230880 Msa1265140:CDS 55.0%
! AGAACGGCAAAAAAGCGCGG+CGG + chr8_2:69229411-69229430 None:intergenic 55.0%
TGCGTCAGCTTTGCACGTGA+CGG + chr8_2:69229546-69229565 None:intergenic 55.0%
!! TGGATTGGCGGAGTGGATGT+CGG + chr8_2:69229594-69229613 None:intergenic 55.0%
TGACCGTAACCGTCGTCAGT+AGG + chr8_2:69229734-69229753 None:intergenic 55.0%
ATGATGCTGAAGCAGCTGCG+TGG - chr8_2:69229756-69229775 Msa1265140:three_prime_UTR 55.0%
TTCATCATCCGCGCTGGAGT+AGG + chr8_2:69229959-69229978 None:intergenic 55.0%
AGTAACCAAGGGGTGGTGCA+AGG - chr8_2:69230261-69230280 Msa1265140:intron 55.0%
GTGGAATGGATCGTGAAGCG+AGG - chr8_2:69230298-69230317 Msa1265140:intron 55.0%
CCGGCCTTTAATTCTAGGCC+GGG + chr8_2:69230406-69230425 None:intergenic 55.0%
CCCGGCCTAGAATTAAAGGC+CGG - chr8_2:69230403-69230422 Msa1265140:CDS 55.0%
GAACTGCGAGAGGATCAGCA+GGG + chr8_2:69230476-69230495 None:intergenic 55.0%
AAAGTGGGAACGACGCCGTA+TGG + chr8_2:69230522-69230541 None:intergenic 55.0%
TTTGGCGCGGTTGTACGGTA+TGG - chr8_2:69230860-69230879 Msa1265140:CDS 55.0%
TTGGCGCGGTTGTACGGTAT+GGG - chr8_2:69230861-69230880 Msa1265140:CDS 55.0%
! GAACGGCAAAAAAGCGCGGC+GGG + chr8_2:69229410-69229429 None:intergenic 60.0%
! GCTTTGCACGTGACGGAAGC+TGG + chr8_2:69229539-69229558 None:intergenic 60.0%
!! ACGACGAGCGAGTGGATTGG+CGG + chr8_2:69229606-69229625 None:intergenic 60.0%
GTGACGACGAGCGAGTGGAT+TGG + chr8_2:69229609-69229628 None:intergenic 60.0%
GGCGGTGGAGGATTTGACGA+CGG + chr8_2:69229672-69229691 None:intergenic 60.0%
TTGCTCCTTGCACCACCCCT+TGG + chr8_2:69230269-69230288 None:intergenic 60.0%
GGAACTGCGAGAGGATCAGC+AGG + chr8_2:69230477-69230496 None:intergenic 60.0%
TGGCGCGGTTGTACGGTATG+GGG - chr8_2:69230862-69230881 Msa1265140:CDS 60.0%
ATGGGGGCAGAGCAAGAGCA+TGG - chr8_2:69230879-69230898 Msa1265140:CDS 60.0%
GGAGTGGCACCCCATCCAAT+AGG + chr8_2:69231154-69231173 None:intergenic 60.0%
! GAACGGCAAAAAAGCGCGGC+GGG + chr8_2:69229410-69229429 None:intergenic 60.0%
! GCTTTGCACGTGACGGAAGC+TGG + chr8_2:69229539-69229558 None:intergenic 60.0%
!! ACGACGAGCGAGTGGATTGG+CGG + chr8_2:69229606-69229625 None:intergenic 60.0%
GTGACGACGAGCGAGTGGAT+TGG + chr8_2:69229609-69229628 None:intergenic 60.0%
GGCGGTGGAGGATTTGACGA+CGG + chr8_2:69229672-69229691 None:intergenic 60.0%
TTGCTCCTTGCACCACCCCT+TGG + chr8_2:69230269-69230288 None:intergenic 60.0%
GGAACTGCGAGAGGATCAGC+AGG + chr8_2:69230477-69230496 None:intergenic 60.0%
TGGCGCGGTTGTACGGTATG+GGG - chr8_2:69230862-69230881 Msa1265140:CDS 60.0%
ATGGGGGCAGAGCAAGAGCA+TGG - chr8_2:69230879-69230898 Msa1265140:CDS 60.0%
GGAGTGGCACCCCATCCAAT+AGG + chr8_2:69231154-69231173 None:intergenic 60.0%
ACATCCAGACGCGCTCGTGG+CGG + chr8_2:69229496-69229515 None:intergenic 65.0%
CACACATCCAGACGCGCTCG+TGG + chr8_2:69229499-69229518 None:intergenic 65.0%
!! GAGCGAGTGGATTGGCGGAG+TGG + chr8_2:69229601-69229620 None:intergenic 65.0%
CGTTCGTGACGACGAGCGAG+TGG + chr8_2:69229614-69229633 None:intergenic 65.0%
GGCGCGGTTGTACGGTATGG+GGG - chr8_2:69230863-69230882 Msa1265140:CDS 65.0%
ACATCCAGACGCGCTCGTGG+CGG + chr8_2:69229496-69229515 None:intergenic 65.0%
CACACATCCAGACGCGCTCG+TGG + chr8_2:69229499-69229518 None:intergenic 65.0%
!! GAGCGAGTGGATTGGCGGAG+TGG + chr8_2:69229601-69229620 None:intergenic 65.0%
CGTTCGTGACGACGAGCGAG+TGG + chr8_2:69229614-69229633 None:intergenic 65.0%
GGCGCGGTTGTACGGTATGG+GGG - chr8_2:69230863-69230882 Msa1265140:CDS 65.0%
CATCCAGACGCGCTCGTGGC+GGG + chr8_2:69229495-69229514 None:intergenic 70.0%
CATCCAGACGCGCTCGTGGC+GGG + chr8_2:69229495-69229514 None:intergenic 70.0%
CTTCCCGCCACGAGCGCGTC+TGG - chr8_2:69229489-69229508 Msa1265140:three_prime_UTR 75.0%
TGCAGCAGCAGCGGCGGTGG+AGG + chr8_2:69229684-69229703 None:intergenic 75.0%
TGCTGCAGCAGCAGCGGCGG+TGG + chr8_2:69229687-69229706 None:intergenic 75.0%
GGCTGCTGCAGCAGCAGCGG+CGG + chr8_2:69229690-69229709 None:intergenic 75.0%
CGCGGCTGCTGCAGCAGCAG+CGG + chr8_2:69229693-69229712 None:intergenic 75.0%
CTTCCCGCCACGAGCGCGTC+TGG - chr8_2:69229489-69229508 Msa1265140:three_prime_UTR 75.0%
TGCAGCAGCAGCGGCGGTGG+AGG + chr8_2:69229684-69229703 None:intergenic 75.0%
TGCTGCAGCAGCAGCGGCGG+TGG + chr8_2:69229687-69229706 None:intergenic 75.0%
GGCTGCTGCAGCAGCAGCGG+CGG + chr8_2:69229690-69229709 None:intergenic 75.0%
CGCGGCTGCTGCAGCAGCAG+CGG + chr8_2:69229693-69229712 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 69229143 69231254 69229143 ID=Msa1265140;Name=Msa1265140
chr8_2 mRNA 69229143 69231254 69229143 ID=Msa1265140-mRNA-1;Parent=Msa1265140;Name=Msa1265140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=180|1|1|1|1|1|2|709|377
chr8_2 exon 69229143 69230241 69229143 ID=Msa1265140-mRNA-1:exon:22869;Parent=Msa1265140-mRNA-1
chr8_2 exon 69230331 69231254 69230331 ID=Msa1265140-mRNA-1:exon:22868;Parent=Msa1265140-mRNA-1
chr8_2 five_prime_UTR 69231075 69231254 69231075 ID=Msa1265140-mRNA-1:five_prime_utr;Parent=Msa1265140-mRNA-1
chr8_2 CDS 69230331 69231074 69230331 ID=Msa1265140-mRNA-1:cds;Parent=Msa1265140-mRNA-1
chr8_2 CDS 69229852 69230241 69229852 ID=Msa1265140-mRNA-1:cds;Parent=Msa1265140-mRNA-1
chr8_2 three_prime_UTR 69229143 69229851 69229143 ID=Msa1265140-mRNA-1:three_prime_utr;Parent=Msa1265140-mRNA-1
Gene Sequence

>Msa1265140

ATGGGTATTGAAAGAGGAGGACTAAAGAGTTTTCGAAGCGGCTGGAGTGTGCCACCTAAGCTATGTGATTCTTGCAAGCTTACTCCCGCCGCGCTTTTTTGCCGTTCTGATTCTGCGTTTCTATGCATCAACTGTGATTCCACCATTCACTCTGCTAACAAACTCTCTTCCCGCCACGAGCGCGTCTGGATGTGTGAAGTTTGTGAACAAGCACCAGCTTCCGTCACGTGCAAAGCTGACGCAGCTGCTCTATGCGTCACGTGCGATTCCGACATCCACTCCGCCAATCCACTCGCTCGTCGTCACGAACGTGTTCCCGTCGAGCCTTTCTTTGACTCCGCTGAATCCGTCGTCAAATCCTCCACCGCCGCTGCTGCTGCAGCAGCCGCGTCTTTCAATTTCGTTGTTCCTACTGACGACGGTTACGGTCAAGATGATGCTGAAGCAGCTGCGTGGCTGATTCCGAATCCTAATTTCGGATCCAAACTCAATGAAACTCAAGATATCAAAACTAGAGAGATGTTCTTCTCTGATATGGATCCATTTCTTGATTTTGATTACTCAAACAATTTCCAGAACAATAATAACTGCAGCAACGCCATGAACGATAGCGTTGTTCCTGTTCAAACTAAACCTACTCCAGCGCGGATGATGAATCATAACTCAGAAGGTTGCTTTGACATTGATTTTTGCAGATCGAAGCTATCTTCCTTTAACTATCCATCACATTCCATTAGCCATAGCGTTTCGTCATCTTCACTTGACGTAGGAGTGGTGCCAGATGCAAACACGGTGTCAGAGATATCATACAATTTTGGATCGGAATCGATGGTTTCAGGGGGTGTGAATAGTAACCAAGGGGTGGTGCAAGGAGCAACACAATTATGTGGAATGGATCGTGAAGCGAGGGTTATGAGGTACAGAGAGAAGAGGAAGAACCGAAAATTCGAGAAGACTATTCGTTATGCTTCGCGAAAAGCTTATGCAGAAACCCGGCCTAGAATTAAAGGCCGGTTCGCTAAACGAACCGAAATTGACTCGGATGTGGACCGTCTCTATAACCCTGCTGATCCTCTCGCAGTTCCTTCATCTATGCTAATGGACTGTCCATACGGCGTCGTTCCCACTTTTTAG
Protein sequence

>Msa1265140

MGIERGGLKSFRSGWSVPPKLCDSCKLTPAALFCRSDSAFLCINCDSTIHSANKLSSRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEPFFDSAESVVKSSTAAAAAAAASFNFVVPTDDGYGQDDAEAAAWLIPNPNFGSKLNETQDIKTREMFFSDMDPFLDFDYSNNFQNNNNCSNAMNDSVVPVQTKPTPARMMNHNSEGCFDIDFCRSKLSSFNYPSHSISHSVSSSSLDVGVVPDANTVSEISYNFGSESMVSGGVNSNQGVVQGATQLCGMDREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDRLYNPADPLAVPSSMLMDCPYGVVPTF*