AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1342980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 90 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCAAATTTACTATTATTA+AGG 0.219077 tig0006056:+243005 Msa1342980:five_prime_UTR
ACTCTTAAGTGTTTGATAAA+AGG 0.221142 tig0006056:+243496 Msa1342980:five_prime_UTR
GAGTAAATGGGTTGCTAATT+AGG 0.224027 tig0006056:+245743 Msa1342980:intron
TGTGAAACTTGCAGAGTAAA+TGG 0.228097 tig0006056:+245730 Msa1342980:intron
GTACTGGCACAAAGCGCTTT+TGG 0.320365 tig0006056:-247638 Msa1342990:CDS
GAGGAGTTGTTTCTTGTGTT+TGG 0.339030 tig0006056:-242979 None:intergenic
ATGGATGGGAGGATCGATTC+TGG 0.341412 tig0006056:+243203 Msa1342980:five_prime_UTR
CTTGGATTTGTATATCAGTT+TGG 0.352958 tig0006056:+245789 Msa1342980:CDS
CTTACATGGGGCTTTCTTGA+TGG 0.362260 tig0006056:+243529 Msa1342980:five_prime_UTR
TGAGAAGAAAGAAGAGGAAA+AGG 0.398179 tig0006056:-242815 None:intergenic
CATAAGAAACTTTCAGAGCT+TGG 0.401756 tig0006056:-247704 Msa1342990:CDS
AAGAGAGAGGGGAGAAGTGG+TGG 0.421098 tig0006056:-242951 None:intergenic
GGAGCAGTTGCCTTTGAGCT+TGG 0.421255 tig0006056:+247674 Msa1342980:CDS
AAGAAATCACAGGAAACATA+AGG 0.428279 tig0006056:-242856 None:intergenic
GAAAATTGTGTATACCTAGA+TGG 0.447883 tig0006056:+243980 Msa1342980:five_prime_UTR
AGAGAGAGGGGAGAAGTGGT+GGG 0.449867 tig0006056:-242950 None:intergenic
AGGCGATGGTGTGGTGGTAG+AGG 0.455578 tig0006056:-242904 None:intergenic
AATAATAGTAAATTTGAGAA+AGG 0.461336 tig0006056:-243001 None:intergenic
CCTACACAAATAATTCTTGA+AGG 0.462068 tig0006056:-244295 None:intergenic
TGGCTTTGCGCCAAGCTCAA+AGG 0.464700 tig0006056:-247684 Msa1342990:CDS
GCCAGTACGGTTGCATCCAC+AGG 0.465545 tig0006056:+247653 Msa1342980:CDS
TCGCAAAATGTTGCAATGGA+TGG 0.472943 tig0006056:+243188 Msa1342980:five_prime_UTR
TCTAATTCTAATTCTCCCTC+TGG 0.476801 tig0006056:-247766 Msa1342990:intron
AGAGAGGGGAGAAGTGGTGG+GGG 0.479528 tig0006056:-242948 None:intergenic
TGGAAATTGCCCTATGTGAA+TGG 0.485069 tig0006056:+244270 Msa1342980:five_prime_UTR
GCCGCTGCAGTGGTGATCCT+CGG 0.490613 tig0006056:-247605 Msa1342990:CDS
ATCGCCTTCTCCAAATCCTC+TGG 0.490776 tig0006056:+242920 Msa1342980:five_prime_UTR
TCCTGTGGATGCAACCGTAC+TGG 0.493313 tig0006056:-247654 Msa1342990:CDS
CGCAAAATGTTGCAATGGAT+GGG 0.493532 tig0006056:+243189 Msa1342980:five_prime_UTR
TGGGTTGCTAATTAGGAATG+TGG 0.499357 tig0006056:+245750 Msa1342980:CDS
TATCAGTTTGGAAAAGCAAA+GGG 0.500558 tig0006056:+245801 Msa1342980:CDS
TGTAAGAGAGAGGGGAGAAG+TGG 0.502957 tig0006056:-242954 None:intergenic
GGGAAAGGAAGCAAAGGTCT+TGG 0.503925 tig0006056:+245771 Msa1342980:CDS
CTCAAAGGCAACTGCTCCTG+TGG 0.511925 tig0006056:-247669 Msa1342990:CDS
TGTTTGGTTTGTAAGAGAGA+GGG 0.514068 tig0006056:-242963 None:intergenic
AAGGATCACTAGAACTTACA+TGG 0.517172 tig0006056:+243515 Msa1342980:five_prime_UTR
GTGTTTGGTTTGTAAGAGAG+AGG 0.518181 tig0006056:-242964 None:intergenic
GGCAGACACCACCACTCTGC+AGG 0.524794 tig0006056:+246641 Msa1342980:intron
GACATGAATCTCTACCATCT+AGG 0.524863 tig0006056:-243994 None:intergenic
CAAGGAAGAAAAGAAATCAC+AGG 0.525074 tig0006056:-242866 None:intergenic
ATTCTAATTCTCCCTCTGGC+AGG 0.529285 tig0006056:-247762 Msa1342990:intron
AATAGTAAATTTGAGAAAGG+AGG 0.529905 tig0006056:-242998 None:intergenic
GTTTGGTTTGTAAGAGAGAG+GGG 0.538206 tig0006056:-242962 None:intergenic
ATTCTCCCTCTGGCAGGATG+AGG 0.539910 tig0006056:-247756 Msa1342990:intron
AGAAATCACAGGAAACATAA+GGG 0.541703 tig0006056:-242855 None:intergenic
GTGAAACTTGCAGAGTAAAT+GGG 0.542934 tig0006056:+245731 Msa1342980:intron
GAGAGAGGGGAGAAGTGGTG+GGG 0.543540 tig0006056:-242949 None:intergenic
CTTGAAGGTCCCATTCACAT+AGG 0.544823 tig0006056:-244280 None:intergenic
AAGAGTTGAGAAGAAAGAAG+AGG 0.546240 tig0006056:-242821 None:intergenic
AGGGTTCTATAGAGAGAGCA+AGG 0.546817 tig0006056:-242884 None:intergenic
GGGTTGCTAATTAGGAATGT+GGG 0.547124 tig0006056:+245751 Msa1342980:CDS
TTGAAGGTCCCATTCACATA+GGG 0.549497 tig0006056:-244279 None:intergenic
CCTTCAAGAATTATTTGTGT+AGG 0.553857 tig0006056:+244295 Msa1342980:five_prime_UTR
GCTAATTAGGAATGTGGGAA+AGG 0.555262 tig0006056:+245756 Msa1342980:CDS
GCGCGTGTTCTGTATTGATG+TGG 0.555628 tig0006056:-242711 None:intergenic
GGAAATTGCCCTATGTGAAT+GGG 0.557558 tig0006056:+244271 Msa1342980:five_prime_UTR
GTGGAGCATGATTAAGAATG+AGG 0.560579 tig0006056:+244366 Msa1342980:exon
GACAGACGTTGAGGTAGAAG+TGG 0.566091 tig0006056:-246675 None:intergenic
ATATCAGTTTGGAAAAGCAA+AGG 0.569094 tig0006056:+245800 Msa1342980:CDS
TGAACCAGAGGATTTGGAGA+AGG 0.570585 tig0006056:-242924 None:intergenic
GGCGATGGTGTGGTGGTAGA+GGG 0.570655 tig0006056:-242903 None:intergenic
AAAAGCGCTTTGTGCCAGTA+CGG 0.571570 tig0006056:+247640 Msa1342980:CDS
AGGATCACTAGAACTTACAT+GGG 0.573846 tig0006056:+243516 Msa1342980:five_prime_UTR
ACTATGAGAGAGAGATTCCA+TGG 0.586821 tig0006056:+243453 Msa1342980:five_prime_UTR
CGCGTGTTCTGTATTGATGT+GGG 0.593198 tig0006056:-242710 None:intergenic
ATTTGGAGAAGGCGATGGTG+TGG 0.593947 tig0006056:-242913 None:intergenic
TGGAGAAGGCGATGGTGTGG+TGG 0.596377 tig0006056:-242910 None:intergenic
GCTCAAATTCACATTGAGAG+TGG 0.599825 tig0006056:+244250 Msa1342980:five_prime_UTR
GATGGTAGAGATTCATGTCA+AGG 0.601564 tig0006056:+243998 Msa1342980:five_prime_UTR
CATCTCGCAAAATGTTGCAA+TGG 0.602901 tig0006056:+243184 Msa1342980:five_prime_UTR
AAGTAGCTTTCAACATACCA+TGG 0.613194 tig0006056:-243470 None:intergenic
AAAGCAAAGGGGCTGCAAGA+CGG 0.618030 tig0006056:+245813 Msa1342980:CDS
AGAAAGCGTGCTTCACACAC+AGG 0.618451 tig0006056:-242745 None:intergenic
TGCATCCTCATCCTGCCAGA+GGG 0.619028 tig0006056:+247751 Msa1342980:CDS
AGAGGATTTGGAGAAGGCGA+TGG 0.624308 tig0006056:-242918 None:intergenic
ACCGAGGATCACCACTGCAG+CGG 0.626779 tig0006056:+247604 Msa1342980:CDS
AAAATGTTGCAATGGATGGG+AGG 0.633582 tig0006056:+243192 Msa1342980:five_prime_UTR
GAATGTGGGAAAGGAAGCAA+AGG 0.638943 tig0006056:+245765 Msa1342980:CDS
TGCATTTAAGAAGAAAGCAT+CGG 0.641151 tig0006056:-242786 None:intergenic
AGTTGTAGCTGCCGCTGCAG+TGG 0.652303 tig0006056:-247615 Msa1342990:CDS
AGCATCGGCACGTAACACAA+TGG 0.655268 tig0006056:-242771 None:intergenic
ATGCATCCTCATCCTGCCAG+AGG 0.659033 tig0006056:+247750 Msa1342980:CDS
ACGTTGAGGTAGAAGTGGAA+CGG 0.661363 tig0006056:-246670 None:intergenic
GGAATCTGCCTGCAGAGTGG+TGG 0.673619 tig0006056:-246649 None:intergenic
ACAACGTAAGACAGACGTTG+AGG 0.674704 tig0006056:-246684 None:intergenic
AGTGGCTTAAGAAAAGCAAG+TGG 0.691519 tig0006056:+244347 Msa1342980:five_prime_UTR
GAGTTTCATACAAGTAACCG+AGG 0.700364 tig0006056:+247588 Msa1342980:intron
ATCAGTTTGGAAAAGCAAAG+GGG 0.703892 tig0006056:+245802 Msa1342980:CDS
GGATCACTAGAACTTACATG+GGG 0.725522 tig0006056:+243517 Msa1342980:five_prime_UTR
AACGGAATCTGCCTGCAGAG+TGG 0.737403 tig0006056:-246652 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTGTTTAATTAAAAGTTAT+TGG + tig0006056:244812-244831 Msa1342980:intron 10.0%
!!! TTTTAATTATGTAACATTAT+TGG + tig0006056:246620-246639 Msa1342980:intron 10.0%
!! CTATTCTATTAAAATTTAAA+TGG - tig0006056:246761-246780 None:intergenic 10.0%
!! AATAATAGTAAATTTGAGAA+AGG - tig0006056:243004-243023 None:intergenic 15.0%
!! TCTCAAATTTACTATTATTA+AGG + tig0006056:243005-243024 Msa1342980:five_prime_UTR 15.0%
!! ATAAAGAAGAAAATAAGAAT+GGG - tig0006056:243560-243579 None:intergenic 15.0%
!!! AAATCAATTTTACAAAACAT+TGG - tig0006056:243663-243682 None:intergenic 15.0%
!!! TGAATTATTTTTTTTGTATG+TGG + tig0006056:244035-244054 Msa1342980:intron 15.0%
!!! GAATTATTTTTTTTGTATGT+GGG + tig0006056:244036-244055 Msa1342980:intron 15.0%
!! ATATTTATATGAGAATCATT+TGG + tig0006056:244102-244121 Msa1342980:intron 15.0%
!!! ACTTTTATAAATAATTTGTG+AGG - tig0006056:245859-245878 None:intergenic 15.0%
!! AATATAAATGTTAACATAAG+AGG - tig0006056:245997-246016 None:intergenic 15.0%
!!! TAACATTTATATTGATAACA+AGG + tig0006056:246004-246023 Msa1342980:intron 15.0%
!! TGAAATAGTATAACTATCAA+TGG - tig0006056:243093-243112 None:intergenic 20.0%
!! TATCAAATTTGATTGCTTTA+TGG + tig0006056:243406-243425 Msa1342980:intron 20.0%
!! CATAAAGAAGAAAATAAGAA+TGG - tig0006056:243561-243580 None:intergenic 20.0%
!! GCATTTCTTAAATTTCTTTA+TGG + tig0006056:243580-243599 Msa1342980:intron 20.0%
!!! AAATTTCTTTATGGTTTTGT+TGG + tig0006056:243589-243608 Msa1342980:intron 20.0%
!!! AATTTCTTTATGGTTTTGTT+GGG + tig0006056:243590-243609 Msa1342980:intron 20.0%
!!! TTTTTGAGATTTTCTAATTG+AGG + tig0006056:243912-243931 Msa1342980:intron 20.0%
!! AATGTGAAAACTATAAGATT+TGG - tig0006056:244170-244189 None:intergenic 20.0%
!!! ATGTTTTGTTTTGTTATGTA+GGG + tig0006056:244228-244247 Msa1342980:intron 20.0%
!!! GGTGTTTTATATTTTATCAT+TGG + tig0006056:244490-244509 Msa1342980:intron 20.0%
!!! ATATTTTATCATTGGTGTTA+TGG + tig0006056:244498-244517 Msa1342980:intron 20.0%
!! TGTTATGAAAAATATACTAG+AGG + tig0006056:244998-245017 Msa1342980:intron 20.0%
!! TTCATTAATCTTTGGTATTA+AGG + tig0006056:245075-245094 Msa1342980:intron 20.0%
!!! TATTTTTTAGCACTCTAATT+TGG + tig0006056:245531-245550 Msa1342980:intron 20.0%
!!! TTTGTGATCTCAATAAATTT+TGG + tig0006056:245641-245660 Msa1342980:intron 20.0%
!! TTGCATAGATAACATTAAAA+TGG - tig0006056:245694-245713 None:intergenic 20.0%
!! TTACTTCTGTTTAGATATAT+AGG + tig0006056:245878-245897 Msa1342980:intron 20.0%
!!! AACATCTAATGTCATTTATA+AGG + tig0006056:246112-246131 Msa1342980:intron 20.0%
!! TCTAGTAGAATAAAATAGAA+TGG + tig0006056:246289-246308 Msa1342980:intron 20.0%
!! TTTAAAAAAGGTCATTATTC+AGG + tig0006056:246548-246567 Msa1342980:intron 20.0%
!! TTATAATTCTACATTACTAG+TGG - tig0006056:247078-247097 None:intergenic 20.0%
! AATAGTAAATTTGAGAAAGG+AGG - tig0006056:243001-243020 None:intergenic 25.0%
! TCAATCGCTCAAAAAAAATA+TGG - tig0006056:243065-243084 None:intergenic 25.0%
! TCAAAAGCAAAAATCATCAA+TGG - tig0006056:243137-243156 None:intergenic 25.0%
!!! GATGATTTTTGCTTTTGATT+CGG + tig0006056:243139-243158 Msa1342980:intron 25.0%
! TATTATTATCATCCCATTCT+TGG + tig0006056:243277-243296 Msa1342980:intron 25.0%
! AATTTATGTAGAGGATAACT+TGG - tig0006056:243332-243351 None:intergenic 25.0%
! AAGTTATCCTCTACATAAAT+TGG + tig0006056:243331-243350 Msa1342980:intron 25.0%
! ACTCTTAAGTGTTTGATAAA+AGG + tig0006056:243496-243515 Msa1342980:five_prime_UTR 25.0%
! GAGAAAGAACAAAATCATTA+GGG - tig0006056:243619-243638 None:intergenic 25.0%
! TGAGAAAGAACAAAATCATT+AGG - tig0006056:243620-243639 None:intergenic 25.0%
! CAAACTGATAAAAAATTGAG+AGG - tig0006056:243890-243909 None:intergenic 25.0%
! TAATATTGAGAACCTGAATT+TGG - tig0006056:244138-244157 None:intergenic 25.0%
!! TTTCACATTTGTTACATAAG+AGG + tig0006056:244181-244200 Msa1342980:intron 25.0%
!!! CATGTTTTGTTTTGTTATGT+AGG + tig0006056:244227-244246 Msa1342980:intron 25.0%
!! CAAAATATAAGTGCTGTAAA+TGG + tig0006056:244399-244418 Msa1342980:intron 25.0%
! TTATATGCAAATTTCTGCAT+AGG + tig0006056:244469-244488 Msa1342980:intron 25.0%
!!! TTAAAGATATTGCTGCTTTT+TGG + tig0006056:244571-244590 Msa1342980:intron 25.0%
!!! TAAAGATATTGCTGCTTTTT+GGG + tig0006056:244572-244591 Msa1342980:intron 25.0%
! TTTGTGTTTCACTTAAAATG+TGG + tig0006056:244683-244702 Msa1342980:intron 25.0%
!!! TGATAAATGATCTCTTGTTT+TGG - tig0006056:244724-244743 None:intergenic 25.0%
! ATATAATATGTGAACACCTA+TGG - tig0006056:244971-244990 None:intergenic 25.0%
!! TGATACTTGATAATTGTCAA+CGG + tig0006056:245929-245948 Msa1342980:intron 25.0%
! AAAGTACAACAACAAATATG+AGG - tig0006056:245971-245990 None:intergenic 25.0%
! TAATGATAGCAATCAAGTAA+TGG - tig0006056:246228-246247 None:intergenic 25.0%
!!! TTTGCATGATTGTTTTTGTA+TGG + tig0006056:246345-246364 Msa1342980:intron 25.0%
! TATGTCTATATTCTATATGC+TGG + tig0006056:246519-246538 Msa1342980:intron 25.0%
! TGCTGGATAAGATTTAAAAA+AGG + tig0006056:246536-246555 Msa1342980:intron 25.0%
! AAGATATTCTCATTAATGTG+AGG - tig0006056:246594-246613 None:intergenic 25.0%
! ATGAGATATACTATAATGAG+AGG + tig0006056:246810-246829 Msa1342980:intron 25.0%
! TAACTATGTAACTGTCATAT+GGG - tig0006056:246943-246962 None:intergenic 25.0%
! TTAACTATGTAACTGTCATA+TGG - tig0006056:246944-246963 None:intergenic 25.0%
! ATAATTCCAACATAATGTAC+TGG - tig0006056:247154-247173 None:intergenic 25.0%
! ATTTACTTTCTCTTGAAGAT+CGG - tig0006056:247330-247349 Msa1342990:three_prime_UTR 25.0%
! ATCTTCAAGAGAAAGTAAAT+GGG + tig0006056:247330-247349 Msa1342980:intron 25.0%
! TGCATTTAAGAAGAAAGCAT+CGG - tig0006056:242789-242808 None:intergenic 30.0%
AGAAATCACAGGAAACATAA+GGG - tig0006056:242858-242877 None:intergenic 30.0%
AAGAAATCACAGGAAACATA+AGG - tig0006056:242859-242878 None:intergenic 30.0%
!!! TTTTGATTCGGTTCTACATT+CGG + tig0006056:243151-243170 Msa1342980:intron 30.0%
TATGAATAGACACCAAGAAT+GGG - tig0006056:243292-243311 None:intergenic 30.0%
ATATGAATAGACACCAAGAA+TGG - tig0006056:243293-243312 None:intergenic 30.0%
TAAGTCACTTGCATGAAAAA+CGG + tig0006056:243692-243711 Msa1342980:intron 30.0%
!!! TTTGTTTGTGTGTGTCATTT+TGG + tig0006056:243758-243777 Msa1342980:intron 30.0%
! AATGATTGTTGTCCATTTTG+AGG + tig0006056:243792-243811 Msa1342980:intron 30.0%
ATTGAGAGGAGACTTATAAA+GGG - tig0006056:243876-243895 None:intergenic 30.0%
AATTGAGAGGAGACTTATAA+AGG - tig0006056:243877-243896 None:intergenic 30.0%
GAAAATTGTGTATACCTAGA+TGG + tig0006056:243980-243999 Msa1342980:five_prime_UTR 30.0%
CCTACACAAATAATTCTTGA+AGG - tig0006056:244298-244317 None:intergenic 30.0%
CCTTCAAGAATTATTTGTGT+AGG + tig0006056:244295-244314 Msa1342980:five_prime_UTR 30.0%
!! AAAGAGACATTTTGATGAAG+TGG + tig0006056:244329-244348 Msa1342980:five_prime_UTR 30.0%
!!! GTTTATTTTGTGCAAGTGAA+TGG + tig0006056:244445-244464 Msa1342980:intron 30.0%
!!! AAAGATATTGCTGCTTTTTG+GGG + tig0006056:244573-244592 Msa1342980:intron 30.0%
CAAACATTATCTCTCATTGA+AGG - tig0006056:244796-244815 None:intergenic 30.0%
AAGTTATTGGACAAATTCCT+TGG + tig0006056:244825-244844 Msa1342980:intron 30.0%
! AGAGTGCTAAAAAATATCCT+CGG - tig0006056:245527-245546 None:intergenic 30.0%
CTTGGATTTGTATATCAGTT+TGG + tig0006056:245789-245808 Msa1342980:CDS 30.0%
ATATCAGTTTGGAAAAGCAA+AGG + tig0006056:245800-245819 Msa1342980:CDS 30.0%
TATCAGTTTGGAAAAGCAAA+GGG + tig0006056:245801-245820 Msa1342980:CDS 30.0%
CAAACATACTATTAGCAATG+AGG - tig0006056:246151-246170 None:intergenic 30.0%
! AGAAAAAGCATAACAAGTTC+AGG - tig0006056:246497-246516 None:intergenic 30.0%
TATTCTCATTAATGTGAGGA+AGG - tig0006056:246590-246609 None:intergenic 30.0%
GCAGTAACAAAAGGAATAAA+GGG - tig0006056:246724-246743 None:intergenic 30.0%
AGCAGTAACAAAAGGAATAA+AGG - tig0006056:246725-246744 None:intergenic 30.0%
AGATGAAAAGCAGTAACAAA+AGG - tig0006056:246733-246752 None:intergenic 30.0%
!!! CTTTTTTCTGAAGATCTAGT+TGG - tig0006056:246840-246859 None:intergenic 30.0%
AATATCAAGTGTCATCTAAC+AGG + tig0006056:246869-246888 Msa1342980:intron 30.0%
AACTATGTAACTGTCATATG+GGG - tig0006056:246942-246961 None:intergenic 30.0%
!! GTAAGTGTTGAATATAGTGA+AGG - tig0006056:246989-247008 None:intergenic 30.0%
TGGATACAAATGCAAATAGT+CGG - tig0006056:247044-247063 None:intergenic 30.0%
TACTAGTGGTTCACATATAA+TGG - tig0006056:247064-247083 None:intergenic 30.0%
TTATGTTGGAATTATACGCA+AGG + tig0006056:247159-247178 Msa1342980:intron 30.0%
GATCTTCAAGAGAAAGTAAA+TGG + tig0006056:247329-247348 Msa1342980:intron 30.0%
TGCTACATTCTACATCTATT+GGG - tig0006056:247439-247458 Msa1342990:three_prime_UTR 30.0%
TTGCTACATTCTACATCTAT+TGG - tig0006056:247440-247459 Msa1342990:three_prime_UTR 30.0%
GATACTAAGAAAACATAGAC+TGG + tig0006056:247470-247489 Msa1342980:intron 30.0%
TGTATGAAACTCACAAAAGA+GGG - tig0006056:247580-247599 Msa1342990:CDS 30.0%
TTGTATGAAACTCACAAAAG+AGG - tig0006056:247581-247600 Msa1342990:CDS 30.0%
TGAGAAGAAAGAAGAGGAAA+AGG - tig0006056:242818-242837 None:intergenic 35.0%
AAGAGTTGAGAAGAAAGAAG+AGG - tig0006056:242824-242843 None:intergenic 35.0%
CAAGGAAGAAAAGAAATCAC+AGG - tig0006056:242869-242888 None:intergenic 35.0%
!! TGTTTGGTTTGTAAGAGAGA+GGG - tig0006056:242966-242985 None:intergenic 35.0%
AAGCATGCCAATTTATGTAG+AGG - tig0006056:243341-243360 None:intergenic 35.0%
AAGTAGCTTTCAACATACCA+TGG - tig0006056:243473-243492 None:intergenic 35.0%
AAGGATCACTAGAACTTACA+TGG + tig0006056:243515-243534 Msa1342980:five_prime_UTR 35.0%
AGGATCACTAGAACTTACAT+GGG + tig0006056:243516-243535 Msa1342980:five_prime_UTR 35.0%
!! TGTTGTCCATTTTGAGGAAT+TGG + tig0006056:243798-243817 Msa1342980:intron 35.0%
TTCCATCCAATTCCTCAAAA+TGG - tig0006056:243807-243826 None:intergenic 35.0%
! GAGATTCATGTCAAGGTATT+TGG + tig0006056:244005-244024 Msa1342980:intron 35.0%
! GAATGAAGAGTTGATTCCAT+AGG + tig0006056:244952-244971 Msa1342980:intron 35.0%
GGTGGTTGTTCATTAATCTT+TGG + tig0006056:245067-245086 Msa1342980:intron 35.0%
AAATTGCAGCAGGAATCAAT+AGG - tig0006056:245118-245137 None:intergenic 35.0%
CTGCAAAATACACTTTATGC+AGG - tig0006056:245143-245162 None:intergenic 35.0%
AATAGAGTTACAGCACATGA+TGG - tig0006056:245166-245185 None:intergenic 35.0%
! TTCACGAATTTTCGCGAATT+TGG - tig0006056:245318-245337 None:intergenic 35.0%
CAAATTCGCGAAAATTCACA+TGG + tig0006056:245362-245381 Msa1342980:intron 35.0%
GAGAACAATGATCGAAATCA+TGG - tig0006056:245433-245452 None:intergenic 35.0%
!! CAACTTTGCTATTTCTGATC+TGG + tig0006056:245486-245505 Msa1342980:intron 35.0%
!!! GGTTTTATTTTGACATGCAG+TGG + tig0006056:245611-245630 Msa1342980:intron 35.0%
TGTGAAACTTGCAGAGTAAA+TGG + tig0006056:245730-245749 Msa1342980:intron 35.0%
GTGAAACTTGCAGAGTAAAT+GGG + tig0006056:245731-245750 Msa1342980:intron 35.0%
!! GAGTAAATGGGTTGCTAATT+AGG + tig0006056:245743-245762 Msa1342980:intron 35.0%
ATCAGTTTGGAAAAGCAAAG+GGG + tig0006056:245802-245821 Msa1342980:CDS 35.0%
!! TATTGGTTCTCGATGATGAA+GGG + tig0006056:246075-246094 Msa1342980:intron 35.0%
TATTGCATACTCAATAGTCC+CGG + tig0006056:246246-246265 Msa1342980:intron 35.0%
TCTCATGCATTATAATCAGC+AGG - tig0006056:246796-246815 None:intergenic 35.0%
ACTATGTAACTGTCATATGG+GGG - tig0006056:246941-246960 None:intergenic 35.0%
TGACAGTTACATAGTTAACG+TGG + tig0006056:246946-246965 Msa1342980:intron 35.0%
! AGTGTTGAATATAGTGAAGG+TGG - tig0006056:246986-247005 None:intergenic 35.0%
GATACAAATGCAAATAGTCG+GGG - tig0006056:247042-247061 None:intergenic 35.0%
GGATACAAATGCAAATAGTC+GGG - tig0006056:247043-247062 None:intergenic 35.0%
AACGCGGAATTCTTCAAAAT+TGG - tig0006056:247106-247125 None:intergenic 35.0%
AATCTGATCCATGTTTAACG+CGG - tig0006056:247122-247141 None:intergenic 35.0%
ATTCCAACATAATGTACTGG+CGG - tig0006056:247151-247170 None:intergenic 35.0%
TTTCTCTTGAAGATCGGAAA+AGG - tig0006056:247324-247343 Msa1342990:three_prime_UTR 35.0%
GTTATGATGCTGCTCATAAT+TGG + tig0006056:247380-247399 Msa1342980:intron 35.0%
CATAAGAAACTTTCAGAGCT+TGG - tig0006056:247707-247726 Msa1342990:CDS 35.0%
TCTAATTCTAATTCTCCCTC+TGG - tig0006056:247769-247788 Msa1342990:intron 35.0%
!! GTTTGGTTTGTAAGAGAGAG+GGG - tig0006056:242965-242984 None:intergenic 40.0%
!! GTGTTTGGTTTGTAAGAGAG+AGG - tig0006056:242967-242986 None:intergenic 40.0%
!! GAGGAGTTGTTTCTTGTGTT+TGG - tig0006056:242982-243001 None:intergenic 40.0%
CATCTCGCAAAATGTTGCAA+TGG + tig0006056:243184-243203 Msa1342980:five_prime_UTR 40.0%
TCGCAAAATGTTGCAATGGA+TGG + tig0006056:243188-243207 Msa1342980:five_prime_UTR 40.0%
CGCAAAATGTTGCAATGGAT+GGG + tig0006056:243189-243208 Msa1342980:five_prime_UTR 40.0%
AAAATGTTGCAATGGATGGG+AGG + tig0006056:243192-243211 Msa1342980:five_prime_UTR 40.0%
ACTATGAGAGAGAGATTCCA+TGG + tig0006056:243453-243472 Msa1342980:five_prime_UTR 40.0%
GGATCACTAGAACTTACATG+GGG + tig0006056:243517-243536 Msa1342980:five_prime_UTR 40.0%
!! GTCCATTTTGAGGAATTGGA+TGG + tig0006056:243802-243821 Msa1342980:intron 40.0%
ACCACTTCTGATTGCAAGTT+TGG + tig0006056:243946-243965 Msa1342980:intron 40.0%
TCCAAACTTGCAATCAGAAG+TGG - tig0006056:243950-243969 None:intergenic 40.0%
GACATGAATCTCTACCATCT+AGG - tig0006056:243997-244016 None:intergenic 40.0%
GATGGTAGAGATTCATGTCA+AGG + tig0006056:243998-244017 Msa1342980:five_prime_UTR 40.0%
! GAGAATCATTTGGTCTTCAG+AGG + tig0006056:244112-244131 Msa1342980:intron 40.0%
GCTCAAATTCACATTGAGAG+TGG + tig0006056:244250-244269 Msa1342980:five_prime_UTR 40.0%
TGGAAATTGCCCTATGTGAA+TGG + tig0006056:244270-244289 Msa1342980:five_prime_UTR 40.0%
GGAAATTGCCCTATGTGAAT+GGG + tig0006056:244271-244290 Msa1342980:five_prime_UTR 40.0%
TTGAAGGTCCCATTCACATA+GGG - tig0006056:244282-244301 None:intergenic 40.0%
AGTGGCTTAAGAAAAGCAAG+TGG + tig0006056:244347-244366 Msa1342980:five_prime_UTR 40.0%
GTGGAGCATGATTAAGAATG+AGG + tig0006056:244366-244385 Msa1342980:exon 40.0%
ATTGGACAAATTCCTTGGTG+TGG + tig0006056:244830-244849 Msa1342980:intron 40.0%
CAGCAGGAATCAATAGGTTT+AGG - tig0006056:245112-245131 None:intergenic 40.0%
TATGCAGGAAAAATTGCAGC+AGG - tig0006056:245128-245147 None:intergenic 40.0%
ACCATAGTCACATAATTCGC+TGG + tig0006056:245206-245225 Msa1342980:intron 40.0%
TCCAGCGAATTATGTGACTA+TGG - tig0006056:245210-245229 None:intergenic 40.0%
CACATAATTCGCTGGATTGA+CGG + tig0006056:245214-245233 Msa1342980:intron 40.0%
TCGCGAAAATTCACATGGTT+TGG + tig0006056:245367-245386 Msa1342980:intron 40.0%
CGCGAAAATTCACATGGTTT+GGG + tig0006056:245368-245387 Msa1342980:intron 40.0%
!! TTGCTATTTCTGATCTGGTC+CGG + tig0006056:245491-245510 Msa1342980:intron 40.0%
TGGGTTGCTAATTAGGAATG+TGG + tig0006056:245750-245769 Msa1342980:CDS 40.0%
GGGTTGCTAATTAGGAATGT+GGG + tig0006056:245751-245770 Msa1342980:CDS 40.0%
GCTAATTAGGAATGTGGGAA+AGG + tig0006056:245756-245775 Msa1342980:CDS 40.0%
TAACAAGGTCTTTCTAACGC+AGG + tig0006056:246019-246038 Msa1342980:intron 40.0%
!! GTATTGGTTCTCGATGATGA+AGG + tig0006056:246074-246093 Msa1342980:intron 40.0%
ATTGCATACTCAATAGTCCC+GGG + tig0006056:246247-246266 Msa1342980:intron 40.0%
TGGAAGTGAGAAAGAAACTG+TGG + tig0006056:246309-246328 Msa1342980:intron 40.0%
TCATGTGCTTAGGTATTCGT+GGG + tig0006056:246396-246415 Msa1342980:intron 40.0%
ACTCTCAGAAGTTAGGACTT+GGG - tig0006056:246435-246454 None:intergenic 40.0%
CTCATTAATGTGAGGAAGGA+AGG - tig0006056:246586-246605 None:intergenic 40.0%
TTTGTAGAAGCAGCTTGTCA+CGG - tig0006056:246913-246932 None:intergenic 40.0%
TATGTAACTGTCATATGGGG+GGG - tig0006056:246939-246958 None:intergenic 40.0%
CTATGTAACTGTCATATGGG+GGG - tig0006056:246940-246959 None:intergenic 40.0%
TATAGTGAAGGTGGCATAGA+AGG - tig0006056:246977-246996 None:intergenic 40.0%
GAAGAATTCCGCGTTAAACA+TGG + tig0006056:247111-247130 Msa1342980:intron 40.0%
! TTCCAACATAATGTACTGGC+GGG - tig0006056:247150-247169 None:intergenic 40.0%
AACCCAATACTGCTCGTTAT+GGG + tig0006056:247506-247525 Msa1342980:intron 40.0%
TTTGATCTGTTCAGCTCTGT+TGG - tig0006056:247549-247568 Msa1342990:three_prime_UTR 40.0%
GAGTTTCATACAAGTAACCG+AGG + tig0006056:247588-247607 Msa1342980:intron 40.0%
! CGCGTGTTCTGTATTGATGT+GGG - tig0006056:242713-242732 None:intergenic 45.0%
AGGGTTCTATAGAGAGAGCA+AGG - tig0006056:242887-242906 None:intergenic 45.0%
TGAACCAGAGGATTTGGAGA+AGG - tig0006056:242927-242946 None:intergenic 45.0%
CTTACATGGGGCTTTCTTGA+TGG + tig0006056:243529-243548 Msa1342980:five_prime_UTR 45.0%
CTTGAAGGTCCCATTCACAT+AGG - tig0006056:244283-244302 None:intergenic 45.0%
CCTCTATGTCAGTTAGCAGT+TGG - tig0006056:244765-244784 None:intergenic 45.0%
CCAACTGCTAACTGACATAG+AGG + tig0006056:244762-244781 Msa1342980:intron 45.0%
ACTGCTAACTGACATAGAGG+AGG + tig0006056:244765-244784 Msa1342980:intron 45.0%
ATGTGCAACATACCACACCA+AGG - tig0006056:244845-244864 None:intergenic 45.0%
CATCACCATAGCACTCTAAG+GGG - tig0006056:245048-245067 None:intergenic 45.0%
CCATCACCATAGCACTCTAA+GGG - tig0006056:245049-245068 None:intergenic 45.0%
ACCATCACCATAGCACTCTA+AGG - tig0006056:245050-245069 None:intergenic 45.0%
!! TTAGAGTGCTATGGTGATGG+TGG + tig0006056:245049-245068 Msa1342980:intron 45.0%
GCAGACACAGAGAGCAATAA+GGG - tig0006056:245455-245474 None:intergenic 45.0%
AGCAGACACAGAGAGCAATA+AGG - tig0006056:245456-245475 None:intergenic 45.0%
TTATTGCTCTCTGTGTCTGC+TGG + tig0006056:245455-245474 Msa1342980:intron 45.0%
TATCCTCGGCTAACACAAAC+CGG - tig0006056:245513-245532 None:intergenic 45.0%
AACCTCATAGCAGCTGCAAT+CGG - tig0006056:245595-245614 None:intergenic 45.0%
GAATGTGGGAAAGGAAGCAA+AGG + tig0006056:245765-245784 Msa1342980:CDS 45.0%
AAGCTCCAAAGCTTACCATG+AGG + tig0006056:246044-246063 Msa1342980:intron 45.0%
AGCTCCAAAGCTTACCATGA+GGG + tig0006056:246045-246064 Msa1342980:intron 45.0%
TCAACCCTCATGGTAAGCTT+TGG - tig0006056:246052-246071 None:intergenic 45.0%
AAGCTTACCATGAGGGTTGA+AGG + tig0006056:246052-246071 Msa1342980:intron 45.0%
! ACCATGAGGGTTGAAGGTAT+TGG + tig0006056:246058-246077 Msa1342980:intron 45.0%
ACCAATACCTTCAACCCTCA+TGG - tig0006056:246062-246081 None:intergenic 45.0%
GAGAAAGAAACTGTGGCGTA+AGG + tig0006056:246316-246335 Msa1342980:intron 45.0%
CACGAGTATGTCATGTGCTT+AGG + tig0006056:246386-246405 Msa1342980:intron 45.0%
GTCATGTGCTTAGGTATTCG+TGG + tig0006056:246395-246414 Msa1342980:intron 45.0%
GACTCTCAGAAGTTAGGACT+TGG - tig0006056:246436-246455 None:intergenic 45.0%
GTAAGGGACTCTCAGAAGTT+AGG - tig0006056:246442-246461 None:intergenic 45.0%
CAAGTTCAGGAAGACACATG+TGG - tig0006056:246484-246503 None:intergenic 45.0%
ACGTTGAGGTAGAAGTGGAA+CGG - tig0006056:246673-246692 None:intergenic 45.0%
ACAACGTAAGACAGACGTTG+AGG - tig0006056:246687-246706 None:intergenic 45.0%
! TCCAACATAATGTACTGGCG+GGG - tig0006056:247149-247168 None:intergenic 45.0%
AAGGCACATAGCGAAGACAA+AGG + tig0006056:247178-247197 Msa1342980:intron 45.0%
CTCTTGAAGATCGGAAAAGG+AGG - tig0006056:247321-247340 Msa1342990:three_prime_UTR 45.0%
GAACCCAATACTGCTCGTTA+TGG + tig0006056:247505-247524 Msa1342980:intron 45.0%
!! AAAAGCGCTTTGTGCCAGTA+CGG + tig0006056:247640-247659 Msa1342980:CDS 45.0%
ATTCTAATTCTCCCTCTGGC+AGG - tig0006056:247765-247784 Msa1342990:intron 45.0%
!! TATTCTATTAAAATTTAAAT+GGG - tig0006056:246760-246779 None:intergenic 5.0%
! GCGCGTGTTCTGTATTGATG+TGG - tig0006056:242714-242733 None:intergenic 50.0%
! AGAAAGCGTGCTTCACACAC+AGG - tig0006056:242748-242767 None:intergenic 50.0%
!! AGCATCGGCACGTAACACAA+TGG - tig0006056:242774-242793 None:intergenic 50.0%
ATTTGGAGAAGGCGATGGTG+TGG - tig0006056:242916-242935 None:intergenic 50.0%
AGAGGATTTGGAGAAGGCGA+TGG - tig0006056:242921-242940 None:intergenic 50.0%
ATCGCCTTCTCCAAATCCTC+TGG + tig0006056:242920-242939 Msa1342980:five_prime_UTR 50.0%
TGTAAGAGAGAGGGGAGAAG+TGG - tig0006056:242957-242976 None:intergenic 50.0%
! ATGGATGGGAGGATCGATTC+TGG + tig0006056:243203-243222 Msa1342980:five_prime_UTR 50.0%
GGTCTTCAGAGGCCAAATTC+AGG + tig0006056:244123-244142 Msa1342980:intron 50.0%
! TTCTGCCCCTTAGAGTGCTA+TGG + tig0006056:245040-245059 Msa1342980:intron 50.0%
! CCCTTAGAGTGCTATGGTGA+TGG + tig0006056:245046-245065 Msa1342980:intron 50.0%
!! TACGCGAAAGTACCGCGAAT+CGG - tig0006056:245265-245284 None:intergenic 50.0%
GCAAAGAACTACATCAGCCC+AGG - tig0006056:245411-245430 None:intergenic 50.0%
! TACCGATTGCAGCTGCTATG+AGG + tig0006056:245590-245609 Msa1342980:intron 50.0%
GGGAAAGGAAGCAAAGGTCT+TGG + tig0006056:245771-245790 Msa1342980:CDS 50.0%
AAAGCAAAGGGGCTGCAAGA+CGG + tig0006056:245813-245832 Msa1342980:CDS 50.0%
! ACATACTCGTGTTGCTGTGC+TGG - tig0006056:246377-246396 None:intergenic 50.0%
TGCTTAGGTATTCGTGGGAG+TGG + tig0006056:246401-246420 Msa1342980:intron 50.0%
GCTTAGGTATTCGTGGGAGT+GGG + tig0006056:246402-246421 Msa1342980:intron 50.0%
AGAGTCCCTTACCTACCTCT+TGG + tig0006056:246450-246469 Msa1342980:intron 50.0%
GAGTCCCTTACCTACCTCTT+GGG + tig0006056:246451-246470 Msa1342980:intron 50.0%
ACAGCCCAAGAGGTAGGTAA+GGG - tig0006056:246458-246477 None:intergenic 50.0%
GTTCAGGAAGACACATGTGG+AGG - tig0006056:246481-246500 None:intergenic 50.0%
GACAGACGTTGAGGTAGAAG+TGG - tig0006056:246678-246697 None:intergenic 50.0%
TCCCCGCCAGTACATTATGT+TGG + tig0006056:247145-247164 Msa1342980:intron 50.0%
GGCCCATAACGAGCAGTATT+GGG - tig0006056:247511-247530 Msa1342990:three_prime_UTR 50.0%
TGGCCCATAACGAGCAGTAT+TGG - tig0006056:247512-247531 Msa1342990:three_prime_UTR 50.0%
TGTTGGATGTCACGTCTGTG+TGG - tig0006056:247532-247551 Msa1342990:three_prime_UTR 50.0%
!! GTACTGGCACAAAGCGCTTT+TGG - tig0006056:247641-247660 Msa1342990:CDS 50.0%
GGGGGTTGAACCAGAGGATT+TGG - tig0006056:242933-242952 None:intergenic 55.0%
AGAGAGAGGGGAGAAGTGGT+GGG - tig0006056:242953-242972 None:intergenic 55.0%
AAGAGAGAGGGGAGAAGTGG+TGG - tig0006056:242954-242973 None:intergenic 55.0%
ATTGACGGCGAACCGCGAAT+TGG + tig0006056:245229-245248 Msa1342980:intron 55.0%
TTCGCGGTACTTTCGCGTAC+TGG + tig0006056:245266-245285 Msa1342980:intron 55.0%
TGCTAAGCTTCCTGCAGCCT+GGG + tig0006056:245391-245410 Msa1342980:intron 55.0%
AATAGTCCCGGGCGATAGCA+CGG + tig0006056:246258-246277 Msa1342980:intron 55.0%
TAGGTATTCGTGGGAGTGGG+AGG + tig0006056:246405-246424 Msa1342980:intron 55.0%
GACAGCCCAAGAGGTAGGTA+AGG - tig0006056:246459-246478 None:intergenic 55.0%
AACGGAATCTGCCTGCAGAG+TGG - tig0006056:246655-246674 None:intergenic 55.0%
TCCTGTGGATGCAACCGTAC+TGG - tig0006056:247657-247676 Msa1342990:CDS 55.0%
CTCAAAGGCAACTGCTCCTG+TGG - tig0006056:247672-247691 Msa1342990:CDS 55.0%
GGAGCAGTTGCCTTTGAGCT+TGG + tig0006056:247674-247693 Msa1342980:CDS 55.0%
! TGGCTTTGCGCCAAGCTCAA+AGG - tig0006056:247687-247706 Msa1342990:CDS 55.0%
ATGCATCCTCATCCTGCCAG+AGG + tig0006056:247750-247769 Msa1342980:CDS 55.0%
TGCATCCTCATCCTGCCAGA+GGG + tig0006056:247751-247770 Msa1342980:CDS 55.0%
ATTCTCCCTCTGGCAGGATG+AGG - tig0006056:247759-247778 Msa1342990:intron 55.0%
GGCGATGGTGTGGTGGTAGA+GGG - tig0006056:242906-242925 None:intergenic 60.0%
AGGCGATGGTGTGGTGGTAG+AGG - tig0006056:242907-242926 None:intergenic 60.0%
TGGAGAAGGCGATGGTGTGG+TGG - tig0006056:242913-242932 None:intergenic 60.0%
! AGTGGTGGGGGTTGAACCAG+AGG - tig0006056:242939-242958 None:intergenic 60.0%
AGAGAGGGGAGAAGTGGTGG+GGG - tig0006056:242951-242970 None:intergenic 60.0%
GAGAGAGGGGAGAAGTGGTG+GGG - tig0006056:242952-242971 None:intergenic 60.0%
GGTTCGCGCGAACCAATTCG+CGG - tig0006056:245244-245263 None:intergenic 60.0%
GTGCTAAGCTTCCTGCAGCC+TGG + tig0006056:245390-245409 Msa1342980:intron 60.0%
ACTACATCAGCCCAGGCTGC+AGG - tig0006056:245404-245423 None:intergenic 60.0%
! GGTCCGGTTTGTGTTAGCCG+AGG + tig0006056:245507-245526 Msa1342980:intron 60.0%
ATAGTCCCGGGCGATAGCAC+GGG + tig0006056:246259-246278 Msa1342980:intron 60.0%
TGGAGGACAGCCCAAGAGGT+AGG - tig0006056:246464-246483 None:intergenic 60.0%
CATGTGGAGGACAGCCCAAG+AGG - tig0006056:246468-246487 None:intergenic 60.0%
GGAATCTGCCTGCAGAGTGG+TGG - tig0006056:246652-246671 None:intergenic 60.0%
ACCGAGGATCACCACTGCAG+CGG + tig0006056:247604-247623 Msa1342980:CDS 60.0%
AGTTGTAGCTGCCGCTGCAG+TGG - tig0006056:247618-247637 Msa1342990:CDS 60.0%
GCCAGTACGGTTGCATCCAC+AGG + tig0006056:247653-247672 Msa1342980:CDS 60.0%
!! GGTTCGCGCGAACCGATTCG+CGG + tig0006056:245250-245269 Msa1342980:intron 65.0%
TAGTCCCGGGCGATAGCACG+GGG + tig0006056:246260-246279 Msa1342980:intron 65.0%
GGCAGACACCACCACTCTGC+AGG + tig0006056:246641-246660 Msa1342980:intron 65.0%
GCCGCTGCAGTGGTGATCCT+CGG - tig0006056:247608-247627 Msa1342990:CDS 65.0%
TCTCGCCCCGTGCTATCGCC+CGG - tig0006056:246268-246287 None:intergenic 70.0%
CTCGCCCCGTGCTATCGCCC+GGG - tig0006056:246267-246286 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0006056 gene 242708 247827 242708 ID=Msa1342980;Name=Msa1342980
tig0006056 mRNA 242708 247827 242708 ID=Msa1342980-mRNA-1;Parent=Msa1342980;Name=Msa1342980-mRNA-1;_AED=0.35;_eAED=0.35;_QI=672|0.71|0.75|0.75|0.42|0.37|8|0|126
tig0006056 exon 242708 243026 242708 ID=Msa1342980-mRNA-1:exon:3862;Parent=Msa1342980-mRNA-1
tig0006056 exon 243180 243236 243180 ID=Msa1342980-mRNA-1:exon:3863;Parent=Msa1342980-mRNA-1
tig0006056 exon 243445 243550 243445 ID=Msa1342980-mRNA-1:exon:3864;Parent=Msa1342980-mRNA-1
tig0006056 exon 243964 244019 243964 ID=Msa1342980-mRNA-1:exon:3865;Parent=Msa1342980-mRNA-1
tig0006056 exon 244249 244387 244249 ID=Msa1342980-mRNA-1:exon:3866;Parent=Msa1342980-mRNA-1
tig0006056 exon 245744 245834 245744 ID=Msa1342980-mRNA-1:exon:3867;Parent=Msa1342980-mRNA-1
tig0006056 exon 246646 246704 246646 ID=Msa1342980-mRNA-1:exon:3868;Parent=Msa1342980-mRNA-1
tig0006056 exon 247602 247827 247602 ID=Msa1342980-mRNA-1:exon:3869;Parent=Msa1342980-mRNA-1
tig0006056 five_prime_UTR 242708 243026 242708 ID=Msa1342980-mRNA-1:five_prime_utr;Parent=Msa1342980-mRNA-1
tig0006056 five_prime_UTR 243180 243236 243180 ID=Msa1342980-mRNA-1:five_prime_utr;Parent=Msa1342980-mRNA-1
tig0006056 five_prime_UTR 243445 243550 243445 ID=Msa1342980-mRNA-1:five_prime_utr;Parent=Msa1342980-mRNA-1
tig0006056 five_prime_UTR 243964 244019 243964 ID=Msa1342980-mRNA-1:five_prime_utr;Parent=Msa1342980-mRNA-1
tig0006056 five_prime_UTR 244249 244382 244249 ID=Msa1342980-mRNA-1:five_prime_utr;Parent=Msa1342980-mRNA-1
tig0006056 CDS 244383 244387 244383 ID=Msa1342980-mRNA-1:cds;Parent=Msa1342980-mRNA-1
tig0006056 CDS 245744 245834 245744 ID=Msa1342980-mRNA-1:cds;Parent=Msa1342980-mRNA-1
tig0006056 CDS 246646 246704 246646 ID=Msa1342980-mRNA-1:cds;Parent=Msa1342980-mRNA-1
tig0006056 CDS 247602 247827 247602 ID=Msa1342980-mRNA-1:cds;Parent=Msa1342980-mRNA-1
Gene Sequence

>Msa1342980

ATGAGAGTAAATGGGTTGCTAATTAGGAATGTGGGAAAGGAAGCAAAGGTCTTGGATTTGTATATCAGTTTGGAAAAGCAAAGGGGCTGCAAGACGACACCACCACTCTGCAGGCAGATTCCGTTCCACTTCTACCTCAACGTCTGTCTTACGTTTAACCGAGGATCACCACTGCAGCGGCAGCTACAACTCCAAAAGCGCTTTGTGCCAGTACGGTTGCATCCACAGGAGCAGTTGCCTTTGAGCTTGGCGCAAAGCCAAGCTCTGAAAGTTTCTTATGTGATTCAGCATAATCTCGAAAAAATGCATCCTCATCCTGCCAGAGGGAGAATTAGAATTAGAAGAAAGAAAAAACATGAAACAGCAGACAGATTCATTTAA
Protein sequence

>Msa1342980

MRVNGLLIRNVGKEAKVLDLYISLEKQRGCKTTPPLCRQIPFHFYLNVCLTFNRGSPLQRQLQLQKRFVPVRLHPQEQLPLSLAQSQALKVSYVIQHNLEKMHPHPARGRIRIRRKKKHETADRFI*