Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344600 | KEH43991.1 | 89.952 | 627 | 11 | 3 | 1 | 627 | 1 | 575 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344600 | sp|Q43117|KPYA_RICCO | 53.763 | 558 | 196 | 6 | 72 | 626 | 84 | 582 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344600 | A0A072VQQ3 | 89.952 | 627 | 11 | 3 | 1 | 627 | 1 | 575 | 0.0 | 1125 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0135840 | Msa1344600 | 0.811142 | 8.117182e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344600 | MtrunA17_Chr1g0206791 | 89.837 | 551 | 6 | 2 | 77 | 627 | 1 | 501 | 0.0 | 993 |
| Msa1344600 | MtrunA17_Chr1g0188101 | 52.143 | 560 | 204 | 6 | 72 | 626 | 69 | 569 | 0.0 | 574 |
| Msa1344600 | MtrunA17_Chr1g0202291 | 38.175 | 537 | 263 | 12 | 92 | 626 | 103 | 572 | 1.48e-103 | 325 |
| Msa1344600 | MtrunA17_Chr6g0463101 | 37.175 | 538 | 271 | 9 | 69 | 605 | 82 | 553 | 5.46e-103 | 324 |
| Msa1344600 | MtrunA17_Chr5g0400361 | 37.313 | 536 | 267 | 10 | 93 | 626 | 78 | 546 | 3.03e-99 | 313 |
| Msa1344600 | MtrunA17_Chr6g0448901 | 29.575 | 541 | 287 | 16 | 93 | 605 | 21 | 495 | 2.66e-62 | 214 |
| Msa1344600 | MtrunA17_Chr4g0043311 | 29.336 | 542 | 293 | 16 | 93 | 608 | 8 | 485 | 3.71e-59 | 206 |
| Msa1344600 | MtrunA17_Chr7g0263711 | 29.908 | 545 | 286 | 16 | 93 | 608 | 11 | 488 | 1.96e-58 | 204 |
| Msa1344600 | MtrunA17_Chr4g0043301 | 28.913 | 543 | 294 | 13 | 93 | 608 | 11 | 488 | 3.87e-57 | 201 |
| Msa1344600 | MtrunA17_Chr7g0265591 | 23.175 | 548 | 325 | 15 | 94 | 608 | 30 | 514 | 4.99e-36 | 142 |
| Msa1344600 | MtrunA17_Chr1g0197911 | 24.044 | 549 | 318 | 16 | 94 | 608 | 30 | 513 | 3.24e-34 | 137 |
| Msa1344600 | MtrunA17_Chr1g0179541 | 26.273 | 373 | 208 | 10 | 94 | 446 | 30 | 355 | 7.41e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1344600 | AT3G22960.1 | 54.054 | 555 | 193 | 6 | 75 | 626 | 100 | 595 | 0.0 | 592 |
| Msa1344600 | AT5G52920.1 | 36.194 | 536 | 275 | 9 | 92 | 626 | 110 | 579 | 9.46e-103 | 324 |
| Msa1344600 | AT1G32440.1 | 38.889 | 522 | 248 | 12 | 92 | 610 | 99 | 552 | 1.08e-98 | 313 |
| Msa1344600 | AT5G63680.3 | 30.314 | 541 | 283 | 18 | 93 | 605 | 21 | 495 | 1.75e-61 | 213 |
| Msa1344600 | AT5G63680.1 | 30.314 | 541 | 283 | 18 | 93 | 605 | 21 | 495 | 1.75e-61 | 213 |
| Msa1344600 | AT5G63680.2 | 30.314 | 541 | 283 | 18 | 93 | 605 | 21 | 495 | 1.75e-61 | 213 |
| Msa1344600 | AT5G08570.1 | 28.092 | 566 | 310 | 16 | 65 | 605 | 2 | 495 | 3.98e-60 | 209 |
| Msa1344600 | AT5G08570.2 | 28.092 | 566 | 310 | 16 | 65 | 605 | 2 | 495 | 3.98e-60 | 209 |
| Msa1344600 | AT5G08570.3 | 28.092 | 566 | 310 | 16 | 65 | 605 | 2 | 495 | 3.98e-60 | 209 |
| Msa1344600 | AT3G04050.1 | 28.261 | 552 | 290 | 17 | 93 | 608 | 17 | 498 | 2.57e-58 | 204 |
| Msa1344600 | AT3G25960.1 | 29.135 | 532 | 298 | 15 | 93 | 608 | 17 | 485 | 5.08e-58 | 203 |
| Msa1344600 | AT3G55650.1 | 28.440 | 545 | 298 | 16 | 93 | 608 | 17 | 498 | 7.02e-57 | 200 |
| Msa1344600 | AT5G56350.1 | 29.368 | 538 | 292 | 15 | 93 | 605 | 9 | 483 | 9.43e-55 | 194 |
| Msa1344600 | AT4G26390.1 | 28.864 | 537 | 296 | 16 | 93 | 605 | 8 | 482 | 1.72e-53 | 191 |
| Msa1344600 | AT3G55810.1 | 27.500 | 520 | 274 | 16 | 93 | 606 | 17 | 439 | 3.09e-43 | 162 |
| Msa1344600 | AT3G52990.1 | 23.358 | 548 | 324 | 15 | 94 | 608 | 30 | 514 | 3.48e-32 | 131 |
| Msa1344600 | AT2G36580.1 | 22.604 | 553 | 322 | 15 | 94 | 608 | 30 | 514 | 9.42e-30 | 124 |
| Msa1344600 | AT3G52990.2 | 22.519 | 524 | 310 | 15 | 118 | 608 | 1 | 461 | 4.19e-27 | 115 |
| Msa1344600 | AT3G49160.3 | 36.641 | 131 | 76 | 3 | 266 | 390 | 446 | 575 | 4.57e-17 | 85.5 |
| Msa1344600 | AT3G49160.1 | 36.641 | 131 | 76 | 3 | 266 | 390 | 534 | 663 | 4.94e-17 | 85.5 |
Find 160 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTCTTTCAAAATTGAATT+TGG | 0.133791 | tig0006809:-54020 | None:intergenic |
| CCAGAGCCAAATGTAGTTTC+TGG | 0.243805 | tig0006809:+52249 | Msa1344600:CDS |
| AATCATCGTGTTTCAAATCT+TGG | 0.260002 | tig0006809:+50875 | Msa1344600:CDS |
| AAGAAGCTTAATGAGGAAAA+TGG | 0.264950 | tig0006809:+51211 | Msa1344600:CDS |
| GGGAAGTTTGGGTTTGGATA+TGG | 0.265237 | tig0006809:+51000 | Msa1344600:CDS |
| TGTTGCATTGGAGGGAAGTT+TGG | 0.281638 | tig0006809:+50988 | Msa1344600:CDS |
| AAGCGAAGATTTATTGTAAT+AGG | 0.286700 | tig0006809:-53506 | None:intergenic |
| AATGGCATCGTGATGTTATT+AGG | 0.306322 | tig0006809:+51182 | Msa1344600:CDS |
| GGTTTCAGAAGGAGAATTAA+TGG | 0.312589 | tig0006809:+51021 | Msa1344600:CDS |
| TTACATAAGGACAACAAAAT+AGG | 0.319211 | tig0006809:-54983 | None:intergenic |
| GCAATGATGCTCCAAGTTTA+TGG | 0.326757 | tig0006809:-53709 | None:intergenic |
| TGGTCGGTCGCACAACAAAC+TGG | 0.332899 | tig0006809:-50609 | None:intergenic |
| TGGTCCTGCTTGTAGTTCAT+TGG | 0.339798 | tig0006809:+51090 | Msa1344600:CDS |
| TGGCTGGCTGTGTGCAGTCA+TGG | 0.342802 | tig0006809:+53978 | Msa1344600:CDS |
| TGAAGGGTTTCCAGATATAC+TGG | 0.344249 | tig0006809:-50843 | None:intergenic |
| GTGAGGAAATCCAGTATATC+TGG | 0.344738 | tig0006809:+50833 | Msa1344600:CDS |
| AGTCTTTCAAAATTGAATTT+GGG | 0.355830 | tig0006809:-54019 | None:intergenic |
| GTTGCATTGGAGGGAAGTTT+GGG | 0.365799 | tig0006809:+50989 | Msa1344600:CDS |
| GATAGATAGATGTTGGGGTT+TGG | 0.370311 | tig0006809:-50675 | None:intergenic |
| CAGATTCATGTTGTTGATCA+TGG | 0.377261 | tig0006809:+51271 | Msa1344600:CDS |
| GGCTGGCTGTGTGCAGTCAT+GGG | 0.379834 | tig0006809:+53979 | Msa1344600:CDS |
| AATTTCAGGAAGATTCAATA+TGG | 0.381587 | tig0006809:+51907 | Msa1344600:intron |
| GAGTCAGCTATTGGTTCATT+TGG | 0.382199 | tig0006809:+53599 | Msa1344600:CDS |
| ATGCAACTGTGCTGTTGAAA+TGG | 0.385400 | tig0006809:+53754 | Msa1344600:CDS |
| CAGCCATGCATTCTAGATAA+TGG | 0.388811 | tig0006809:-54874 | None:intergenic |
| ATCTCTCCAGAAACTACATT+TGG | 0.404637 | tig0006809:-52255 | None:intergenic |
| TGAGCAAATTCCTACAGTTC+AGG | 0.405326 | tig0006809:+53276 | Msa1344600:CDS |
| CAACCATGCTGACTCTGTTA+AGG | 0.410845 | tig0006809:+52949 | Msa1344600:CDS |
| TATTTCCTCCAGGTTATGAA+TGG | 0.413481 | tig0006809:-53194 | None:intergenic |
| GGAGAGATGGAAAGCTTGTC+AGG | 0.415630 | tig0006809:+52270 | Msa1344600:CDS |
| TTGTCTGGTGAGTCAGCTAT+TGG | 0.419272 | tig0006809:+53590 | Msa1344600:CDS |
| TGGTCTTAACCTGAATTGAT+TGG | 0.425014 | tig0006809:-54854 | None:intergenic |
| AAAGCAAAGATGGGAGGATC+TGG | 0.425744 | tig0006809:-54633 | None:intergenic |
| GGTGATGAAATTGTTATTGA+TGG | 0.426567 | tig0006809:+52146 | Msa1344600:CDS |
| TTTCAGATCCATAAAAGTAT+TGG | 0.431591 | tig0006809:+53150 | Msa1344600:intron |
| TGTCGTAATATTCTTACATA+AGG | 0.431601 | tig0006809:-54996 | None:intergenic |
| TCCTGCTTGTAGTTCATTGG+AGG | 0.431662 | tig0006809:+51093 | Msa1344600:CDS |
| AACAGTGGAAGTGGGTGGTT+TGG | 0.432524 | tig0006809:+50934 | Msa1344600:CDS |
| ATTGGAGGGAAGTTTGGGTT+TGG | 0.433837 | tig0006809:+50994 | Msa1344600:CDS |
| CCAGAAACTACATTTGGCTC+TGG | 0.435258 | tig0006809:-52249 | None:intergenic |
| AGATAGATGTTGGGGTTTGG+AGG | 0.438785 | tig0006809:-50672 | None:intergenic |
| ATCTTTGTTTACACAAAGCA+TGG | 0.442882 | tig0006809:+54579 | Msa1344600:CDS |
| CTTCTCAATCACCATAAACT+TGG | 0.443356 | tig0006809:+53698 | Msa1344600:CDS |
| AATGGCTCTGAATTTGCAAT+GGG | 0.444315 | tig0006809:+54677 | Msa1344600:CDS |
| CAATATAGATAGATAGATGT+TGG | 0.446446 | tig0006809:-50682 | None:intergenic |
| ATTTGCTCAGTGATGCAATC+TGG | 0.453282 | tig0006809:-53731 | None:intergenic |
| AATATAGATAGATAGATGTT+GGG | 0.454142 | tig0006809:-50681 | None:intergenic |
| AATGGCTCTCCAATCAATTC+AGG | 0.456525 | tig0006809:+54845 | Msa1344600:CDS |
| GCGGATGCTTTGATGTTGTC+TGG | 0.457261 | tig0006809:+53575 | Msa1344600:CDS |
| GATAGATGTTGGGGTTTGGA+GGG | 0.462502 | tig0006809:-50671 | None:intergenic |
| ATCGTCAGTGAAAGCAAAGA+TGG | 0.468784 | tig0006809:-54643 | None:intergenic |
| GATTGGGCTGATATAAACTT+TGG | 0.469823 | tig0006809:+52887 | Msa1344600:CDS |
| GGCATCCACACCAAGTTTGT+TGG | 0.470716 | tig0006809:-54556 | None:intergenic |
| ATTGGAGGATCTAGAGAAGT+TGG | 0.472176 | tig0006809:+51108 | Msa1344600:CDS |
| GTTCAGCTTATGAAATCTAA+AGG | 0.476188 | tig0006809:+54759 | Msa1344600:CDS |
| GGTTAGAGCAACAGTGGAAG+TGG | 0.479470 | tig0006809:+50925 | Msa1344600:CDS |
| GTCCAAACATAAAACATTGA+CGG | 0.482651 | tig0006809:+50634 | Msa1344600:five_prime_UTR |
| GTTTCAAATCTTGGATTCAA+GGG | 0.484102 | tig0006809:+50884 | Msa1344600:CDS |
| ACAGTTCAAGCAAACTATCC+AGG | 0.485658 | tig0006809:+51969 | Msa1344600:CDS |
| TGTTTCAAATCTTGGATTCA+AGG | 0.486804 | tig0006809:+50883 | Msa1344600:CDS |
| TGAATTGATTGGAGAGCCAT+TGG | 0.486822 | tig0006809:-54843 | None:intergenic |
| CTTAGAATCCATTCATAACC+TGG | 0.490324 | tig0006809:+53186 | Msa1344600:CDS |
| AGTGGAAGTGGGTGGTTTGG+AGG | 0.491005 | tig0006809:+50937 | Msa1344600:CDS |
| CAAAGGAGATGTTGTTCTAG+TGG | 0.496328 | tig0006809:+54791 | Msa1344600:CDS |
| ATGCTTTGTGTAAACAAAGA+TGG | 0.496846 | tig0006809:-54577 | None:intergenic |
| GAAGATTAAGAAGCTTAATG+AGG | 0.499257 | tig0006809:+51204 | Msa1344600:CDS |
| AGAAGGAGAATTAATGGTGA+AGG | 0.504002 | tig0006809:+51027 | Msa1344600:CDS |
| GGATCTAGAGAAGTTGGCAT+TGG | 0.506649 | tig0006809:+51114 | Msa1344600:CDS |
| TGCAACTGTGCTGTTGAAAT+GGG | 0.507547 | tig0006809:+53755 | Msa1344600:CDS |
| GATTTAAAGAACTACCTCTC+TGG | 0.508547 | tig0006809:+52971 | Msa1344600:CDS |
| TTACACAAAGCATGGATACA+TGG | 0.512647 | tig0006809:+54587 | Msa1344600:CDS |
| TTGCACTAAACTTCACAACT+TGG | 0.513112 | tig0006809:+50702 | Msa1344600:five_prime_UTR |
| TATACCTTTGTTGATAGAGT+GGG | 0.513572 | tig0006809:-52308 | None:intergenic |
| ACAGAAAGCACTGGCAGTGT+TGG | 0.513689 | tig0006809:+53622 | Msa1344600:CDS |
| AAGCTTTCACTATTTCCTCC+AGG | 0.514751 | tig0006809:-53204 | None:intergenic |
| AGCTGAGAAGCTACAATCAC+TGG | 0.516804 | tig0006809:-53334 | None:intergenic |
| ACCTCGGCACGAGTTGGTGT+TGG | 0.517994 | tig0006809:-53379 | None:intergenic |
| TAGTTTGCTTGAACTGTGAA+TGG | 0.518961 | tig0006809:-51963 | None:intergenic |
| AAGAAGCAATGTTGCATTGG+AGG | 0.519750 | tig0006809:+50979 | Msa1344600:CDS |
| AAATGTAGTTTCTGGAGAGA+TGG | 0.520733 | tig0006809:+52257 | Msa1344600:CDS |
| GAAGGAGAATTAATGGTGAA+GGG | 0.521643 | tig0006809:+51028 | Msa1344600:CDS |
| GATCTAGAGAAGTTGGCATT+GGG | 0.523010 | tig0006809:+51115 | Msa1344600:CDS |
| CAGCATGGTTGACAAAGGAT+AGG | 0.523387 | tig0006809:-52937 | None:intergenic |
| GAAAGCTTCTGATGGAATCA+TGG | 0.526635 | tig0006809:+53219 | Msa1344600:CDS |
| GTAGAATGGAATCATGGAGT+AGG | 0.529105 | tig0006809:+53657 | Msa1344600:CDS |
| AAGAAGAAGCAATGTTGCAT+TGG | 0.529627 | tig0006809:+50976 | Msa1344600:CDS |
| TGATCATGGAGCACCTTCCT+CGG | 0.529749 | tig0006809:+51285 | Msa1344600:CDS |
| ATTATATCCTCCTGAACTGT+AGG | 0.532477 | tig0006809:-53286 | None:intergenic |
| GCCATTGGAGTTGAACGTGT+TGG | 0.532724 | tig0006809:-54828 | None:intergenic |
| GGTCGGTCGCACAACAAACT+GGG | 0.533830 | tig0006809:-50608 | None:intergenic |
| GAATGGCTCTGAATTTGCAA+TGG | 0.534437 | tig0006809:+54676 | Msa1344600:CDS |
| GGATATGACTAGCAGTAGAA+TGG | 0.541987 | tig0006809:+53643 | Msa1344600:CDS |
| CTGTCTGCAGCCAACAAACT+TGG | 0.543406 | tig0006809:+54546 | Msa1344600:intron |
| ATGGTAGCTCGAGGTGACCT+TGG | 0.545680 | tig0006809:+53238 | Msa1344600:CDS |
| ACCTCAACTTTAACCGAGGA+AGG | 0.546772 | tig0006809:-51298 | None:intergenic |
| GAAATAGTGAAAGCTTCTGA+TGG | 0.547302 | tig0006809:+53211 | Msa1344600:CDS |
| ACCTTCCTCGGTTAAAGTTG+AGG | 0.547363 | tig0006809:+51297 | Msa1344600:CDS |
| GATGAAATTGTTATTGATGG+TGG | 0.547715 | tig0006809:+52149 | Msa1344600:CDS |
| CAGAAACTACATTTGGCTCT+GGG | 0.549518 | tig0006809:-52248 | None:intergenic |
| TGTGTCATGGTACTAGAGAA+TGG | 0.550320 | tig0006809:+51164 | Msa1344600:CDS |
| GGTTTGGATATGGTTTCAGA+AGG | 0.551120 | tig0006809:+51010 | Msa1344600:CDS |
| TGTGTGCAGTCATGGGGTTG+TGG | 0.551745 | tig0006809:+53986 | Msa1344600:CDS |
| TCTGATAAATCAACAAGAAG+TGG | 0.551849 | tig0006809:-54708 | None:intergenic |
| CTAGCAGTAGAATGGAATCA+TGG | 0.554034 | tig0006809:+53651 | Msa1344600:CDS |
| TGATCGTCAGGTATTGAAGT+AGG | 0.554748 | tig0006809:+52125 | Msa1344600:intron |
| TGGGAGGAATGAATGTTGCT+AGG | 0.558127 | tig0006809:+51134 | Msa1344600:CDS |
| TGTTGTAAGTGCATAGATGC+TGG | 0.559663 | tig0006809:+52215 | Msa1344600:CDS |
| TCAAAACCATGGCCATGTTG+AGG | 0.561531 | tig0006809:-50784 | None:intergenic |
| AGCATGGTTGACAAAGGATA+GGG | 0.564531 | tig0006809:-52936 | None:intergenic |
| CGATGATTCAAATCAAGTGA+AGG | 0.566317 | tig0006809:-50860 | None:intergenic |
| ACTGTAGGAATTTGCTCAAG+TGG | 0.570822 | tig0006809:-53271 | None:intergenic |
| TATAGTTACAGGTGGCAAGA+AGG | 0.575987 | tig0006809:-53789 | None:intergenic |
| GATGATTCAAATCAAGTGAA+GGG | 0.576702 | tig0006809:-50859 | None:intergenic |
| TAGAATGGAATCATGGAGTA+GGG | 0.577518 | tig0006809:+53658 | Msa1344600:CDS |
| AATTGTTATTGATGGTGGAA+TGG | 0.581842 | tig0006809:+52154 | Msa1344600:CDS |
| ACAAAGCTTGTGTGTACTGT+TGG | 0.581960 | tig0006809:+51070 | Msa1344600:CDS |
| TGAAGCAGTTCGACAGTACG+CGG | 0.582389 | tig0006809:+53556 | Msa1344600:CDS |
| AGACCATTATCTAGAATGCA+TGG | 0.585129 | tig0006809:+54871 | Msa1344600:exon |
| AGAAGCAATGTTGCATTGGA+GGG | 0.585550 | tig0006809:+50980 | Msa1344600:CDS |
| TCTAAAGGATTGATCAACAA+AGG | 0.587186 | tig0006809:+54774 | Msa1344600:CDS |
| TCCAACACGTTCAACTCCAA+TGG | 0.588423 | tig0006809:+54827 | Msa1344600:CDS |
| AATCCTTAACAGAGTCAGCA+TGG | 0.588767 | tig0006809:-52952 | None:intergenic |
| ATATACCTTTGTTGATAGAG+TGG | 0.588891 | tig0006809:-52309 | None:intergenic |
| GGGAAAACAACATGTGGTCA+AGG | 0.589917 | tig0006809:+50904 | Msa1344600:CDS |
| TTCATTTGGACAGAAAGCAC+TGG | 0.597753 | tig0006809:+53613 | Msa1344600:CDS |
| TTTCCTCACAAGGCTTGAAG+CGG | 0.604105 | tig0006809:-50819 | None:intergenic |
| ATAAACTTTGGTATAGCTGA+GGG | 0.604872 | tig0006809:+52899 | Msa1344600:CDS |
| TATAAACTTTGGTATAGCTG+AGG | 0.608857 | tig0006809:+52898 | Msa1344600:CDS |
| AATGGAATCATGGAGTAGGG+AGG | 0.609034 | tig0006809:+53661 | Msa1344600:CDS |
| GCTGGCTGTGTGCAGTCATG+GGG | 0.609334 | tig0006809:+53980 | Msa1344600:CDS |
| TCGTCAGTGAAAGCAAAGAT+GGG | 0.611395 | tig0006809:-54642 | None:intergenic |
| CAAGTGGTATTTCGACTCCA+AGG | 0.615969 | tig0006809:-53255 | None:intergenic |
| TATTACCTCAACTTTAACCG+AGG | 0.617662 | tig0006809:-51302 | None:intergenic |
| ATATAGATAGATAGATGTTG+GGG | 0.621117 | tig0006809:-50680 | None:intergenic |
| TGCAGCCAACAAACTTGGTG+TGG | 0.621182 | tig0006809:+54551 | Msa1344600:intron |
| CTAGAGAAGTTGGCATTGGG+AGG | 0.622352 | tig0006809:+51118 | Msa1344600:CDS |
| TGACGATGAAAGTACTCGAA+TGG | 0.623409 | tig0006809:+54659 | Msa1344600:CDS |
| CATTGTTGACTTCAAAACCA+TGG | 0.623754 | tig0006809:-50795 | None:intergenic |
| ATTGGAAGTCCAGATGTGGC+TGG | 0.624953 | tig0006809:+53962 | Msa1344600:intron |
| GCAAATTCCTACAGTTCAGG+AGG | 0.625155 | tig0006809:+53279 | Msa1344600:CDS |
| TCCTCCAATGAACTACAAGC+AGG | 0.625603 | tig0006809:-51094 | None:intergenic |
| TCCAACACCAACTCGTGCCG+AGG | 0.625829 | tig0006809:+53378 | Msa1344600:CDS |
| GTTAGAGCAACAGTGGAAGT+GGG | 0.631991 | tig0006809:+50926 | Msa1344600:CDS |
| TGGCCGCTTCAAGCCTTGTG+AGG | 0.640093 | tig0006809:+50816 | Msa1344600:CDS |
| ATACCTTTGTTGATAGAGTG+GGG | 0.640435 | tig0006809:-52307 | None:intergenic |
| AGAGTCAGCATGGTTGACAA+AGG | 0.644631 | tig0006809:-52942 | None:intergenic |
| TCTGTTATGATTGATACTGA+AGG | 0.647107 | tig0006809:+51244 | Msa1344600:CDS |
| GGTCAAGGTTAGAGCAACAG+TGG | 0.660617 | tig0006809:+50919 | Msa1344600:CDS |
| GCTAGGCTTAACATGTGTCA+TGG | 0.662490 | tig0006809:+51151 | Msa1344600:CDS |
| AGAGCAACAGTGGAAGTGGG+TGG | 0.662646 | tig0006809:+50929 | Msa1344600:CDS |
| GAGATGGAAAGCTTGTCAGG+AGG | 0.673618 | tig0006809:+52273 | Msa1344600:CDS |
| GATGGAATCATGGTAGCTCG+AGG | 0.677993 | tig0006809:+53229 | Msa1344600:CDS |
| ATATACTGGATTTCCTCACA+AGG | 0.681444 | tig0006809:-50829 | None:intergenic |
| ATTCAAGGGAAAACAACATG+TGG | 0.684730 | tig0006809:+50898 | Msa1344600:CDS |
| TCAGTGAAAGCAAAGATGGG+AGG | 0.685783 | tig0006809:-54639 | None:intergenic |
| GCTCCCCACTCTATCAACAA+AGG | 0.690309 | tig0006809:+52304 | Msa1344600:CDS |
| GGTCGCACAACAAACTGGGG+AGG | 0.701968 | tig0006809:-50604 | None:intergenic |
| AGAATCCATTCATAACCTGG+AGG | 0.710102 | tig0006809:+53189 | Msa1344600:CDS |
| GTCGGTCGCACAACAAACTG+GGG | 0.718958 | tig0006809:-50607 | None:intergenic |
| ATGGCTCTGAATTTGCAATG+GGG | 0.789601 | tig0006809:+54678 | Msa1344600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATATCAAACA+GGG | - | tig0006809:52442-52461 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAATATCAAAC+AGG | - | tig0006809:52443-52462 | None:intergenic | 10.0% |
| !! | AATCTGAATTAAAATATAAT+CGG | - | tig0006809:53886-53905 | None:intergenic | 10.0% |
| !!! | TTTCATAAGTTTTCAAAAAA+CGG | - | tig0006809:51410-51429 | None:intergenic | 15.0% |
| !! | AAACTTATGAAAACATATTA+TGG | + | tig0006809:51418-51437 | Msa1344600:intron | 15.0% |
| !! | ATAATAACATGTATATTCAT+CGG | - | tig0006809:52057-52076 | None:intergenic | 15.0% |
| !! | AAAAAAAAAATATCAAACAG+GGG | - | tig0006809:52441-52460 | None:intergenic | 15.0% |
| !! | ATTACACTAAAATTGTAAAA+GGG | - | tig0006809:52658-52677 | None:intergenic | 15.0% |
| !! | AATTACACTAAAATTGTAAA+AGG | - | tig0006809:52659-52678 | None:intergenic | 15.0% |
| !!! | TGAACTTTTTTCTTTTTTTT+TGG | + | tig0006809:52784-52803 | Msa1344600:intron | 15.0% |
| !! | TTATAAGATAAAACATATCA+AGG | - | tig0006809:52855-52874 | None:intergenic | 15.0% |
| !! | TATCTTATAAATTTATCTAC+AGG | + | tig0006809:52865-52884 | Msa1344600:intron | 15.0% |
| !!! | AAAGACTTAAAAATTGATTT+TGG | + | tig0006809:54035-54054 | Msa1344600:CDS | 15.0% |
| !! | TAAGATAAATGATTTATGTT+TGG | - | tig0006809:54385-54404 | None:intergenic | 15.0% |
| !! | AATATAGATAGATAGATGTT+GGG | - | tig0006809:50684-50703 | None:intergenic | 20.0% |
| !! | ACTTATAATTAGCATATGTT+AGG | + | tig0006809:51330-51349 | Msa1344600:intron | 20.0% |
| !! | CTTATAATTAGCATATGTTA+GGG | + | tig0006809:51331-51350 | Msa1344600:intron | 20.0% |
| !! | GATAGCTTATGAAATTAATT+TGG | + | tig0006809:51483-51502 | Msa1344600:intron | 20.0% |
| !!! | ATAAGTTATTTCTACAACAA+GGG | - | tig0006809:51518-51537 | None:intergenic | 20.0% |
| !!! | AATAAGTTATTTCTACAACA+AGG | - | tig0006809:51519-51538 | None:intergenic | 20.0% |
| !!! | CATCTTATTTTTTTAAAGCT+CGG | - | tig0006809:51794-51813 | None:intergenic | 20.0% |
| !! | TTTGTGTTTGAATTTGAATT+GGG | + | tig0006809:51864-51883 | Msa1344600:intron | 20.0% |
| !! | AATTTAACTATCTTGACAAA+TGG | - | tig0006809:52512-52531 | None:intergenic | 20.0% |
| !! | AATTCTTTGAATAGTATTAG+TGG | + | tig0006809:52810-52829 | Msa1344600:intron | 20.0% |
| !! | TATAAATTTATCTACAGGAT+TGG | + | tig0006809:52870-52889 | Msa1344600:intron | 20.0% |
| !! | ATAAATTTATCTACAGGATT+GGG | + | tig0006809:52871-52890 | Msa1344600:intron | 20.0% |
| !! | AAACTGTATAAATGATTCTT+CGG | - | tig0006809:53028-53047 | None:intergenic | 20.0% |
| !!! | ATCAATATAATTTAGCCTTT+TGG | + | tig0006809:53048-53067 | Msa1344600:intron | 20.0% |
| !! | CACAAATTAAGAATGTTAAA+TGG | + | tig0006809:53124-53143 | Msa1344600:intron | 20.0% |
| !!! | TGTATAAATTGATTTTACCT+CGG | - | tig0006809:53398-53417 | None:intergenic | 20.0% |
| !! | GAAAACTTATTATCATAGAT+AGG | - | tig0006809:53452-53471 | None:intergenic | 20.0% |
| !! | AGTCTTTCAAAATTGAATTT+GGG | - | tig0006809:54022-54041 | None:intergenic | 20.0% |
| !! | AAGTCTTTCAAAATTGAATT+TGG | - | tig0006809:54023-54042 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTTGGTATGTT+TGG | + | tig0006809:54044-54063 | Msa1344600:intron | 20.0% |
| !!! | AAATTGATTTTGGTATGTTT+GGG | + | tig0006809:54045-54064 | Msa1344600:intron | 20.0% |
| !!! | CTTCAAATTAGAAAGAATTT+TGG | - | tig0006809:54099-54118 | None:intergenic | 20.0% |
| !! | CTTTGCTTCAAAAAAAAAAA+AGG | - | tig0006809:54300-54319 | None:intergenic | 20.0% |
| !! | AATGTTTTATGTTTGGACTT+TGG | - | tig0006809:50632-50651 | None:intergenic | 25.0% |
| ! | ATATAGATAGATAGATGTTG+GGG | - | tig0006809:50683-50702 | None:intergenic | 25.0% |
| ! | CAATATAGATAGATAGATGT+TGG | - | tig0006809:50685-50704 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCATATCTAT+CGG | + | tig0006809:51367-51386 | Msa1344600:intron | 25.0% |
| !! | ATAAGTTTTGCATCTAAACA+GGG | + | tig0006809:51818-51837 | Msa1344600:intron | 25.0% |
| ! | GTTTGTGTTTGAATTTGAAT+TGG | + | tig0006809:51863-51882 | Msa1344600:intron | 25.0% |
| ! | AATTTCAGGAAGATTCAATA+TGG | + | tig0006809:51907-51926 | Msa1344600:intron | 25.0% |
| ! | AAATTCAGAATTCACTTGAA+TGG | - | tig0006809:52099-52118 | None:intergenic | 25.0% |
| ! | ATTCAAGTGAATTCTGAATT+TGG | + | tig0006809:52098-52117 | Msa1344600:intron | 25.0% |
| !! | TTTGTTGTCATTGAAAAAAC+TGG | + | tig0006809:52182-52201 | Msa1344600:CDS | 25.0% |
| ! | TGATCTTAACTAAATAAGTG+CGG | - | tig0006809:52358-52377 | None:intergenic | 25.0% |
| ! | TTATTTAGTTAAGATCATGC+TGG | + | tig0006809:52361-52380 | Msa1344600:intron | 25.0% |
| !! | TTTCAGATCCATAAAAGTAT+TGG | + | tig0006809:53150-53169 | Msa1344600:intron | 25.0% |
| !! | TATCTTTGCCAATACTTTTA+TGG | - | tig0006809:53161-53180 | None:intergenic | 25.0% |
| !! | TAAGTTTTCTGTTTTCCTTT+TGG | + | tig0006809:53463-53482 | Msa1344600:intron | 25.0% |
| ! | AAGCGAAGATTTATTGTAAT+AGG | - | tig0006809:53509-53528 | None:intergenic | 25.0% |
| ! | CTATATTAGTGCATGTATAT+TGG | + | tig0006809:53807-53826 | Msa1344600:intron | 25.0% |
| ! | TACAGTTCAAATTTCATGTT+TGG | - | tig0006809:53934-53953 | None:intergenic | 25.0% |
| ! | TTGAACTGTATGATTGTAAT+TGG | + | tig0006809:53944-53963 | Msa1344600:intron | 25.0% |
| !! | CAAATTAGAAAGAATTTTGG+AGG | - | tig0006809:54096-54115 | None:intergenic | 25.0% |
| !! | TTTCTAATTTGAAGCAAAGA+GGG | + | tig0006809:54105-54124 | Msa1344600:intron | 25.0% |
| ! | GATTTATGTTTGGTTATGTT+CGG | - | tig0006809:54375-54394 | None:intergenic | 25.0% |
| !!! | ACGTGTTTTTGTATTTTGTT+TGG | + | tig0006809:54914-54933 | Msa1344600:three_prime_UTR | 25.0% |
| !!! | GTTTTTGTATTTTGTTTGGT+TGG | + | tig0006809:54918-54937 | Msa1344600:three_prime_UTR | 25.0% |
| ! | TTACATAAGGACAACAAAAT+AGG | - | tig0006809:54986-55005 | None:intergenic | 25.0% |
| ! | TGTCGTAATATTCTTACATA+AGG | - | tig0006809:54999-55018 | None:intergenic | 25.0% |
| ! | TTTTATGTTTGGACTTTGGT+CGG | - | tig0006809:50628-50647 | None:intergenic | 30.0% |
| GTCCAAACATAAAACATTGA+CGG | + | tig0006809:50634-50653 | Msa1344600:five_prime_UTR | 30.0% | |
| GATGATTCAAATCAAGTGAA+GGG | - | tig0006809:50862-50881 | None:intergenic | 30.0% | |
| AATCATCGTGTTTCAAATCT+TGG | + | tig0006809:50875-50894 | Msa1344600:CDS | 30.0% | |
| TGTTTCAAATCTTGGATTCA+AGG | + | tig0006809:50883-50902 | Msa1344600:CDS | 30.0% | |
| GTTTCAAATCTTGGATTCAA+GGG | + | tig0006809:50884-50903 | Msa1344600:CDS | 30.0% | |
| GAAGATTAAGAAGCTTAATG+AGG | + | tig0006809:51204-51223 | Msa1344600:CDS | 30.0% | |
| AAGAAGCTTAATGAGGAAAA+TGG | + | tig0006809:51211-51230 | Msa1344600:CDS | 30.0% | |
| TCTGTTATGATTGATACTGA+AGG | + | tig0006809:51244-51263 | Msa1344600:CDS | 30.0% | |
| AAGCTATCATAGAGAACTTA+TGG | - | tig0006809:51471-51490 | None:intergenic | 30.0% | |
| ! | GATAAGTTTTGCATCTAAAC+AGG | + | tig0006809:51817-51836 | Msa1344600:intron | 30.0% |
| CCTGAAATTGAAACAAGAAT+TGG | - | tig0006809:51896-51915 | None:intergenic | 30.0% | |
| ! | CCAATTCTTGTTTCAATTTC+AGG | + | tig0006809:51893-51912 | Msa1344600:intron | 30.0% |
| ! | TTTACTGCTGAACATTTTGT+GGG | + | tig0006809:51933-51952 | Msa1344600:CDS | 30.0% |
| ! | GGTGATGAAATTGTTATTGA+TGG | + | tig0006809:52146-52165 | Msa1344600:CDS | 30.0% |
| ! | GATGAAATTGTTATTGATGG+TGG | + | tig0006809:52149-52168 | Msa1344600:CDS | 30.0% |
| !! | AATTGTTATTGATGGTGGAA+TGG | + | tig0006809:52154-52173 | Msa1344600:CDS | 30.0% |
| ! | TATACCTTTGTTGATAGAGT+GGG | - | tig0006809:52311-52330 | None:intergenic | 30.0% |
| ! | ATATACCTTTGTTGATAGAG+TGG | - | tig0006809:52312-52331 | None:intergenic | 30.0% |
| GATCTTAACTAAATAAGTGC+GGG | - | tig0006809:52357-52376 | None:intergenic | 30.0% | |
| ! | AAAATATCAAACAGGGGTTT+TGG | - | tig0006809:52435-52454 | None:intergenic | 30.0% |
| AAAACTAGTCAAAACAAGTC+TGG | - | tig0006809:52551-52570 | None:intergenic | 30.0% | |
| ! | TTCTAAAGAGCATGAATTAC+TGG | + | tig0006809:52590-52609 | Msa1344600:intron | 30.0% |
| AACATTTACTCGGTAATTGA+AGG | - | tig0006809:52624-52643 | None:intergenic | 30.0% | |
| AAGACTTTGCAACATTTACT+CGG | - | tig0006809:52634-52653 | None:intergenic | 30.0% | |
| TATAAACTTTGGTATAGCTG+AGG | + | tig0006809:52898-52917 | Msa1344600:CDS | 30.0% | |
| ATAAACTTTGGTATAGCTGA+GGG | + | tig0006809:52899-52918 | Msa1344600:CDS | 30.0% | |
| !! | TCTTCGCTTTTATGCAATAA+AGG | + | tig0006809:53520-53539 | Msa1344600:CDS | 30.0% |
| ACATGCACTAATATAGTTAC+AGG | - | tig0006809:53803-53822 | None:intergenic | 30.0% | |
| TGCATGTATATTGGAGAATT+TGG | + | tig0006809:53816-53835 | Msa1344600:intron | 30.0% | |
| ! | CTTTCTAATTTGAAGCAAAG+AGG | + | tig0006809:54104-54123 | Msa1344600:intron | 30.0% |
| ! | TTCTAATTTGAAGCAAAGAG+GGG | + | tig0006809:54106-54125 | Msa1344600:intron | 30.0% |
| CAAAAAAAAAAAAGGCAACC+CGG | - | tig0006809:54292-54311 | None:intergenic | 30.0% | |
| !! | GTGTCTATTTGATTTTACTG+TGG | - | tig0006809:54467-54486 | None:intergenic | 30.0% |
| ATGCTTTGTGTAAACAAAGA+TGG | - | tig0006809:54580-54599 | None:intergenic | 30.0% | |
| ! | ATCTTTGTTTACACAAAGCA+TGG | + | tig0006809:54579-54598 | Msa1344600:CDS | 30.0% |
| TCTGATAAATCAACAAGAAG+TGG | - | tig0006809:54711-54730 | None:intergenic | 30.0% | |
| GTTCAGCTTATGAAATCTAA+AGG | + | tig0006809:54759-54778 | Msa1344600:CDS | 30.0% | |
| TCTAAAGGATTGATCAACAA+AGG | + | tig0006809:54774-54793 | Msa1344600:CDS | 30.0% | |
| !! | TTTGTATTTTGTTTGGTTGG+AGG | + | tig0006809:54921-54940 | Msa1344600:three_prime_UTR | 30.0% |
| ! | CTCCGTCAATGTTTTATGTT+TGG | - | tig0006809:50639-50658 | None:intergenic | 35.0% |
| TTGCACTAAACTTCACAACT+TGG | + | tig0006809:50702-50721 | Msa1344600:five_prime_UTR | 35.0% | |
| !! | CATTGTTGACTTCAAAACCA+TGG | - | tig0006809:50798-50817 | None:intergenic | 35.0% |
| !!! | CATGGTTTTGAAGTCAACAA+TGG | + | tig0006809:50796-50815 | Msa1344600:CDS | 35.0% |
| ATATACTGGATTTCCTCACA+AGG | - | tig0006809:50832-50851 | None:intergenic | 35.0% | |
| CGATGATTCAAATCAAGTGA+AGG | - | tig0006809:50863-50882 | None:intergenic | 35.0% | |
| ATTCAAGGGAAAACAACATG+TGG | + | tig0006809:50898-50917 | Msa1344600:CDS | 35.0% | |
| AAGAAGAAGCAATGTTGCAT+TGG | + | tig0006809:50976-50995 | Msa1344600:CDS | 35.0% | |
| GGTTTCAGAAGGAGAATTAA+TGG | + | tig0006809:51021-51040 | Msa1344600:CDS | 35.0% | |
| AGAAGGAGAATTAATGGTGA+AGG | + | tig0006809:51027-51046 | Msa1344600:CDS | 35.0% | |
| GAAGGAGAATTAATGGTGAA+GGG | + | tig0006809:51028-51047 | Msa1344600:CDS | 35.0% | |
| !! | TTAATGGTGAAGGGTTTTAG+AGG | + | tig0006809:51037-51056 | Msa1344600:CDS | 35.0% |
| !!! | TAATGGTGAAGGGTTTTAGA+GGG | + | tig0006809:51038-51057 | Msa1344600:CDS | 35.0% |
| AATGGCATCGTGATGTTATT+AGG | + | tig0006809:51182-51201 | Msa1344600:CDS | 35.0% | |
| CAGATTCATGTTGTTGATCA+TGG | + | tig0006809:51271-51290 | Msa1344600:CDS | 35.0% | |
| TATTACCTCAACTTTAACCG+AGG | - | tig0006809:51305-51324 | None:intergenic | 35.0% | |
| TCAAATAAGTCAATCCAGAG+AGG | - | tig0006809:51357-51376 | None:intergenic | 35.0% | |
| AAGCTGCAAATTAATCTCTC+AGG | + | tig0006809:51557-51576 | Msa1344600:intron | 35.0% | |
| AGCTGCAAATTAATCTCTCA+GGG | + | tig0006809:51558-51577 | Msa1344600:intron | 35.0% | |
| ! | GTTTACTGCTGAACATTTTG+TGG | + | tig0006809:51932-51951 | Msa1344600:CDS | 35.0% |
| !! | TAGTTTGCTTGAACTGTGAA+TGG | - | tig0006809:51966-51985 | None:intergenic | 35.0% |
| ! | AACTATCCAGGTTTTTCTGA+AGG | + | tig0006809:51981-52000 | Msa1344600:CDS | 35.0% |
| TTACTACCTTCAGAAAAACC+TGG | - | tig0006809:51990-52009 | None:intergenic | 35.0% | |
| GAATTTGGTTAATGATCGTC+AGG | + | tig0006809:52113-52132 | Msa1344600:intron | 35.0% | |
| ATCTCTCCAGAAACTACATT+TGG | - | tig0006809:52258-52277 | None:intergenic | 35.0% | |
| ! | AAATGTAGTTTCTGGAGAGA+TGG | + | tig0006809:52257-52276 | Msa1344600:CDS | 35.0% |
| ! | ATACCTTTGTTGATAGAGTG+GGG | - | tig0006809:52310-52329 | None:intergenic | 35.0% |
| ACTAAATAAGTGCGGGAAAA+AGG | - | tig0006809:52350-52369 | None:intergenic | 35.0% | |
| TCATATAGAAGTAACTGTCC+CGG | - | tig0006809:52400-52419 | None:intergenic | 35.0% | |
| ! | GTGTGCTATACTGATCATTT+TGG | - | tig0006809:52703-52722 | None:intergenic | 35.0% |
| GATTGGGCTGATATAAACTT+TGG | + | tig0006809:52887-52906 | Msa1344600:CDS | 35.0% | |
| GATTTAAAGAACTACCTCTC+TGG | + | tig0006809:52971-52990 | Msa1344600:CDS | 35.0% | |
| TCTGGAAAATCAACCAAGTA+AGG | + | tig0006809:52989-53008 | Msa1344600:intron | 35.0% | |
| ! | CATCTTTTCAAAGGACCAAA+AGG | - | tig0006809:53066-53085 | None:intergenic | 35.0% |
| ! | ACACATCAGCATCTTTTCAA+AGG | - | tig0006809:53075-53094 | None:intergenic | 35.0% |
| CTTAGAATCCATTCATAACC+TGG | + | tig0006809:53186-53205 | Msa1344600:CDS | 35.0% | |
| TATTTCCTCCAGGTTATGAA+TGG | - | tig0006809:53197-53216 | None:intergenic | 35.0% | |
| GAAATAGTGAAAGCTTCTGA+TGG | + | tig0006809:53211-53230 | Msa1344600:CDS | 35.0% | |
| ATTATATCCTCCTGAACTGT+AGG | - | tig0006809:53289-53308 | None:intergenic | 35.0% | |
| CTCTATGTTTATGATCATCG+TGG | - | tig0006809:53422-53441 | None:intergenic | 35.0% | |
| ACTAAGTTCAGCATTCCAAA+AGG | - | tig0006809:53481-53500 | None:intergenic | 35.0% | |
| TAGAATGGAATCATGGAGTA+GGG | + | tig0006809:53658-53677 | Msa1344600:CDS | 35.0% | |
| CTTCTCAATCACCATAAACT+TGG | + | tig0006809:53698-53717 | Msa1344600:CDS | 35.0% | |
| TGCACTAATATAGTTACAGG+TGG | - | tig0006809:53800-53819 | None:intergenic | 35.0% | |
| ! | TTTACCCTGTTTTACACAAG+AGG | - | tig0006809:54202-54221 | None:intergenic | 35.0% |
| ATGCAGATTTCATAGCAACA+AGG | - | tig0006809:54494-54513 | None:intergenic | 35.0% | |
| TTACACAAAGCATGGATACA+TGG | + | tig0006809:54587-54606 | Msa1344600:CDS | 35.0% | |
| !! | AATGGCTCTGAATTTGCAAT+GGG | + | tig0006809:54677-54696 | Msa1344600:CDS | 35.0% |
| ! | TGGTCTTAACCTGAATTGAT+TGG | - | tig0006809:54857-54876 | None:intergenic | 35.0% |
| ! | AGACCATTATCTAGAATGCA+TGG | + | tig0006809:54871-54890 | Msa1344600:exon | 35.0% |
| !! | TATTTTGTTTGGTTGGAGGT+AGG | + | tig0006809:54925-54944 | Msa1344600:three_prime_UTR | 35.0% |
| GATAGATAGATGTTGGGGTT+TGG | - | tig0006809:50678-50697 | None:intergenic | 40.0% | |
| GTGAGGAAATCCAGTATATC+TGG | + | tig0006809:50833-50852 | Msa1344600:CDS | 40.0% | |
| TGAAGGGTTTCCAGATATAC+TGG | - | tig0006809:50846-50865 | None:intergenic | 40.0% | |
| AAGAAGCAATGTTGCATTGG+AGG | + | tig0006809:50979-50998 | Msa1344600:CDS | 40.0% | |
| AGAAGCAATGTTGCATTGGA+GGG | + | tig0006809:50980-50999 | Msa1344600:CDS | 40.0% | |
| GGTTTGGATATGGTTTCAGA+AGG | + | tig0006809:51010-51029 | Msa1344600:CDS | 40.0% | |
| ACAAAGCTTGTGTGTACTGT+TGG | + | tig0006809:51070-51089 | Msa1344600:CDS | 40.0% | |
| ATTGGAGGATCTAGAGAAGT+TGG | + | tig0006809:51108-51127 | Msa1344600:CDS | 40.0% | |
| GATCTAGAGAAGTTGGCATT+GGG | + | tig0006809:51115-51134 | Msa1344600:CDS | 40.0% | |
| TGTGTCATGGTACTAGAGAA+TGG | + | tig0006809:51164-51183 | Msa1344600:CDS | 40.0% | |
| TAATCTCTCAGGGATTGACT+TGG | + | tig0006809:51568-51587 | Msa1344600:intron | 40.0% | |
| ACACAGGAATCATTGGTCAA+TGG | - | tig0006809:51651-51670 | None:intergenic | 40.0% | |
| TGACCAATGATTCCTGTGTT+AGG | + | tig0006809:51652-51671 | Msa1344600:intron | 40.0% | |
| GCCATAGCAAAGCTCTATAT+GGG | - | tig0006809:51682-51701 | None:intergenic | 40.0% | |
| AGCCATAGCAAAGCTCTATA+TGG | - | tig0006809:51683-51702 | None:intergenic | 40.0% | |
| !! | TCTCAGATTAGCCTGTCATT+GGG | + | tig0006809:51761-51780 | Msa1344600:intron | 40.0% |
| ! | AGGGCCTAATAGTTTGTGAT+AGG | + | tig0006809:51837-51856 | Msa1344600:intron | 40.0% |
| CCAGCCTATCACAAACTATT+AGG | - | tig0006809:51844-51863 | None:intergenic | 40.0% | |
| ! | CCTAATAGTTTGTGATAGGC+TGG | + | tig0006809:51841-51860 | Msa1344600:intron | 40.0% |
| ACAGTTCAAGCAAACTATCC+AGG | + | tig0006809:51969-51988 | Msa1344600:CDS | 40.0% | |
| !! | TGATCGTCAGGTATTGAAGT+AGG | + | tig0006809:52125-52144 | Msa1344600:intron | 40.0% |
| TGTTGTAAGTGCATAGATGC+TGG | + | tig0006809:52215-52234 | Msa1344600:CDS | 40.0% | |
| !! | CAGAAACTACATTTGGCTCT+GGG | - | tig0006809:52251-52270 | None:intergenic | 40.0% |
| ! | TGCTGGACCAATTTTTCATC+CGG | + | tig0006809:52378-52397 | Msa1344600:intron | 40.0% |
| AACTGTCCCGGATGAAAAAT+TGG | - | tig0006809:52388-52407 | None:intergenic | 40.0% | |
| AGCATGGTTGACAAAGGATA+GGG | - | tig0006809:52939-52958 | None:intergenic | 40.0% | |
| AATCCTTAACAGAGTCAGCA+TGG | - | tig0006809:52955-52974 | None:intergenic | 40.0% | |
| !! | ACTTGGTTGATTTTCCAGAG+AGG | - | tig0006809:52988-53007 | None:intergenic | 40.0% |
| TGAGTCTATGCTTCCTTACT+TGG | - | tig0006809:53005-53024 | None:intergenic | 40.0% | |
| AGAATCCATTCATAACCTGG+AGG | + | tig0006809:53189-53208 | Msa1344600:CDS | 40.0% | |
| AAGCTTTCACTATTTCCTCC+AGG | - | tig0006809:53207-53226 | None:intergenic | 40.0% | |
| GAAAGCTTCTGATGGAATCA+TGG | + | tig0006809:53219-53238 | Msa1344600:CDS | 40.0% | |
| ! | ACTGTAGGAATTTGCTCAAG+TGG | - | tig0006809:53274-53293 | None:intergenic | 40.0% |
| TGAGCAAATTCCTACAGTTC+AGG | + | tig0006809:53276-53295 | Msa1344600:CDS | 40.0% | |
| !! | GAGTCAGCTATTGGTTCATT+TGG | + | tig0006809:53599-53618 | Msa1344600:CDS | 40.0% |
| ! | TTCATTTGGACAGAAAGCAC+TGG | + | tig0006809:53613-53632 | Msa1344600:CDS | 40.0% |
| GGATATGACTAGCAGTAGAA+TGG | + | tig0006809:53643-53662 | Msa1344600:CDS | 40.0% | |
| CTAGCAGTAGAATGGAATCA+TGG | + | tig0006809:53651-53670 | Msa1344600:CDS | 40.0% | |
| GTAGAATGGAATCATGGAGT+AGG | + | tig0006809:53657-53676 | Msa1344600:CDS | 40.0% | |
| GCAATGATGCTCCAAGTTTA+TGG | - | tig0006809:53712-53731 | None:intergenic | 40.0% | |
| ATTTGCTCAGTGATGCAATC+TGG | - | tig0006809:53734-53753 | None:intergenic | 40.0% | |
| ! | ATGCAACTGTGCTGTTGAAA+TGG | + | tig0006809:53754-53773 | Msa1344600:CDS | 40.0% |
| ! | TGCAACTGTGCTGTTGAAAT+GGG | + | tig0006809:53755-53774 | Msa1344600:CDS | 40.0% |
| TATAGTTACAGGTGGCAAGA+AGG | - | tig0006809:53792-53811 | None:intergenic | 40.0% | |
| TGGAGAATTTGGATTGTGTG+CGG | + | tig0006809:53827-53846 | Msa1344600:intron | 40.0% | |
| ATAATCGGACAGTCTAGATG+TGG | - | tig0006809:53871-53890 | None:intergenic | 40.0% | |
| TGTAATTGGAAGTCCAGATG+TGG | + | tig0006809:53958-53977 | Msa1344600:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | + | tig0006809:54151-54170 | Msa1344600:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | tig0006809:54194-54213 | Msa1344600:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | tig0006809:54195-54214 | Msa1344600:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | tig0006809:54226-54245 | Msa1344600:intron | 40.0% | |
| TCGTCAGTGAAAGCAAAGAT+GGG | - | tig0006809:54645-54664 | None:intergenic | 40.0% | |
| ATCGTCAGTGAAAGCAAAGA+TGG | - | tig0006809:54646-54665 | None:intergenic | 40.0% | |
| !! | TGACGATGAAAGTACTCGAA+TGG | + | tig0006809:54659-54678 | Msa1344600:CDS | 40.0% |
| !! | GAATGGCTCTGAATTTGCAA+TGG | + | tig0006809:54676-54695 | Msa1344600:CDS | 40.0% |
| !! | ATGGCTCTGAATTTGCAATG+GGG | + | tig0006809:54678-54697 | Msa1344600:CDS | 40.0% |
| CAAAGGAGATGTTGTTCTAG+TGG | + | tig0006809:54791-54810 | Msa1344600:CDS | 40.0% | |
| TGAATTGATTGGAGAGCCAT+TGG | - | tig0006809:54846-54865 | None:intergenic | 40.0% | |
| AATGGCTCTCCAATCAATTC+AGG | + | tig0006809:54845-54864 | Msa1344600:CDS | 40.0% | |
| CAGCCATGCATTCTAGATAA+TGG | - | tig0006809:54877-54896 | None:intergenic | 40.0% | |
| GATAGATGTTGGGGTTTGGA+GGG | - | tig0006809:50674-50693 | None:intergenic | 45.0% | |
| AGATAGATGTTGGGGTTTGG+AGG | - | tig0006809:50675-50694 | None:intergenic | 45.0% | |
| TCCCAGCAAAAACCTCAACA+TGG | + | tig0006809:50772-50791 | Msa1344600:exon | 45.0% | |
| ! | GCCATGTTGAGGTTTTTGCT+GGG | - | tig0006809:50776-50795 | None:intergenic | 45.0% |
| CAAAAACCTCAACATGGCCA+TGG | + | tig0006809:50778-50797 | Msa1344600:exon | 45.0% | |
| TCAAAACCATGGCCATGTTG+AGG | - | tig0006809:50787-50806 | None:intergenic | 45.0% | |
| TTTCCTCACAAGGCTTGAAG+CGG | - | tig0006809:50822-50841 | None:intergenic | 45.0% | |
| GGGAAAACAACATGTGGTCA+AGG | + | tig0006809:50904-50923 | Msa1344600:CDS | 45.0% | |
| GTTAGAGCAACAGTGGAAGT+GGG | + | tig0006809:50926-50945 | Msa1344600:CDS | 45.0% | |
| TGTTGCATTGGAGGGAAGTT+TGG | + | tig0006809:50988-51007 | Msa1344600:CDS | 45.0% | |
| GTTGCATTGGAGGGAAGTTT+GGG | + | tig0006809:50989-51008 | Msa1344600:CDS | 45.0% | |
| ! | ATTGGAGGGAAGTTTGGGTT+TGG | + | tig0006809:50994-51013 | Msa1344600:CDS | 45.0% |
| ! | GGGAAGTTTGGGTTTGGATA+TGG | + | tig0006809:51000-51019 | Msa1344600:CDS | 45.0% |
| !!! | TGAAGGGTTTTAGAGGGTTG+AGG | + | tig0006809:51044-51063 | Msa1344600:CDS | 45.0% |
| TGGTCCTGCTTGTAGTTCAT+TGG | + | tig0006809:51090-51109 | Msa1344600:CDS | 45.0% | |
| TCCTGCTTGTAGTTCATTGG+AGG | + | tig0006809:51093-51112 | Msa1344600:CDS | 45.0% | |
| TCCTCCAATGAACTACAAGC+AGG | - | tig0006809:51097-51116 | None:intergenic | 45.0% | |
| GGATCTAGAGAAGTTGGCAT+TGG | + | tig0006809:51114-51133 | Msa1344600:CDS | 45.0% | |
| TGGGAGGAATGAATGTTGCT+AGG | + | tig0006809:51134-51153 | Msa1344600:CDS | 45.0% | |
| GCTAGGCTTAACATGTGTCA+TGG | + | tig0006809:51151-51170 | Msa1344600:CDS | 45.0% | |
| ACCTTCCTCGGTTAAAGTTG+AGG | + | tig0006809:51297-51316 | Msa1344600:CDS | 45.0% | |
| ACCTCAACTTTAACCGAGGA+AGG | - | tig0006809:51301-51320 | None:intergenic | 45.0% | |
| CAGGAATCATTGGTCAATGG+AGG | - | tig0006809:51648-51667 | None:intergenic | 45.0% | |
| TGGCCTAACACAGGAATCAT+TGG | - | tig0006809:51658-51677 | None:intergenic | 45.0% | |
| TAGCAAAGCTCTATATGGGC+TGG | - | tig0006809:51678-51697 | None:intergenic | 45.0% | |
| GCCCATATAGAGCTTTGCTA+TGG | + | tig0006809:51678-51697 | Msa1344600:intron | 45.0% | |
| AGAGACCAATACCACCACTA+GGG | - | tig0006809:51744-51763 | None:intergenic | 45.0% | |
| !! | CTCTCAGATTAGCCTGTCAT+TGG | + | tig0006809:51760-51779 | Msa1344600:intron | 45.0% |
| !! | AGATTAGCCTGTCATTGGGT+GGG | + | tig0006809:51765-51784 | Msa1344600:intron | 45.0% |
| ! | CCAGAAACTACATTTGGCTC+TGG | - | tig0006809:52252-52271 | None:intergenic | 45.0% |
| CCAGAGCCAAATGTAGTTTC+TGG | + | tig0006809:52249-52268 | Msa1344600:CDS | 45.0% | |
| ! | GCTGGACCAATTTTTCATCC+GGG | + | tig0006809:52379-52398 | Msa1344600:intron | 45.0% |
| CAGCATGGTTGACAAAGGAT+AGG | - | tig0006809:52940-52959 | None:intergenic | 45.0% | |
| AGAGTCAGCATGGTTGACAA+AGG | - | tig0006809:52945-52964 | None:intergenic | 45.0% | |
| !! | CAACCATGCTGACTCTGTTA+AGG | + | tig0006809:52949-52968 | Msa1344600:CDS | 45.0% |
| CAAGTGGTATTTCGACTCCA+AGG | - | tig0006809:53258-53277 | None:intergenic | 45.0% | |
| GCAAATTCCTACAGTTCAGG+AGG | + | tig0006809:53279-53298 | Msa1344600:CDS | 45.0% | |
| AGCTGAGAAGCTACAATCAC+TGG | - | tig0006809:53337-53356 | None:intergenic | 45.0% | |
| TTGTCTGGTGAGTCAGCTAT+TGG | + | tig0006809:53590-53609 | Msa1344600:CDS | 45.0% | |
| AATGGAATCATGGAGTAGGG+AGG | + | tig0006809:53661-53680 | Msa1344600:CDS | 45.0% | |
| CAACTTTATCAGTTGCGCCA+AGG | - | tig0006809:54135-54154 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | tig0006809:54191-54210 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | tig0006809:54222-54241 | Msa1344600:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | tig0006809:54225-54244 | Msa1344600:intron | 45.0% | |
| AAAGCAAAGATGGGAGGATC+TGG | - | tig0006809:54636-54655 | None:intergenic | 45.0% | |
| TCAGTGAAAGCAAAGATGGG+AGG | - | tig0006809:54642-54661 | None:intergenic | 45.0% | |
| TCCAACACGTTCAACTCCAA+TGG | + | tig0006809:54827-54846 | Msa1344600:CDS | 45.0% | |
| ! | GGCCATGTTGAGGTTTTTGC+TGG | - | tig0006809:50777-50796 | None:intergenic | 50.0% |
| GGTCAAGGTTAGAGCAACAG+TGG | + | tig0006809:50919-50938 | Msa1344600:CDS | 50.0% | |
| GGTTAGAGCAACAGTGGAAG+TGG | + | tig0006809:50925-50944 | Msa1344600:CDS | 50.0% | |
| AACAGTGGAAGTGGGTGGTT+TGG | + | tig0006809:50934-50953 | Msa1344600:CDS | 50.0% | |
| ! | CTAGAGAAGTTGGCATTGGG+AGG | + | tig0006809:51118-51137 | Msa1344600:CDS | 50.0% |
| ! | TGATCATGGAGCACCTTCCT+CGG | + | tig0006809:51285-51304 | Msa1344600:CDS | 50.0% |
| AGCATATGTTAGGGCCTCTC+TGG | + | tig0006809:51340-51359 | Msa1344600:intron | 50.0% | |
| !! | TCTCTCAGGGATTGACTTGG+TGG | + | tig0006809:51571-51590 | Msa1344600:intron | 50.0% |
| GTGGTGAAAGCTTGTGACCT+AGG | + | tig0006809:51590-51609 | Msa1344600:intron | 50.0% | |
| TTCGATCCTCAGACCTAGAG+AGG | - | tig0006809:51624-51643 | None:intergenic | 50.0% | |
| !! | TATATGGGCTGGCCTAACAC+AGG | - | tig0006809:51667-51686 | None:intergenic | 50.0% |
| GAGAGACCAATACCACCACT+AGG | - | tig0006809:51745-51764 | None:intergenic | 50.0% | |
| !! | CAGATTAGCCTGTCATTGGG+TGG | + | tig0006809:51764-51783 | Msa1344600:intron | 50.0% |
| GGAGAGATGGAAAGCTTGTC+AGG | + | tig0006809:52270-52289 | Msa1344600:CDS | 50.0% | |
| GAGATGGAAAGCTTGTCAGG+AGG | + | tig0006809:52273-52292 | Msa1344600:CDS | 50.0% | |
| GCTCCCCACTCTATCAACAA+AGG | + | tig0006809:52304-52323 | Msa1344600:CDS | 50.0% | |
| GATGGAATCATGGTAGCTCG+AGG | + | tig0006809:53229-53248 | Msa1344600:CDS | 50.0% | |
| ! | GATTTTACCTCGGCACGAGT+TGG | - | tig0006809:53388-53407 | None:intergenic | 50.0% |
| TGAAGCAGTTCGACAGTACG+CGG | + | tig0006809:53556-53575 | Msa1344600:CDS | 50.0% | |
| GCGGATGCTTTGATGTTGTC+TGG | + | tig0006809:53575-53594 | Msa1344600:CDS | 50.0% | |
| !! | ACAGAAAGCACTGGCAGTGT+TGG | + | tig0006809:53622-53641 | Msa1344600:CDS | 50.0% |
| ATTGGAAGTCCAGATGTGGC+TGG | + | tig0006809:53962-53981 | Msa1344600:intron | 50.0% | |
| GAAGCAAAGAGGGGTAACCT+TGG | + | tig0006809:54115-54134 | Msa1344600:intron | 50.0% | |
| AAGGTCACGAGTTCAAGTCC+TGG | + | tig0006809:54170-54189 | Msa1344600:intron | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | - | tig0006809:54265-54284 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | - | tig0006809:54266-54285 | None:intergenic | 50.0% | |
| !! | CAAGTTTGTTGGCTGCAGAC+AGG | - | tig0006809:54548-54567 | None:intergenic | 50.0% |
| CTGTCTGCAGCCAACAAACT+TGG | + | tig0006809:54546-54565 | Msa1344600:intron | 50.0% | |
| ! | TGCAGCCAACAAACTTGGTG+TGG | + | tig0006809:54551-54570 | Msa1344600:intron | 50.0% |
| GGCATCCACACCAAGTTTGT+TGG | - | tig0006809:54559-54578 | None:intergenic | 50.0% | |
| GCCATTGGAGTTGAACGTGT+TGG | - | tig0006809:54831-54850 | None:intergenic | 50.0% | |
| GTCGGTCGCACAACAAACTG+GGG | - | tig0006809:50610-50629 | None:intergenic | 55.0% | |
| GGTCGGTCGCACAACAAACT+GGG | - | tig0006809:50611-50630 | None:intergenic | 55.0% | |
| TGGTCGGTCGCACAACAAAC+TGG | - | tig0006809:50612-50631 | None:intergenic | 55.0% | |
| AGAGCAACAGTGGAAGTGGG+TGG | + | tig0006809:50929-50948 | Msa1344600:CDS | 55.0% | |
| ! | AGTGGAAGTGGGTGGTTTGG+AGG | + | tig0006809:50937-50956 | Msa1344600:CDS | 55.0% |
| ! | CTAGAGAGGAGCACACTCCT+AGG | - | tig0006809:51610-51629 | None:intergenic | 55.0% |
| ! | CTAGGAGTGTGCTCCTCTCT+AGG | + | tig0006809:51608-51627 | Msa1344600:intron | 55.0% |
| TGTGCTCCTCTCTAGGTCTG+AGG | + | tig0006809:51615-51634 | Msa1344600:intron | 55.0% | |
| CAATACCACCACTAGGGTGG+AGG | - | tig0006809:51738-51757 | None:intergenic | 55.0% | |
| CTCCACCCTAGTGGTGGTAT+TGG | + | tig0006809:51736-51755 | Msa1344600:intron | 55.0% | |
| GACCAATACCACCACTAGGG+TGG | - | tig0006809:51741-51760 | None:intergenic | 55.0% | |
| TCGGTATCCCACCCAATGAC+AGG | - | tig0006809:51775-51794 | None:intergenic | 55.0% | |
| ATGGTAGCTCGAGGTGACCT+TGG | + | tig0006809:53238-53257 | Msa1344600:CDS | 55.0% | |
| TGTGTGCAGTCATGGGGTTG+TGG | + | tig0006809:53986-54005 | Msa1344600:CDS | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | tig0006809:54270-54289 | Msa1344600:intron | 55.0% |
| TGGCTGCAGACAGGCACAAA+AGG | - | tig0006809:54539-54558 | None:intergenic | 55.0% | |
| GGTCGCACAACAAACTGGGG+AGG | - | tig0006809:50607-50626 | None:intergenic | 60.0% | |
| ! | TGGCCGCTTCAAGCCTTGTG+AGG | + | tig0006809:50816-50835 | Msa1344600:CDS | 60.0% |
| ACCACCACTAGGGTGGAGGT+GGG | - | tig0006809:51734-51753 | None:intergenic | 60.0% | |
| TACCACCACTAGGGTGGAGG+TGG | - | tig0006809:51735-51754 | None:intergenic | 60.0% | |
| TCCAACACCAACTCGTGCCG+AGG | + | tig0006809:53378-53397 | Msa1344600:CDS | 60.0% | |
| !! | ACCTCGGCACGAGTTGGTGT+TGG | - | tig0006809:53382-53401 | None:intergenic | 60.0% |
| TGCACACAGCCAGCCACATC+TGG | - | tig0006809:53974-53993 | None:intergenic | 60.0% | |
| ! | TGGCTGGCTGTGTGCAGTCA+TGG | + | tig0006809:53978-53997 | Msa1344600:CDS | 60.0% |
| ! | GGCTGGCTGTGTGCAGTCAT+GGG | + | tig0006809:53979-53998 | Msa1344600:CDS | 60.0% |
| GCTGGCTGTGTGCAGTCATG+GGG | + | tig0006809:53980-53999 | Msa1344600:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | tig0006809:54238-54257 | Msa1344600:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | tig0006809:54253-54272 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | tig0006809:54254-54273 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | tig0006809:54253-54272 | Msa1344600:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | tig0006809:54254-54273 | Msa1344600:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | tig0006809:54271-54290 | Msa1344600:intron | 60.0% |
| ! | TGGGGGTGTGTGTGTGGGAG+GGG | - | tig0006809:51715-51734 | None:intergenic | 65.0% |
| ! | GTGGGGGTGTGTGTGTGGGA+GGG | - | tig0006809:51716-51735 | None:intergenic | 65.0% |
| ! | GGAGGTGGGGGTGTGTGTGT+GGG | - | tig0006809:51720-51739 | None:intergenic | 65.0% |
| ! | TGGAGGTGGGGGTGTGTGTG+TGG | - | tig0006809:51721-51740 | None:intergenic | 65.0% |
| CACCACTAGGGTGGAGGTGG+GGG | - | tig0006809:51732-51751 | None:intergenic | 65.0% | |
| CCACCACTAGGGTGGAGGTG+GGG | - | tig0006809:51733-51752 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | tig0006809:54240-54259 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | tig0006809:54255-54274 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | tig0006809:54259-54278 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | tig0006809:54260-54279 | None:intergenic | 65.0% | |
| GGGGTGTGTGTGTGGGAGGG+GGG | - | tig0006809:51713-51732 | None:intergenic | 70.0% | |
| ! | GGGGGTGTGTGTGTGGGAGG+GGG | - | tig0006809:51714-51733 | None:intergenic | 70.0% |
| ! | GGTGGGGGTGTGTGTGTGGG+AGG | - | tig0006809:51717-51736 | None:intergenic | 70.0% |
| CACCCCCACCTCCACCCTAG+TGG | + | tig0006809:51727-51746 | Msa1344600:intron | 70.0% | |
| CCCCACCTCCACCCTAGTGG+TGG | + | tig0006809:51730-51749 | Msa1344600:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006809 | gene | 50583 | 55075 | 50583 | ID=Msa1344600;Name=Msa1344600 |
| tig0006809 | mRNA | 50583 | 55075 | 50583 | ID=Msa1344600-mRNA-1;Parent=Msa1344600;Name=Msa1344600-mRNA-1;_AED=0.17;_eAED=0.17;_QI=208|0.57|0.75|1|1|1|8|191|627 |
| tig0006809 | exon | 50583 | 51318 | 50583 | ID=Msa1344600-mRNA-1:exon:4606;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 51915 | 52002 | 51915 | ID=Msa1344600-mRNA-1:exon:4607;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 52135 | 52325 | 52135 | ID=Msa1344600-mRNA-1:exon:4608;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 52887 | 53005 | 52887 | ID=Msa1344600-mRNA-1:exon:4609;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 53156 | 53399 | 53156 | ID=Msa1344600-mRNA-1:exon:4610;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 53500 | 53802 | 53500 | ID=Msa1344600-mRNA-1:exon:4611;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 53975 | 54056 | 53975 | ID=Msa1344600-mRNA-1:exon:4612;Parent=Msa1344600-mRNA-1 |
| tig0006809 | exon | 54556 | 55075 | 54556 | ID=Msa1344600-mRNA-1:exon:4613;Parent=Msa1344600-mRNA-1 |
| tig0006809 | five_prime_UTR | 50583 | 50790 | 50583 | ID=Msa1344600-mRNA-1:five_prime_utr;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 50791 | 51318 | 50791 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 51915 | 52002 | 51915 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 52135 | 52325 | 52135 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 52887 | 53005 | 52887 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 53156 | 53399 | 53156 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 53500 | 53802 | 53500 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 53975 | 54056 | 53975 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | CDS | 54556 | 54884 | 54556 | ID=Msa1344600-mRNA-1:cds;Parent=Msa1344600-mRNA-1 |
| tig0006809 | three_prime_UTR | 54885 | 55075 | 54885 | ID=Msa1344600-mRNA-1:three_prime_utr;Parent=Msa1344600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
