AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1348450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348450 MtrunA17_Chr3g0139021 82.040 451 31 4 1 451 1 401 0.0 666
Msa1348450 MtrunA17_Chr1g0147881 61.635 159 51 5 279 432 178 331 7.99e-57 191
Msa1348450 MtrunA17_Chr1g0147881 43.192 213 84 9 1 179 1 210 3.33e-29 117
Msa1348450 MtrunA17_Chr4g0071521 62.143 140 43 4 281 419 174 304 7.80e-52 177
Msa1348450 MtrunA17_Chr4g0071521 33.178 214 89 8 1 179 1 195 3.04e-13 70.5
Msa1348450 MtrunA17_Chr7g0228941 92.593 81 5 1 339 419 31 110 5.03e-48 160
Msa1348450 MtrunA17_Chr4g0053281 58.871 124 49 1 296 417 200 323 4.13e-42 152
Msa1348450 MtrunA17_Chr5g0401821 59.483 116 46 1 303 417 141 256 4.75e-40 144
Msa1348450 MtrunA17_Chr1g0184691 62.500 80 30 0 338 417 271 350 2.45e-31 123
Msa1348450 MtrunA17_Chr2g0293481 48.454 97 45 2 326 417 228 324 5.27e-24 104
Msa1348450 MtrunA17_Chr2g0284321 52.439 82 38 1 337 417 11 92 8.68e-24 99.0
Msa1348450 MtrunA17_Chr2g0319961 49.462 93 31 2 336 417 50 137 5.31e-23 97.8
Msa1348450 MtrunA17_Chr7g0248691 43.396 106 49 3 312 417 117 211 2.51e-22 97.4
Msa1348450 MtrunA17_Chr8g0379461 40.952 105 55 2 320 417 29 133 2.60e-21 92.8
Msa1348450 MtrunA17_Chr2g0289181 56.250 64 28 0 354 417 8 71 3.02e-21 92.4
Msa1348450 MtrunA17_Chr8g0348311 50.000 80 39 1 338 417 134 212 1.64e-20 92.4
Msa1348450 MtrunA17_Chr7g0270051 43.023 86 40 1 341 417 25 110 1.79e-20 90.9
Msa1348450 MtrunA17_Chr8g0387501 58.333 60 25 0 360 419 129 188 3.31e-18 84.3
Msa1348450 MtrunA17_Chr5g0418781 44.706 85 46 1 336 420 100 183 4.85e-18 84.0
Msa1348450 MtrunA17_Chr2g0288871 48.649 74 38 0 344 417 289 362 1.74e-17 85.1
Msa1348450 MtrunA17_Chr7g0238921 37.615 109 53 3 339 436 106 210 2.13e-17 82.8
Msa1348450 MtrunA17_Chr1g0202461 43.373 83 46 1 336 417 236 318 2.62e-17 83.6
Msa1348450 MtrunA17_Chr8g0383351 51.613 62 29 1 356 417 156 216 3.09e-17 80.9
Msa1348450 MtrunA17_Chr1g0194481 40.217 92 54 1 326 417 124 214 5.02e-17 82.0
Msa1348450 MtrunA17_Chr3g0099641 45.946 74 40 0 344 417 235 308 6.09e-17 82.8
Msa1348450 MtrunA17_Chr2g0322391 47.297 74 39 0 344 417 333 406 6.53e-17 83.2
Msa1348450 MtrunA17_Chr3g0129361 51.613 62 29 1 356 417 140 200 7.99e-17 79.3
Msa1348450 MtrunA17_Chr5g0443131 47.222 72 37 1 347 418 144 214 9.20e-17 80.9
Msa1348450 MtrunA17_Chr4g0075201 47.297 74 39 0 344 417 251 324 1.02e-16 82.4
Msa1348450 MtrunA17_Chr8g0335811 44.706 85 43 3 336 417 127 210 1.07e-16 79.0
Msa1348450 MtrunA17_Chr7g0270191 38.614 101 60 2 317 417 103 201 1.07e-16 80.5
Msa1348450 MtrunA17_Chr7g0270831 45.946 74 40 0 344 417 200 273 2.02e-16 81.3
Msa1348450 MtrunA17_Chr5g0445311 47.297 74 38 1 344 417 348 420 3.68e-16 80.9
Msa1348450 MtrunA17_Chr4g0051881 45.070 71 38 1 347 417 165 234 3.72e-16 79.3
Msa1348450 MtrunA17_Chr1g0150281 52.632 57 27 0 361 417 141 197 4.15e-16 78.6
Msa1348450 MtrunA17_Chr3g0101131 43.678 87 42 2 344 424 399 484 5.21e-16 80.5
Msa1348450 MtrunA17_Chr5g0432161 48.052 77 39 1 341 417 402 477 5.48e-16 80.5
Msa1348450 MtrunA17_Chr3g0106491 47.436 78 40 1 340 417 345 421 7.68e-16 79.7
Msa1348450 MtrunA17_Chr7g0263531 52.239 67 31 1 352 418 353 418 8.38e-16 79.3
Msa1348450 MtrunA17_Chr7g0263531 45.122 82 38 4 356 436 184 259 7.35e-13 70.1
Msa1348450 MtrunA17_Chr2g0294231 45.333 75 40 1 343 417 186 259 1.41e-15 78.2
Msa1348450 MtrunA17_Chr7g0216891 48.101 79 33 2 341 417 204 276 1.57e-15 79.0
Msa1348450 MtrunA17_Chr4g0060271 47.368 76 36 3 344 417 239 312 1.67e-15 79.0
Msa1348450 MtrunA17_Chr4g0001361 45.455 77 38 1 358 434 160 232 1.93e-15 77.0
Msa1348450 MtrunA17_Chr2g0333851 36.047 86 43 1 344 417 141 226 1.95e-15 77.0
Msa1348450 MtrunA17_Chr1g0150801 43.662 71 39 1 347 417 89 158 2.22e-15 73.6
Msa1348450 MtrunA17_Chr7g0218081 53.226 62 28 1 356 417 406 466 2.84e-15 77.8
Msa1348450 MtrunA17_Chr7g0218081 46.053 76 38 3 357 431 224 297 1.41e-13 72.8
Msa1348450 MtrunA17_Chr3g0136961 45.455 66 34 1 361 426 139 202 3.33e-15 75.9
Msa1348450 MtrunA17_Chr3g0079691 39.604 101 55 2 322 417 452 551 3.39e-15 78.2
Msa1348450 MtrunA17_Chr3g0079691 47.368 57 28 2 361 417 281 335 2.50e-11 65.9
Msa1348450 MtrunA17_Chr8g0387981 40.816 98 46 3 336 422 100 196 3.66e-15 76.6
Msa1348450 MtrunA17_Chr1g0150271 51.667 60 29 0 358 417 99 158 4.00e-15 75.1
Msa1348450 MtrunA17_Chr4g0074001 55.000 60 26 1 358 417 357 415 4.60e-15 77.4
Msa1348450 MtrunA17_Chr4g0051181 46.667 75 36 1 343 417 230 300 5.10e-15 77.0
Msa1348450 MtrunA17_Chr4g0068541 44.595 74 40 1 344 417 192 264 9.42e-15 75.9
Msa1348450 MtrunA17_Chr7g0249311 35.821 134 60 5 318 431 330 457 9.93e-15 76.6
Msa1348450 MtrunA17_Chr7g0249311 43.939 66 35 2 356 421 175 238 6.40e-11 64.7
Msa1348450 MtrunA17_Chr6g0485431 28.571 210 124 9 222 417 14 211 1.17e-14 75.1
Msa1348450 MtrunA17_Chr2g0302391 41.333 75 44 0 344 418 195 269 1.40e-14 75.5
Msa1348450 MtrunA17_Chr1g0189391 41.584 101 46 4 329 417 55 154 1.41e-14 74.7
Msa1348450 MtrunA17_Chr5g0418191 50.000 62 30 1 356 417 316 376 1.66e-14 75.1
Msa1348450 MtrunA17_Chr5g0418191 47.761 67 32 3 352 417 142 206 1.52e-11 66.2
Msa1348450 MtrunA17_Chr4g0004911 42.857 77 43 1 341 417 317 392 2.01e-14 75.1
Msa1348450 MtrunA17_Chr7g0249301 46.154 78 38 2 343 417 272 348 6.60e-14 73.2
Msa1348450 MtrunA17_Chr7g0249301 49.123 57 27 2 361 417 63 117 5.31e-11 64.3
Msa1348450 MtrunA17_Chr4g0042831 48.387 62 31 1 356 417 274 334 9.64e-14 72.8
Msa1348450 MtrunA17_Chr7g0275531 42.553 94 46 5 336 424 92 182 1.15e-13 72.0
Msa1348450 MtrunA17_Chr3g0126391 52.632 57 25 1 361 415 134 190 5.37e-13 70.1
Msa1348450 MtrunA17_Chr1g0188941 40.260 77 45 1 341 417 32 107 5.42e-13 65.5
Msa1348450 MtrunA17_Chr7g0243891 32.143 140 83 3 278 417 303 430 6.26e-13 70.9
Msa1348450 MtrunA17_Chr7g0224801 45.161 62 33 1 356 417 89 149 1.42e-12 65.9
Msa1348450 MtrunA17_Chr3g0129321 41.935 62 35 1 357 418 115 175 3.12e-12 65.5
Msa1348450 MtrunA17_Chr8g0383251 44.262 61 33 1 357 417 105 164 3.23e-12 65.1
Msa1348450 MtrunA17_Chr4g0025051 45.614 57 31 0 361 417 336 392 6.76e-12 67.4
Msa1348450 MtrunA17_Chr5g0447701 43.662 71 39 1 347 417 239 308 7.15e-12 67.0
Msa1348450 MtrunA17_Chr4g0025061 40.580 69 40 1 350 417 349 417 1.83e-11 66.2
Msa1348450 MtrunA17_Chr8g0347251 49.123 57 27 1 361 415 137 193 6.19e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1348450 AT4G31550.2 63.690 168 52 4 272 434 152 315 3.28e-63 207
Msa1348450 AT4G31550.2 39.512 205 82 6 1 179 1 189 4.26e-30 119
Msa1348450 AT4G31550.1 63.314 169 52 5 272 434 152 316 1.89e-61 203
Msa1348450 AT4G31550.1 39.512 205 82 6 1 179 1 189 4.01e-30 119
Msa1348450 AT2G24570.1 58.084 167 57 6 278 436 154 315 5.13e-53 181
Msa1348450 AT2G24570.1 37.705 244 118 11 1 219 1 235 2.13e-23 100
Msa1348450 AT4G24240.1 51.923 156 58 5 267 417 195 338 2.30e-42 153
Msa1348450 AT4G31550.3 64.912 114 35 3 272 380 152 265 8.68e-38 139
Msa1348450 AT4G31550.3 39.512 205 82 6 1 179 1 189 2.08e-30 119
Msa1348450 AT2G30590.1 58.879 107 41 2 321 424 271 377 5.92e-37 139
Msa1348450 AT2G23320.1 54.867 113 46 3 309 417 186 297 1.03e-36 137
Msa1348450 AT3G04670.1 45.238 168 74 5 254 420 172 322 3.02e-36 136
Msa1348450 AT5G28650.1 41.237 194 96 6 231 420 143 322 5.51e-36 135
Msa1348450 AT4G24240.2 50.420 119 42 5 267 380 195 301 3.61e-24 102
Msa1348450 AT3G58710.2 49.462 93 31 2 336 417 40 127 3.65e-23 99.0
Msa1348450 AT2G34830.1 50.575 87 38 2 336 417 186 272 3.76e-23 101
Msa1348450 AT2G34830.2 50.575 87 38 2 336 417 195 281 5.04e-23 101
Msa1348450 AT1G29280.1 61.017 59 23 0 359 417 73 131 7.71e-23 97.8
Msa1348450 AT4G01250.1 44.898 98 49 1 320 417 93 185 1.19e-22 98.2
Msa1348450 AT1G30650.1 46.392 97 47 2 326 417 178 274 1.51e-22 100
Msa1348450 AT3G58710.1 48.387 93 32 2 336 417 41 128 1.98e-22 97.1
Msa1348450 AT5G45050.1 33.503 197 110 8 225 417 1058 1237 7.22e-21 96.7
Msa1348450 AT5G45050.4 33.503 197 110 8 225 417 919 1098 7.37e-21 96.7
Msa1348450 AT5G45050.2 33.503 197 110 8 225 417 1030 1209 7.58e-21 96.7
Msa1348450 AT5G52830.1 51.220 82 36 2 336 417 145 222 7.59e-21 94.0
Msa1348450 AT3G04670.2 43.182 132 57 5 254 384 172 286 7.47e-20 90.1
Msa1348450 AT2G23320.2 53.947 76 30 3 309 380 186 260 1.81e-18 85.5
Msa1348450 AT1G29860.1 37.607 117 70 2 303 417 77 192 2.27e-18 85.5
Msa1348450 AT4G39410.1 46.988 83 40 2 338 417 198 279 4.25e-18 85.1
Msa1348450 AT1G69310.4 45.349 86 45 2 336 420 122 206 9.42e-18 84.0
Msa1348450 AT1G69310.2 45.349 86 45 2 336 420 122 206 9.42e-18 84.0
Msa1348450 AT1G69310.1 45.349 86 45 2 336 420 122 206 9.42e-18 84.0
Msa1348450 AT4G04450.2 42.553 94 54 0 324 417 162 255 1.75e-17 84.7
Msa1348450 AT4G18170.1 41.053 95 50 2 323 417 140 228 1.76e-17 83.6
Msa1348450 AT2G47260.1 40.217 92 54 1 326 417 140 230 2.39e-17 83.6
Msa1348450 AT5G07100.1 37.143 105 64 2 315 418 188 291 3.74e-17 82.4
Msa1348450 AT4G04450.1 42.553 94 54 0 324 417 256 349 4.55e-17 84.0
Msa1348450 AT5G26170.1 41.333 75 43 1 347 421 100 173 4.87e-17 79.0
Msa1348450 AT4G23550.1 51.613 62 30 0 357 418 137 198 7.44e-17 81.6
Msa1348450 AT1G62300.1 47.297 74 39 0 344 417 296 369 1.18e-16 82.8
Msa1348450 AT2G44745.1 44.048 84 43 3 337 417 119 201 1.23e-16 79.0
Msa1348450 AT5G07100.2 37.143 105 64 2 315 418 95 198 1.35e-16 79.0
Msa1348450 AT5G07100.4 37.143 105 64 2 315 418 95 198 1.35e-16 79.0
Msa1348450 AT5G07100.5 37.143 105 64 2 315 418 95 198 1.35e-16 79.0
Msa1348450 AT5G07100.3 37.143 105 64 2 315 418 95 198 1.35e-16 79.0
Msa1348450 AT4G22070.4 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa1348450 AT4G22070.3 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa1348450 AT4G22070.2 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa1348450 AT4G22070.1 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa1348450 AT5G49520.1 45.946 74 39 1 344 417 205 277 1.65e-16 81.6
Msa1348450 AT2G37260.3 45.882 85 43 2 338 420 245 328 2.41e-16 80.5
Msa1348450 AT4G31800.2 37.615 109 64 2 346 452 97 203 2.52e-16 79.0
Msa1348450 AT2G37260.2 45.882 85 43 2 338 420 243 326 2.54e-16 80.5
Msa1348450 AT2G37260.1 53.846 65 29 1 356 420 345 408 3.02e-16 80.9
Msa1348450 AT5G46350.1 46.479 71 37 1 347 417 170 239 3.62e-16 79.7
Msa1348450 AT5G15130.2 43.434 99 42 4 321 417 156 242 3.63e-16 81.3
Msa1348450 AT5G15130.1 43.434 99 42 4 321 417 198 284 4.27e-16 80.9
Msa1348450 AT4G31800.1 37.615 109 64 2 346 452 162 268 6.46e-16 79.0
Msa1348450 AT4G26640.5 47.297 74 38 1 344 417 189 261 1.56e-15 78.6
Msa1348450 AT4G26640.6 47.297 74 38 1 344 417 189 261 1.56e-15 78.6
Msa1348450 AT4G26640.4 47.297 74 38 1 344 417 189 261 1.56e-15 78.6
Msa1348450 AT4G26640.3 47.297 74 38 1 344 417 189 261 1.56e-15 78.6
Msa1348450 AT4G26640.1 47.297 74 38 1 344 417 293 365 1.73e-15 79.0
Msa1348450 AT4G26640.7 47.297 74 38 1 344 417 325 397 1.74e-15 79.0
Msa1348450 AT4G26640.2 47.297 74 38 1 344 417 365 437 1.81e-15 79.0
Msa1348450 AT4G01720.1 47.297 74 39 0 344 417 223 296 2.58e-15 78.6
Msa1348450 AT2G04880.2 46.479 71 37 1 347 417 270 339 2.87e-15 78.2
Msa1348450 AT2G04880.1 46.479 71 37 1 347 417 294 363 3.47e-15 78.2
Msa1348450 AT2G38470.1 45.946 74 39 1 344 417 346 418 5.29e-15 77.4
Msa1348450 AT1G64000.1 49.180 61 30 1 357 417 111 170 5.36e-15 73.9
Msa1348450 AT1G66550.2 38.281 128 66 4 290 415 44 160 5.93e-15 75.1
Msa1348450 AT5G41570.1 41.250 80 46 1 338 417 76 154 6.13e-15 73.2
Msa1348450 AT2G03340.1 46.479 71 37 1 347 417 402 471 6.41e-15 77.4
Msa1348450 AT2G03340.1 46.032 63 31 3 356 417 245 305 7.21e-11 64.7
Msa1348450 AT3G01080.2 51.613 62 29 1 356 417 340 400 7.77e-15 77.0
Msa1348450 AT3G01080.2 43.529 85 45 3 357 440 201 283 8.63e-14 73.6
Msa1348450 AT2G40740.1 44.048 84 43 3 336 415 147 230 1.02e-14 75.1
Msa1348450 AT1G13960.1 46.479 71 37 1 347 417 396 465 1.04e-14 76.6
Msa1348450 AT3G01080.1 51.613 62 29 1 356 417 302 362 1.22e-14 75.9
Msa1348450 AT3G01080.1 43.529 85 45 3 357 440 163 245 1.29e-13 72.8
Msa1348450 AT2G40740.3 44.048 84 43 3 336 415 156 239 1.58e-14 74.7
Msa1348450 AT1G13960.2 46.479 71 37 1 347 417 243 312 2.06e-14 74.7
Msa1348450 AT5G56270.1 45.455 77 41 1 341 417 468 543 2.68e-14 75.9
Msa1348450 AT3G01080.3 43.529 85 45 3 357 440 201 283 2.85e-14 73.9
Msa1348450 AT1G68150.1 45.333 75 37 1 343 417 222 292 3.15e-14 74.3
Msa1348450 AT1G18860.1 52.632 57 27 0 361 417 240 296 3.35e-14 75.1
Msa1348450 AT4G30935.1 51.667 60 28 1 358 417 329 387 4.41e-14 74.7
Msa1348450 AT4G26440.1 41.237 97 51 2 341 437 353 443 4.61e-14 74.7
Msa1348450 AT4G26440.1 46.667 60 29 3 359 417 176 233 7.95e-11 64.7
Msa1348450 AT3G62340.1 42.500 80 45 1 338 417 96 174 4.97e-14 72.8
Msa1348450 AT2G25000.2 47.368 57 30 0 361 417 104 160 6.76e-14 71.2
Msa1348450 AT2G25000.4 47.368 57 30 0 361 417 104 160 6.76e-14 71.2
Msa1348450 AT2G25000.3 47.368 57 30 0 361 417 126 182 1.12e-13 71.2
Msa1348450 AT2G25000.1 47.368 57 30 0 361 417 147 203 1.84e-13 70.9
Msa1348450 AT5G64810.1 39.474 76 45 1 347 422 97 171 3.30e-13 68.6
Msa1348450 AT1G66550.1 38.043 92 47 2 334 415 74 165 3.52e-13 69.7
Msa1348450 AT5G45260.1 32.692 156 89 7 274 417 1116 1267 3.72e-13 72.4
Msa1348450 AT1G69310.3 41.860 86 44 3 336 420 122 202 3.74e-13 70.1
Msa1348450 AT1G80840.1 41.667 60 35 0 358 417 144 203 6.01e-13 69.7
Msa1348450 AT5G43290.1 42.857 77 40 2 342 418 99 171 2.66e-12 67.4
Msa1348450 AT1G66560.1 50.847 59 27 1 359 415 102 160 2.79e-12 67.0
Msa1348450 AT2G46130.1 45.161 62 33 1 356 417 26 86 4.19e-12 63.2
Msa1348450 AT1G80590.1 44.304 79 37 2 361 437 86 159 5.46e-12 65.9
Msa1348450 AT1G55600.1 38.961 77 46 1 341 417 288 363 6.23e-12 67.8
Msa1348450 AT2G21900.1 45.614 57 30 1 361 417 110 165 8.50e-12 64.7
Msa1348450 AT1G69810.1 36.364 99 53 5 344 439 187 278 9.62e-12 67.0
Msa1348450 AT1G69810.2 36.364 99 53 5 344 439 129 220 9.88e-12 66.2
Msa1348450 AT2G30250.1 41.096 73 40 2 345 417 315 384 2.79e-11 65.5
Msa1348450 AT3G01970.1 33.036 112 74 1 306 417 11 121 5.79e-11 60.8
Msa1348450 AT5G13080.1 31.897 116 73 3 307 417 9 123 8.47e-11 60.5

Find 165 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTAGATCTAAGGATTT+AGG 0.160577 tig0010468:-26722 None:intergenic
GGATTTAGGGTTAGATTTAA+AGG 0.234283 tig0010468:-26708 None:intergenic
AGGGAGTGGGAGCATGGATT+TGG 0.234912 tig0010468:+28003 Msa1348450:CDS
GGGAGTGGGAGCATGGATTT+GGG 0.237711 tig0010468:+28004 Msa1348450:CDS
TACGTTACAACTAGTATATT+TGG 0.242016 tig0010468:-27908 None:intergenic
CTTGGGGATTTCTAGATCTA+AGG 0.245293 tig0010468:-26729 None:intergenic
GAAAATGACTTTGAGATTGA+TGG 0.268812 tig0010468:+26337 None:intergenic
AATAATTCTGGTTCAGGTTC+AGG 0.270724 tig0010468:+27983 Msa1348450:CDS
GTATGGCTCCAAACCGATTA+AGG 0.275343 tig0010468:+27701 Msa1348450:CDS
TTTATTTCAGGGGTTATTAT+AGG 0.286785 tig0010468:+27828 Msa1348450:intron
TTTCTAGATCTAAGGATTTA+GGG 0.294531 tig0010468:-26721 None:intergenic
AAAGGTTGGTTATGGCTCTT+AGG 0.300408 tig0010468:-26659 None:intergenic
GGATGTGGTGTTCCCTTAAT+CGG 0.308127 tig0010468:-27714 None:intergenic
TTAGTAAAATCGAGAGTTAA+AGG 0.311607 tig0010468:-26677 None:intergenic
CAGAATTATTCTCTTGCATT+GGG 0.323224 tig0010468:-27970 None:intergenic
CAAGAGAATAATTCTGGTTC+AGG 0.324630 tig0010468:+27977 Msa1348450:CDS
AATCACTCCGGCGATGTCTC+TGG 0.334104 tig0010468:+27292 Msa1348450:CDS
GTTTGTGGCAGCGGTTGATC+AGG 0.340156 tig0010468:-26575 None:intergenic
GGAAGCGAGCGTGGCCTTTA+CGG 0.340610 tig0010468:-26532 None:intergenic
GCCGGTGTAATGGCCGGTGA+TGG 0.353361 tig0010468:-27044 None:intergenic
ACCCTCACCCCTGCTGTCTC+TGG 0.371044 tig0010468:+27223 Msa1348450:CDS
GGAAAACTAAATGTTTCCTT+GGG 0.371745 tig0010468:-26746 None:intergenic
CCAATGCAAGAGAATAATTC+TGG 0.372712 tig0010468:+27971 Msa1348450:CDS
CTGAGTAGAGGTGGAGGGAG+TGG 0.376016 tig0010468:-26600 None:intergenic
TGGAAAACTAAATGTTTCCT+TGG 0.386222 tig0010468:-26747 None:intergenic
GAGTATTCATGGAGGAAGTA+TGG 0.388070 tig0010468:+27684 Msa1348450:CDS
GGTTGATCAGGGGTTGCATT+TGG 0.390158 tig0010468:-26563 None:intergenic
CCGGTGTAATGGCCGGTGAT+GGG 0.391889 tig0010468:-27043 None:intergenic
CGAGAGTTAAAGGTTGGTTA+TGG 0.401114 tig0010468:-26667 None:intergenic
TGTTTACCACGGGAGATAGA+AGG 0.401450 tig0010468:-27115 None:intergenic
TGAAGTGGTGGTGGTGGAGG+TGG 0.402228 tig0010468:-26623 None:intergenic
AAAATTGTCCAGCTAGGAAA+AGG 0.409042 tig0010468:+27864 Msa1348450:CDS
TGGTGTTCCCTTAATCGGTT+TGG 0.409958 tig0010468:-27709 None:intergenic
CCAGAATTATTCTCTTGCAT+TGG 0.415510 tig0010468:-27971 None:intergenic
GGGTTAGATTTAAAGGTGTA+AGG 0.415786 tig0010468:-26701 None:intergenic
ATTTGAAGTGGTGGTGGTGG+AGG 0.418020 tig0010468:-26626 None:intergenic
GGGGTGTTTGAGCTAACCTT+AGG 0.419189 tig0010468:+28025 Msa1348450:CDS
GGAGTGGGAGCATGGATTTG+GGG 0.422889 tig0010468:+28005 Msa1348450:CDS
CGGTGTAATGGCCGGTGATG+GGG 0.429599 tig0010468:-27042 None:intergenic
TGGAGGTGGCTGAGTAGAGG+TGG 0.430349 tig0010468:-26609 None:intergenic
TACCAGCAGATGAGTATTCA+TGG 0.434617 tig0010468:+27673 Msa1348450:CDS
GTGGAGGGAGTGGAAGTTTG+TGG 0.440856 tig0010468:-26590 None:intergenic
CACTGGCTTCGCCGGTGTAA+TGG 0.443886 tig0010468:-27054 None:intergenic
GAGATAGAAGGGGTGAGGAG+TGG 0.448554 tig0010468:-27103 None:intergenic
AACACTGCCGTCGCCGGTGA+TGG 0.454613 tig0010468:-26786 None:intergenic
TAAAATCGAGAGTTAAAGGT+TGG 0.454643 tig0010468:-26673 None:intergenic
AGAGACATTATTAGCGAAGT+TGG 0.457022 tig0010468:-26432 None:intergenic
GAAGGGGTGAGGAGTGGAGA+TGG 0.464492 tig0010468:-27097 None:intergenic
AGGTGGCTGAGTAGAGGTGG+AGG 0.473021 tig0010468:-26606 None:intergenic
GAGTGGGAGCATGGATTTGG+GGG 0.475482 tig0010468:+28006 Msa1348450:CDS
AAAGATGAGTAAGATGTAAG+AGG 0.475709 tig0010468:-27139 None:intergenic
CTCCATGAATACTCATCTGC+TGG 0.476195 tig0010468:-27675 None:intergenic
AGAAATGCCACTGCCAGAAA+AGG 0.476227 tig0010468:+27332 Msa1348450:CDS
CTTGTTCTAATTCCCTCCTA+AGG 0.478049 tig0010468:-28041 None:intergenic
ATCACTCCGGCGATGTCTCT+GGG 0.478282 tig0010468:+27293 Msa1348450:CDS
TGTTTACCACGGGAGACAGC+GGG 0.481273 tig0010468:-26986 None:intergenic
AACGCTTCTATCGCCGGTGA+TGG 0.481498 tig0010468:-27173 None:intergenic
CAGGGGTTGCATTTGGATTG+CGG 0.482525 tig0010468:-26556 None:intergenic
GAGTCCCGTGCATAAGTTCA+AGG 0.483185 tig0010468:+27640 Msa1348450:CDS
TTCAATGACGGCGATGAAAG+AGG 0.483268 tig0010468:-27256 None:intergenic
ATAATTCTGGTTCAGGTTCA+GGG 0.485370 tig0010468:+27984 Msa1348450:CDS
CGCCGGTGATGGCGGAGGAT+AGG 0.488781 tig0010468:-26775 None:intergenic
TTGGGGCTTGATTATGAAGC+TGG 0.489027 tig0010468:-27952 None:intergenic
TATGGCTCCAAACCGATTAA+GGG 0.491967 tig0010468:+27702 Msa1348450:CDS
GGTGTAATGGCCGGTGATGG+GGG 0.493480 tig0010468:-27041 None:intergenic
GGTTTACCGCTGGAGACAGC+AGG 0.494929 tig0010468:-26845 None:intergenic
AGTGTTTCCAATGGCAGACT+TGG 0.497101 tig0010468:+26803 Msa1348450:CDS
TGGTGGAGGTGGCTGAGTAG+AGG 0.497676 tig0010468:-26612 None:intergenic
CTGGTTCAGGTTCAGGGAGT+GGG 0.498298 tig0010468:+27990 Msa1348450:CDS
GCCTTTACGGTGGAGTAAGT+TGG 0.499407 tig0010468:-26519 None:intergenic
AGTGTCTCCAATGGCAGGCT+AGG 0.503100 tig0010468:+26932 Msa1348450:CDS
AGATGGACCAAGTCTGCCAT+TGG 0.504301 tig0010468:-26810 None:intergenic
ATTGGAAACACTGGCTTCGC+CGG 0.506348 tig0010468:-27062 None:intergenic
AGCTAGGAAAAGGGTGGAGA+AGG 0.508533 tig0010468:+27874 Msa1348450:CDS
TGAATTTGAAGTGGTGGTGG+TGG 0.508665 tig0010468:-26629 None:intergenic
GTGGTAGATGGCATTGGACA+TGG 0.509221 tig0010468:-26956 None:intergenic
TCTGGTTCAGGTTCAGGGAG+TGG 0.509914 tig0010468:+27989 Msa1348450:CDS
GTGTTTGAGCTAACCTTAGG+AGG 0.513166 tig0010468:+28028 Msa1348450:CDS
GATGACATGAATGATGAGTT+AGG 0.513463 tig0010468:-26878 None:intergenic
ATAGAAGCGTTTCCAGCGGC+AGG 0.515749 tig0010468:+27185 Msa1348450:CDS
GGCTTCGCCGGTGTAATGGC+CGG 0.516112 tig0010468:-27050 None:intergenic
TTTGTGGCAGCGGTTGATCA+GGG 0.520203 tig0010468:-26574 None:intergenic
ACATGGACCTAGCCTGCCAT+TGG 0.522173 tig0010468:-26939 None:intergenic
AGGTTCAGGGAGTGGGAGCA+TGG 0.522327 tig0010468:+27997 Msa1348450:CDS
AGATGGACCGATCCTGCCGC+TGG 0.527015 tig0010468:-27197 None:intergenic
CACCAGAGACAGCAGGGGTG+AGG 0.529492 tig0010468:-27225 None:intergenic
GCCGTCGCCGGTGATGGCGG+AGG 0.529845 tig0010468:-26780 None:intergenic
GGAGTGGAAGTTTGTGGCAG+CGG 0.530182 tig0010468:-26584 None:intergenic
TTCATGTCCTCCGCCATCAC+CGG 0.530650 tig0010468:+27160 Msa1348450:CDS
ATTGGAAACACTGCCGTCGC+CGG 0.530836 tig0010468:-26792 None:intergenic
ACGGCAGTGTCTCCAATGGC+AGG 0.531858 tig0010468:+26927 Msa1348450:CDS
GCTGGAAACGCTTCTATCGC+CGG 0.535199 tig0010468:-27179 None:intergenic
ATCATCAGTCACCTTGGATG+TGG 0.536621 tig0010468:-27729 None:intergenic
AGCGTTTCCAGCGGCAGGAT+CGG 0.536745 tig0010468:+27190 Msa1348450:CDS
CTCCTATCCTCCGCCATCAC+CGG 0.540008 tig0010468:+26773 Msa1348450:CDS
ATGGCGGAGGATAGGAGTGA+TGG 0.540988 tig0010468:-26767 None:intergenic
ACCAGAGACAGCAGGGGTGA+GGG 0.543631 tig0010468:-27224 None:intergenic
TGAAAGAGGTGGTTTACCGC+TGG 0.544509 tig0010468:-26855 None:intergenic
CCCATCACCGGCCATTACAC+CGG 0.545382 tig0010468:+27043 Msa1348450:CDS
GTTTACCACGGGAGATAGAA+GGG 0.547446 tig0010468:-27114 None:intergenic
TCTATCGCCGGTGATGGCGG+AGG 0.548144 tig0010468:-27167 None:intergenic
ATTGGAGACACTGCCGTCGC+CGG 0.548673 tig0010468:-26921 None:intergenic
AGATGGTACTAGTCTGCCAT+TGG 0.550295 tig0010468:-27080 None:intergenic
GGTGGCTGAGTAGAGGTGGA+GGG 0.555049 tig0010468:-26605 None:intergenic
AATGATGAGTTAGGTGAAAG+AGG 0.558263 tig0010468:-26869 None:intergenic
GATTGCGGCGGAAGCGAGCG+TGG 0.558913 tig0010468:-26541 None:intergenic
GGAGGAATTTGAATTTGAAG+TGG 0.561033 tig0010468:-26638 None:intergenic
ACTGCCGTCGCCGGTGATGG+CGG 0.561235 tig0010468:-26783 None:intergenic
GTTTACCGCTGGAGACAGCA+GGG 0.565068 tig0010468:-26844 None:intergenic
GGTTTACCACCAGAGACAGC+AGG 0.565359 tig0010468:-27232 None:intergenic
GGAATTTGAATTTGAAGTGG+TGG 0.567821 tig0010468:-26635 None:intergenic
TCCTCCGCCATCACCGGCGA+CGG 0.570163 tig0010468:+26779 Msa1348450:CDS
ATTTGAATTTGAAGTGGTGG+TGG 0.570309 tig0010468:-26632 None:intergenic
GCTTCTATCGCCGGTGATGG+CGG 0.573163 tig0010468:-27170 None:intergenic
GCCGGTGATATCGCGAGCAA+AGG 0.576295 tig0010468:-26903 None:intergenic
CACGGGAGATAGAAGGGGTG+AGG 0.577389 tig0010468:-27108 None:intergenic
GGTTGGTTATGGCTCTTAGG+AGG 0.578662 tig0010468:-26656 None:intergenic
AAATTGTCCAGCTAGGAAAA+GGG 0.578813 tig0010468:+27865 Msa1348450:CDS
CTGTTTACCACGGGAGACAG+CGG 0.579258 tig0010468:-26987 None:intergenic
TCCAACTTACTCCACCGTAA+AGG 0.584686 tig0010468:+26518 Msa1348450:CDS
TAGTCTGCCATTGGAAACAC+TGG 0.587119 tig0010468:-27071 None:intergenic
GTAAGTTGGATAGTTTCTTG+AGG 0.588388 tig0010468:-26505 None:intergenic
AGCGAGCGTGGCCTTTACGG+TGG 0.596751 tig0010468:-26529 None:intergenic
TTGTGGCAGCGGTTGATCAG+GGG 0.597446 tig0010468:-26573 None:intergenic
CTCACCCCTGCTGTCTCTGG+TGG 0.599307 tig0010468:+27226 Msa1348450:CDS
GCAGGGGTGAGGGTATAAGA+TGG 0.600551 tig0010468:-27214 None:intergenic
CAATCCTTGAACTTATGCAC+GGG 0.601760 tig0010468:-27644 None:intergenic
GCCTTTGCTCGCGATATCAC+CGG 0.603472 tig0010468:+26902 Msa1348450:CDS
AATGGTGAGATAGAAGAAAG+AGG 0.604400 tig0010468:-27010 None:intergenic
GAGGTCTGAAACAGTGATGT+TGG 0.604494 tig0010468:-26486 None:intergenic
GCAGTGGCATTTCTTAGATG+CGG 0.605629 tig0010468:-27323 None:intergenic
AGAAAGAGGCTGTTTACCAC+GGG 0.608993 tig0010468:-26996 None:intergenic
CTCACCCCTGCTGTCTCCAG+CGG 0.609509 tig0010468:+26839 Msa1348450:CDS
GCAGGGGTGAGAATTTGAGA+TGG 0.611517 tig0010468:-26827 None:intergenic
GGCGAAGCCAGTGTTTCCAA+TGG 0.611891 tig0010468:+27064 Msa1348450:CDS
TTTACCACGGGAGACAGCGG+GGG 0.612657 tig0010468:-26984 None:intergenic
GCTCGCGATATCACCGGCGA+CGG 0.612885 tig0010468:+26908 Msa1348450:CDS
GTGGCATTTCTTAGATGCGG+AGG 0.615532 tig0010468:-27320 None:intergenic
GTTTACCACCAGAGACAGCA+GGG 0.616141 tig0010468:-27231 None:intergenic
TGTAAGAGGCTGTTTACCAC+GGG 0.617465 tig0010468:-27125 None:intergenic
GGCGACGGCAGTGTCTCCAA+TGG 0.618204 tig0010468:+26923 Msa1348450:CDS
AGAATTATTCTCTTGCATTG+GGG 0.619176 tig0010468:-27969 None:intergenic
GTTTACCACGGGAGACAGCG+GGG 0.620522 tig0010468:-26985 None:intergenic
GAAAACTAAATGTTTCCTTG+GGG 0.621149 tig0010468:-26745 None:intergenic
GCAATCCTTGAACTTATGCA+CGG 0.621816 tig0010468:-27645 None:intergenic
AAGAAAGAGGCTGTTTACCA+CGG 0.623906 tig0010468:-26997 None:intergenic
ATATTAGAAACTGCCACACA+AGG 0.629159 tig0010468:+26395 Msa1348450:CDS
TTAAGGGAACACCACATCCA+AGG 0.631610 tig0010468:+27718 Msa1348450:CDS
TGTTTGAGCTAACCTTAGGA+GGG 0.631673 tig0010468:+28029 Msa1348450:CDS
ATGTAAGAGGCTGTTTACCA+CGG 0.635354 tig0010468:-27126 None:intergenic
GGCGACGGCAGTGTTTCCAA+TGG 0.643275 tig0010468:+26794 Msa1348450:CDS
CTCACCCCTTCTATCTCCCG+TGG 0.644664 tig0010468:+27109 Msa1348450:CDS
GATGAGTTAGGTGAAAGAGG+TGG 0.645788 tig0010468:-26866 None:intergenic
AAAAGCTGTCACAATCACTC+CGG 0.649448 tig0010468:+27280 Msa1348450:CDS
TTGTCCAGCTAGGAAAAGGG+TGG 0.652692 tig0010468:+27868 Msa1348450:CDS
GGCGATAGAAGCGTTTCCAG+CGG 0.654727 tig0010468:+27181 Msa1348450:CDS
AAGTGAGTTTAAGCCTTGTG+TGG 0.663342 tig0010468:-26408 None:intergenic
CTTAGATCTAGAAATCCCCA+AGG 0.682048 tig0010468:+26730 Msa1348450:CDS
GGGTTGCATTTGGATTGCGG+CGG 0.683767 tig0010468:-26553 None:intergenic
AATGACGGCGATGAAAGAGG+CGG 0.684940 tig0010468:-27253 None:intergenic
TTTACCACGGGAGATAGAAG+GGG 0.691554 tig0010468:-27113 None:intergenic
GGGCTTGATTATGAAGCTGG+TGG 0.693764 tig0010468:-27949 None:intergenic
TTTACCGCTGGAGACAGCAG+GGG 0.716826 tig0010468:-26843 None:intergenic
TTTACCACCAGAGACAGCAG+GGG 0.764702 tig0010468:-27230 None:intergenic
CAGCAGATGAGTATTCATGG+AGG 0.765821 tig0010468:+27676 Msa1348450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTGATTTTATTTTTTTT+AGG + tig0010468:27592-27611 Msa1348450:intron 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG + tig0010468:27601-27620 Msa1348450:intron 10.0%
!!! GTTTTGATTTTATTTTTTTT+AGG + tig0010468:27592-27611 Msa1348450:intron 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG + tig0010468:27601-27620 Msa1348450:intron 10.0%
!!! TAAATTAATTTTACCTTTTC+TGG - tig0010468:27348-27367 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG - tig0010468:27506-27525 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG + tig0010468:27768-27787 Msa1348450:intron 15.0%
!!! TAAATTAATTTTACCTTTTC+TGG - tig0010468:27348-27367 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG - tig0010468:27506-27525 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG + tig0010468:27768-27787 Msa1348450:intron 15.0%
!! AAATGACAAATAAAATATGC+GGG - tig0010468:27505-27524 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG - tig0010468:27765-27784 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG + tig0010468:27816-27835 Msa1348450:intron 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG + tig0010468:27817-27836 Msa1348450:intron 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG + tig0010468:27818-27837 Msa1348450:intron 20.0%
!! AAATGACAAATAAAATATGC+GGG - tig0010468:27505-27524 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG - tig0010468:27765-27784 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG + tig0010468:27816-27835 Msa1348450:intron 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG + tig0010468:27817-27836 Msa1348450:intron 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG + tig0010468:27818-27837 Msa1348450:intron 20.0%
! TTAGTAAAATCGAGAGTTAA+AGG - tig0010468:26680-26699 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG - tig0010468:26724-26743 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG - tig0010468:26725-26744 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAA+TGG + tig0010468:27379-27398 Msa1348450:intron 25.0%
! AATGACAAATAAAATATGCG+GGG - tig0010468:27504-27523 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG + tig0010468:27782-27801 Msa1348450:intron 25.0%
! TTTATTTCAGGGGTTATTAT+AGG + tig0010468:27828-27847 Msa1348450:intron 25.0%
! TACGTTACAACTAGTATATT+TGG - tig0010468:27911-27930 None:intergenic 25.0%
! TTAGTAAAATCGAGAGTTAA+AGG - tig0010468:26680-26699 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG - tig0010468:26724-26743 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG - tig0010468:26725-26744 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAA+TGG + tig0010468:27379-27398 Msa1348450:intron 25.0%
! AATGACAAATAAAATATGCG+GGG - tig0010468:27504-27523 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG + tig0010468:27782-27801 Msa1348450:intron 25.0%
! TTTATTTCAGGGGTTATTAT+AGG + tig0010468:27828-27847 Msa1348450:intron 25.0%
! TACGTTACAACTAGTATATT+TGG - tig0010468:27911-27930 None:intergenic 25.0%
!!! ATTGATGGATTTTCCAAACA+TGG + tig0010468:26352-26371 Msa1348450:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG - tig0010468:26676-26695 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG - tig0010468:26711-26730 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG - tig0010468:26748-26767 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG - tig0010468:26749-26768 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG - tig0010468:26750-26769 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG - tig0010468:27142-27161 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG + tig0010468:27607-27626 Msa1348450:intron 30.0%
!! GCCGTTGATTTATTTGAATA+TGG + tig0010468:27761-27780 Msa1348450:intron 30.0%
AGAATTATTCTCTTGCATTG+GGG - tig0010468:27972-27991 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG - tig0010468:27973-27992 None:intergenic 30.0%
!!! ATTGATGGATTTTCCAAACA+TGG + tig0010468:26352-26371 Msa1348450:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG - tig0010468:26676-26695 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG - tig0010468:26711-26730 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG - tig0010468:26748-26767 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG - tig0010468:26749-26768 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG - tig0010468:26750-26769 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG - tig0010468:27142-27161 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG + tig0010468:27607-27626 Msa1348450:intron 30.0%
!! GCCGTTGATTTATTTGAATA+TGG + tig0010468:27761-27780 Msa1348450:intron 30.0%
AGAATTATTCTCTTGCATTG+GGG - tig0010468:27972-27991 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG - tig0010468:27973-27992 None:intergenic 30.0%
! TCTTTTTCCTCATCCATGTT+TGG - tig0010468:26368-26387 None:intergenic 35.0%
CATGGATGAGGAAAAAGAAA+AGG + tig0010468:26370-26389 Msa1348450:CDS 35.0%
ATATTAGAAACTGCCACACA+AGG + tig0010468:26395-26414 Msa1348450:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG - tig0010468:26435-26454 None:intergenic 35.0%
!!! AGTTCAGTGTTTTGAAGAGA+GGG - tig0010468:26464-26483 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG - tig0010468:26508-26527 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG - tig0010468:26635-26654 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG - tig0010468:26638-26657 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG - tig0010468:26641-26660 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG - tig0010468:26704-26723 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG - tig0010468:26872-26891 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG - tig0010468:26881-26900 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG - tig0010468:27013-27032 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG - tig0010468:27271-27290 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG - tig0010468:27342-27361 None:intergenic 35.0%
TAGTCAACATTCAATGGTCA+CGG + tig0010468:27385-27404 Msa1348450:intron 35.0%
CGTTTGTCGTAAAAAAGACA+AGG + tig0010468:27450-27469 Msa1348450:intron 35.0%
AAATCAATCATCAGTCACCT+TGG - tig0010468:27738-27757 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG + tig0010468:27858-27877 Msa1348450:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG + tig0010468:27864-27883 Msa1348450:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG + tig0010468:27865-27884 Msa1348450:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG - tig0010468:27974-27993 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG + tig0010468:27971-27990 Msa1348450:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG + tig0010468:27977-27996 Msa1348450:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG + tig0010468:27983-28002 Msa1348450:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG + tig0010468:27984-28003 Msa1348450:CDS 35.0%
! TCTTTTTCCTCATCCATGTT+TGG - tig0010468:26368-26387 None:intergenic 35.0%
CATGGATGAGGAAAAAGAAA+AGG + tig0010468:26370-26389 Msa1348450:CDS 35.0%
ATATTAGAAACTGCCACACA+AGG + tig0010468:26395-26414 Msa1348450:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG - tig0010468:26435-26454 None:intergenic 35.0%
!!! AGTTCAGTGTTTTGAAGAGA+GGG - tig0010468:26464-26483 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG - tig0010468:26508-26527 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG - tig0010468:26635-26654 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG - tig0010468:26638-26657 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG - tig0010468:26641-26660 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG - tig0010468:26704-26723 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG - tig0010468:26872-26891 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG - tig0010468:26881-26900 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG - tig0010468:27013-27032 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG - tig0010468:27271-27290 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG - tig0010468:27342-27361 None:intergenic 35.0%
TAGTCAACATTCAATGGTCA+CGG + tig0010468:27385-27404 Msa1348450:intron 35.0%
CGTTTGTCGTAAAAAAGACA+AGG + tig0010468:27450-27469 Msa1348450:intron 35.0%
AAATCAATCATCAGTCACCT+TGG - tig0010468:27738-27757 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG + tig0010468:27858-27877 Msa1348450:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG + tig0010468:27864-27883 Msa1348450:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG + tig0010468:27865-27884 Msa1348450:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG - tig0010468:27974-27993 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG + tig0010468:27971-27990 Msa1348450:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG + tig0010468:27977-27996 Msa1348450:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG + tig0010468:27983-28002 Msa1348450:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG + tig0010468:27984-28003 Msa1348450:CDS 35.0%
! GGATTTTCCAAACATGGATG+AGG + tig0010468:26358-26377 Msa1348450:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG - tig0010468:26411-26430 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGGTT+GGG - tig0010468:26459-26478 None:intergenic 40.0%
!!! GAGTTCAGTGTTTTGAAGAG+AGG - tig0010468:26465-26484 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG - tig0010468:26662-26681 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG - tig0010468:26670-26689 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG - tig0010468:26732-26751 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG + tig0010468:26730-26749 Msa1348450:CDS 40.0%
AAGAAAGAGGCTGTTTACCA+CGG - tig0010468:27000-27019 None:intergenic 40.0%
ATGTAAGAGGCTGTTTACCA+CGG - tig0010468:27129-27148 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG + tig0010468:27280-27299 Msa1348450:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG - tig0010468:27647-27666 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG - tig0010468:27648-27667 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG + tig0010468:27673-27692 Msa1348450:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG + tig0010468:27684-27703 Msa1348450:CDS 40.0%
TATGGCTCCAAACCGATTAA+GGG + tig0010468:27702-27721 Msa1348450:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG + tig0010468:28029-28048 Msa1348450:CDS 40.0%
! GGATTTTCCAAACATGGATG+AGG + tig0010468:26358-26377 Msa1348450:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG - tig0010468:26411-26430 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGGTT+GGG - tig0010468:26459-26478 None:intergenic 40.0%
!!! GAGTTCAGTGTTTTGAAGAG+AGG - tig0010468:26465-26484 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG - tig0010468:26662-26681 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG - tig0010468:26670-26689 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG - tig0010468:26732-26751 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG + tig0010468:26730-26749 Msa1348450:CDS 40.0%
AAGAAAGAGGCTGTTTACCA+CGG - tig0010468:27000-27019 None:intergenic 40.0%
ATGTAAGAGGCTGTTTACCA+CGG - tig0010468:27129-27148 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG + tig0010468:27280-27299 Msa1348450:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG - tig0010468:27647-27666 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG - tig0010468:27648-27667 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG + tig0010468:27673-27692 Msa1348450:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG + tig0010468:27684-27703 Msa1348450:CDS 40.0%
TATGGCTCCAAACCGATTAA+GGG + tig0010468:27702-27721 Msa1348450:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG + tig0010468:28029-28048 Msa1348450:CDS 40.0%
!!! GTGTTTTGAAGAGAGGGTTG+GGG - tig0010468:26458-26477 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGGT+TGG - tig0010468:26460-26479 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG - tig0010468:26489-26508 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG + tig0010468:26518-26537 Msa1348450:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG - tig0010468:26632-26651 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG + tig0010468:26803-26822 Msa1348450:CDS 45.0%
GATGAGTTAGGTGAAAGAGG+TGG - tig0010468:26869-26888 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG - tig0010468:26999-27018 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG - tig0010468:27074-27093 None:intergenic 45.0%
! AGATGGTACTAGTCTGCCAT+TGG - tig0010468:27083-27102 None:intergenic 45.0%
TTTACCACGGGAGATAGAAG+GGG - tig0010468:27116-27135 None:intergenic 45.0%
GTTTACCACGGGAGATAGAA+GGG - tig0010468:27117-27136 None:intergenic 45.0%
TGTTTACCACGGGAGATAGA+AGG - tig0010468:27118-27137 None:intergenic 45.0%
TGTAAGAGGCTGTTTACCAC+GGG - tig0010468:27128-27147 None:intergenic 45.0%
TTCAATGACGGCGATGAAAG+AGG - tig0010468:27259-27278 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG - tig0010468:27326-27345 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG + tig0010468:27332-27351 Msa1348450:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG - tig0010468:27678-27697 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG + tig0010468:27676-27695 Msa1348450:CDS 45.0%
GTATGGCTCCAAACCGATTA+AGG + tig0010468:27701-27720 Msa1348450:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG - tig0010468:27712-27731 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG - tig0010468:27717-27736 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG + tig0010468:27718-27737 Msa1348450:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG - tig0010468:27732-27751 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG - tig0010468:27955-27974 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG + tig0010468:28028-28047 Msa1348450:CDS 45.0%
!!! GTGTTTTGAAGAGAGGGTTG+GGG - tig0010468:26458-26477 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGGT+TGG - tig0010468:26460-26479 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG - tig0010468:26489-26508 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG + tig0010468:26518-26537 Msa1348450:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG - tig0010468:26632-26651 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG + tig0010468:26803-26822 Msa1348450:CDS 45.0%
GATGAGTTAGGTGAAAGAGG+TGG - tig0010468:26869-26888 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG - tig0010468:26999-27018 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG - tig0010468:27074-27093 None:intergenic 45.0%
! AGATGGTACTAGTCTGCCAT+TGG - tig0010468:27083-27102 None:intergenic 45.0%
TTTACCACGGGAGATAGAAG+GGG - tig0010468:27116-27135 None:intergenic 45.0%
GTTTACCACGGGAGATAGAA+GGG - tig0010468:27117-27136 None:intergenic 45.0%
TGTTTACCACGGGAGATAGA+AGG - tig0010468:27118-27137 None:intergenic 45.0%
TGTAAGAGGCTGTTTACCAC+GGG - tig0010468:27128-27147 None:intergenic 45.0%
TTCAATGACGGCGATGAAAG+AGG - tig0010468:27259-27278 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG - tig0010468:27326-27345 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG + tig0010468:27332-27351 Msa1348450:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG - tig0010468:27678-27697 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG + tig0010468:27676-27695 Msa1348450:CDS 45.0%
GTATGGCTCCAAACCGATTA+AGG + tig0010468:27701-27720 Msa1348450:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG - tig0010468:27712-27731 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG - tig0010468:27717-27736 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG + tig0010468:27718-27737 Msa1348450:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG - tig0010468:27732-27751 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG - tig0010468:27955-27974 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG + tig0010468:28028-28047 Msa1348450:CDS 45.0%
GCCTTTACGGTGGAGTAAGT+TGG - tig0010468:26522-26541 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG - tig0010468:26559-26578 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG - tig0010468:26566-26585 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG - tig0010468:26577-26596 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG - tig0010468:26629-26648 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG - tig0010468:26659-26678 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG - tig0010468:26813-26832 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG - tig0010468:26830-26849 None:intergenic 50.0%
TGAAAGAGGTGGTTTACCGC+TGG - tig0010468:26858-26877 None:intergenic 50.0%
! GTGGTAGATGGCATTGGACA+TGG - tig0010468:26959-26978 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG - tig0010468:27065-27084 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG - tig0010468:27233-27252 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG - tig0010468:27234-27253 None:intergenic 50.0%
AATGACGGCGATGAAAGAGG+CGG - tig0010468:27256-27275 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG - tig0010468:27323-27342 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG + tig0010468:27640-27659 Msa1348450:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG + tig0010468:27868-27887 Msa1348450:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG - tig0010468:27875-27894 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG + tig0010468:27874-27893 Msa1348450:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG - tig0010468:27952-27971 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG + tig0010468:28025-28044 Msa1348450:CDS 50.0%
GCCTTTACGGTGGAGTAAGT+TGG - tig0010468:26522-26541 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG - tig0010468:26559-26578 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG - tig0010468:26566-26585 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG - tig0010468:26577-26596 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG - tig0010468:26629-26648 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG - tig0010468:26659-26678 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG - tig0010468:26813-26832 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG - tig0010468:26830-26849 None:intergenic 50.0%
TGAAAGAGGTGGTTTACCGC+TGG - tig0010468:26858-26877 None:intergenic 50.0%
! GTGGTAGATGGCATTGGACA+TGG - tig0010468:26959-26978 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG - tig0010468:27065-27084 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG - tig0010468:27233-27252 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG - tig0010468:27234-27253 None:intergenic 50.0%
AATGACGGCGATGAAAGAGG+CGG - tig0010468:27256-27275 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG - tig0010468:27323-27342 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG + tig0010468:27640-27659 Msa1348450:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG + tig0010468:27868-27887 Msa1348450:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG - tig0010468:27875-27894 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG + tig0010468:27874-27893 Msa1348450:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG - tig0010468:27952-27971 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG + tig0010468:28025-28044 Msa1348450:CDS 50.0%
GGGTTGCATTTGGATTGCGG+CGG - tig0010468:26556-26575 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG - tig0010468:26576-26595 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG - tig0010468:26578-26597 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG - tig0010468:26587-26606 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG - tig0010468:26593-26612 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG - tig0010468:26770-26789 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG - tig0010468:26795-26814 None:intergenic 55.0%
TTTACCGCTGGAGACAGCAG+GGG - tig0010468:26846-26865 None:intergenic 55.0%
GTTTACCGCTGGAGACAGCA+GGG - tig0010468:26847-26866 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG + tig0010468:26902-26921 Msa1348450:CDS 55.0%
AGTGTCTCCAATGGCAGGCT+AGG + tig0010468:26932-26951 Msa1348450:CDS 55.0%
ACATGGACCTAGCCTGCCAT+TGG - tig0010468:26942-26961 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG - tig0010468:26989-27008 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG - tig0010468:26990-27009 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG - tig0010468:27031-27050 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG + tig0010468:27031-27050 Msa1348450:CDS 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG + tig0010468:27064-27083 Msa1348450:CDS 55.0%
GAGATAGAAGGGGTGAGGAG+TGG - tig0010468:27106-27125 None:intergenic 55.0%
TTCATGTCCTCCGCCATCAC+CGG + tig0010468:27160-27179 Msa1348450:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG - tig0010468:27176-27195 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG - tig0010468:27182-27201 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG + tig0010468:27181-27200 Msa1348450:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG + tig0010468:27185-27204 Msa1348450:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG - tig0010468:27217-27236 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG - tig0010468:27235-27254 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG + tig0010468:27292-27311 Msa1348450:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG + tig0010468:27293-27312 Msa1348450:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG - tig0010468:27302-27321 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG + tig0010468:27989-28008 Msa1348450:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG + tig0010468:27990-28009 Msa1348450:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG + tig0010468:28003-28022 Msa1348450:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG + tig0010468:28004-28023 Msa1348450:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG + tig0010468:28005-28024 Msa1348450:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG + tig0010468:28006-28025 Msa1348450:CDS 55.0%
GGGTTGCATTTGGATTGCGG+CGG - tig0010468:26556-26575 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG - tig0010468:26576-26595 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG - tig0010468:26578-26597 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG - tig0010468:26587-26606 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG - tig0010468:26593-26612 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG - tig0010468:26770-26789 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG - tig0010468:26795-26814 None:intergenic 55.0%
TTTACCGCTGGAGACAGCAG+GGG - tig0010468:26846-26865 None:intergenic 55.0%
GTTTACCGCTGGAGACAGCA+GGG - tig0010468:26847-26866 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG + tig0010468:26902-26921 Msa1348450:CDS 55.0%
AGTGTCTCCAATGGCAGGCT+AGG + tig0010468:26932-26951 Msa1348450:CDS 55.0%
ACATGGACCTAGCCTGCCAT+TGG - tig0010468:26942-26961 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG - tig0010468:26989-27008 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG - tig0010468:26990-27009 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG - tig0010468:27031-27050 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG + tig0010468:27031-27050 Msa1348450:CDS 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG + tig0010468:27064-27083 Msa1348450:CDS 55.0%
GAGATAGAAGGGGTGAGGAG+TGG - tig0010468:27106-27125 None:intergenic 55.0%
TTCATGTCCTCCGCCATCAC+CGG + tig0010468:27160-27179 Msa1348450:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG - tig0010468:27176-27195 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG - tig0010468:27182-27201 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG + tig0010468:27181-27200 Msa1348450:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG + tig0010468:27185-27204 Msa1348450:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG - tig0010468:27217-27236 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG - tig0010468:27235-27254 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG + tig0010468:27292-27311 Msa1348450:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG + tig0010468:27293-27312 Msa1348450:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG - tig0010468:27302-27321 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG + tig0010468:27989-28008 Msa1348450:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG + tig0010468:27990-28009 Msa1348450:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG + tig0010468:28003-28022 Msa1348450:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG + tig0010468:28004-28023 Msa1348450:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG + tig0010468:28005-28024 Msa1348450:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG + tig0010468:28006-28025 Msa1348450:CDS 55.0%
GGAAGCGAGCGTGGCCTTTA+CGG - tig0010468:26535-26554 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG - tig0010468:26603-26622 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG - tig0010468:26608-26627 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG - tig0010468:26609-26628 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG - tig0010468:26612-26631 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG - tig0010468:26615-26634 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG - tig0010468:26626-26645 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG + tig0010468:26773-26792 Msa1348450:CDS 60.0%
GGCGACGGCAGTGTTTCCAA+TGG + tig0010468:26794-26813 Msa1348450:CDS 60.0%
GGTTTACCGCTGGAGACAGC+AGG - tig0010468:26848-26867 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG - tig0010468:26906-26925 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG - tig0010468:26924-26943 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG + tig0010468:26927-26946 Msa1348450:CDS 60.0%
GTGGGGGTGGTAGATGGCAT+TGG - tig0010468:26965-26984 None:intergenic 60.0%
TTTACCACGGGAGACAGCGG+GGG - tig0010468:26987-27006 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG - tig0010468:26988-27007 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG - tig0010468:27044-27063 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG - tig0010468:27045-27064 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG - tig0010468:27046-27065 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG + tig0010468:27043-27062 Msa1348450:CDS 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG - tig0010468:27057-27076 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG - tig0010468:27100-27119 None:intergenic 60.0%
CACGGGAGATAGAAGGGGTG+AGG - tig0010468:27111-27130 None:intergenic 60.0%
CTCACCCCTTCTATCTCCCG+TGG + tig0010468:27109-27128 Msa1348450:CDS 60.0%
! GCTTCTATCGCCGGTGATGG+CGG - tig0010468:27173-27192 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG + tig0010468:27190-27209 Msa1348450:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG - tig0010468:27227-27246 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG + tig0010468:27997-28016 Msa1348450:CDS 60.0%
GGAAGCGAGCGTGGCCTTTA+CGG - tig0010468:26535-26554 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG - tig0010468:26603-26622 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG - tig0010468:26608-26627 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG - tig0010468:26609-26628 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG - tig0010468:26612-26631 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG - tig0010468:26615-26634 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG - tig0010468:26626-26645 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG + tig0010468:26773-26792 Msa1348450:CDS 60.0%
GGCGACGGCAGTGTTTCCAA+TGG + tig0010468:26794-26813 Msa1348450:CDS 60.0%
GGTTTACCGCTGGAGACAGC+AGG - tig0010468:26848-26867 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG - tig0010468:26906-26925 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG - tig0010468:26924-26943 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG + tig0010468:26927-26946 Msa1348450:CDS 60.0%
GTGGGGGTGGTAGATGGCAT+TGG - tig0010468:26965-26984 None:intergenic 60.0%
TTTACCACGGGAGACAGCGG+GGG - tig0010468:26987-27006 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG - tig0010468:26988-27007 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG - tig0010468:27044-27063 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG - tig0010468:27045-27064 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG - tig0010468:27046-27065 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG + tig0010468:27043-27062 Msa1348450:CDS 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG - tig0010468:27057-27076 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG - tig0010468:27100-27119 None:intergenic 60.0%
CACGGGAGATAGAAGGGGTG+AGG - tig0010468:27111-27130 None:intergenic 60.0%
CTCACCCCTTCTATCTCCCG+TGG + tig0010468:27109-27128 Msa1348450:CDS 60.0%
! GCTTCTATCGCCGGTGATGG+CGG - tig0010468:27173-27192 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG + tig0010468:27190-27209 Msa1348450:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG - tig0010468:27227-27246 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG + tig0010468:27997-28016 Msa1348450:CDS 60.0%
AGCGAGCGTGGCCTTTACGG+TGG - tig0010468:26532-26551 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG - tig0010468:26789-26808 None:intergenic 65.0%
CTCACCCCTGCTGTCTCCAG+CGG + tig0010468:26839-26858 Msa1348450:CDS 65.0%
GCTCGCGATATCACCGGCGA+CGG + tig0010468:26908-26927 Msa1348450:CDS 65.0%
GGCGACGGCAGTGTCTCCAA+TGG + tig0010468:26923-26942 Msa1348450:CDS 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG - tig0010468:27041-27060 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG - tig0010468:27047-27066 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG - tig0010468:27053-27072 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG - tig0010468:27170-27189 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG - tig0010468:27200-27219 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG + tig0010468:27223-27242 Msa1348450:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG - tig0010468:27228-27247 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG + tig0010468:27226-27245 Msa1348450:CDS 65.0%
AGCGAGCGTGGCCTTTACGG+TGG - tig0010468:26532-26551 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG - tig0010468:26789-26808 None:intergenic 65.0%
CTCACCCCTGCTGTCTCCAG+CGG + tig0010468:26839-26858 Msa1348450:CDS 65.0%
GCTCGCGATATCACCGGCGA+CGG + tig0010468:26908-26927 Msa1348450:CDS 65.0%
GGCGACGGCAGTGTCTCCAA+TGG + tig0010468:26923-26942 Msa1348450:CDS 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG - tig0010468:27041-27060 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG - tig0010468:27047-27066 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG - tig0010468:27053-27072 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG - tig0010468:27170-27189 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG - tig0010468:27200-27219 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG + tig0010468:27223-27242 Msa1348450:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG - tig0010468:27228-27247 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG + tig0010468:27226-27245 Msa1348450:CDS 65.0%
GATTGCGGCGGAAGCGAGCG+TGG - tig0010468:26544-26563 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG - tig0010468:26778-26797 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG + tig0010468:26779-26798 Msa1348450:CDS 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG - tig0010468:26786-26805 None:intergenic 70.0%
GATTGCGGCGGAAGCGAGCG+TGG - tig0010468:26544-26563 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG - tig0010468:26778-26797 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG + tig0010468:26779-26798 Msa1348450:CDS 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG - tig0010468:26786-26805 None:intergenic 70.0%
GCGGGGGTGGGGGTGGTAGA+TGG - tig0010468:26971-26990 None:intergenic 75.0%
ACGGGAGACAGCGGGGGTGG+GGG - tig0010468:26981-27000 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG - tig0010468:26982-27001 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG - tig0010468:26983-27002 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG - tig0010468:26984-27003 None:intergenic 75.0%
GCGGGGGTGGGGGTGGTAGA+TGG - tig0010468:26971-26990 None:intergenic 75.0%
ACGGGAGACAGCGGGGGTGG+GGG - tig0010468:26981-27000 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG - tig0010468:26982-27001 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG - tig0010468:26983-27002 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG - tig0010468:26984-27003 None:intergenic 75.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG - tig0010468:26783-26802 None:intergenic 80.0%
! GGAGACAGCGGGGGTGGGGG+TGG - tig0010468:26978-26997 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG + tig0010468:26980-26999 Msa1348450:CDS 80.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG - tig0010468:26783-26802 None:intergenic 80.0%
! GGAGACAGCGGGGGTGGGGG+TGG - tig0010468:26978-26997 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG + tig0010468:26980-26999 Msa1348450:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0010468 gene 26341 28057 26341 ID=Msa1348450;Name=Msa1348450
tig0010468 mRNA 26341 28057 26341 ID=Msa1348450-mRNA-1;Parent=Msa1348450;Name=Msa1348450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|452
tig0010468 exon 26341 27353 26341 ID=Msa1348450-mRNA-1:exon:6433;Parent=Msa1348450-mRNA-1
tig0010468 exon 27614 27739 27614 ID=Msa1348450-mRNA-1:exon:6434;Parent=Msa1348450-mRNA-1
tig0010468 exon 27838 28057 27838 ID=Msa1348450-mRNA-1:exon:6435;Parent=Msa1348450-mRNA-1
tig0010468 CDS 26341 27353 26341 ID=Msa1348450-mRNA-1:cds;Parent=Msa1348450-mRNA-1
tig0010468 CDS 27614 27739 27614 ID=Msa1348450-mRNA-1:cds;Parent=Msa1348450-mRNA-1
tig0010468 CDS 27838 28057 27838 ID=Msa1348450-mRNA-1:cds;Parent=Msa1348450-mRNA-1
Gene Sequence

>Msa1348450

ATGACTTTGAGATTGATGGATTTTCCAAACATGGATGAGGAAAAAGAAAAGGCAATATTAGAAACTGCCACACAAGGCTTAAACTCACTTGCCAACTTCGCTAATAATGTCTCTCCCCAACCCTCTCTTCAAAACACTGAACTCACCAACATCACTGTTTCAGACCTCAAGAAACTATCCAACTTACTCCACCGTAAAGGCCACGCTCGCTTCCGCCGCAATCCAAATGCAACCCCTGATCAACCGCTGCCACAAACTTCCACTCCCTCCACCTCTACTCAGCCACCTCCACCACCACCACTTCAAATTCAAATTCCTCCTAAGAGCCATAACCAACCTTTAACTCTCGATTTTACTAAACCTTACACCTTTAAATCTAACCCTAAATCCTTAGATCTAGAAATCCCCAAGGAAACATTTAGTTTTCCATCACTCCTATCCTCCGCCATCACCGGCGACGGCAGTGTTTCCAATGGCAGACTTGGTCCATCTCAAATTCTCACCCCTGCTGTCTCCAGCGGTAAACCACCTCTTTCACCTAACTCATCATTCATGTCATCTGCCTTTGCTCGCGATATCACCGGCGACGGCAGTGTCTCCAATGGCAGGCTAGGTCCATGTCCAATGCCATCTACCACCCCCACCCCCGCTGTCTCCCGTGGTAAACAGCCTCTTTCTTCTATCTCACCATTCATGTCCTCCCCCATCACCGGCCATTACACCGGCGAAGCCAGTGTTTCCAATGGCAGACTAGTACCATCTCCACTCCTCACCCCTTCTATCTCCCGTGGTAAACAGCCTCTTACATCTTACTCATCTTTCATGTCCTCCGCCATCACCGGCGATAGAAGCGTTTCCAGCGGCAGGATCGGTCCATCTTATACCCTCACCCCTGCTGTCTCTGGTGGTAAACCGCCTCTTTCATCGCCGTCATTGAAGAAAAGCTGTCACAATCACTCCGGCGATGTCTCTGGGAAAACCTCCGCATCTAAGAAATGCCACTGCCAGAAAAGGAAAAATCGGAACAGGAGACAAGTGAGAGTCCCGTGCATAAGTTCAAGGATTGCTGATATACCAGCAGATGAGTATTCATGGAGGAAGTATGGCTCCAAACCGATTAAGGGAACACCACATCCAAGGGGTTATTATAGGTGCACTATGTCTAAAAATTGTCCAGCTAGGAAAAGGGTGGAGAAGGCGAAAGATGATCCAAATATACTAGTTGTAACGTATGAGTTTGAGCATCGTCACCACCAGCTTCATAATCAAGCCCCAATGCAAGAGAATAATTCTGGTTCAGGTTCAGGGAGTGGGAGCATGGATTTGGGGGTGTTTGAGCTAACCTTAGGAGGGAATTAG
Protein sequence

>Msa1348450

MTLRLMDFPNMDEEKEKAILETATQGLNSLANFANNVSPQPSLQNTELTNITVSDLKKLSNLLHRKGHARFRRNPNATPDQPLPQTSTPSTSTQPPPPPPLQIQIPPKSHNQPLTLDFTKPYTFKSNPKSLDLEIPKETFSFPSLLSSAITGDGSVSNGRLGPSQILTPAVSSGKPPLSPNSSFMSSAFARDITGDGSVSNGRLGPCPMPSTTPTPAVSRGKQPLSSISPFMSSPITGHYTGEASVSNGRLVPSPLLTPSISRGKQPLTSYSSFMSSAITGDRSVSSGRIGPSYTLTPAVSGGKPPLSSPSLKKSCHNHSGDVSGKTSASKKCHCQKRKNRNRRQVRVPCISSRIADIPADEYSWRKYGSKPIKGTPHPRGYYRCTMSKNCPARKRVEKAKDDPNILVVTYEFEHRHHQLHNQAPMQENNSGSGSGSGSMDLGVFELTLGGN*