Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348840 | XP_013457070.1 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348840 | sp|F4I7C7|WAPL1_ARATH | 47.643 | 594 | 287 | 12 | 1 | 584 | 58 | 637 | 5.37e-139 | 442 |
Msa1348840 | sp|F4I7C7|WAPL1_ARATH | 55.352 | 327 | 123 | 6 | 645 | 954 | 608 | 928 | 2.54e-86 | 300 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348840 | A0A072UNY9 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0936190 | Msa1348840 | 0.834772 | 2.470598e-56 | -8.615850e-47 |
Msa0973090 | Msa1348840 | 0.828200 | 1.026045e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348840 | MtrunA17_Chr4g0047621 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1348840 | AT1G11060.1 | 47.643 | 594 | 287 | 12 | 1 | 584 | 58 | 637 | 5.46e-140 | 442 |
Msa1348840 | AT1G11060.1 | 55.352 | 327 | 123 | 6 | 645 | 954 | 608 | 928 | 2.59e-87 | 300 |
Msa1348840 | AT1G61030.1 | 44.845 | 582 | 268 | 10 | 1 | 570 | 1 | 541 | 2.04e-133 | 422 |
Msa1348840 | AT1G61030.1 | 51.404 | 356 | 148 | 9 | 612 | 955 | 497 | 839 | 1.34e-90 | 307 |
Find 251 sgRNAs with CRISPR-Local
Find 690 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTTCCTGGAACTATTT+TGG | 0.054582 | tig0010571:-44789 | None:intergenic |
CATTCTTCCTGGAACTATTT+TGG | 0.054582 | tig0010571:-44927 | None:intergenic |
GCTTAATGACCCTTTCTTTA+TGG | 0.079015 | tig0010571:+43723 | Msa1348840:CDS |
GACAATAGTTGATGGAATTT+TGG | 0.108553 | tig0010571:+41061 | Msa1348840:CDS |
GAGGAAGAATGTTCACTTTA+AGG | 0.140023 | tig0010571:+45077 | Msa1348840:CDS |
CCCAATTCAATCGACGATTT+TGG | 0.157665 | tig0010571:+40479 | Msa1348840:CDS |
TGACTCTTCTTGACTCATTT+TGG | 0.158032 | tig0010571:-45268 | None:intergenic |
TCTGGGCTTGCTTGTAAATC+TGG | 0.214053 | tig0010571:+45772 | Msa1348840:CDS |
TACAATTAACTAGAACTTCT+TGG | 0.244111 | tig0010571:-42078 | None:intergenic |
GTATGTGCGAACAATCATTT+TGG | 0.248192 | tig0010571:-40288 | None:intergenic |
AGTCTGATACGTCGTCGTTT+AGG | 0.255657 | tig0010571:-40355 | None:intergenic |
TTATCTGCCATTTCTCTTGA+TGG | 0.262164 | tig0010571:+42196 | Msa1348840:CDS |
ACCAAAATCGTCGATTGAAT+TGG | 0.284859 | tig0010571:-40480 | None:intergenic |
GTCTGATACGTCGTCGTTTA+GGG | 0.292733 | tig0010571:-40354 | None:intergenic |
GTACAGCCACGTCTTGCTTT+AGG | 0.296324 | tig0010571:+47879 | Msa1348840:three_prime_UTR |
GGCGGCTATGTCGATGAATT+TGG | 0.296819 | tig0010571:-40234 | None:intergenic |
CGCCGCAAACCATCAATTTC+CGG | 0.297863 | tig0010571:+40314 | Msa1348840:CDS |
GCAGGAATTTCATCTGTCTT+TGG | 0.310658 | tig0010571:+47771 | Msa1348840:intron |
AAGTACCTCGGTTGCGATCT+TGG | 0.333001 | tig0010571:+38213 | Msa1348840:five_prime_UTR |
TATGTCGATGAATTTGGATT+TGG | 0.337025 | tig0010571:-40228 | None:intergenic |
CCAAAATCGTCGATTGAATT+GGG | 0.338596 | tig0010571:-40479 | None:intergenic |
TCGAATCAGAAGGGCTAGTT+TGG | 0.340230 | tig0010571:+40670 | Msa1348840:CDS |
CATTCTTCCTCGAACTACTT+AGG | 0.349484 | tig0010571:-45065 | None:intergenic |
GAGGTTAATTTCGCTCTTGA+TGG | 0.351464 | tig0010571:+40626 | Msa1348840:CDS |
GTAGAGTGGGTCTTGGGATT+GGG | 0.351778 | tig0010571:-40396 | None:intergenic |
TCTTAAGTGCCTGAAGATAA+TGG | 0.352174 | tig0010571:+43196 | Msa1348840:CDS |
TGGGTCTTGGGATTGGGATT+GGG | 0.353604 | tig0010571:-40390 | None:intergenic |
GCAATTAATTGACAGCCAAT+AGG | 0.354576 | tig0010571:-45581 | None:intergenic |
TTGATGGAGGCGCAGGAGTT+TGG | 0.359647 | tig0010571:+40581 | Msa1348840:CDS |
GGTGAAAGTGAGGCGGGAGC+TGG | 0.363636 | tig0010571:+46898 | Msa1348840:CDS |
GTGGGTCTTGGGATTGGGAT+TGG | 0.365270 | tig0010571:-40391 | None:intergenic |
GTAATTCCTACTGGAACTAA+TGG | 0.366824 | tig0010571:-44551 | None:intergenic |
TCAGCAATGTTAACCACTTT+GGG | 0.367940 | tig0010571:-42156 | None:intergenic |
GGTAGAGTGGGTCTTGGGAT+TGG | 0.371751 | tig0010571:-40397 | None:intergenic |
AATCGGAGATCGGTGGTTTA+CGG | 0.373107 | tig0010571:-40265 | None:intergenic |
CGTAAACTGAACATTCTTCC+TGG | 0.374073 | tig0010571:-44938 | None:intergenic |
GGTTGCAGCTGCAAGATTGC+TGG | 0.380197 | tig0010571:-41105 | None:intergenic |
CTATCTTCCAAGACTACAAC+AGG | 0.386943 | tig0010571:-44832 | None:intergenic |
TTGACTAACGACAACCCTAT+TGG | 0.388364 | tig0010571:+45566 | Msa1348840:CDS |
CTATCTTCCAAGATTACAAC+CGG | 0.392705 | tig0010571:-44970 | None:intergenic |
TTGATAGTTGTGGATACAAT+TGG | 0.396412 | tig0010571:-41941 | None:intergenic |
CACTAGTTAAAATGTAGAAA+AGG | 0.398233 | tig0010571:-41127 | None:intergenic |
CATCAAATGCAAAGGGGTCT+TGG | 0.398429 | tig0010571:-45131 | None:intergenic |
TTGAGAAGAGAAGGCGAAAT+CGG | 0.399137 | tig0010571:-40420 | None:intergenic |
CGATAGTAGGTCCCACTTAG+AGG | 0.400082 | tig0010571:-45169 | None:intergenic |
GTCAGCAATGTTAACCACTT+TGG | 0.402172 | tig0010571:-42157 | None:intergenic |
CTACTGGAACTAATGGATAT+AGG | 0.404595 | tig0010571:-44544 | None:intergenic |
CAATTAATTGACAGCCAATA+GGG | 0.404969 | tig0010571:-45580 | None:intergenic |
AAGTACCCCGGTTGTAATCT+TGG | 0.406401 | tig0010571:+44963 | Msa1348840:CDS |
CATCAAATGCAAATGGATCT+TGG | 0.407697 | tig0010571:-44993 | None:intergenic |
CCACGACCCAAAATAGTTCC+AGG | 0.411206 | tig0010571:+44782 | Msa1348840:CDS |
ACTTCCTTCTTCAGAAGGCT+TGG | 0.414944 | tig0010571:+46816 | Msa1348840:CDS |
ACGTACCCCGGTTGTAATCT+TGG | 0.416580 | tig0010571:+45101 | Msa1348840:CDS |
TTCTTTACCATCAAGAGAAA+TGG | 0.418970 | tig0010571:-42203 | None:intergenic |
TCATCTTCCAAGATTACAAC+CGG | 0.419314 | tig0010571:-45108 | None:intergenic |
GTCATAACTTATGTCAGAAC+TGG | 0.426510 | tig0010571:-45313 | None:intergenic |
CTATGACCCAAAATAGTTCC+AGG | 0.431367 | tig0010571:+44920 | Msa1348840:CDS |
GTGAAAGTGAGGCGGGAGCT+GGG | 0.432770 | tig0010571:+46899 | Msa1348840:CDS |
TGAGAAGAGAAGGCGAAATC+GGG | 0.434156 | tig0010571:-40419 | None:intergenic |
AAGGCTTGGACCAGGAGGTT+CGG | 0.436011 | tig0010571:+46830 | Msa1348840:CDS |
GATCGGTGGTTTACGGTGGT+TGG | 0.436729 | tig0010571:-40258 | None:intergenic |
TAAGGAGGCAATCAGTTAGA+AGG | 0.436868 | tig0010571:-45347 | None:intergenic |
AATGGAGAATGTTCAGCTTA+CGG | 0.440258 | tig0010571:+38189 | None:intergenic |
ATTCTTCCTCGAACTACTTA+GGG | 0.440300 | tig0010571:-45064 | None:intergenic |
ATCGGGGTAGAGTGGGTCTT+GGG | 0.442872 | tig0010571:-40402 | None:intergenic |
AAAAGGACCATCTATGTGAT+AGG | 0.443163 | tig0010571:+45711 | Msa1348840:CDS |
AGTAAAGTGAACATTCTTCC+TGG | 0.443265 | tig0010571:-44800 | None:intergenic |
GAATACGTTCCGGAAATTGA+TGG | 0.443414 | tig0010571:-40323 | None:intergenic |
AGACTTGCTAAGTTGTGATC+TGG | 0.443554 | tig0010571:-47435 | None:intergenic |
TCAGCTCCGTAAAAGACAAT+GGG | 0.444372 | tig0010571:-43476 | None:intergenic |
TTTAGGATTTGTTGCTACTC+AGG | 0.444391 | tig0010571:+47896 | Msa1348840:three_prime_UTR |
TGCTTTGTCTTTGATAGTTG+TGG | 0.445089 | tig0010571:-41951 | None:intergenic |
CACACCATTGTAATTCCTAC+TGG | 0.446552 | tig0010571:-44560 | None:intergenic |
TTGAGAAGGATGGTCGTAAC+AGG | 0.449162 | tig0010571:+45795 | Msa1348840:CDS |
TTGGGATTGGGATTGGGAAA+GGG | 0.449889 | tig0010571:-40384 | None:intergenic |
AAAGACAATGGGGTTGCCTT+AGG | 0.453975 | tig0010571:-43465 | None:intergenic |
TTCCGGAAATTGATGGTTTG+CGG | 0.454271 | tig0010571:-40316 | None:intergenic |
ATTTGTCTTTCAGAATTGTA+AGG | 0.456261 | tig0010571:+43109 | Msa1348840:intron |
ATTTCAAGTTCTCACGTCCT+TGG | 0.459989 | tig0010571:+48170 | Msa1348840:three_prime_UTR |
TGGTTTACGGTGGTTGGTGG+CGG | 0.461836 | tig0010571:-40252 | None:intergenic |
ACCGAGCACATGTCAATAGT+TGG | 0.463917 | tig0010571:-44627 | None:intergenic |
GCTATGTCTATGTTAATTGC+TGG | 0.464905 | tig0010571:+45623 | Msa1348840:CDS |
TGCTGCCCATGGAGGGTTGG+AGG | 0.467231 | tig0010571:+45601 | Msa1348840:CDS |
GTGCCACAACACAGCAAAGA+AGG | 0.467493 | tig0010571:+40711 | Msa1348840:CDS |
TCATCCTCATCAAATGCAAA+TGG | 0.468762 | tig0010571:-45000 | None:intergenic |
CTTGGGATTGGGATTGGGAA+AGG | 0.469988 | tig0010571:-40385 | None:intergenic |
TAACACAACAAGGTGATTCA+AGG | 0.470102 | tig0010571:-41895 | None:intergenic |
AAGCCTTCTTTGCTGTGTTG+TGG | 0.473030 | tig0010571:-40714 | None:intergenic |
GTTCTACTTCCTTCTTCAGA+AGG | 0.473358 | tig0010571:+46811 | Msa1348840:CDS |
CATCAAATGCAAATGGATCC+TGG | 0.473698 | tig0010571:-38243 | None:intergenic |
TCATCCTCATCAAATGCAAA+GGG | 0.473724 | tig0010571:-45138 | None:intergenic |
TCTAAGTGGGACCTACTATC+GGG | 0.476412 | tig0010571:+45171 | Msa1348840:CDS |
TTCTTCAGAAGGCTTGGACC+AGG | 0.476652 | tig0010571:+46822 | Msa1348840:CDS |
GGCCAGCGATGATTCTGAAC+TGG | 0.476713 | tig0010571:+43744 | Msa1348840:CDS |
ACTCATTTGCTTGGAATGAA+AGG | 0.476771 | tig0010571:+43432 | Msa1348840:CDS |
GTGGTTAACATTGCTGACTA+TGG | 0.479297 | tig0010571:+42162 | Msa1348840:CDS |
CATCAAATGCAAAGGGATCA+TGG | 0.479401 | tig0010571:-44855 | None:intergenic |
AGGATCAATTCATCCACATC+TGG | 0.481164 | tig0010571:+44718 | Msa1348840:CDS |
AATCGGGGTAGAGTGGGTCT+TGG | 0.482811 | tig0010571:-40403 | None:intergenic |
AGGTGTCCCTGTTGTAGTCT+TGG | 0.484408 | tig0010571:+44825 | Msa1348840:CDS |
ACTAGTTAAAATGTAGAAAA+GGG | 0.486321 | tig0010571:-41126 | None:intergenic |
TCTGGTGCTGTACGGAAGAC+TGG | 0.486444 | tig0010571:+42784 | Msa1348840:CDS |
TGCTGTTCTACAAGGTGAAA+AGG | 0.486486 | tig0010571:+47223 | Msa1348840:CDS |
TCATCGCTGGCCATAAAGAA+AGG | 0.486705 | tig0010571:-43733 | None:intergenic |
CCGAGCACATGTCAATAGTT+GGG | 0.486788 | tig0010571:-44626 | None:intergenic |
TCCGGCGACGTCGACGTTGA+TGG | 0.486979 | tig0010571:+40565 | Msa1348840:CDS |
CGGTGGTTTACGGTGGTTGG+TGG | 0.487827 | tig0010571:-40255 | None:intergenic |
TGCGATCTTGGAAGATAGCC+AGG | 0.488072 | tig0010571:+38225 | Msa1348840:five_prime_UTR |
ATGGCAAAGACAATAGTTGA+TGG | 0.488358 | tig0010571:+41053 | Msa1348840:CDS |
GATCAGTTAAGAGACTATAA+AGG | 0.490599 | tig0010571:+43766 | Msa1348840:CDS |
CTTGGACCAGGAGGTTCGGC+GGG | 0.491437 | tig0010571:+46834 | Msa1348840:CDS |
AGAAGGCTTCTTCGTTCTCA+AGG | 0.491687 | tig0010571:+40728 | Msa1348840:CDS |
TCACCTTGTAGAACAGCAGC+AGG | 0.492302 | tig0010571:-47218 | None:intergenic |
TACGTCGTCGTTTAGGGAAG+AGG | 0.493043 | tig0010571:-40348 | None:intergenic |
GAATACGGTGAAAGATCAAA+TGG | 0.493152 | tig0010571:+47848 | Msa1348840:exon |
ACCTGTGTTGGACAGATTTG+TGG | 0.497785 | tig0010571:+47461 | Msa1348840:CDS |
TTAGATGCCTATCACATAGA+TGG | 0.498416 | tig0010571:-45718 | None:intergenic |
TGGTCCAAGCCTTCTGAAGA+AGG | 0.498478 | tig0010571:-46820 | None:intergenic |
ATTGTCATTAAAATGCTCTC+AGG | 0.500925 | tig0010571:+43504 | Msa1348840:CDS |
GCAGGAGTTTGGCGAGATGA+TGG | 0.504193 | tig0010571:+40592 | Msa1348840:CDS |
AAATTCCTTGAGAACTGAAA+AGG | 0.509346 | tig0010571:+45694 | Msa1348840:CDS |
CTAGCCCTTCTGATTCGAAT+CGG | 0.510842 | tig0010571:-40665 | None:intergenic |
TTCTAGATCTATGTCTGCGT+CGG | 0.512413 | tig0010571:+43671 | Msa1348840:intron |
AACCACTTTGGGCATAACTC+TGG | 0.515359 | tig0010571:-42145 | None:intergenic |
ATTTCGCTCTTGATGGACTT+CGG | 0.516940 | tig0010571:+40633 | Msa1348840:CDS |
ATATCACCATGCTGGTGATA+CGG | 0.516959 | tig0010571:+48001 | Msa1348840:three_prime_UTR |
ACTATTGACATGTGCTCGGT+TGG | 0.517595 | tig0010571:+44630 | Msa1348840:CDS |
CTCTAAGTGGGACCTACTAT+CGG | 0.518152 | tig0010571:+45170 | Msa1348840:CDS |
AGAAGTTTCGAGCCAAGACT+TGG | 0.519231 | tig0010571:-41974 | None:intergenic |
TGAAAGTGAGGCGGGAGCTG+GGG | 0.520144 | tig0010571:+46900 | Msa1348840:CDS |
ACATAGCCTCCAACCCTCCA+TGG | 0.523096 | tig0010571:-45607 | None:intergenic |
GGAAGCTGAGAAAATGATTG+TGG | 0.525325 | tig0010571:+47244 | Msa1348840:CDS |
TCGTTACAGACTCATTTGCT+TGG | 0.526301 | tig0010571:+43423 | Msa1348840:intron |
TAACATCCCGCCGAACCTCC+TGG | 0.526713 | tig0010571:-46840 | None:intergenic |
AAAGACAAAGCACCAAGTCT+TGG | 0.528110 | tig0010571:+41962 | Msa1348840:CDS |
GGCACTTAAGAAGCAAGGTT+AGG | 0.528234 | tig0010571:-43184 | None:intergenic |
TAGCATTTCTTTCCACGGAA+AGG | 0.528323 | tig0010571:+47288 | Msa1348840:CDS |
AACCAGGGTGAAAGTGAGGC+GGG | 0.528592 | tig0010571:+46892 | Msa1348840:CDS |
TCCATCAACGTCGACGTCGC+CGG | 0.529306 | tig0010571:-40566 | None:intergenic |
GGAAGAGGATGAATACGTTC+CGG | 0.529989 | tig0010571:-40333 | None:intergenic |
CCACGTCCCTAAGTAGTTCG+AGG | 0.530299 | tig0010571:+45058 | Msa1348840:CDS |
TCATCGAGTCATGTAGAATA+CGG | 0.530850 | tig0010571:+47833 | Msa1348840:CDS |
TTGCCTCCTTACTGCTGTCA+AGG | 0.531934 | tig0010571:+45359 | Msa1348840:CDS |
CTTCAGGCACTTAAGAAGCA+AGG | 0.532826 | tig0010571:-43189 | None:intergenic |
TGGCATTCTTCGACAAGATG+AGG | 0.532898 | tig0010571:-40208 | None:intergenic |
ATCATCCTCATCAAATGCAA+AGG | 0.533512 | tig0010571:-45139 | None:intergenic |
GATGACGGTGAGCTGAAAGA+AGG | 0.533860 | tig0010571:-45653 | None:intergenic |
GTTAGAATTCTTAATAGAAG+AGG | 0.534143 | tig0010571:-44590 | None:intergenic |
ATCAGCTCCGTAAAAGACAA+TGG | 0.535349 | tig0010571:-43477 | None:intergenic |
GTCATTAAGCTTGTTATCAA+CGG | 0.536873 | tig0010571:-43710 | None:intergenic |
GCTTCTAGCATTTCTTTCCA+CGG | 0.540958 | tig0010571:+47283 | Msa1348840:CDS |
GCTTGGACCAGGAGGTTCGG+CGG | 0.541959 | tig0010571:+46833 | Msa1348840:CDS |
AGTCAAGAAGAGTCAAGTGA+TGG | 0.542611 | tig0010571:+45276 | Msa1348840:CDS |
AAGAATGTTCACTTTACTGA+AGG | 0.548743 | tig0010571:+44805 | Msa1348840:CDS |
ATGATATTGCGCCCTCTAAG+TGG | 0.550332 | tig0010571:+45157 | Msa1348840:CDS |
GTCATCCTCATCAAATGCAA+AGG | 0.550505 | tig0010571:-44863 | None:intergenic |
TCATCCTCATCAAATGCAAA+GGG | 0.551115 | tig0010571:-44862 | None:intergenic |
GGAAGAATCTTGAGAAGAGA+AGG | 0.551273 | tig0010571:-40429 | None:intergenic |
TGAGAACGGCATATAAAAGT+TGG | 0.552352 | tig0010571:-47959 | None:intergenic |
AACATTGCTGACTATGGAGA+AGG | 0.554008 | tig0010571:+42168 | Msa1348840:CDS |
GAGGCAATCAGTTAGAAGGC+TGG | 0.554722 | tig0010571:-45343 | None:intergenic |
GTTGCAGCTGCAAGATTGCT+GGG | 0.555283 | tig0010571:-41104 | None:intergenic |
CTCAAGATTCTTCCTCTCAG+TGG | 0.555445 | tig0010571:+40438 | Msa1348840:CDS |
AGCAAGTCTTGTACCTGTGT+TGG | 0.555893 | tig0010571:+47449 | Msa1348840:CDS |
GAATTACAATGGTGTGGAGA+GGG | 0.556952 | tig0010571:+44567 | Msa1348840:CDS |
GGCATTCTTCGACAAGATGA+GGG | 0.557708 | tig0010571:-40207 | None:intergenic |
AAAATACCTTGACAGCAGTA+AGG | 0.558563 | tig0010571:-45365 | None:intergenic |
AAGGCGAAATCGGGGTAGAG+TGG | 0.559686 | tig0010571:-40410 | None:intergenic |
GTCGACGTTGATGGAGGCGC+AGG | 0.560181 | tig0010571:+40574 | Msa1348840:CDS |
GTGGTCGACGGGAGCCAAAG+AGG | 0.560430 | tig0010571:+40507 | Msa1348840:CDS |
GATCCTGCTGCTGTTCTACA+AGG | 0.563168 | tig0010571:+47215 | Msa1348840:CDS |
GCTCTTGATGGACTTCGGAA+AGG | 0.566388 | tig0010571:+40638 | Msa1348840:CDS |
GGTTACACACAGACTATGCT+AGG | 0.569287 | tig0010571:-48067 | None:intergenic |
GTCAACCGATTCGAATCAGA+AGG | 0.570204 | tig0010571:+40660 | Msa1348840:CDS |
CAGAAACCTCTGGTGCTGTA+CGG | 0.570807 | tig0010571:+42776 | Msa1348840:intron |
AATTGCTGCCCATGGAGGGT+TGG | 0.571145 | tig0010571:+45598 | Msa1348840:CDS |
ATGACGGTGAGCTGAAAGAA+GGG | 0.571829 | tig0010571:-45652 | None:intergenic |
CCCAACTATTGACATGTGCT+CGG | 0.574965 | tig0010571:+44626 | Msa1348840:CDS |
TTTATCTGAGCAAAGGATGA+CGG | 0.575426 | tig0010571:-45668 | None:intergenic |
CTCCCGCCTCACTTTCACCC+TGG | 0.576417 | tig0010571:-46894 | None:intergenic |
TGGTCGACGGGAGCCAAAGA+GGG | 0.577988 | tig0010571:+40508 | Msa1348840:CDS |
GCTTGTAAATCTGGTTGAGA+AGG | 0.578725 | tig0010571:+45781 | Msa1348840:CDS |
AGATCCATTTGCATTTGATG+AGG | 0.578867 | tig0010571:+44996 | Msa1348840:CDS |
CAATTAATTGCTGCCCATGG+AGG | 0.579731 | tig0010571:+45593 | Msa1348840:CDS |
GAAGGCTTCTTCGTTCTCAA+GGG | 0.581373 | tig0010571:+40729 | Msa1348840:CDS |
GAATTGTCATTCAGATCTGA+AGG | 0.585420 | tig0010571:+42870 | Msa1348840:CDS |
TGATATTGCGCCCTCTAAGT+GGG | 0.585660 | tig0010571:+45158 | Msa1348840:CDS |
CATCGCTGGCCATAAAGAAA+GGG | 0.587555 | tig0010571:-43732 | None:intergenic |
CATAGCCTCCAACCCTCCAT+GGG | 0.588009 | tig0010571:-45606 | None:intergenic |
AGACCCCTTTGCATTTGATG+AGG | 0.588194 | tig0010571:+45134 | Msa1348840:CDS |
GAAAGGAAAGTTGAGTCCTA+AGG | 0.588906 | tig0010571:+43449 | Msa1348840:CDS |
GTAAATCTGGTTGAGAAGGA+TGG | 0.589105 | tig0010571:+45785 | Msa1348840:CDS |
TCAGTTTACGAGAAGTACCC+CGG | 0.590409 | tig0010571:+44951 | Msa1348840:CDS |
GTATCAGTAGTTGATGTGCT+AGG | 0.592926 | tig0010571:-44679 | None:intergenic |
ATCCAGTTCAGAATCATCGC+TGG | 0.594748 | tig0010571:-43746 | None:intergenic |
AGCTTGTTATCAACGGACAC+AGG | 0.596570 | tig0010571:-43703 | None:intergenic |
GCATCTAACTGACCACGAGT+TGG | 0.597868 | tig0010571:+45733 | Msa1348840:CDS |
CAGTAGGAATTACAATGGTG+TGG | 0.598823 | tig0010571:+44561 | Msa1348840:CDS |
AGGCGAAATCGGGGTAGAGT+GGG | 0.599359 | tig0010571:-40409 | None:intergenic |
ATAAGAAGTTCACCTTTCCG+TGG | 0.602713 | tig0010571:-47300 | None:intergenic |
AATTAATTGCTGCCCATGGA+GGG | 0.603684 | tig0010571:+45594 | Msa1348840:CDS |
TGATCCCTTTGCATTTGATG+AGG | 0.604280 | tig0010571:+44858 | Msa1348840:CDS |
TTCAGAAGGCTTGGACCAGG+AGG | 0.605157 | tig0010571:+46825 | Msa1348840:CDS |
GATAGTAGGTCCCACTTAGA+GGG | 0.607332 | tig0010571:-45168 | None:intergenic |
AAGAGTATATGCGTTGAGAA+CGG | 0.610821 | tig0010571:-47973 | None:intergenic |
GTCAAGAAGAGTCAAGTGAT+GGG | 0.610912 | tig0010571:+45277 | Msa1348840:CDS |
GGCTAACCAGGGTGAAAGTG+AGG | 0.611463 | tig0010571:+46888 | Msa1348840:CDS |
ATTAGAAATTTAACACAACA+AGG | 0.611971 | tig0010571:-41905 | None:intergenic |
TACTTGTGTACAGAAACCTC+TGG | 0.614836 | tig0010571:+42766 | Msa1348840:intron |
CGGAGATCGGTGGTTTACGG+TGG | 0.618574 | tig0010571:-40262 | None:intergenic |
CCTCGAACTACTTAGGGACG+TGG | 0.619708 | tig0010571:-45058 | None:intergenic |
CATCTTCCAAGATTACAACC+GGG | 0.621126 | tig0010571:-45107 | None:intergenic |
TCACTTTAAGGAACGTACCC+CGG | 0.622558 | tig0010571:+45089 | Msa1348840:CDS |
ATACATACTCACTAAAGATG+AGG | 0.627563 | tig0010571:+44698 | Msa1348840:CDS |
ACTACTGCAAGAACCAGATG+TGG | 0.629778 | tig0010571:-44731 | None:intergenic |
AGTCTTCCGTACAGCACCAG+AGG | 0.630144 | tig0010571:-42782 | None:intergenic |
GATGATGGAGCAAAATGATG+AGG | 0.630944 | tig0010571:+40607 | Msa1348840:CDS |
ATCGTCGATTGAATTGGGGT+CGG | 0.632919 | tig0010571:-40474 | None:intergenic |
CAAAATCGTCGATTGAATTG+GGG | 0.633287 | tig0010571:-40478 | None:intergenic |
GGCGACGTCGACGTTGATGG+AGG | 0.633323 | tig0010571:+40568 | Msa1348840:CDS |
GACCAGAGTTATGCCCAAAG+TGG | 0.635018 | tig0010571:+42143 | Msa1348840:CDS |
GGAATTACAATGGTGTGGAG+AGG | 0.637221 | tig0010571:+44566 | Msa1348840:CDS |
ACCACAAATCTGTCCAACAC+AGG | 0.637664 | tig0010571:-47462 | None:intergenic |
TAACCAGGGTGAAAGTGAGG+CGG | 0.641799 | tig0010571:+46891 | Msa1348840:CDS |
TGTCAATTAATTGCTGCCCA+TGG | 0.645816 | tig0010571:+45590 | Msa1348840:CDS |
GATTGTCAGCAATTGCTGCA+CGG | 0.645862 | tig0010571:-47410 | None:intergenic |
GTTATCAACGGACACAGGAG+AGG | 0.648725 | tig0010571:-43698 | None:intergenic |
TGAAGAAGGAAGTAGAACAC+TGG | 0.658167 | tig0010571:-46806 | None:intergenic |
ATACCTTGACAGCAGTAAGG+AGG | 0.658288 | tig0010571:-45362 | None:intergenic |
CAACGTGTCAGAATAACAGT+GGG | 0.658807 | tig0010571:+42113 | Msa1348840:CDS |
AGTTCCAGTAGGAATTACAA+TGG | 0.660824 | tig0010571:+44556 | Msa1348840:CDS |
TCAGCTTACGGAAAGTACCT+CGG | 0.663442 | tig0010571:+38201 | Msa1348840:five_prime_UTR |
GCATTTGATGAGGATGACAG+TGG | 0.664713 | tig0010571:+44868 | Msa1348840:CDS |
GCAACGTGTCAGAATAACAG+TGG | 0.667678 | tig0010571:+42112 | Msa1348840:CDS |
GCATCTCCGTATCACCAGCA+TGG | 0.672316 | tig0010571:-48007 | None:intergenic |
TATCTTCCAAGATTACAACC+GGG | 0.672434 | tig0010571:-44969 | None:intergenic |
ATCTTCCAAGATCGCAACCG+AGG | 0.673016 | tig0010571:-38218 | None:intergenic |
CAACAAGAAAATCCAACTCG+TGG | 0.673146 | tig0010571:-45745 | None:intergenic |
ATCGAAGAAAGACCACTGAG+AGG | 0.674356 | tig0010571:-40450 | None:intergenic |
GAGAAGAGAAGGCGAAATCG+GGG | 0.675031 | tig0010571:-40418 | None:intergenic |
CTATATCCATTAGTTCCAGT+AGG | 0.678113 | tig0010571:+44545 | Msa1348840:CDS |
CTAAGTGGGACCTACTATCG+GGG | 0.685030 | tig0010571:+45172 | Msa1348840:CDS |
ATCTTCCAAGATTACAACCG+GGG | 0.693882 | tig0010571:-45106 | None:intergenic |
TCAACCGATTCGAATCAGAA+GGG | 0.696369 | tig0010571:+40661 | Msa1348840:CDS |
ATCTTCCAAGATTACAACCG+GGG | 0.696587 | tig0010571:-44968 | None:intergenic |
GCATTTGATGAGGATGACAG+TGG | 0.696947 | tig0010571:+45006 | Msa1348840:CDS |
CATCCTCATCAAATGCAAAG+GGG | 0.707305 | tig0010571:-45137 | None:intergenic |
ACAAATCCTAAAGCAAGACG+TGG | 0.707763 | tig0010571:-47885 | None:intergenic |
GGTGCTGTACGGAAGACTGG+TGG | 0.712043 | tig0010571:+42787 | Msa1348840:CDS |
CAGCTCCGTAAAAGACAATG+GGG | 0.716546 | tig0010571:-43475 | None:intergenic |
TATCTTCCAAGACTACAACA+GGG | 0.759615 | tig0010571:-44831 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCTTTTATGTTTTTTTATT+AGG | - | tig0010571:39457-39476 | None:intergenic | 10.0% |
!! | AATAATTAATAATATATGCA+AGG | + | tig0010571:39657-39676 | Msa1348840:intron | 10.0% |
!!! | ATAATATTTACTTTTTTTTG+TGG | + | tig0010571:39771-39790 | Msa1348840:intron | 10.0% |
!!! | AAAATTTTGAATTTTGAATT+TGG | + | tig0010571:40860-40879 | Msa1348840:intron | 10.0% |
!!! | AAATTTTGAATTTTGAATTT+GGG | + | tig0010571:40861-40880 | Msa1348840:intron | 10.0% |
!!! | ATTTAATAATTTTCAATATC+AGG | - | tig0010571:42428-42447 | None:intergenic | 10.0% |
!! | TATTAAATTTCATAATTTGA+TGG | + | tig0010571:42440-42459 | Msa1348840:intron | 10.0% |
!!! | TAAAAAAAACATTTTATAAG+TGG | - | tig0010571:43271-43290 | None:intergenic | 10.0% |
!!! | TTGTTTAATAATTTTATTCT+CGG | + | tig0010571:43570-43589 | Msa1348840:intron | 10.0% |
!! | TTATCATTAAATAAATCAAA+TGG | - | tig0010571:46449-46468 | None:intergenic | 10.0% |
!! | AATGAACAAAAAAATTAAAA+GGG | - | tig0010571:47708-47727 | None:intergenic | 10.0% |
!! | TATACAAAAAAAATAATAGT+AGG | + | tig0010571:48033-48052 | Msa1348840:three_prime_UTR | 10.0% |
!! | AAAAAAAAAATTACAACTAT+TGG | - | tig0010571:48091-48110 | None:intergenic | 10.0% |
!!! | TTAATAAGTAGTTTTGTAAT+TGG | + | tig0010571:39271-39290 | Msa1348840:intron | 15.0% |
!! | AAAAGATAAATATTTACGTT+TGG | + | tig0010571:39470-39489 | Msa1348840:intron | 15.0% |
!!! | TTTCTTTTTTCCAATTTTAT+CGG | - | tig0010571:39537-39556 | None:intergenic | 15.0% |
!!! | AAAAGTTTGTTTTTTTTTTG+AGG | + | tig0010571:39868-39887 | Msa1348840:intron | 15.0% |
!!! | GATTATTATGCTTTATTTAT+AGG | + | tig0010571:41030-41049 | Msa1348840:intron | 15.0% |
!!! | TTAACTAATGATAAGTTTTT+TGG | + | tig0010571:41207-41226 | Msa1348840:intron | 15.0% |
!!! | GATTGAAAATCTATTTTTTA+GGG | - | tig0010571:41345-41364 | None:intergenic | 15.0% |
!!! | TTTTTTTGAATGTTATGTTA+TGG | + | tig0010571:42737-42756 | Msa1348840:intron | 15.0% |
!!! | TTTTTTGAATGTTATGTTAT+GGG | + | tig0010571:42738-42757 | Msa1348840:intron | 15.0% |
!! | TAAAATTATTAAACAAGGAA+AGG | - | tig0010571:43566-43585 | None:intergenic | 15.0% |
!! | GAGAATAAAATTATTAAACA+AGG | - | tig0010571:43571-43590 | None:intergenic | 15.0% |
!! | ATCTAGAAAATAAAAGTTAT+TGG | - | tig0010571:43659-43678 | None:intergenic | 15.0% |
!!! | AGTTTTAAACATCAATATTT+CGG | + | tig0010571:46512-46531 | Msa1348840:intron | 15.0% |
!! | AAGAATTCTAACTAAAAAAT+TGG | - | tig0010571:46961-46980 | None:intergenic | 15.0% |
!! | AAAGCAAAAATTTAAACAAA+AGG | - | tig0010571:47338-47357 | None:intergenic | 15.0% |
!! | ATGAACAAAAAAATTAAAAG+GGG | - | tig0010571:47707-47726 | None:intergenic | 15.0% |
!! | GAATGAACAAAAAAATTAAA+AGG | - | tig0010571:47709-47728 | None:intergenic | 15.0% |
!! | TGACGATTTAAATAAAAATG+AGG | + | tig0010571:38412-38431 | Msa1348840:intron | 20.0% |
!! | GTATGTGAATGTTTAAAAAT+GGG | + | tig0010571:38434-38453 | Msa1348840:intron | 20.0% |
!!! | AACTAGTGTTTTTTATCAAT+AGG | - | tig0010571:39245-39264 | None:intergenic | 20.0% |
!! | ATTATTCTTTGACAAAATGA+GGG | - | tig0010571:39749-39768 | None:intergenic | 20.0% |
!! | AATTATTCTTTGACAAAATG+AGG | - | tig0010571:39750-39769 | None:intergenic | 20.0% |
!!! | ATATTTACTTTTTTTTGTGG+TGG | + | tig0010571:39774-39793 | Msa1348840:intron | 20.0% |
!!! | ACAAAATAAACTTTTTTGCA+AGG | - | tig0010571:39831-39850 | None:intergenic | 20.0% |
!! | AAATCAAAAGCTGAAAATAA+CGG | + | tig0010571:39965-39984 | Msa1348840:intron | 20.0% |
!! | ACAAAAAGAAAAAGAAGAAT+GGG | - | tig0010571:40171-40190 | None:intergenic | 20.0% |
!! | AACAAAAAGAAAAAGAAGAA+TGG | - | tig0010571:40172-40191 | None:intergenic | 20.0% |
!!! | TTAGTTTCTTTGTTTTAGAT+TGG | + | tig0010571:40927-40946 | Msa1348840:intron | 20.0% |
!!! | ATTATGCTTTATTTATAGGA+TGG | + | tig0010571:41034-41053 | Msa1348840:intron | 20.0% |
!! | ACTAGTTAAAATGTAGAAAA+GGG | - | tig0010571:41129-41148 | None:intergenic | 20.0% |
!!! | CGATTGAAAATCTATTTTTT+AGG | - | tig0010571:41346-41365 | None:intergenic | 20.0% |
!! | AAAGCAAAACTAATATTGTT+GGG | + | tig0010571:41455-41474 | Msa1348840:intron | 20.0% |
!! | AACAAATGGAAAAATAATTG+TGG | - | tig0010571:41504-41523 | None:intergenic | 20.0% |
!! | AAAAAATTATAACTTGGACA+CGG | - | tig0010571:41627-41646 | None:intergenic | 20.0% |
!! | ATTAGAAATTTAACACAACA+AGG | - | tig0010571:41908-41927 | None:intergenic | 20.0% |
!! | AATGATACAAGCAAAAAAAA+AGG | - | tig0010571:42241-42260 | None:intergenic | 20.0% |
!!! | AATAATTTTCAATATCAGGA+TGG | - | tig0010571:42424-42443 | None:intergenic | 20.0% |
!! | TGTTAATTCTTAACTTATAG+AGG | + | tig0010571:42472-42491 | Msa1348840:intron | 20.0% |
!! | GTTAATTCTTAACTTATAGA+GGG | + | tig0010571:42473-42492 | Msa1348840:intron | 20.0% |
!!! | GTTTTAGATTAATTTATGTG+CGG | - | tig0010571:42525-42544 | None:intergenic | 20.0% |
!! | TAATTTGAATTATTTGCATG+TGG | - | tig0010571:42591-42610 | None:intergenic | 20.0% |
!!! | TTTTTGAATGTTATGTTATG+GGG | + | tig0010571:42739-42758 | Msa1348840:intron | 20.0% |
!!! | CAATTTTAAGGAAAAACTAA+GGG | + | tig0010571:42810-42829 | Msa1348840:CDS | 20.0% |
!! | AATTGATATAGTCTATAACA+GGG | + | tig0010571:42967-42986 | Msa1348840:intron | 20.0% |
!!! | TTTTTCATTTCTCAAATCTT+TGG | - | tig0010571:43153-43172 | None:intergenic | 20.0% |
!!! | GATTTTATTAGCTTACTTTT+CGG | + | tig0010571:43600-43619 | Msa1348840:intron | 20.0% |
!!! | ATTGCTTCAATTGTTTTTTT+AGG | + | tig0010571:43922-43941 | Msa1348840:intron | 20.0% |
!! | AGTCAATAAAATCAAATCAA+GGG | - | tig0010571:44217-44236 | None:intergenic | 20.0% |
!!! | AATCTGTGATTTTAATCTAA+TGG | - | tig0010571:44283-44302 | None:intergenic | 20.0% |
!!! | ATGACTATTTTAACTTTTAG+AGG | - | tig0010571:44426-44445 | None:intergenic | 20.0% |
!! | TCTAAAAGTTAAAATAGTCA+TGG | + | tig0010571:44425-44444 | Msa1348840:intron | 20.0% |
!!! | AACTCATTCTAAAAAACATA+AGG | + | tig0010571:45206-45225 | Msa1348840:CDS | 20.0% |
!! | ACATTAACATAAATGATACA+TGG | - | tig0010571:45408-45427 | None:intergenic | 20.0% |
!! | AATGTCTTCTCATAAAATTA+TGG | + | tig0010571:45423-45442 | Msa1348840:intron | 20.0% |
!!! | GAACTAATGATGTTTTTTTT+TGG | + | tig0010571:45853-45872 | Msa1348840:intron | 20.0% |
!!! | TAAGATTTTAGTGTTCTTTT+TGG | + | tig0010571:45902-45921 | Msa1348840:intron | 20.0% |
!! | ATCCATAACATATTAAGAAA+TGG | - | tig0010571:46191-46210 | None:intergenic | 20.0% |
!! | AGTCTCTATTTATCTTTATA+TGG | + | tig0010571:46254-46273 | Msa1348840:intron | 20.0% |
!!! | AAATCAAATGGATTAAGAAT+GGG | - | tig0010571:46437-46456 | None:intergenic | 20.0% |
!!! | TAAATCAAATGGATTAAGAA+TGG | - | tig0010571:46438-46457 | None:intergenic | 20.0% |
!! | ACATGATTAAAAAAAGGTTA+TGG | - | tig0010571:46490-46509 | None:intergenic | 20.0% |
!! | AACTGTACATGATTAAAAAA+AGG | - | tig0010571:46496-46515 | None:intergenic | 20.0% |
!! | TAAATCAAAGAGATTAAGAA+AGG | - | tig0010571:46641-46660 | None:intergenic | 20.0% |
!!! | ATTATTATGCTCTATTTTCT+TGG | + | tig0010571:46867-46886 | Msa1348840:CDS | 20.0% |
!! | ATAGAATTACTACTTTGATT+TGG | + | tig0010571:47063-47082 | Msa1348840:intron | 20.0% |
!! | ATAAGTAAACACAAGATTAA+GGG | - | tig0010571:47188-47207 | None:intergenic | 20.0% |
!! | CAAAAAAAATAATAGTAGGA+TGG | + | tig0010571:48037-48056 | Msa1348840:three_prime_UTR | 20.0% |
! | AAAGTGGAAAAACATTTAGA+CGG | + | tig0010571:38378-38397 | Msa1348840:intron | 25.0% |
! | GGTATGTGAATGTTTAAAAA+TGG | + | tig0010571:38433-38452 | Msa1348840:intron | 25.0% |
!!! | TTGATTTGTAAAGCTAATGA+CGG | - | tig0010571:38507-38526 | None:intergenic | 25.0% |
! | TTATACCTAAAGAAAAGAAG+AGG | - | tig0010571:38577-38596 | None:intergenic | 25.0% |
! | AATCCCATAAACTTTAGATA+TGG | + | tig0010571:38596-38615 | Msa1348840:intron | 25.0% |
!! | GTACCATATCTAAAGTTTAT+GGG | - | tig0010571:38602-38621 | None:intergenic | 25.0% |
!!! | ACAATGTTTTGATGAAATAG+TGG | - | tig0010571:38855-38874 | None:intergenic | 25.0% |
! | AACCGACACTTAATTTAAAA+CGG | - | tig0010571:39211-39230 | None:intergenic | 25.0% |
! | TTTATCAATAGGAGAACAAA+AGG | - | tig0010571:39234-39253 | None:intergenic | 25.0% |
! | AGATAAATATTTACGTTTGG+AGG | + | tig0010571:39473-39492 | Msa1348840:intron | 25.0% |
!!! | TTTTATCTAAAATGTCCCTT+CGG | + | tig0010571:39505-39524 | Msa1348840:intron | 25.0% |
! | ATTCTTCGATAAAAAATCTG+TGG | - | tig0010571:39717-39736 | None:intergenic | 25.0% |
! | GCAGTAACTACTTAATAATA+TGG | - | tig0010571:39925-39944 | None:intergenic | 25.0% |
!!! | ACAATAGTTGATGGAATTTT+GGG | + | tig0010571:41062-41081 | Msa1348840:CDS | 25.0% |
! | CACTAGTTAAAATGTAGAAA+AGG | - | tig0010571:41130-41149 | None:intergenic | 25.0% |
! | AAATGTAGAATCAAACAAGT+GGG | - | tig0010571:41264-41283 | None:intergenic | 25.0% |
! | TTGTTTGATTCTACATTTGA+AGG | + | tig0010571:41266-41285 | Msa1348840:intron | 25.0% |
! | AATATTTCAGTACCAAGATT+TGG | + | tig0010571:41296-41315 | Msa1348840:intron | 25.0% |
! | CAAAGCAAAACTAATATTGT+TGG | + | tig0010571:41454-41473 | Msa1348840:intron | 25.0% |
!!! | ATAATTGTGGACTGTAATTT+TGG | - | tig0010571:41491-41510 | None:intergenic | 25.0% |
!! | TTCCAATTTTGTCATTCAAA+TGG | - | tig0010571:41539-41558 | None:intergenic | 25.0% |
! | AGCATAGACAGTAAAAATAA+GGG | - | tig0010571:41848-41867 | None:intergenic | 25.0% |
! | AAGCATAGACAGTAAAAATA+AGG | - | tig0010571:41849-41868 | None:intergenic | 25.0% |
! | TACAATTAACTAGAACTTCT+TGG | - | tig0010571:42081-42100 | None:intergenic | 25.0% |
!! | AGTAAAGAGATTTTGTAATC+AGG | + | tig0010571:42362-42381 | Msa1348840:intron | 25.0% |
! | TTTCATAATTTGATGGAATC+TGG | + | tig0010571:42447-42466 | Msa1348840:intron | 25.0% |
! | ACATGTAAATTATGTTCTCT+TGG | + | tig0010571:42556-42575 | Msa1348840:intron | 25.0% |
!! | TTTTGAATGTTATGTTATGG+GGG | + | tig0010571:42740-42759 | Msa1348840:intron | 25.0% |
!!! | GCAATTTTAAGGAAAAACTA+AGG | + | tig0010571:42809-42828 | Msa1348840:CDS | 25.0% |
! | GAATTGATATAGTCTATAAC+AGG | + | tig0010571:42966-42985 | Msa1348840:intron | 25.0% |
!! | AATTCTGAAAGACAAATTCA+TGG | - | tig0010571:43106-43125 | None:intergenic | 25.0% |
! | ATTTGTCTTTCAGAATTGTA+AGG | + | tig0010571:43109-43128 | Msa1348840:intron | 25.0% |
! | ATAAAAGATTTGCAGTGATT+TGG | - | tig0010571:43873-43892 | None:intergenic | 25.0% |
!! | TCTTATCTTTTCTTCTAGAT+AGG | + | tig0010571:43895-43914 | Msa1348840:intron | 25.0% |
!!! | CTTCAATTGTTTTTTTAGGT+GGG | + | tig0010571:43926-43945 | Msa1348840:intron | 25.0% |
!!! | TGTTAATTCATTTTTACTCC+AGG | + | tig0010571:44113-44132 | Msa1348840:intron | 25.0% |
!!! | GTTAATTCATTTTTACTCCA+GGG | + | tig0010571:44114-44133 | Msa1348840:intron | 25.0% |
! | GAGTCAATAAAATCAAATCA+AGG | - | tig0010571:44218-44237 | None:intergenic | 25.0% |
!!! | TTTGATTTTATTGACTCTGT+TGG | + | tig0010571:44221-44240 | Msa1348840:intron | 25.0% |
! | AAATCACAGATTGTTTATTC+AGG | + | tig0010571:44291-44310 | Msa1348840:intron | 25.0% |
! | AATCACAGATTGTTTATTCA+GGG | + | tig0010571:44292-44311 | Msa1348840:intron | 25.0% |
! | TTAGCATAACCCAAATAATT+CGG | - | tig0010571:44385-44404 | None:intergenic | 25.0% |
!! | GCATACATAAAGTTTTTCTT+CGG | + | tig0010571:44480-44499 | Msa1348840:intron | 25.0% |
! | GTTAGAATTCTTAATAGAAG+AGG | - | tig0010571:44593-44612 | None:intergenic | 25.0% |
!! | ATTTTCTTTTATCTGAGCAA+AGG | - | tig0010571:45678-45697 | None:intergenic | 25.0% |
! | TTAAATTTGAACAGTTGTAC+AGG | + | tig0010571:45944-45963 | Msa1348840:intron | 25.0% |
! | CTCCATTTCTTAATATGTTA+TGG | + | tig0010571:46186-46205 | Msa1348840:intron | 25.0% |
! | GAAATATTGAAAGAAGTTCT+GGG | - | tig0010571:46407-46426 | None:intergenic | 25.0% |
! | TGAAATATTGAAAGAAGTTC+TGG | - | tig0010571:46408-46427 | None:intergenic | 25.0% |
! | GGAAGATAAAAAATTTGAAC+TGG | + | tig0010571:46921-46940 | Msa1348840:CDS | 25.0% |
! | GTTACAAATATACTGCTTTA+AGG | - | tig0010571:47107-47126 | None:intergenic | 25.0% |
! | ATTAAGTGACATAAGCAAAT+CGG | - | tig0010571:47138-47157 | None:intergenic | 25.0% |
! | CATAAGTAAACACAAGATTA+AGG | - | tig0010571:47189-47208 | None:intergenic | 25.0% |
! | AGCAAATAATTTCATCAACA+TGG | - | tig0010571:47521-47540 | None:intergenic | 25.0% |
ATTCTTCCTCAAACTACTTA+GGG | - | tig0010571:38317-38336 | None:intergenic | 30.0% | |
AAGTGGAAAAACATTTAGAC+GGG | + | tig0010571:38379-38398 | Msa1348840:intron | 30.0% | |
TAGATTATCCACCTTAACTT+GGG | - | tig0010571:38532-38551 | None:intergenic | 30.0% | |
TTAGATTATCCACCTTAACT+TGG | - | tig0010571:38533-38552 | None:intergenic | 30.0% | |
TAAAGAAAAGAAGAGGAAAG+AGG | - | tig0010571:38570-38589 | None:intergenic | 30.0% | |
! | TCTTTCCTCTTCTTTTCTTT+AGG | + | tig0010571:38569-38588 | Msa1348840:intron | 30.0% |
! | GGTACCATATCTAAAGTTTA+TGG | - | tig0010571:38603-38622 | None:intergenic | 30.0% |
ATTGTTAACACTTCAAGACA+GGG | - | tig0010571:38672-38691 | None:intergenic | 30.0% | |
AATTGTTAACACTTCAAGAC+AGG | - | tig0010571:38673-38692 | None:intergenic | 30.0% | |
AGTGTTAACAATTAAACTCG+AGG | + | tig0010571:38680-38699 | Msa1348840:intron | 30.0% | |
ATACCTTTCTTGAAACATCA+AGG | + | tig0010571:38706-38725 | Msa1348840:intron | 30.0% | |
TACCTTTCTTGAAACATCAA+GGG | + | tig0010571:38707-38726 | Msa1348840:intron | 30.0% | |
! | TTAGTGCTATTAAAACCCAA+GGG | - | tig0010571:38771-38790 | None:intergenic | 30.0% |
TTTCCAACGAATGAATTGAA+TGG | - | tig0010571:39082-39101 | None:intergenic | 30.0% | |
!! | CTCCGTTTTAAATTAAGTGT+CGG | + | tig0010571:39206-39225 | Msa1348840:intron | 30.0% |
GAACTCACATATTTCAAATG+TGG | + | tig0010571:39293-39312 | Msa1348840:intron | 30.0% | |
GCATAATATATACATGAGCT+GGG | - | tig0010571:39351-39370 | None:intergenic | 30.0% | |
TGCATAATATATACATGAGC+TGG | - | tig0010571:39352-39371 | None:intergenic | 30.0% | |
TTCACGAAAAAAACCCTTAT+TGG | + | tig0010571:39388-39407 | Msa1348840:intron | 30.0% | |
CATGTGTACAAAACCAATAA+GGG | - | tig0010571:39404-39423 | None:intergenic | 30.0% | |
! | TTTATCTAAAATGTCCCTTC+GGG | + | tig0010571:39506-39525 | Msa1348840:intron | 30.0% |
! | AAGAAGAATGGGAAATTTTC+AGG | - | tig0010571:40160-40179 | None:intergenic | 30.0% |
TATGTCGATGAATTTGGATT+TGG | - | tig0010571:40231-40250 | None:intergenic | 30.0% | |
AAAAACGCATCCACAAAAAA+CGG | + | tig0010571:40533-40552 | Msa1348840:CDS | 30.0% | |
GATTGAATTCACTCTCATAT+AGG | + | tig0010571:40970-40989 | Msa1348840:intron | 30.0% | |
!!! | GACAATAGTTGATGGAATTT+TGG | + | tig0010571:41061-41080 | Msa1348840:CDS | 30.0% |
TTACAGTATAACATTCATCC+TGG | - | tig0010571:41185-41204 | None:intergenic | 30.0% | |
AATGTAGAATCAAACAAGTG+GGG | - | tig0010571:41263-41282 | None:intergenic | 30.0% | |
CAAATGTAGAATCAAACAAG+TGG | - | tig0010571:41265-41284 | None:intergenic | 30.0% | |
TGATTCTGAGTTGTAAAGAA+CGG | + | tig0010571:41370-41389 | Msa1348840:intron | 30.0% | |
GTCCATTTGAATGACAAAAT+TGG | + | tig0010571:41534-41553 | Msa1348840:intron | 30.0% | |
! | TTGATAGTTGTGGATACAAT+TGG | - | tig0010571:41944-41963 | None:intergenic | 30.0% |
TTCTTTACCATCAAGAGAAA+TGG | - | tig0010571:42206-42225 | None:intergenic | 30.0% | |
AAAAACAGCATTAGCATTAG+AGG | - | tig0010571:42300-42319 | None:intergenic | 30.0% | |
CATACTTCAATATTCTTCTG+TGG | + | tig0010571:42648-42667 | Msa1348840:intron | 30.0% | |
TAACTGCACATATTATCCTA+TGG | + | tig0010571:42677-42696 | Msa1348840:intron | 30.0% | |
AAATACAAAAGAATTGGCGA+TGG | - | tig0010571:43050-43069 | None:intergenic | 30.0% | |
GGATGCAAATACAAAAGAAT+TGG | - | tig0010571:43056-43075 | None:intergenic | 30.0% | |
! | TAGCATTTTCCATTATCTTC+AGG | - | tig0010571:43208-43227 | None:intergenic | 30.0% |
! | TGATTTAATTTCCATTGCCT+TGG | + | tig0010571:43291-43310 | Msa1348840:intron | 30.0% |
! | TTTTTGATGCATTTGTAGCT+TGG | + | tig0010571:43362-43381 | Msa1348840:intron | 30.0% |
ATTGTCATTAAAATGCTCTC+AGG | + | tig0010571:43504-43523 | Msa1348840:CDS | 30.0% | |
!! | TTATTAGCTTACTTTTCGGT+TGG | + | tig0010571:43604-43623 | Msa1348840:intron | 30.0% |
!! | GTCATTAAGCTTGTTATCAA+CGG | - | tig0010571:43713-43732 | None:intergenic | 30.0% |
GATCAGTTAAGAGACTATAA+AGG | + | tig0010571:43766-43785 | Msa1348840:CDS | 30.0% | |
! | GGTACTAGATTTTTATAAGC+TGG | + | tig0010571:43787-43806 | Msa1348840:intron | 30.0% |
!!! | GCTTCAATTGTTTTTTTAGG+TGG | + | tig0010571:43925-43944 | Msa1348840:intron | 30.0% |
TTGCATGTTAATGAAAAGAC+AGG | - | tig0010571:43969-43988 | None:intergenic | 30.0% | |
ATTACTGAGGTATATGTACT+TGG | + | tig0010571:44018-44037 | Msa1348840:intron | 30.0% | |
AGTGAAAAAATAAACACGCA+TGG | + | tig0010571:44053-44072 | Msa1348840:intron | 30.0% | |
GTGAAAAAATAAACACGCAT+GGG | + | tig0010571:44054-44073 | Msa1348840:intron | 30.0% | |
TAGCATAACCCAAATAATTC+GGG | - | tig0010571:44384-44403 | None:intergenic | 30.0% | |
TCATTCTCTGCAAATTCAAA+TGG | - | tig0010571:44523-44542 | None:intergenic | 30.0% | |
!! | ATAGTTGGGTTTTATGAGAA+AGG | - | tig0010571:44615-44634 | None:intergenic | 30.0% |
ATACATACTCACTAAAGATG+AGG | + | tig0010571:44698-44717 | Msa1348840:CDS | 30.0% | |
! | ATTCTTCCTGGAACTATTTT+GGG | - | tig0010571:44791-44810 | None:intergenic | 30.0% |
AAGAATGTTCACTTTACTGA+AGG | + | tig0010571:44805-44824 | Msa1348840:CDS | 30.0% | |
! | ATTCTTCCTGGAACTATTTT+GGG | - | tig0010571:44791-44810 | None:intergenic | 30.0% |
CAATTAATTGACAGCCAATA+GGG | - | tig0010571:45583-45602 | None:intergenic | 30.0% | |
AAATTCCTTGAGAACTGAAA+AGG | + | tig0010571:45694-45713 | Msa1348840:CDS | 30.0% | |
!! | GATTTTCTTGTTGCTATTCT+GGG | + | tig0010571:45755-45774 | Msa1348840:CDS | 30.0% |
!! | TTAGTGTTCTTTTTGGTCTT+AGG | + | tig0010571:45909-45928 | Msa1348840:intron | 30.0% |
AAAGAAGTTAACAGAATGGT+TGG | - | tig0010571:46071-46090 | None:intergenic | 30.0% | |
TGACAAAGAAGTTAACAGAA+TGG | - | tig0010571:46075-46094 | None:intergenic | 30.0% | |
ACAGTACAATATAACGAGAT+AGG | - | tig0010571:46728-46747 | None:intergenic | 30.0% | |
! | TTCTTGTTTCACACATTGTT+TGG | + | tig0010571:46976-46995 | Msa1348840:intron | 30.0% |
! | TCTTGTTTCACACATTGTTT+GGG | + | tig0010571:46977-46996 | Msa1348840:intron | 30.0% |
TTAAGTGACATAAGCAAATC+GGG | - | tig0010571:47137-47156 | None:intergenic | 30.0% | |
! | GATTTGCTTATGTCACTTAA+TGG | + | tig0010571:47137-47156 | Msa1348840:intron | 30.0% |
GATTAAGGGATATTCATCAA+GGG | - | tig0010571:47174-47193 | None:intergenic | 30.0% | |
AGATTAAGGGATATTCATCA+AGG | - | tig0010571:47175-47194 | None:intergenic | 30.0% | |
TTGCTTTGTCGCATATATTA+AGG | + | tig0010571:47351-47370 | Msa1348840:intron | 30.0% | |
TGCTTTGTCGCATATATTAA+GGG | + | tig0010571:47352-47371 | Msa1348840:intron | 30.0% | |
TTTAATCATAATAGACGCCT+GGG | + | tig0010571:47678-47697 | Msa1348840:intron | 30.0% | |
!!! | CTTATTTTATATCACCATGC+TGG | + | tig0010571:47993-48012 | Msa1348840:three_prime_UTR | 30.0% |
TCATCCTCATCAAATGCAAA+TGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
CATTCTTCCTCAAACTACTT+AGG | - | tig0010571:38318-38337 | None:intergenic | 35.0% | |
ACAAATCAACACCCAAGTTA+AGG | + | tig0010571:38518-38537 | Msa1348840:intron | 35.0% | |
TGTTATGATGGTCCTGTTAT+GGG | - | tig0010571:38641-38660 | None:intergenic | 35.0% | |
ATGTTATGATGGTCCTGTTA+TGG | - | tig0010571:38642-38661 | None:intergenic | 35.0% | |
AGGGAGAAATCATGTTATGA+TGG | - | tig0010571:38653-38672 | None:intergenic | 35.0% | |
GTTAACAATTAAACTCGAGG+AGG | + | tig0010571:38683-38702 | Msa1348840:intron | 35.0% | |
AACCCTTGATGTTTCAAGAA+AGG | - | tig0010571:38712-38731 | None:intergenic | 35.0% | |
! | GTTAGTGCTATTAAAACCCA+AGG | - | tig0010571:38772-38791 | None:intergenic | 35.0% |
AGAAACACAAGAGTAAACTG+CGG | - | tig0010571:39059-39078 | None:intergenic | 35.0% | |
TCTCCATTCAATTCATTCGT+TGG | + | tig0010571:39076-39095 | Msa1348840:intron | 35.0% | |
! | CGACACTTAATTTAAAACGG+AGG | - | tig0010571:39208-39227 | None:intergenic | 35.0% |
AAGTTGAGAGTGAGATGTTT+GGG | + | tig0010571:39318-39337 | Msa1348840:intron | 35.0% | |
GCATGTGTACAAAACCAATA+AGG | - | tig0010571:39405-39424 | None:intergenic | 35.0% | |
! | TTATCTAAAATGTCCCTTCG+GGG | + | tig0010571:39507-39526 | Msa1348840:intron | 35.0% |
TATATGCAAGGTCATATGCA+AGG | + | tig0010571:39669-39688 | Msa1348840:intron | 35.0% | |
CTTCGATAAAAAATCTGTGG+TGG | - | tig0010571:39714-39733 | None:intergenic | 35.0% | |
! | TGACAAAATGAGGGCTTTTT+GGG | - | tig0010571:39740-39759 | None:intergenic | 35.0% |
! | TTGACAAAATGAGGGCTTTT+TGG | - | tig0010571:39741-39760 | None:intergenic | 35.0% |
!!! | TTACTTTTTTTTGTGGTGGC+CGG | + | tig0010571:39778-39797 | Msa1348840:intron | 35.0% |
! | TTTTTGCAAGGTCATATGCA+AGG | - | tig0010571:39819-39838 | None:intergenic | 35.0% |
! | CAGTGTAGTGTTTTTCTAAC+TGG | - | tig0010571:40022-40041 | None:intergenic | 35.0% |
! | GTGTGCAATTTTGAATCTGT+GGG | - | tig0010571:40046-40065 | None:intergenic | 35.0% |
! | TGTGTGCAATTTTGAATCTG+TGG | - | tig0010571:40047-40066 | None:intergenic | 35.0% |
!!! | ATCATTTTGGAATCGGAGAT+CGG | - | tig0010571:40278-40297 | None:intergenic | 35.0% |
!!! | GCGAACAATCATTTTGGAAT+CGG | - | tig0010571:40285-40304 | None:intergenic | 35.0% |
! | GTATGTGCGAACAATCATTT+TGG | - | tig0010571:40291-40310 | None:intergenic | 35.0% |
! | CAAAATCGTCGATTGAATTG+GGG | - | tig0010571:40481-40500 | None:intergenic | 35.0% |
! | CCAAAATCGTCGATTGAATT+GGG | - | tig0010571:40482-40501 | None:intergenic | 35.0% |
! | ACCAAAATCGTCGATTGAAT+TGG | - | tig0010571:40483-40502 | None:intergenic | 35.0% |
!!! | TCAATCGACGATTTTGGTTA+CGG | + | tig0010571:40485-40504 | Msa1348840:CDS | 35.0% |
!!! | ATACGAGAATCCGTTTTTTG+TGG | - | tig0010571:40546-40565 | None:intergenic | 35.0% |
! | AAAAAACGGATTCTCGTATC+CGG | + | tig0010571:40547-40566 | Msa1348840:CDS | 35.0% |
CATCAGCTAAACATTCATAC+TGG | - | tig0010571:41003-41022 | None:intergenic | 35.0% | |
ATGGCAAAGACAATAGTTGA+TGG | + | tig0010571:41053-41072 | Msa1348840:CDS | 35.0% | |
TCGTTTGAGAAAGAAATTCC+AGG | + | tig0010571:41164-41183 | Msa1348840:intron | 35.0% | |
AATCTACACATGCCAAATCT+TGG | - | tig0010571:41311-41330 | None:intergenic | 35.0% | |
AGAACGGTGAAATTGATCTA+TGG | + | tig0010571:41386-41405 | Msa1348840:intron | 35.0% | |
GGACACTTATGGTAAACAAA+TGG | - | tig0010571:41518-41537 | None:intergenic | 35.0% | |
GTCATTCAAATGGACACTTA+TGG | - | tig0010571:41529-41548 | None:intergenic | 35.0% | |
!! | TTTCTGAAGTTATTGTCCAG+TGG | + | tig0010571:41759-41778 | Msa1348840:intron | 35.0% |
TTCTGTTCTGGTATTTGACT+TGG | + | tig0010571:41789-41808 | Msa1348840:intron | 35.0% | |
TAACACAACAAGGTGATTCA+AGG | - | tig0010571:41898-41917 | None:intergenic | 35.0% | |
! | TGCTTTGTCTTTGATAGTTG+TGG | - | tig0010571:41954-41973 | None:intergenic | 35.0% |
! | GACTCTAGAAAAAACTGCAA+CGG | - | tig0010571:42059-42078 | None:intergenic | 35.0% |
TCAGCAATGTTAACCACTTT+GGG | - | tig0010571:42159-42178 | None:intergenic | 35.0% | |
! | TTATCTGCCATTTCTCTTGA+TGG | + | tig0010571:42196-42215 | Msa1348840:CDS | 35.0% |
GAGGAATCAGATAACTAAGA+TGG | - | tig0010571:42281-42300 | None:intergenic | 35.0% | |
TACTTCTTCTCAGTTTCTGA+AGG | + | tig0010571:42396-42415 | Msa1348840:intron | 35.0% | |
ATTCGATACAGAAGTTCCAT+AGG | - | tig0010571:42696-42715 | None:intergenic | 35.0% | |
GAATTGTCATTCAGATCTGA+AGG | + | tig0010571:42870-42889 | Msa1348840:CDS | 35.0% | |
ACACATCTCAAAGCAAGAAA+TGG | - | tig0010571:43010-43029 | None:intergenic | 35.0% | |
TCTTAAGTGCCTGAAGATAA+TGG | + | tig0010571:43196-43215 | Msa1348840:CDS | 35.0% | |
! | TTTTCTAAGCAAAGACAACC+AGG | + | tig0010571:43229-43248 | Msa1348840:CDS | 35.0% |
ACTCATTTGCTTGGAATGAA+AGG | + | tig0010571:43432-43451 | Msa1348840:CDS | 35.0% | |
TCAGGTAATGATCATACACA+GGG | + | tig0010571:43522-43541 | Msa1348840:intron | 35.0% | |
TTATTGGCACAGATGAGAAA+GGG | - | tig0010571:43643-43662 | None:intergenic | 35.0% | |
GCTTAATGACCCTTTCTTTA+TGG | + | tig0010571:43723-43742 | Msa1348840:CDS | 35.0% | |
!! | AGATTTGCTAGAGTTCTATG+TGG | + | tig0010571:43840-43859 | Msa1348840:intron | 35.0% |
TATATGTACTTGGAAGAGGA+TGG | + | tig0010571:44028-44047 | Msa1348840:intron | 35.0% | |
ATATGTACTTGGAAGAGGAT+GGG | + | tig0010571:44029-44048 | Msa1348840:intron | 35.0% | |
AACGAAGAATATAAGAGGGA+AGG | + | tig0010571:44187-44206 | Msa1348840:intron | 35.0% | |
ACTTAGTCTCCCGAATTATT+TGG | + | tig0010571:44372-44391 | Msa1348840:intron | 35.0% | |
CTTAGTCTCCCGAATTATTT+GGG | + | tig0010571:44373-44392 | Msa1348840:intron | 35.0% | |
! | CTACTGGAACTAATGGATAT+AGG | - | tig0010571:44547-44566 | None:intergenic | 35.0% |
CTATATCCATTAGTTCCAGT+AGG | + | tig0010571:44545-44564 | Msa1348840:CDS | 35.0% | |
GTAATTCCTACTGGAACTAA+TGG | - | tig0010571:44554-44573 | None:intergenic | 35.0% | |
AGTTCCAGTAGGAATTACAA+TGG | + | tig0010571:44556-44575 | Msa1348840:CDS | 35.0% | |
! | CATTCTTCCTGGAACTATTT+TGG | - | tig0010571:44792-44811 | None:intergenic | 35.0% |
AGTAAAGTGAACATTCTTCC+TGG | - | tig0010571:44803-44822 | None:intergenic | 35.0% | |
TATCTTCCAAGACTACAACA+GGG | - | tig0010571:44834-44853 | None:intergenic | 35.0% | |
TCATCCTCATCAAATGCAAA+GGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
! | CATTCTTCCTGGAACTATTT+TGG | - | tig0010571:44792-44811 | None:intergenic | 35.0% |
TATCTTCCAAGATTACAACC+GGG | - | tig0010571:44972-44991 | None:intergenic | 35.0% | |
CTATCTTCCAAGATTACAAC+CGG | - | tig0010571:44973-44992 | None:intergenic | 35.0% | |
CATCAAATGCAAATGGATCT+TGG | - | tig0010571:44996-45015 | None:intergenic | 35.0% | |
AGATCCATTTGCATTTGATG+AGG | + | tig0010571:44996-45015 | Msa1348840:CDS | 35.0% | |
TCATCCTCATCAAATGCAAA+TGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
ATTCTTCCTCGAACTACTTA+GGG | - | tig0010571:45067-45086 | None:intergenic | 35.0% | |
GAGGAAGAATGTTCACTTTA+AGG | + | tig0010571:45077-45096 | Msa1348840:CDS | 35.0% | |
TCATCTTCCAAGATTACAAC+CGG | - | tig0010571:45111-45130 | None:intergenic | 35.0% | |
TCATCCTCATCAAATGCAAA+GGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
ATCATCCTCATCAAATGCAA+AGG | - | tig0010571:45142-45161 | None:intergenic | 35.0% | |
!!! | TTTTTTGTTTCCCCGATAGT+AGG | - | tig0010571:45185-45204 | None:intergenic | 35.0% |
! | TGACTCTTCTTGACTCATTT+TGG | - | tig0010571:45271-45290 | None:intergenic | 35.0% |
GTCATAACTTATGTCAGAAC+TGG | - | tig0010571:45316-45335 | None:intergenic | 35.0% | |
AAAATACCTTGACAGCAGTA+AGG | - | tig0010571:45368-45387 | None:intergenic | 35.0% | |
ACACTAACATAGAACACTGA+AGG | - | tig0010571:45487-45506 | None:intergenic | 35.0% | |
AAATACCTGTGTTGTCTTGT+AGG | + | tig0010571:45532-45551 | Msa1348840:intron | 35.0% | |
GCAATTAATTGACAGCCAAT+AGG | - | tig0010571:45584-45603 | None:intergenic | 35.0% | |
GCTATGTCTATGTTAATTGC+TGG | + | tig0010571:45623-45642 | Msa1348840:CDS | 35.0% | |
TTTATCTGAGCAAAGGATGA+CGG | - | tig0010571:45671-45690 | None:intergenic | 35.0% | |
AAAAGGACCATCTATGTGAT+AGG | + | tig0010571:45711-45730 | Msa1348840:CDS | 35.0% | |
TTAGATGCCTATCACATAGA+TGG | - | tig0010571:45721-45740 | None:intergenic | 35.0% | |
!! | GGATTTTCTTGTTGCTATTC+TGG | + | tig0010571:45754-45773 | Msa1348840:CDS | 35.0% |
GTCGTAACAGGTAATTTGAT+TGG | + | tig0010571:45807-45826 | Msa1348840:intron | 35.0% | |
!! | CAGGTAATTTGATTGGTTTC+TGG | + | tig0010571:45814-45833 | Msa1348840:intron | 35.0% |
!! | AATTTGATTGGTTTCTGGAC+TGG | + | tig0010571:45819-45838 | Msa1348840:intron | 35.0% |
CTGTTTCAACTTTCAACCTT+CGG | + | tig0010571:46218-46237 | Msa1348840:intron | 35.0% | |
ACTTGATGAGAAATTTCCGA+AGG | - | tig0010571:46237-46256 | None:intergenic | 35.0% | |
! | AAGAGCATAATTCAGAAGCA+CGG | - | tig0010571:46283-46302 | None:intergenic | 35.0% |
TTGCAAGATTTCACCTTCTT+TGG | + | tig0010571:46330-46349 | Msa1348840:intron | 35.0% | |
!! | ACCTTCTTTGGCTCTTTAAT+AGG | + | tig0010571:46342-46361 | Msa1348840:intron | 35.0% |
ACCTATTAAAGAGCCAAAGA+AGG | - | tig0010571:46346-46365 | None:intergenic | 35.0% | |
TTCGAAATACTGAGAGTTCA+TGG | - | tig0010571:46604-46623 | None:intergenic | 35.0% | |
TTCCCACTAAGCATAATCTT+TGG | + | tig0010571:46692-46711 | Msa1348840:intron | 35.0% | |
TGCCAAAGATTATGCTTAGT+GGG | - | tig0010571:46697-46716 | None:intergenic | 35.0% | |
ATGCCAAAGATTATGCTTAG+TGG | - | tig0010571:46698-46717 | None:intergenic | 35.0% | |
AAGAGTGACGAATCTTGAAT+GGG | - | tig0010571:46761-46780 | None:intergenic | 35.0% | |
! | TCTATTTTCTTGGCTAACCA+GGG | + | tig0010571:46877-46896 | Msa1348840:CDS | 35.0% |
!!! | GTATTCCTTTTTTGATGCGT+TGG | + | tig0010571:47015-47034 | Msa1348840:intron | 35.0% |
GCTCTTACTGTAGAACAAAA+GGG | - | tig0010571:47388-47407 | None:intergenic | 35.0% | |
TGCTCTTACTGTAGAACAAA+AGG | - | tig0010571:47389-47408 | None:intergenic | 35.0% | |
! | GATTTGTGGTAAGTAGCTTT+TGG | + | tig0010571:47475-47494 | Msa1348840:intron | 35.0% |
! | GATTTAAAACCGCATCTGAA+GGG | + | tig0010571:47635-47654 | Msa1348840:intron | 35.0% |
GGCGTCTATTATGATTAAAC+AGG | - | tig0010571:47677-47696 | None:intergenic | 35.0% | |
GTTTAATCATAATAGACGCC+TGG | + | tig0010571:47677-47696 | Msa1348840:intron | 35.0% | |
TTAATCATAATAGACGCCTG+GGG | + | tig0010571:47679-47698 | Msa1348840:intron | 35.0% | |
!! | CTAACAGTTTTATGAGTCTC+TGG | - | tig0010571:47808-47827 | None:intergenic | 35.0% |
TCATCGAGTCATGTAGAATA+CGG | + | tig0010571:47833-47852 | Msa1348840:CDS | 35.0% | |
GAATACGGTGAAAGATCAAA+TGG | + | tig0010571:47848-47867 | Msa1348840:exon | 35.0% | |
!! | TTTAGGATTTGTTGCTACTC+AGG | + | tig0010571:47896-47915 | Msa1348840:three_prime_UTR | 35.0% |
TGAGAACGGCATATAAAAGT+TGG | - | tig0010571:47962-47981 | None:intergenic | 35.0% | |
! | AAGAGTATATGCGTTGAGAA+CGG | - | tig0010571:47976-47995 | None:intergenic | 35.0% |
CATCAAATGCAAATGGATCC+TGG | - | tig0010571:38246-38265 | None:intergenic | 40.0% | |
GGATCCATTTGCATTTGATG+AGG | + | tig0010571:38246-38265 | Msa1348840:intron | 40.0% | |
CTCATAAGCGTGCAACAAAA+TGG | - | tig0010571:38348-38367 | None:intergenic | 40.0% | |
TTGTTGCACGCTTATGAGTT+TGG | + | tig0010571:38350-38369 | Msa1348840:intron | 40.0% | |
TGTTGCACGCTTATGAGTTT+GGG | + | tig0010571:38351-38370 | Msa1348840:intron | 40.0% | |
TATGAGTTTGGGTGTGAAAG+TGG | + | tig0010571:38362-38381 | Msa1348840:intron | 40.0% | |
!! | GACGGTAAAGAAGCGTTTAA+CGG | - | tig0010571:38489-38508 | None:intergenic | 40.0% |
AATCAACACCCAAGTTAAGG+TGG | + | tig0010571:38521-38540 | Msa1348840:intron | 40.0% | |
TTATGATGGTCCTGTTATGG+GGG | - | tig0010571:38639-38658 | None:intergenic | 40.0% | |
GTTATGATGGTCCTGTTATG+GGG | - | tig0010571:38640-38659 | None:intergenic | 40.0% | |
!!! | ATTGTTTTTTCCTCCTCCCT+TGG | + | tig0010571:38752-38771 | Msa1348840:intron | 40.0% |
!!! | TTGTTTTTTCCTCCTCCCTT+GGG | + | tig0010571:38753-38772 | Msa1348840:intron | 40.0% |
TTATAGGTTGTTGTCGGGTT+GGG | - | tig0010571:38930-38949 | None:intergenic | 40.0% | |
TCTGCTTATAGGTTGTTGTC+GGG | - | tig0010571:38935-38954 | None:intergenic | 40.0% | |
GTCTGCTTATAGGTTGTTGT+CGG | - | tig0010571:38936-38955 | None:intergenic | 40.0% | |
CAACAACCTATAAGCAGACA+AGG | + | tig0010571:38937-38956 | Msa1348840:intron | 40.0% | |
AAGAGTAAACTGCGGTTGTA+CGG | - | tig0010571:39051-39070 | None:intergenic | 40.0% | |
GTGTTCTTGCATTTCTTCCT+TGG | - | tig0010571:39148-39167 | None:intergenic | 40.0% | |
! | CAAGTTGAGAGTGAGATGTT+TGG | + | tig0010571:39317-39336 | Msa1348840:intron | 40.0% |
AGTTGAGAGTGAGATGTTTG+GGG | + | tig0010571:39319-39338 | Msa1348840:intron | 40.0% | |
GATAAAAAATCTGTGGTGGC+CGG | - | tig0010571:39710-39729 | None:intergenic | 40.0% | |
!!! | TACTTTTTTTTGTGGTGGCC+GGG | + | tig0010571:39779-39798 | Msa1348840:intron | 40.0% |
ACATACGATACGATACGATG+AGG | - | tig0010571:39997-40016 | None:intergenic | 40.0% | |
! | TTCCGGAAATTGATGGTTTG+CGG | - | tig0010571:40319-40338 | None:intergenic | 40.0% |
GAATACGTTCCGGAAATTGA+TGG | - | tig0010571:40326-40345 | None:intergenic | 40.0% | |
TTGAGAAGAGAAGGCGAAAT+CGG | - | tig0010571:40423-40442 | None:intergenic | 40.0% | |
GGAAGAATCTTGAGAAGAGA+AGG | - | tig0010571:40432-40451 | None:intergenic | 40.0% | |
! | CCCAATTCAATCGACGATTT+TGG | + | tig0010571:40479-40498 | Msa1348840:CDS | 40.0% |
!! | GATGATGGAGCAAAATGATG+AGG | + | tig0010571:40607-40626 | Msa1348840:CDS | 40.0% |
GAGGTTAATTTCGCTCTTGA+TGG | + | tig0010571:40626-40645 | Msa1348840:CDS | 40.0% | |
!! | ATTTCGCTCTTGATGGACTT+CGG | + | tig0010571:40633-40652 | Msa1348840:CDS | 40.0% |
!! | TCAACCGATTCGAATCAGAA+GGG | + | tig0010571:40661-40680 | Msa1348840:CDS | 40.0% |
TGTGTGTTGTGTCTCTTTGT+TGG | + | tig0010571:40828-40847 | Msa1348840:intron | 40.0% | |
GTGTGTTGTGTCTCTTTGTT+GGG | + | tig0010571:40829-40848 | Msa1348840:intron | 40.0% | |
TGTGTTGTGTCTCTTTGTTG+GGG | + | tig0010571:40830-40849 | Msa1348840:intron | 40.0% | |
! | GGAATTTTGAACTGAGTGCA+AGG | + | tig0010571:40948-40967 | Msa1348840:intron | 40.0% |
AGAACAGAACTATATGCCAC+TGG | - | tig0010571:41778-41797 | None:intergenic | 40.0% | |
! | AGTGGCATATAGTTCTGTTC+TGG | + | tig0010571:41777-41796 | Msa1348840:intron | 40.0% |
! | ACTGTCTATGCTTTTGTCTC+AGG | + | tig0010571:41856-41875 | Msa1348840:intron | 40.0% |
! | CTGTCTATGCTTTTGTCTCA+GGG | + | tig0010571:41857-41876 | Msa1348840:intron | 40.0% |
! | AAAGACAAAGCACCAAGTCT+TGG | + | tig0010571:41962-41981 | Msa1348840:CDS | 40.0% |
AGAAAAAACTGCAACGGAAC+TGG | - | tig0010571:42053-42072 | None:intergenic | 40.0% | |
CAACGTGTCAGAATAACAGT+GGG | + | tig0010571:42113-42132 | Msa1348840:CDS | 40.0% | |
GTCAGCAATGTTAACCACTT+TGG | - | tig0010571:42160-42179 | None:intergenic | 40.0% | |
! | GTGGTTAACATTGCTGACTA+TGG | + | tig0010571:42162-42181 | Msa1348840:CDS | 40.0% |
! | AACATTGCTGACTATGGAGA+AGG | + | tig0010571:42168-42187 | Msa1348840:CDS | 40.0% |
GGATAATATGTGCAGTTAGC+TGG | - | tig0010571:42675-42694 | None:intergenic | 40.0% | |
TACTTGTGTACAGAAACCTC+TGG | + | tig0010571:42766-42785 | Msa1348840:intron | 40.0% | |
! | GAAGACTGGTGGCAATTTTA+AGG | + | tig0010571:42798-42817 | Msa1348840:CDS | 40.0% |
AAGGAAAAACTAAGGGAGCA+TGG | + | tig0010571:42817-42836 | Msa1348840:CDS | 40.0% | |
ACATGCAAAATCCAAGGCAA+TGG | - | tig0010571:43305-43324 | None:intergenic | 40.0% | |
AGTCACACATGCAAAATCCA+AGG | - | tig0010571:43311-43330 | None:intergenic | 40.0% | |
TCGTTACAGACTCATTTGCT+TGG | + | tig0010571:43423-43442 | Msa1348840:intron | 40.0% | |
GAAAGGAAAGTTGAGTCCTA+AGG | + | tig0010571:43449-43468 | Msa1348840:CDS | 40.0% | |
TCAGCTCCGTAAAAGACAAT+GGG | - | tig0010571:43479-43498 | None:intergenic | 40.0% | |
ATCAGCTCCGTAAAAGACAA+TGG | - | tig0010571:43480-43499 | None:intergenic | 40.0% | |
CTCAGGTAATGATCATACAC+AGG | + | tig0010571:43521-43540 | Msa1348840:intron | 40.0% | |
CAGGTAATGATCATACACAG+GGG | + | tig0010571:43523-43542 | Msa1348840:intron | 40.0% | |
TCATACACAGGGGTAATTTC+TGG | + | tig0010571:43533-43552 | Msa1348840:intron | 40.0% | |
GTTATTGGCACAGATGAGAA+AGG | - | tig0010571:43644-43663 | None:intergenic | 40.0% | |
TTCTAGATCTATGTCTGCGT+CGG | + | tig0010571:43671-43690 | Msa1348840:intron | 40.0% | |
AATAAGCGCCATCACTCAAT+CGG | - | tig0010571:44001-44020 | None:intergenic | 40.0% | |
GAGGTATATGTACTTGGAAG+AGG | + | tig0010571:44024-44043 | Msa1348840:intron | 40.0% | |
AAAATAAACACGCATGGGTG+AGG | + | tig0010571:44059-44078 | Msa1348840:intron | 40.0% | |
! | TTTTACTCCAGGGTGAATAC+TGG | + | tig0010571:44124-44143 | Msa1348840:intron | 40.0% |
TTTACTCCAGGGTGAATACT+GGG | + | tig0010571:44125-44144 | Msa1348840:intron | 40.0% | |
! | AATAGTGGGAGGTGGTAATT+TGG | + | tig0010571:44157-44176 | Msa1348840:intron | 40.0% |
AGGGGAACGAAGAATATAAG+AGG | + | tig0010571:44182-44201 | Msa1348840:intron | 40.0% | |
GGGGAACGAAGAATATAAGA+GGG | + | tig0010571:44183-44202 | Msa1348840:intron | 40.0% | |
CAGATTGTTTATTCAGGGTG+TGG | + | tig0010571:44297-44316 | Msa1348840:intron | 40.0% | |
CACACCATTGTAATTCCTAC+TGG | - | tig0010571:44563-44582 | None:intergenic | 40.0% | |
CAGTAGGAATTACAATGGTG+TGG | + | tig0010571:44561-44580 | Msa1348840:CDS | 40.0% | |
GAATTACAATGGTGTGGAGA+GGG | + | tig0010571:44567-44586 | Msa1348840:CDS | 40.0% | |
TCGGTTGGAAAAATCACTCT+CGG | + | tig0010571:44645-44664 | Msa1348840:CDS | 40.0% | |
! | GTATCAGTAGTTGATGTGCT+AGG | - | tig0010571:44682-44701 | None:intergenic | 40.0% |
AGGATCAATTCATCCACATC+TGG | + | tig0010571:44718-44737 | Msa1348840:CDS | 40.0% | |
CTATCTTCCAAGACTACAAC+AGG | - | tig0010571:44835-44854 | None:intergenic | 40.0% | |
CATCAAATGCAAAGGGATCA+TGG | - | tig0010571:44858-44877 | None:intergenic | 40.0% | |
TGATCCCTTTGCATTTGATG+AGG | + | tig0010571:44858-44877 | Msa1348840:CDS | 40.0% | |
GTCATCCTCATCAAATGCAA+AGG | - | tig0010571:38254-38273 | None:intergenic | 40.0% | |
CTATGACCCAAAATAGTTCC+AGG | + | tig0010571:44920-44939 | Msa1348840:CDS | 40.0% | |
CGTAAACTGAACATTCTTCC+TGG | - | tig0010571:44941-44960 | None:intergenic | 40.0% | |
ATCTTCCAAGATTACAACCG+GGG | - | tig0010571:44971-44990 | None:intergenic | 40.0% | |
CATTCTTCCTCGAACTACTT+AGG | - | tig0010571:45068-45087 | None:intergenic | 40.0% | |
ATCTTCCAAGATTACAACCG+GGG | - | tig0010571:44971-44990 | None:intergenic | 40.0% | |
CATCTTCCAAGATTACAACC+GGG | - | tig0010571:45110-45129 | None:intergenic | 40.0% | |
CATCCTCATCAAATGCAAAG+GGG | - | tig0010571:44864-44883 | None:intergenic | 40.0% | |
AGTCAAGAAGAGTCAAGTGA+TGG | + | tig0010571:45276-45295 | Msa1348840:CDS | 40.0% | |
GTCAAGAAGAGTCAAGTGAT+GGG | + | tig0010571:45277-45296 | Msa1348840:CDS | 40.0% | |
TAAGGAGGCAATCAGTTAGA+AGG | - | tig0010571:45350-45369 | None:intergenic | 40.0% | |
!! | CTGCTGTCAAGGTATTTTAC+TGG | + | tig0010571:45370-45389 | Msa1348840:intron | 40.0% |
TTGACTAACGACAACCCTAT+TGG | + | tig0010571:45566-45585 | Msa1348840:CDS | 40.0% | |
TGTCAATTAATTGCTGCCCA+TGG | + | tig0010571:45590-45609 | Msa1348840:CDS | 40.0% | |
AATTAATTGCTGCCCATGGA+GGG | + | tig0010571:45594-45613 | Msa1348840:CDS | 40.0% | |
! | ATGGTCCTTTTCAGTTCTCA+AGG | - | tig0010571:45702-45721 | None:intergenic | 40.0% |
CAACAAGAAAATCCAACTCG+TGG | - | tig0010571:45748-45767 | None:intergenic | 40.0% | |
GCTTGTAAATCTGGTTGAGA+AGG | + | tig0010571:45781-45800 | Msa1348840:CDS | 40.0% | |
GTAAATCTGGTTGAGAAGGA+TGG | + | tig0010571:45785-45804 | Msa1348840:CDS | 40.0% | |
CTGTTGTTCTTCACTTAGCA+TGG | + | tig0010571:46045-46064 | Msa1348840:intron | 40.0% | |
TACTGAGAGTTCATGGATGT+CGG | - | tig0010571:46597-46616 | None:intergenic | 40.0% | |
GAAGAGTGACGAATCTTGAA+TGG | - | tig0010571:46762-46781 | None:intergenic | 40.0% | |
TCACTCTTCTTTGCAGATCA+CGG | + | tig0010571:46773-46792 | Msa1348840:intron | 40.0% | |
TGAAGAAGGAAGTAGAACAC+TGG | - | tig0010571:46809-46828 | None:intergenic | 40.0% | |
GTTCTACTTCCTTCTTCAGA+AGG | + | tig0010571:46811-46830 | Msa1348840:CDS | 40.0% | |
! | CTCTATTTTCTTGGCTAACC+AGG | + | tig0010571:46876-46895 | Msa1348840:CDS | 40.0% |
!!! | TTCCTTTTTTGATGCGTTGG+TGG | + | tig0010571:47018-47037 | Msa1348840:intron | 40.0% |
!!! | TCCTTTTTTGATGCGTTGGT+GGG | + | tig0010571:47019-47038 | Msa1348840:intron | 40.0% |
TGCTGTTCTACAAGGTGAAA+AGG | + | tig0010571:47223-47242 | Msa1348840:CDS | 40.0% | |
GGAAGCTGAGAAAATGATTG+TGG | + | tig0010571:47244-47263 | Msa1348840:CDS | 40.0% | |
GCTTCTAGCATTTCTTTCCA+CGG | + | tig0010571:47283-47302 | Msa1348840:CDS | 40.0% | |
TAGCATTTCTTTCCACGGAA+AGG | + | tig0010571:47288-47307 | Msa1348840:CDS | 40.0% | |
ATAAGAAGTTCACCTTTCCG+TGG | - | tig0010571:47303-47322 | None:intergenic | 40.0% | |
!! | AGACTTGCTAAGTTGTGATC+TGG | - | tig0010571:47438-47457 | None:intergenic | 40.0% |
!! | CAGCATGCATTTGACTTGAA+CGG | + | tig0010571:47553-47572 | Msa1348840:intron | 40.0% |
ATGCCTGTAAGTGACAATTG+CGG | + | tig0010571:47603-47622 | Msa1348840:intron | 40.0% | |
! | GGATTTAAAACCGCATCTGA+AGG | + | tig0010571:47634-47653 | Msa1348840:intron | 40.0% |
TGAAGGGTCAAAAGTGAAGA+TGG | + | tig0010571:47651-47670 | Msa1348840:intron | 40.0% | |
AAAATTAAAAGGGGAACCCC+AGG | - | tig0010571:47698-47717 | None:intergenic | 40.0% | |
TTCCTGCACATAAAGACACA+CGG | - | tig0010571:47758-47777 | None:intergenic | 40.0% | |
GCAGGAATTTCATCTGTCTT+TGG | + | tig0010571:47771-47790 | Msa1348840:intron | 40.0% | |
ACAAATCCTAAAGCAAGACG+TGG | - | tig0010571:47888-47907 | None:intergenic | 40.0% | |
ATATCACCATGCTGGTGATA+CGG | + | tig0010571:48001-48020 | Msa1348840:three_prime_UTR | 40.0% | |
!! | TCAGCTTACGGAAAGTACCT+CGG | + | tig0010571:38201-38220 | Msa1348840:five_prime_UTR | 45.0% |
GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
CCTCAAACTACTTAGGGACA+TGG | - | tig0010571:38311-38330 | None:intergenic | 45.0% | |
CCATGTCCCTAAGTAGTTTG+AGG | + | tig0010571:38308-38327 | Msa1348840:intron | 45.0% | |
AGTGTGAACACTCCCTTTGA+GGG | + | tig0010571:38457-38476 | Msa1348840:intron | 45.0% | |
!! | GGTAAAGAAGCGTTTAACGG+AGG | - | tig0010571:38486-38505 | None:intergenic | 45.0% |
TATGATGGTCCTGTTATGGG+GGG | - | tig0010571:38638-38657 | None:intergenic | 45.0% | |
CTATTAAAACCCAAGGGAGG+AGG | - | tig0010571:38765-38784 | None:intergenic | 45.0% | |
! | GTGCTATTAAAACCCAAGGG+AGG | - | tig0010571:38768-38787 | None:intergenic | 45.0% |
CTTATAGGTTGTTGTCGGGT+TGG | - | tig0010571:38931-38950 | None:intergenic | 45.0% | |
CAAGCACCTTGTCTGCTTAT+AGG | - | tig0010571:38946-38965 | None:intergenic | 45.0% | |
TGCTTGTGCGGAAAGAGTTT+AGG | + | tig0010571:38960-38979 | Msa1348840:intron | 45.0% | |
GCTTGTGCGGAAAGAGTTTA+GGG | + | tig0010571:38961-38980 | Msa1348840:intron | 45.0% | |
! | TTTAGGGCCCATGAGAAATG+TGG | + | tig0010571:38977-38996 | Msa1348840:intron | 45.0% |
TTAGGGCCCATGAGAAATGT+GGG | + | tig0010571:38978-38997 | Msa1348840:intron | 45.0% | |
TCATCGCCCACATTTCTCAT+GGG | - | tig0010571:38987-39006 | None:intergenic | 45.0% | |
ATCATCGCCCACATTTCTCA+TGG | - | tig0010571:38988-39007 | None:intergenic | 45.0% | |
ATGAGAAATGTGGGCGATGA+TGG | + | tig0010571:38987-39006 | Msa1348840:intron | 45.0% | |
! | ATTTGTTACGAGCCATGCCA+AGG | + | tig0010571:39128-39147 | Msa1348840:intron | 45.0% |
CTTGCATTTCTTCCTTGGCA+TGG | - | tig0010571:39143-39162 | None:intergenic | 45.0% | |
! | TTTTATCGGATGTCCCCGAA+GGG | - | tig0010571:39523-39542 | None:intergenic | 45.0% |
! | ATTTTATCGGATGTCCCCGA+AGG | - | tig0010571:39524-39543 | None:intergenic | 45.0% |
TCGGGGACATCCGATAAAAT+TGG | + | tig0010571:39524-39543 | Msa1348840:intron | 45.0% | |
! | TGAACGTAGCTCAGTTGGTA+TGG | + | tig0010571:39625-39644 | Msa1348840:intron | 45.0% |
!!! | ACTTTTTTTTGTGGTGGCCG+GGG | + | tig0010571:39780-39799 | Msa1348840:intron | 45.0% |
! | CGACAAGATGAGGGCTTTTT+GGG | - | tig0010571:40201-40220 | None:intergenic | 45.0% |
! | TCGACAAGATGAGGGCTTTT+TGG | - | tig0010571:40202-40221 | None:intergenic | 45.0% |
GGCATTCTTCGACAAGATGA+GGG | - | tig0010571:40210-40229 | None:intergenic | 45.0% | |
TGGCATTCTTCGACAAGATG+AGG | - | tig0010571:40211-40230 | None:intergenic | 45.0% | |
AATCGGAGATCGGTGGTTTA+CGG | - | tig0010571:40268-40287 | None:intergenic | 45.0% | |
!!! | ATTTTGGAATCGGAGATCGG+TGG | - | tig0010571:40275-40294 | None:intergenic | 45.0% |
GGAAGAGGATGAATACGTTC+CGG | - | tig0010571:40336-40355 | None:intergenic | 45.0% | |
GTCTGATACGTCGTCGTTTA+GGG | - | tig0010571:40357-40376 | None:intergenic | 45.0% | |
AGTCTGATACGTCGTCGTTT+AGG | - | tig0010571:40358-40377 | None:intergenic | 45.0% | |
TTGGGATTGGGATTGGGAAA+GGG | - | tig0010571:40387-40406 | None:intergenic | 45.0% | |
TGAGAAGAGAAGGCGAAATC+GGG | - | tig0010571:40422-40441 | None:intergenic | 45.0% | |
CTCAAGATTCTTCCTCTCAG+TGG | + | tig0010571:40438-40457 | Msa1348840:CDS | 45.0% | |
ATCGAAGAAAGACCACTGAG+AGG | - | tig0010571:40453-40472 | None:intergenic | 45.0% | |
! | ATCGTCGATTGAATTGGGGT+CGG | - | tig0010571:40477-40496 | None:intergenic | 45.0% |
!!! | ATCGACGATTTTGGTTACGG+TGG | + | tig0010571:40488-40507 | Msa1348840:CDS | 45.0% |
!!! | ATTTTGGTTACGGTGGTCGA+CGG | + | tig0010571:40495-40514 | Msa1348840:CDS | 45.0% |
!!! | GATGCGTTTTTTGCCCTCTT+TGG | - | tig0010571:40524-40543 | None:intergenic | 45.0% |
!! | GTCAACCGATTCGAATCAGA+AGG | + | tig0010571:40660-40679 | Msa1348840:CDS | 45.0% |
! | CTAGCCCTTCTGATTCGAAT+CGG | - | tig0010571:40668-40687 | None:intergenic | 45.0% |
!! | TCGAATCAGAAGGGCTAGTT+TGG | + | tig0010571:40670-40689 | Msa1348840:CDS | 45.0% |
! | AAGCCTTCTTTGCTGTGTTG+TGG | - | tig0010571:40717-40736 | None:intergenic | 45.0% |
AGAAGGCTTCTTCGTTCTCA+AGG | + | tig0010571:40728-40747 | Msa1348840:CDS | 45.0% | |
GAAGGCTTCTTCGTTCTCAA+GGG | + | tig0010571:40729-40748 | Msa1348840:CDS | 45.0% | |
AGAAGTTTCGAGCCAAGACT+TGG | - | tig0010571:41977-41996 | None:intergenic | 45.0% | |
GCAACGTGTCAGAATAACAG+TGG | + | tig0010571:42112-42131 | Msa1348840:CDS | 45.0% | |
AACCACTTTGGGCATAACTC+TGG | - | tig0010571:42148-42167 | None:intergenic | 45.0% | |
! | GAAAAACTAAGGGAGCATGG+AGG | + | tig0010571:42820-42839 | Msa1348840:CDS | 45.0% |
!!! | ACAGGGAGAGCATTTTCTGA+TGG | + | tig0010571:42984-43003 | Msa1348840:intron | 45.0% |
GGCACTTAAGAAGCAAGGTT+AGG | - | tig0010571:43187-43206 | None:intergenic | 45.0% | |
CTTCAGGCACTTAAGAAGCA+AGG | - | tig0010571:43192-43211 | None:intergenic | 45.0% | |
CTAAGCAAAGACAACCAGGT+TGG | + | tig0010571:43233-43252 | Msa1348840:intron | 45.0% | |
GGTAAAGAAACATGCCAACC+TGG | - | tig0010571:43250-43269 | None:intergenic | 45.0% | |
AAAGACAATGGGGTTGCCTT+AGG | - | tig0010571:43468-43487 | None:intergenic | 45.0% | |
! | GGCAACCCCATTGTCTTTTA+CGG | + | tig0010571:43470-43489 | Msa1348840:CDS | 45.0% |
CAGCTCCGTAAAAGACAATG+GGG | - | tig0010571:43478-43497 | None:intergenic | 45.0% | |
!! | AGCTTGTTATCAACGGACAC+AGG | - | tig0010571:43706-43725 | None:intergenic | 45.0% |
CATCGCTGGCCATAAAGAAA+GGG | - | tig0010571:43735-43754 | None:intergenic | 45.0% | |
TCATCGCTGGCCATAAAGAA+AGG | - | tig0010571:43736-43755 | None:intergenic | 45.0% | |
ATCCAGTTCAGAATCATCGC+TGG | - | tig0010571:43749-43768 | None:intergenic | 45.0% | |
! | AGTGATGGCGCTTATTACTG+AGG | + | tig0010571:44005-44024 | Msa1348840:intron | 45.0% |
TGGGAGGTGGTAATTTGGTT+AGG | + | tig0010571:44162-44181 | Msa1348840:intron | 45.0% | |
GGGAGGTGGTAATTTGGTTA+GGG | + | tig0010571:44163-44182 | Msa1348840:intron | 45.0% | |
GGAGGTGGTAATTTGGTTAG+GGG | + | tig0010571:44164-44183 | Msa1348840:intron | 45.0% | |
GGAATTACAATGGTGTGGAG+AGG | + | tig0010571:44566-44585 | Msa1348840:CDS | 45.0% | |
CCGAGCACATGTCAATAGTT+GGG | - | tig0010571:44629-44648 | None:intergenic | 45.0% | |
CCCAACTATTGACATGTGCT+CGG | + | tig0010571:44626-44645 | Msa1348840:CDS | 45.0% | |
ACCGAGCACATGTCAATAGT+TGG | - | tig0010571:44630-44649 | None:intergenic | 45.0% | |
ACTATTGACATGTGCTCGGT+TGG | + | tig0010571:44630-44649 | Msa1348840:CDS | 45.0% | |
ACTACTGCAAGAACCAGATG+TGG | - | tig0010571:44734-44753 | None:intergenic | 45.0% | |
GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
!! | TCAGTTTACGAGAAGTACCC+CGG | + | tig0010571:44951-44970 | Msa1348840:CDS | 45.0% |
AAGTACCCCGGTTGTAATCT+TGG | + | tig0010571:44963-44982 | Msa1348840:CDS | 45.0% | |
GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
! | TCACTTTAAGGAACGTACCC+CGG | + | tig0010571:45089-45108 | Msa1348840:CDS | 45.0% |
CATCAAATGCAAAGGGGTCT+TGG | - | tig0010571:45134-45153 | None:intergenic | 45.0% | |
AGACCCCTTTGCATTTGATG+AGG | + | tig0010571:45134-45153 | Msa1348840:CDS | 45.0% | |
ATGATATTGCGCCCTCTAAG+TGG | + | tig0010571:45157-45176 | Msa1348840:CDS | 45.0% | |
TGATATTGCGCCCTCTAAGT+GGG | + | tig0010571:45158-45177 | Msa1348840:CDS | 45.0% | |
GATAGTAGGTCCCACTTAGA+GGG | - | tig0010571:45171-45190 | None:intergenic | 45.0% | |
CTCTAAGTGGGACCTACTAT+CGG | + | tig0010571:45170-45189 | Msa1348840:CDS | 45.0% | |
TCTAAGTGGGACCTACTATC+GGG | + | tig0010571:45171-45190 | Msa1348840:CDS | 45.0% | |
ATACCTTGACAGCAGTAAGG+AGG | - | tig0010571:45365-45384 | None:intergenic | 45.0% | |
CTGCAACTACACATGAAACG+TGG | - | tig0010571:45464-45483 | None:intergenic | 45.0% | |
CAACACCTACAAGACAACAC+AGG | - | tig0010571:45540-45559 | None:intergenic | 45.0% | |
CAATTAATTGCTGCCCATGG+AGG | + | tig0010571:45593-45612 | Msa1348840:CDS | 45.0% | |
ATGACGGTGAGCTGAAAGAA+GGG | - | tig0010571:45655-45674 | None:intergenic | 45.0% | |
! | TCTGGGCTTGCTTGTAAATC+TGG | + | tig0010571:45772-45791 | Msa1348840:CDS | 45.0% |
TTGAGAAGGATGGTCGTAAC+AGG | + | tig0010571:45795-45814 | Msa1348840:CDS | 45.0% | |
TGTGTGTGTGTGTGTGAGAT+AGG | + | tig0010571:45996-46015 | Msa1348840:intron | 45.0% | |
GTGTGTGTGTGTGTGAGATA+GGG | + | tig0010571:45997-46016 | Msa1348840:intron | 45.0% | |
GATGCAAGAATCATGCAGCT+TGG | - | tig0010571:46113-46132 | None:intergenic | 45.0% | |
GATGTCGGTATAGCAGTAGT+GGG | - | tig0010571:46582-46601 | None:intergenic | 45.0% | |
ACTTCCTTCTTCAGAAGGCT+TGG | + | tig0010571:46816-46835 | Msa1348840:CDS | 45.0% | |
TCCCACCAACGCATCAAAAA+AGG | - | tig0010571:47023-47042 | None:intergenic | 45.0% | |
GATTGTCAGCAATTGCTGCA+CGG | - | tig0010571:47413-47432 | None:intergenic | 45.0% | |
! | AGCAAGTCTTGTACCTGTGT+TGG | + | tig0010571:47449-47468 | Msa1348840:CDS | 45.0% |
ACCTGTGTTGGACAGATTTG+TGG | + | tig0010571:47461-47480 | Msa1348840:CDS | 45.0% | |
ACCACAAATCTGTCCAACAC+AGG | - | tig0010571:47465-47484 | None:intergenic | 45.0% | |
CGTTCAAGTCAAATGCATGC+TGG | - | tig0010571:47555-47574 | None:intergenic | 45.0% | |
TGCCTGTAAGTGACAATTGC+GGG | + | tig0010571:47604-47623 | Msa1348840:intron | 45.0% | |
! | CACTTTTGACCCTTCAGATG+CGG | - | tig0010571:47647-47666 | None:intergenic | 45.0% |
AACCGTGTGTCTTTATGTGC+AGG | + | tig0010571:47753-47772 | Msa1348840:intron | 45.0% | |
GGTTACACACAGACTATGCT+AGG | - | tig0010571:48070-48089 | None:intergenic | 45.0% | |
!! | AATAATAAAAAATTATAACT+TGG | - | tig0010571:41633-41652 | None:intergenic | 5.0% |
!!! | TTAAAAAGTTATTATTATTT+TGG | + | tig0010571:41665-41684 | Msa1348840:intron | 5.0% |
!! | AAAATAAAAAACATTATTTA+AGG | - | tig0010571:43077-43096 | None:intergenic | 5.0% |
AAGTACCTCGGTTGCGATCT+TGG | + | tig0010571:38213-38232 | Msa1348840:five_prime_UTR | 50.0% | |
ATCTTCCAAGATCGCAACCG+AGG | - | tig0010571:38221-38240 | None:intergenic | 50.0% | |
TGCGATCTTGGAAGATAGCC+AGG | + | tig0010571:38225-38244 | Msa1348840:five_prime_UTR | 50.0% | |
GAGTGTGAACACTCCCTTTG+AGG | + | tig0010571:38456-38475 | Msa1348840:intron | 50.0% | |
TAACGGAGGCAACCCTCAAA+GGG | - | tig0010571:38472-38491 | None:intergenic | 50.0% | |
TTAACGGAGGCAACCCTCAA+AGG | - | tig0010571:38473-38492 | None:intergenic | 50.0% | |
TATGGGGGGATAGGAACACT+TGG | - | tig0010571:38624-38643 | None:intergenic | 50.0% | |
TGTTCCTATCCCCCCATAAC+AGG | + | tig0010571:38626-38645 | Msa1348840:intron | 50.0% | |
!! | TCGGGTTGGGATAATGCAGT+CGG | - | tig0010571:38917-38936 | None:intergenic | 50.0% |
! | AAGCAGACAAGGTGCTTGTG+CGG | + | tig0010571:38948-38967 | Msa1348840:intron | 50.0% |
CCAACTGAGCTACGTTCACA+AGG | - | tig0010571:39623-39642 | None:intergenic | 50.0% | |
CCTTGTGAACGTAGCTCAGT+TGG | + | tig0010571:39620-39639 | Msa1348840:intron | 50.0% | |
GCAAGGTCATATGCAAGGTC+CGG | + | tig0010571:39674-39693 | Msa1348840:intron | 50.0% | |
CAAGGTCATATGCAAGGTCC+GGG | + | tig0010571:39675-39694 | Msa1348840:intron | 50.0% | |
AAGGTCATATGCAAGGTCCG+GGG | + | tig0010571:39676-39695 | Msa1348840:intron | 50.0% | |
AAGGTCATATGCAAGGTCCG+GGG | - | tig0010571:39676-39695 | None:intergenic | 50.0% | |
CAAGGTCATATGCAAGGTCC+GGG | - | tig0010571:39675-39694 | None:intergenic | 50.0% | |
GCAAGGTCATATGCAAGGTC+CGG | - | tig0010571:39674-39693 | None:intergenic | 50.0% | |
GGCGGCTATGTCGATGAATT+TGG | - | tig0010571:40237-40256 | None:intergenic | 50.0% | |
CGCCGCAAACCATCAATTTC+CGG | + | tig0010571:40314-40333 | Msa1348840:CDS | 50.0% | |
TACGTCGTCGTTTAGGGAAG+AGG | - | tig0010571:40351-40370 | None:intergenic | 50.0% | |
CTTGGGATTGGGATTGGGAA+AGG | - | tig0010571:40388-40407 | None:intergenic | 50.0% | |
TGGGTCTTGGGATTGGGATT+GGG | - | tig0010571:40393-40412 | None:intergenic | 50.0% | |
GTAGAGTGGGTCTTGGGATT+GGG | - | tig0010571:40399-40418 | None:intergenic | 50.0% | |
GAGAAGAGAAGGCGAAATCG+GGG | - | tig0010571:40421-40440 | None:intergenic | 50.0% | |
!! | TTTTGGTTACGGTGGTCGAC+GGG | + | tig0010571:40496-40515 | Msa1348840:CDS | 50.0% |
!! | GCTCTTGATGGACTTCGGAA+AGG | + | tig0010571:40638-40657 | Msa1348840:CDS | 50.0% |
GTGCCACAACACAGCAAAGA+AGG | + | tig0010571:40711-40730 | Msa1348840:CDS | 50.0% | |
GTTGCAGCTGCAAGATTGCT+GGG | - | tig0010571:41107-41126 | None:intergenic | 50.0% | |
GACCAGAGTTATGCCCAAAG+TGG | + | tig0010571:42143-42162 | Msa1348840:CDS | 50.0% | |
!! | CAGAAACCTCTGGTGCTGTA+CGG | + | tig0010571:42776-42795 | Msa1348840:intron | 50.0% |
!! | CACAGGGGTAATTTCTGGCT+TGG | + | tig0010571:43538-43557 | Msa1348840:intron | 50.0% |
GTTATCAACGGACACAGGAG+AGG | - | tig0010571:43701-43720 | None:intergenic | 50.0% | |
!! | AGAATGCGCCGATTGAGTGA+TGG | + | tig0010571:43990-44009 | Msa1348840:intron | 50.0% |
!! | CCTGGAACTATTTTGGGTCG+TGG | - | tig0010571:44785-44804 | None:intergenic | 50.0% |
CCACGACCCAAAATAGTTCC+AGG | + | tig0010571:44782-44801 | Msa1348840:CDS | 50.0% | |
AGGTGTCCCTGTTGTAGTCT+TGG | + | tig0010571:44825-44844 | Msa1348840:CDS | 50.0% | |
ACGTACCCCGGTTGTAATCT+TGG | + | tig0010571:45101-45120 | Msa1348840:CDS | 50.0% | |
CGATAGTAGGTCCCACTTAG+AGG | - | tig0010571:45172-45191 | None:intergenic | 50.0% | |
CTAAGTGGGACCTACTATCG+GGG | + | tig0010571:45172-45191 | Msa1348840:CDS | 50.0% | |
GAGGCAATCAGTTAGAAGGC+TGG | - | tig0010571:45346-45365 | None:intergenic | 50.0% | |
TTGCCTCCTTACTGCTGTCA+AGG | + | tig0010571:45359-45378 | Msa1348840:CDS | 50.0% | |
! | GATGACGGTGAGCTGAAAGA+AGG | - | tig0010571:45656-45675 | None:intergenic | 50.0% |
GCATCTAACTGACCACGAGT+TGG | + | tig0010571:45733-45752 | Msa1348840:CDS | 50.0% | |
ACACACACACAGAGTCACGT+AGG | - | tig0010571:45987-46006 | None:intergenic | 50.0% | |
TCATGCAGCTTGGAGAGAGA+GGG | - | tig0010571:46103-46122 | None:intergenic | 50.0% | |
ATCATGCAGCTTGGAGAGAG+AGG | - | tig0010571:46104-46123 | None:intergenic | 50.0% | |
! | ACACACAGAGACTGGTCAAG+GGG | - | tig0010571:46150-46169 | None:intergenic | 50.0% |
! | CACACACAGAGACTGGTCAA+GGG | - | tig0010571:46151-46170 | None:intergenic | 50.0% |
! | ACACACACAGAGACTGGTCA+AGG | - | tig0010571:46152-46171 | None:intergenic | 50.0% |
ACACACACACACACAGAGAC+TGG | - | tig0010571:46158-46177 | None:intergenic | 50.0% | |
GGATGTCGGTATAGCAGTAG+TGG | - | tig0010571:46583-46602 | None:intergenic | 50.0% | |
! | TGGTCCAAGCCTTCTGAAGA+AGG | - | tig0010571:46823-46842 | None:intergenic | 50.0% |
TTCTTCAGAAGGCTTGGACC+AGG | + | tig0010571:46822-46841 | Msa1348840:CDS | 50.0% | |
TAACCAGGGTGAAAGTGAGG+CGG | + | tig0010571:46891-46910 | Msa1348840:CDS | 50.0% | |
GATCCTGCTGCTGTTCTACA+AGG | + | tig0010571:47215-47234 | Msa1348840:CDS | 50.0% | |
TCACCTTGTAGAACAGCAGC+AGG | - | tig0010571:47221-47240 | None:intergenic | 50.0% | |
! | TGCCCGCAATTGTCACTTAC+AGG | - | tig0010571:47609-47628 | None:intergenic | 50.0% |
GTAAGTGACAATTGCGGGCA+TGG | + | tig0010571:47609-47628 | Msa1348840:intron | 50.0% | |
GTACAGCCACGTCTTGCTTT+AGG | + | tig0010571:47879-47898 | Msa1348840:three_prime_UTR | 50.0% | |
TGGTCCTGTTATGGGGGGAT+AGG | - | tig0010571:38633-38652 | None:intergenic | 55.0% | |
AAGGTCCGGGGTTCAAACTC+CGG | + | tig0010571:39688-39707 | Msa1348840:intron | 55.0% | |
!! | TGGTTTACGGTGGTTGGTGG+CGG | - | tig0010571:40255-40274 | None:intergenic | 55.0% |
GATCGGTGGTTTACGGTGGT+TGG | - | tig0010571:40261-40280 | None:intergenic | 55.0% | |
GTGGGTCTTGGGATTGGGAT+TGG | - | tig0010571:40394-40413 | None:intergenic | 55.0% | |
GGTAGAGTGGGTCTTGGGAT+TGG | - | tig0010571:40400-40419 | None:intergenic | 55.0% | |
ATCGGGGTAGAGTGGGTCTT+GGG | - | tig0010571:40405-40424 | None:intergenic | 55.0% | |
AATCGGGGTAGAGTGGGTCT+TGG | - | tig0010571:40406-40425 | None:intergenic | 55.0% | |
AGGCGAAATCGGGGTAGAGT+GGG | - | tig0010571:40412-40431 | None:intergenic | 55.0% | |
AAGGCGAAATCGGGGTAGAG+TGG | - | tig0010571:40413-40432 | None:intergenic | 55.0% | |
! | TTGATGGAGGCGCAGGAGTT+TGG | + | tig0010571:40581-40600 | Msa1348840:CDS | 55.0% |
GCAGGAGTTTGGCGAGATGA+TGG | + | tig0010571:40592-40611 | Msa1348840:CDS | 55.0% | |
GGTTGCAGCTGCAAGATTGC+TGG | - | tig0010571:41108-41127 | None:intergenic | 55.0% | |
AGTCTTCCGTACAGCACCAG+AGG | - | tig0010571:42785-42804 | None:intergenic | 55.0% | |
!! | TCTGGTGCTGTACGGAAGAC+TGG | + | tig0010571:42784-42803 | Msa1348840:CDS | 55.0% |
GGCCAGCGATGATTCTGAAC+TGG | + | tig0010571:43744-43763 | Msa1348840:CDS | 55.0% | |
!! | ACTGGGCTGGCAAGGAATAG+TGG | + | tig0010571:44142-44161 | Msa1348840:intron | 55.0% |
!! | CTGGGCTGGCAAGGAATAGT+GGG | + | tig0010571:44143-44162 | Msa1348840:intron | 55.0% |
! | TGGCAAGGAATAGTGGGAGG+TGG | + | tig0010571:44149-44168 | Msa1348840:intron | 55.0% |
CCTCGAACTACTTAGGGACG+TGG | - | tig0010571:45061-45080 | None:intergenic | 55.0% | |
CCACGTCCCTAAGTAGTTCG+AGG | + | tig0010571:45058-45077 | Msa1348840:CDS | 55.0% | |
AATTGCTGCCCATGGAGGGT+TGG | + | tig0010571:45598-45617 | Msa1348840:CDS | 55.0% | |
CATAGCCTCCAACCCTCCAT+GGG | - | tig0010571:45609-45628 | None:intergenic | 55.0% | |
ACATAGCCTCCAACCCTCCA+TGG | - | tig0010571:45610-45629 | None:intergenic | 55.0% | |
! | ACACAGAGACTGGTCAAGGG+GGG | - | tig0010571:46148-46167 | None:intergenic | 55.0% |
! | CACACAGAGACTGGTCAAGG+GGG | - | tig0010571:46149-46168 | None:intergenic | 55.0% |
TTCAGAAGGCTTGGACCAGG+AGG | + | tig0010571:46825-46844 | Msa1348840:CDS | 55.0% | |
AAGGCTTGGACCAGGAGGTT+CGG | + | tig0010571:46830-46849 | Msa1348840:CDS | 55.0% | |
GGCTAACCAGGGTGAAAGTG+AGG | + | tig0010571:46888-46907 | Msa1348840:CDS | 55.0% | |
AACCAGGGTGAAAGTGAGGC+GGG | + | tig0010571:46892-46911 | Msa1348840:CDS | 55.0% | |
! | TGATGCGTTGGTGGGAAGCT+TGG | + | tig0010571:47027-47046 | Msa1348840:intron | 55.0% |
GTGGGAAGCTTGGAGTAGCA+AGG | + | tig0010571:47037-47056 | Msa1348840:intron | 55.0% | |
AGTGACAATTGCGGGCATGG+TGG | + | tig0010571:47612-47631 | Msa1348840:intron | 55.0% | |
GTGACAATTGCGGGCATGGT+GGG | + | tig0010571:47613-47632 | Msa1348840:intron | 55.0% | |
GCATCTCCGTATCACCAGCA+TGG | - | tig0010571:48010-48029 | None:intergenic | 55.0% | |
! | GTGGGCGATGATGGCACTCA+TGG | + | tig0010571:38996-39015 | Msa1348840:intron | 60.0% |
AAGGTCCGGGGTTCAAACCC+CGG | - | tig0010571:39800-39819 | None:intergenic | 60.0% | |
CGGTGGTTTACGGTGGTTGG+TGG | - | tig0010571:40258-40277 | None:intergenic | 60.0% | |
CGGAGATCGGTGGTTTACGG+TGG | - | tig0010571:40265-40284 | None:intergenic | 60.0% | |
TGGTCGACGGGAGCCAAAGA+GGG | + | tig0010571:40508-40527 | Msa1348840:CDS | 60.0% | |
TCCATCAACGTCGACGTCGC+CGG | - | tig0010571:40569-40588 | None:intergenic | 60.0% | |
! | GGTGCTGTACGGAAGACTGG+TGG | + | tig0010571:42787-42806 | Msa1348840:CDS | 60.0% |
CTCCAGGGTGAATACTGGGC+TGG | + | tig0010571:44129-44148 | Msa1348840:intron | 60.0% | |
TGCCAGCCCAGTATTCACCC+TGG | - | tig0010571:44134-44153 | None:intergenic | 60.0% | |
!! | GGGTGAATACTGGGCTGGCA+AGG | + | tig0010571:44134-44153 | Msa1348840:intron | 60.0% |
! | GGCTGGCAAGGAATAGTGGG+AGG | + | tig0010571:44146-44165 | Msa1348840:intron | 60.0% |
TCAAGGGGGGATTGGAGGGA+AGG | - | tig0010571:46135-46154 | None:intergenic | 60.0% | |
CTGGTCAAGGGGGGATTGGA+GGG | - | tig0010571:46139-46158 | None:intergenic | 60.0% | |
ACTGGTCAAGGGGGGATTGG+AGG | - | tig0010571:46140-46159 | None:intergenic | 60.0% | |
! | GAGACTGGTCAAGGGGGGAT+TGG | - | tig0010571:46143-46162 | None:intergenic | 60.0% |
TAACATCCCGCCGAACCTCC+TGG | - | tig0010571:46843-46862 | None:intergenic | 60.0% | |
GTGAAAGTGAGGCGGGAGCT+GGG | + | tig0010571:46899-46918 | Msa1348840:CDS | 60.0% | |
TGAAAGTGAGGCGGGAGCTG+GGG | + | tig0010571:46900-46919 | Msa1348840:CDS | 60.0% | |
GGTGGCCGGAGTTTGAACCC+CGG | - | tig0010571:39696-39715 | None:intergenic | 65.0% | |
GTGGTCGACGGGAGCCAAAG+AGG | + | tig0010571:40507-40526 | Msa1348840:CDS | 65.0% | |
TCCGGCGACGTCGACGTTGA+TGG | + | tig0010571:40565-40584 | Msa1348840:CDS | 65.0% | |
! | GGCGACGTCGACGTTGATGG+AGG | + | tig0010571:40568-40587 | Msa1348840:CDS | 65.0% |
! | GTCGACGTTGATGGAGGCGC+AGG | + | tig0010571:40574-40593 | Msa1348840:CDS | 65.0% |
TGCTGCCCATGGAGGGTTGG+AGG | + | tig0010571:45601-45620 | Msa1348840:CDS | 65.0% | |
GCTTGGACCAGGAGGTTCGG+CGG | + | tig0010571:46833-46852 | Msa1348840:CDS | 65.0% | |
CTTGGACCAGGAGGTTCGGC+GGG | + | tig0010571:46834-46853 | Msa1348840:CDS | 65.0% | |
CTCCCGCCTCACTTTCACCC+TGG | - | tig0010571:46897-46916 | None:intergenic | 65.0% | |
GGTGAAAGTGAGGCGGGAGC+TGG | + | tig0010571:46898-46917 | Msa1348840:CDS | 65.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | + | tig0010571:39792-39811 | Msa1348840:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0010571 | gene | 38190 | 48189 | 38190 | ID=Msa1348840;Name=Msa1348840 |
tig0010571 | mRNA | 38190 | 48189 | 38190 | ID=Msa1348840-mRNA-1;Parent=Msa1348840;Name=Msa1348840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=329|1|1|1|0.92|0.85|14|331|956 |
tig0010571 | exon | 38190 | 38252 | 38190 | ID=Msa1348840-mRNA-1:exon:6597;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 40027 | 40750 | 40027 | ID=Msa1348840-mRNA-1:exon:6598;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 41052 | 41151 | 41052 | ID=Msa1348840-mRNA-1:exon:6599;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 41878 | 42217 | 41878 | ID=Msa1348840-mRNA-1:exon:6600;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 42779 | 42891 | 42779 | ID=Msa1348840-mRNA-1:exon:6601;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 43122 | 43250 | 43122 | ID=Msa1348840-mRNA-1:exon:6602;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 43432 | 43525 | 43432 | ID=Msa1348840-mRNA-1:exon:6603;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 43677 | 43787 | 43677 | ID=Msa1348840-mRNA-1:exon:6604;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 44536 | 45380 | 44536 | ID=Msa1348840-mRNA-1:exon:6605;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 45554 | 45816 | 45554 | ID=Msa1348840-mRNA-1:exon:6606;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 46789 | 46942 | 46789 | ID=Msa1348840-mRNA-1:exon:6607;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 47212 | 47309 | 47212 | ID=Msa1348840-mRNA-1:exon:6608;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 47401 | 47482 | 47401 | ID=Msa1348840-mRNA-1:exon:6609;Parent=Msa1348840-mRNA-1 |
tig0010571 | exon | 47775 | 48189 | 47775 | ID=Msa1348840-mRNA-1:exon:6610;Parent=Msa1348840-mRNA-1 |
tig0010571 | five_prime_UTR | 38190 | 38252 | 38190 | ID=Msa1348840-mRNA-1:five_prime_utr;Parent=Msa1348840-mRNA-1 |
tig0010571 | five_prime_UTR | 40027 | 40292 | 40027 | ID=Msa1348840-mRNA-1:five_prime_utr;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 40293 | 40750 | 40293 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 41052 | 41151 | 41052 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 41878 | 42217 | 41878 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 42779 | 42891 | 42779 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 43122 | 43250 | 43122 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 43432 | 43525 | 43432 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 43677 | 43787 | 43677 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 44536 | 45380 | 44536 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 45554 | 45816 | 45554 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 46789 | 46942 | 46789 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 47212 | 47309 | 47212 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 47401 | 47482 | 47401 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | CDS | 47775 | 47858 | 47775 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
tig0010571 | three_prime_UTR | 47859 | 48189 | 47859 | ID=Msa1348840-mRNA-1:three_prime_utr;Parent=Msa1348840-mRNA-1 |
Gene Sequence |
Protein sequence |