Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348840 | XP_013457070.1 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348840 | sp|F4I7C7|WAPL1_ARATH | 47.643 | 594 | 287 | 12 | 1 | 584 | 58 | 637 | 5.37e-139 | 442 |
| Msa1348840 | sp|F4I7C7|WAPL1_ARATH | 55.352 | 327 | 123 | 6 | 645 | 954 | 608 | 928 | 2.54e-86 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348840 | A0A072UNY9 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0936190 | Msa1348840 | 0.834772 | 2.470598e-56 | -8.615850e-47 |
| Msa0973090 | Msa1348840 | 0.828200 | 1.026045e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348840 | MtrunA17_Chr4g0047621 | 96.444 | 956 | 33 | 1 | 1 | 956 | 1 | 955 | 0.0 | 1878 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348840 | AT1G11060.1 | 47.643 | 594 | 287 | 12 | 1 | 584 | 58 | 637 | 5.46e-140 | 442 |
| Msa1348840 | AT1G11060.1 | 55.352 | 327 | 123 | 6 | 645 | 954 | 608 | 928 | 2.59e-87 | 300 |
| Msa1348840 | AT1G61030.1 | 44.845 | 582 | 268 | 10 | 1 | 570 | 1 | 541 | 2.04e-133 | 422 |
| Msa1348840 | AT1G61030.1 | 51.404 | 356 | 148 | 9 | 612 | 955 | 497 | 839 | 1.34e-90 | 307 |
Find 251 sgRNAs with CRISPR-Local
Find 690 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTTCCTGGAACTATTT+TGG | 0.054582 | tig0010571:-44789 | None:intergenic |
| CATTCTTCCTGGAACTATTT+TGG | 0.054582 | tig0010571:-44927 | None:intergenic |
| GCTTAATGACCCTTTCTTTA+TGG | 0.079015 | tig0010571:+43723 | Msa1348840:CDS |
| GACAATAGTTGATGGAATTT+TGG | 0.108553 | tig0010571:+41061 | Msa1348840:CDS |
| GAGGAAGAATGTTCACTTTA+AGG | 0.140023 | tig0010571:+45077 | Msa1348840:CDS |
| CCCAATTCAATCGACGATTT+TGG | 0.157665 | tig0010571:+40479 | Msa1348840:CDS |
| TGACTCTTCTTGACTCATTT+TGG | 0.158032 | tig0010571:-45268 | None:intergenic |
| TCTGGGCTTGCTTGTAAATC+TGG | 0.214053 | tig0010571:+45772 | Msa1348840:CDS |
| TACAATTAACTAGAACTTCT+TGG | 0.244111 | tig0010571:-42078 | None:intergenic |
| GTATGTGCGAACAATCATTT+TGG | 0.248192 | tig0010571:-40288 | None:intergenic |
| AGTCTGATACGTCGTCGTTT+AGG | 0.255657 | tig0010571:-40355 | None:intergenic |
| TTATCTGCCATTTCTCTTGA+TGG | 0.262164 | tig0010571:+42196 | Msa1348840:CDS |
| ACCAAAATCGTCGATTGAAT+TGG | 0.284859 | tig0010571:-40480 | None:intergenic |
| GTCTGATACGTCGTCGTTTA+GGG | 0.292733 | tig0010571:-40354 | None:intergenic |
| GTACAGCCACGTCTTGCTTT+AGG | 0.296324 | tig0010571:+47879 | Msa1348840:three_prime_UTR |
| GGCGGCTATGTCGATGAATT+TGG | 0.296819 | tig0010571:-40234 | None:intergenic |
| CGCCGCAAACCATCAATTTC+CGG | 0.297863 | tig0010571:+40314 | Msa1348840:CDS |
| GCAGGAATTTCATCTGTCTT+TGG | 0.310658 | tig0010571:+47771 | Msa1348840:intron |
| AAGTACCTCGGTTGCGATCT+TGG | 0.333001 | tig0010571:+38213 | Msa1348840:five_prime_UTR |
| TATGTCGATGAATTTGGATT+TGG | 0.337025 | tig0010571:-40228 | None:intergenic |
| CCAAAATCGTCGATTGAATT+GGG | 0.338596 | tig0010571:-40479 | None:intergenic |
| TCGAATCAGAAGGGCTAGTT+TGG | 0.340230 | tig0010571:+40670 | Msa1348840:CDS |
| CATTCTTCCTCGAACTACTT+AGG | 0.349484 | tig0010571:-45065 | None:intergenic |
| GAGGTTAATTTCGCTCTTGA+TGG | 0.351464 | tig0010571:+40626 | Msa1348840:CDS |
| GTAGAGTGGGTCTTGGGATT+GGG | 0.351778 | tig0010571:-40396 | None:intergenic |
| TCTTAAGTGCCTGAAGATAA+TGG | 0.352174 | tig0010571:+43196 | Msa1348840:CDS |
| TGGGTCTTGGGATTGGGATT+GGG | 0.353604 | tig0010571:-40390 | None:intergenic |
| GCAATTAATTGACAGCCAAT+AGG | 0.354576 | tig0010571:-45581 | None:intergenic |
| TTGATGGAGGCGCAGGAGTT+TGG | 0.359647 | tig0010571:+40581 | Msa1348840:CDS |
| GGTGAAAGTGAGGCGGGAGC+TGG | 0.363636 | tig0010571:+46898 | Msa1348840:CDS |
| GTGGGTCTTGGGATTGGGAT+TGG | 0.365270 | tig0010571:-40391 | None:intergenic |
| GTAATTCCTACTGGAACTAA+TGG | 0.366824 | tig0010571:-44551 | None:intergenic |
| TCAGCAATGTTAACCACTTT+GGG | 0.367940 | tig0010571:-42156 | None:intergenic |
| GGTAGAGTGGGTCTTGGGAT+TGG | 0.371751 | tig0010571:-40397 | None:intergenic |
| AATCGGAGATCGGTGGTTTA+CGG | 0.373107 | tig0010571:-40265 | None:intergenic |
| CGTAAACTGAACATTCTTCC+TGG | 0.374073 | tig0010571:-44938 | None:intergenic |
| GGTTGCAGCTGCAAGATTGC+TGG | 0.380197 | tig0010571:-41105 | None:intergenic |
| CTATCTTCCAAGACTACAAC+AGG | 0.386943 | tig0010571:-44832 | None:intergenic |
| TTGACTAACGACAACCCTAT+TGG | 0.388364 | tig0010571:+45566 | Msa1348840:CDS |
| CTATCTTCCAAGATTACAAC+CGG | 0.392705 | tig0010571:-44970 | None:intergenic |
| TTGATAGTTGTGGATACAAT+TGG | 0.396412 | tig0010571:-41941 | None:intergenic |
| CACTAGTTAAAATGTAGAAA+AGG | 0.398233 | tig0010571:-41127 | None:intergenic |
| CATCAAATGCAAAGGGGTCT+TGG | 0.398429 | tig0010571:-45131 | None:intergenic |
| TTGAGAAGAGAAGGCGAAAT+CGG | 0.399137 | tig0010571:-40420 | None:intergenic |
| CGATAGTAGGTCCCACTTAG+AGG | 0.400082 | tig0010571:-45169 | None:intergenic |
| GTCAGCAATGTTAACCACTT+TGG | 0.402172 | tig0010571:-42157 | None:intergenic |
| CTACTGGAACTAATGGATAT+AGG | 0.404595 | tig0010571:-44544 | None:intergenic |
| CAATTAATTGACAGCCAATA+GGG | 0.404969 | tig0010571:-45580 | None:intergenic |
| AAGTACCCCGGTTGTAATCT+TGG | 0.406401 | tig0010571:+44963 | Msa1348840:CDS |
| CATCAAATGCAAATGGATCT+TGG | 0.407697 | tig0010571:-44993 | None:intergenic |
| CCACGACCCAAAATAGTTCC+AGG | 0.411206 | tig0010571:+44782 | Msa1348840:CDS |
| ACTTCCTTCTTCAGAAGGCT+TGG | 0.414944 | tig0010571:+46816 | Msa1348840:CDS |
| ACGTACCCCGGTTGTAATCT+TGG | 0.416580 | tig0010571:+45101 | Msa1348840:CDS |
| TTCTTTACCATCAAGAGAAA+TGG | 0.418970 | tig0010571:-42203 | None:intergenic |
| TCATCTTCCAAGATTACAAC+CGG | 0.419314 | tig0010571:-45108 | None:intergenic |
| GTCATAACTTATGTCAGAAC+TGG | 0.426510 | tig0010571:-45313 | None:intergenic |
| CTATGACCCAAAATAGTTCC+AGG | 0.431367 | tig0010571:+44920 | Msa1348840:CDS |
| GTGAAAGTGAGGCGGGAGCT+GGG | 0.432770 | tig0010571:+46899 | Msa1348840:CDS |
| TGAGAAGAGAAGGCGAAATC+GGG | 0.434156 | tig0010571:-40419 | None:intergenic |
| AAGGCTTGGACCAGGAGGTT+CGG | 0.436011 | tig0010571:+46830 | Msa1348840:CDS |
| GATCGGTGGTTTACGGTGGT+TGG | 0.436729 | tig0010571:-40258 | None:intergenic |
| TAAGGAGGCAATCAGTTAGA+AGG | 0.436868 | tig0010571:-45347 | None:intergenic |
| AATGGAGAATGTTCAGCTTA+CGG | 0.440258 | tig0010571:+38189 | None:intergenic |
| ATTCTTCCTCGAACTACTTA+GGG | 0.440300 | tig0010571:-45064 | None:intergenic |
| ATCGGGGTAGAGTGGGTCTT+GGG | 0.442872 | tig0010571:-40402 | None:intergenic |
| AAAAGGACCATCTATGTGAT+AGG | 0.443163 | tig0010571:+45711 | Msa1348840:CDS |
| AGTAAAGTGAACATTCTTCC+TGG | 0.443265 | tig0010571:-44800 | None:intergenic |
| GAATACGTTCCGGAAATTGA+TGG | 0.443414 | tig0010571:-40323 | None:intergenic |
| AGACTTGCTAAGTTGTGATC+TGG | 0.443554 | tig0010571:-47435 | None:intergenic |
| TCAGCTCCGTAAAAGACAAT+GGG | 0.444372 | tig0010571:-43476 | None:intergenic |
| TTTAGGATTTGTTGCTACTC+AGG | 0.444391 | tig0010571:+47896 | Msa1348840:three_prime_UTR |
| TGCTTTGTCTTTGATAGTTG+TGG | 0.445089 | tig0010571:-41951 | None:intergenic |
| CACACCATTGTAATTCCTAC+TGG | 0.446552 | tig0010571:-44560 | None:intergenic |
| TTGAGAAGGATGGTCGTAAC+AGG | 0.449162 | tig0010571:+45795 | Msa1348840:CDS |
| TTGGGATTGGGATTGGGAAA+GGG | 0.449889 | tig0010571:-40384 | None:intergenic |
| AAAGACAATGGGGTTGCCTT+AGG | 0.453975 | tig0010571:-43465 | None:intergenic |
| TTCCGGAAATTGATGGTTTG+CGG | 0.454271 | tig0010571:-40316 | None:intergenic |
| ATTTGTCTTTCAGAATTGTA+AGG | 0.456261 | tig0010571:+43109 | Msa1348840:intron |
| ATTTCAAGTTCTCACGTCCT+TGG | 0.459989 | tig0010571:+48170 | Msa1348840:three_prime_UTR |
| TGGTTTACGGTGGTTGGTGG+CGG | 0.461836 | tig0010571:-40252 | None:intergenic |
| ACCGAGCACATGTCAATAGT+TGG | 0.463917 | tig0010571:-44627 | None:intergenic |
| GCTATGTCTATGTTAATTGC+TGG | 0.464905 | tig0010571:+45623 | Msa1348840:CDS |
| TGCTGCCCATGGAGGGTTGG+AGG | 0.467231 | tig0010571:+45601 | Msa1348840:CDS |
| GTGCCACAACACAGCAAAGA+AGG | 0.467493 | tig0010571:+40711 | Msa1348840:CDS |
| TCATCCTCATCAAATGCAAA+TGG | 0.468762 | tig0010571:-45000 | None:intergenic |
| CTTGGGATTGGGATTGGGAA+AGG | 0.469988 | tig0010571:-40385 | None:intergenic |
| TAACACAACAAGGTGATTCA+AGG | 0.470102 | tig0010571:-41895 | None:intergenic |
| AAGCCTTCTTTGCTGTGTTG+TGG | 0.473030 | tig0010571:-40714 | None:intergenic |
| GTTCTACTTCCTTCTTCAGA+AGG | 0.473358 | tig0010571:+46811 | Msa1348840:CDS |
| CATCAAATGCAAATGGATCC+TGG | 0.473698 | tig0010571:-38243 | None:intergenic |
| TCATCCTCATCAAATGCAAA+GGG | 0.473724 | tig0010571:-45138 | None:intergenic |
| TCTAAGTGGGACCTACTATC+GGG | 0.476412 | tig0010571:+45171 | Msa1348840:CDS |
| TTCTTCAGAAGGCTTGGACC+AGG | 0.476652 | tig0010571:+46822 | Msa1348840:CDS |
| GGCCAGCGATGATTCTGAAC+TGG | 0.476713 | tig0010571:+43744 | Msa1348840:CDS |
| ACTCATTTGCTTGGAATGAA+AGG | 0.476771 | tig0010571:+43432 | Msa1348840:CDS |
| GTGGTTAACATTGCTGACTA+TGG | 0.479297 | tig0010571:+42162 | Msa1348840:CDS |
| CATCAAATGCAAAGGGATCA+TGG | 0.479401 | tig0010571:-44855 | None:intergenic |
| AGGATCAATTCATCCACATC+TGG | 0.481164 | tig0010571:+44718 | Msa1348840:CDS |
| AATCGGGGTAGAGTGGGTCT+TGG | 0.482811 | tig0010571:-40403 | None:intergenic |
| AGGTGTCCCTGTTGTAGTCT+TGG | 0.484408 | tig0010571:+44825 | Msa1348840:CDS |
| ACTAGTTAAAATGTAGAAAA+GGG | 0.486321 | tig0010571:-41126 | None:intergenic |
| TCTGGTGCTGTACGGAAGAC+TGG | 0.486444 | tig0010571:+42784 | Msa1348840:CDS |
| TGCTGTTCTACAAGGTGAAA+AGG | 0.486486 | tig0010571:+47223 | Msa1348840:CDS |
| TCATCGCTGGCCATAAAGAA+AGG | 0.486705 | tig0010571:-43733 | None:intergenic |
| CCGAGCACATGTCAATAGTT+GGG | 0.486788 | tig0010571:-44626 | None:intergenic |
| TCCGGCGACGTCGACGTTGA+TGG | 0.486979 | tig0010571:+40565 | Msa1348840:CDS |
| CGGTGGTTTACGGTGGTTGG+TGG | 0.487827 | tig0010571:-40255 | None:intergenic |
| TGCGATCTTGGAAGATAGCC+AGG | 0.488072 | tig0010571:+38225 | Msa1348840:five_prime_UTR |
| ATGGCAAAGACAATAGTTGA+TGG | 0.488358 | tig0010571:+41053 | Msa1348840:CDS |
| GATCAGTTAAGAGACTATAA+AGG | 0.490599 | tig0010571:+43766 | Msa1348840:CDS |
| CTTGGACCAGGAGGTTCGGC+GGG | 0.491437 | tig0010571:+46834 | Msa1348840:CDS |
| AGAAGGCTTCTTCGTTCTCA+AGG | 0.491687 | tig0010571:+40728 | Msa1348840:CDS |
| TCACCTTGTAGAACAGCAGC+AGG | 0.492302 | tig0010571:-47218 | None:intergenic |
| TACGTCGTCGTTTAGGGAAG+AGG | 0.493043 | tig0010571:-40348 | None:intergenic |
| GAATACGGTGAAAGATCAAA+TGG | 0.493152 | tig0010571:+47848 | Msa1348840:exon |
| ACCTGTGTTGGACAGATTTG+TGG | 0.497785 | tig0010571:+47461 | Msa1348840:CDS |
| TTAGATGCCTATCACATAGA+TGG | 0.498416 | tig0010571:-45718 | None:intergenic |
| TGGTCCAAGCCTTCTGAAGA+AGG | 0.498478 | tig0010571:-46820 | None:intergenic |
| ATTGTCATTAAAATGCTCTC+AGG | 0.500925 | tig0010571:+43504 | Msa1348840:CDS |
| GCAGGAGTTTGGCGAGATGA+TGG | 0.504193 | tig0010571:+40592 | Msa1348840:CDS |
| AAATTCCTTGAGAACTGAAA+AGG | 0.509346 | tig0010571:+45694 | Msa1348840:CDS |
| CTAGCCCTTCTGATTCGAAT+CGG | 0.510842 | tig0010571:-40665 | None:intergenic |
| TTCTAGATCTATGTCTGCGT+CGG | 0.512413 | tig0010571:+43671 | Msa1348840:intron |
| AACCACTTTGGGCATAACTC+TGG | 0.515359 | tig0010571:-42145 | None:intergenic |
| ATTTCGCTCTTGATGGACTT+CGG | 0.516940 | tig0010571:+40633 | Msa1348840:CDS |
| ATATCACCATGCTGGTGATA+CGG | 0.516959 | tig0010571:+48001 | Msa1348840:three_prime_UTR |
| ACTATTGACATGTGCTCGGT+TGG | 0.517595 | tig0010571:+44630 | Msa1348840:CDS |
| CTCTAAGTGGGACCTACTAT+CGG | 0.518152 | tig0010571:+45170 | Msa1348840:CDS |
| AGAAGTTTCGAGCCAAGACT+TGG | 0.519231 | tig0010571:-41974 | None:intergenic |
| TGAAAGTGAGGCGGGAGCTG+GGG | 0.520144 | tig0010571:+46900 | Msa1348840:CDS |
| ACATAGCCTCCAACCCTCCA+TGG | 0.523096 | tig0010571:-45607 | None:intergenic |
| GGAAGCTGAGAAAATGATTG+TGG | 0.525325 | tig0010571:+47244 | Msa1348840:CDS |
| TCGTTACAGACTCATTTGCT+TGG | 0.526301 | tig0010571:+43423 | Msa1348840:intron |
| TAACATCCCGCCGAACCTCC+TGG | 0.526713 | tig0010571:-46840 | None:intergenic |
| AAAGACAAAGCACCAAGTCT+TGG | 0.528110 | tig0010571:+41962 | Msa1348840:CDS |
| GGCACTTAAGAAGCAAGGTT+AGG | 0.528234 | tig0010571:-43184 | None:intergenic |
| TAGCATTTCTTTCCACGGAA+AGG | 0.528323 | tig0010571:+47288 | Msa1348840:CDS |
| AACCAGGGTGAAAGTGAGGC+GGG | 0.528592 | tig0010571:+46892 | Msa1348840:CDS |
| TCCATCAACGTCGACGTCGC+CGG | 0.529306 | tig0010571:-40566 | None:intergenic |
| GGAAGAGGATGAATACGTTC+CGG | 0.529989 | tig0010571:-40333 | None:intergenic |
| CCACGTCCCTAAGTAGTTCG+AGG | 0.530299 | tig0010571:+45058 | Msa1348840:CDS |
| TCATCGAGTCATGTAGAATA+CGG | 0.530850 | tig0010571:+47833 | Msa1348840:CDS |
| TTGCCTCCTTACTGCTGTCA+AGG | 0.531934 | tig0010571:+45359 | Msa1348840:CDS |
| CTTCAGGCACTTAAGAAGCA+AGG | 0.532826 | tig0010571:-43189 | None:intergenic |
| TGGCATTCTTCGACAAGATG+AGG | 0.532898 | tig0010571:-40208 | None:intergenic |
| ATCATCCTCATCAAATGCAA+AGG | 0.533512 | tig0010571:-45139 | None:intergenic |
| GATGACGGTGAGCTGAAAGA+AGG | 0.533860 | tig0010571:-45653 | None:intergenic |
| GTTAGAATTCTTAATAGAAG+AGG | 0.534143 | tig0010571:-44590 | None:intergenic |
| ATCAGCTCCGTAAAAGACAA+TGG | 0.535349 | tig0010571:-43477 | None:intergenic |
| GTCATTAAGCTTGTTATCAA+CGG | 0.536873 | tig0010571:-43710 | None:intergenic |
| GCTTCTAGCATTTCTTTCCA+CGG | 0.540958 | tig0010571:+47283 | Msa1348840:CDS |
| GCTTGGACCAGGAGGTTCGG+CGG | 0.541959 | tig0010571:+46833 | Msa1348840:CDS |
| AGTCAAGAAGAGTCAAGTGA+TGG | 0.542611 | tig0010571:+45276 | Msa1348840:CDS |
| AAGAATGTTCACTTTACTGA+AGG | 0.548743 | tig0010571:+44805 | Msa1348840:CDS |
| ATGATATTGCGCCCTCTAAG+TGG | 0.550332 | tig0010571:+45157 | Msa1348840:CDS |
| GTCATCCTCATCAAATGCAA+AGG | 0.550505 | tig0010571:-44863 | None:intergenic |
| TCATCCTCATCAAATGCAAA+GGG | 0.551115 | tig0010571:-44862 | None:intergenic |
| GGAAGAATCTTGAGAAGAGA+AGG | 0.551273 | tig0010571:-40429 | None:intergenic |
| TGAGAACGGCATATAAAAGT+TGG | 0.552352 | tig0010571:-47959 | None:intergenic |
| AACATTGCTGACTATGGAGA+AGG | 0.554008 | tig0010571:+42168 | Msa1348840:CDS |
| GAGGCAATCAGTTAGAAGGC+TGG | 0.554722 | tig0010571:-45343 | None:intergenic |
| GTTGCAGCTGCAAGATTGCT+GGG | 0.555283 | tig0010571:-41104 | None:intergenic |
| CTCAAGATTCTTCCTCTCAG+TGG | 0.555445 | tig0010571:+40438 | Msa1348840:CDS |
| AGCAAGTCTTGTACCTGTGT+TGG | 0.555893 | tig0010571:+47449 | Msa1348840:CDS |
| GAATTACAATGGTGTGGAGA+GGG | 0.556952 | tig0010571:+44567 | Msa1348840:CDS |
| GGCATTCTTCGACAAGATGA+GGG | 0.557708 | tig0010571:-40207 | None:intergenic |
| AAAATACCTTGACAGCAGTA+AGG | 0.558563 | tig0010571:-45365 | None:intergenic |
| AAGGCGAAATCGGGGTAGAG+TGG | 0.559686 | tig0010571:-40410 | None:intergenic |
| GTCGACGTTGATGGAGGCGC+AGG | 0.560181 | tig0010571:+40574 | Msa1348840:CDS |
| GTGGTCGACGGGAGCCAAAG+AGG | 0.560430 | tig0010571:+40507 | Msa1348840:CDS |
| GATCCTGCTGCTGTTCTACA+AGG | 0.563168 | tig0010571:+47215 | Msa1348840:CDS |
| GCTCTTGATGGACTTCGGAA+AGG | 0.566388 | tig0010571:+40638 | Msa1348840:CDS |
| GGTTACACACAGACTATGCT+AGG | 0.569287 | tig0010571:-48067 | None:intergenic |
| GTCAACCGATTCGAATCAGA+AGG | 0.570204 | tig0010571:+40660 | Msa1348840:CDS |
| CAGAAACCTCTGGTGCTGTA+CGG | 0.570807 | tig0010571:+42776 | Msa1348840:intron |
| AATTGCTGCCCATGGAGGGT+TGG | 0.571145 | tig0010571:+45598 | Msa1348840:CDS |
| ATGACGGTGAGCTGAAAGAA+GGG | 0.571829 | tig0010571:-45652 | None:intergenic |
| CCCAACTATTGACATGTGCT+CGG | 0.574965 | tig0010571:+44626 | Msa1348840:CDS |
| TTTATCTGAGCAAAGGATGA+CGG | 0.575426 | tig0010571:-45668 | None:intergenic |
| CTCCCGCCTCACTTTCACCC+TGG | 0.576417 | tig0010571:-46894 | None:intergenic |
| TGGTCGACGGGAGCCAAAGA+GGG | 0.577988 | tig0010571:+40508 | Msa1348840:CDS |
| GCTTGTAAATCTGGTTGAGA+AGG | 0.578725 | tig0010571:+45781 | Msa1348840:CDS |
| AGATCCATTTGCATTTGATG+AGG | 0.578867 | tig0010571:+44996 | Msa1348840:CDS |
| CAATTAATTGCTGCCCATGG+AGG | 0.579731 | tig0010571:+45593 | Msa1348840:CDS |
| GAAGGCTTCTTCGTTCTCAA+GGG | 0.581373 | tig0010571:+40729 | Msa1348840:CDS |
| GAATTGTCATTCAGATCTGA+AGG | 0.585420 | tig0010571:+42870 | Msa1348840:CDS |
| TGATATTGCGCCCTCTAAGT+GGG | 0.585660 | tig0010571:+45158 | Msa1348840:CDS |
| CATCGCTGGCCATAAAGAAA+GGG | 0.587555 | tig0010571:-43732 | None:intergenic |
| CATAGCCTCCAACCCTCCAT+GGG | 0.588009 | tig0010571:-45606 | None:intergenic |
| AGACCCCTTTGCATTTGATG+AGG | 0.588194 | tig0010571:+45134 | Msa1348840:CDS |
| GAAAGGAAAGTTGAGTCCTA+AGG | 0.588906 | tig0010571:+43449 | Msa1348840:CDS |
| GTAAATCTGGTTGAGAAGGA+TGG | 0.589105 | tig0010571:+45785 | Msa1348840:CDS |
| TCAGTTTACGAGAAGTACCC+CGG | 0.590409 | tig0010571:+44951 | Msa1348840:CDS |
| GTATCAGTAGTTGATGTGCT+AGG | 0.592926 | tig0010571:-44679 | None:intergenic |
| ATCCAGTTCAGAATCATCGC+TGG | 0.594748 | tig0010571:-43746 | None:intergenic |
| AGCTTGTTATCAACGGACAC+AGG | 0.596570 | tig0010571:-43703 | None:intergenic |
| GCATCTAACTGACCACGAGT+TGG | 0.597868 | tig0010571:+45733 | Msa1348840:CDS |
| CAGTAGGAATTACAATGGTG+TGG | 0.598823 | tig0010571:+44561 | Msa1348840:CDS |
| AGGCGAAATCGGGGTAGAGT+GGG | 0.599359 | tig0010571:-40409 | None:intergenic |
| ATAAGAAGTTCACCTTTCCG+TGG | 0.602713 | tig0010571:-47300 | None:intergenic |
| AATTAATTGCTGCCCATGGA+GGG | 0.603684 | tig0010571:+45594 | Msa1348840:CDS |
| TGATCCCTTTGCATTTGATG+AGG | 0.604280 | tig0010571:+44858 | Msa1348840:CDS |
| TTCAGAAGGCTTGGACCAGG+AGG | 0.605157 | tig0010571:+46825 | Msa1348840:CDS |
| GATAGTAGGTCCCACTTAGA+GGG | 0.607332 | tig0010571:-45168 | None:intergenic |
| AAGAGTATATGCGTTGAGAA+CGG | 0.610821 | tig0010571:-47973 | None:intergenic |
| GTCAAGAAGAGTCAAGTGAT+GGG | 0.610912 | tig0010571:+45277 | Msa1348840:CDS |
| GGCTAACCAGGGTGAAAGTG+AGG | 0.611463 | tig0010571:+46888 | Msa1348840:CDS |
| ATTAGAAATTTAACACAACA+AGG | 0.611971 | tig0010571:-41905 | None:intergenic |
| TACTTGTGTACAGAAACCTC+TGG | 0.614836 | tig0010571:+42766 | Msa1348840:intron |
| CGGAGATCGGTGGTTTACGG+TGG | 0.618574 | tig0010571:-40262 | None:intergenic |
| CCTCGAACTACTTAGGGACG+TGG | 0.619708 | tig0010571:-45058 | None:intergenic |
| CATCTTCCAAGATTACAACC+GGG | 0.621126 | tig0010571:-45107 | None:intergenic |
| TCACTTTAAGGAACGTACCC+CGG | 0.622558 | tig0010571:+45089 | Msa1348840:CDS |
| ATACATACTCACTAAAGATG+AGG | 0.627563 | tig0010571:+44698 | Msa1348840:CDS |
| ACTACTGCAAGAACCAGATG+TGG | 0.629778 | tig0010571:-44731 | None:intergenic |
| AGTCTTCCGTACAGCACCAG+AGG | 0.630144 | tig0010571:-42782 | None:intergenic |
| GATGATGGAGCAAAATGATG+AGG | 0.630944 | tig0010571:+40607 | Msa1348840:CDS |
| ATCGTCGATTGAATTGGGGT+CGG | 0.632919 | tig0010571:-40474 | None:intergenic |
| CAAAATCGTCGATTGAATTG+GGG | 0.633287 | tig0010571:-40478 | None:intergenic |
| GGCGACGTCGACGTTGATGG+AGG | 0.633323 | tig0010571:+40568 | Msa1348840:CDS |
| GACCAGAGTTATGCCCAAAG+TGG | 0.635018 | tig0010571:+42143 | Msa1348840:CDS |
| GGAATTACAATGGTGTGGAG+AGG | 0.637221 | tig0010571:+44566 | Msa1348840:CDS |
| ACCACAAATCTGTCCAACAC+AGG | 0.637664 | tig0010571:-47462 | None:intergenic |
| TAACCAGGGTGAAAGTGAGG+CGG | 0.641799 | tig0010571:+46891 | Msa1348840:CDS |
| TGTCAATTAATTGCTGCCCA+TGG | 0.645816 | tig0010571:+45590 | Msa1348840:CDS |
| GATTGTCAGCAATTGCTGCA+CGG | 0.645862 | tig0010571:-47410 | None:intergenic |
| GTTATCAACGGACACAGGAG+AGG | 0.648725 | tig0010571:-43698 | None:intergenic |
| TGAAGAAGGAAGTAGAACAC+TGG | 0.658167 | tig0010571:-46806 | None:intergenic |
| ATACCTTGACAGCAGTAAGG+AGG | 0.658288 | tig0010571:-45362 | None:intergenic |
| CAACGTGTCAGAATAACAGT+GGG | 0.658807 | tig0010571:+42113 | Msa1348840:CDS |
| AGTTCCAGTAGGAATTACAA+TGG | 0.660824 | tig0010571:+44556 | Msa1348840:CDS |
| TCAGCTTACGGAAAGTACCT+CGG | 0.663442 | tig0010571:+38201 | Msa1348840:five_prime_UTR |
| GCATTTGATGAGGATGACAG+TGG | 0.664713 | tig0010571:+44868 | Msa1348840:CDS |
| GCAACGTGTCAGAATAACAG+TGG | 0.667678 | tig0010571:+42112 | Msa1348840:CDS |
| GCATCTCCGTATCACCAGCA+TGG | 0.672316 | tig0010571:-48007 | None:intergenic |
| TATCTTCCAAGATTACAACC+GGG | 0.672434 | tig0010571:-44969 | None:intergenic |
| ATCTTCCAAGATCGCAACCG+AGG | 0.673016 | tig0010571:-38218 | None:intergenic |
| CAACAAGAAAATCCAACTCG+TGG | 0.673146 | tig0010571:-45745 | None:intergenic |
| ATCGAAGAAAGACCACTGAG+AGG | 0.674356 | tig0010571:-40450 | None:intergenic |
| GAGAAGAGAAGGCGAAATCG+GGG | 0.675031 | tig0010571:-40418 | None:intergenic |
| CTATATCCATTAGTTCCAGT+AGG | 0.678113 | tig0010571:+44545 | Msa1348840:CDS |
| CTAAGTGGGACCTACTATCG+GGG | 0.685030 | tig0010571:+45172 | Msa1348840:CDS |
| ATCTTCCAAGATTACAACCG+GGG | 0.693882 | tig0010571:-45106 | None:intergenic |
| TCAACCGATTCGAATCAGAA+GGG | 0.696369 | tig0010571:+40661 | Msa1348840:CDS |
| ATCTTCCAAGATTACAACCG+GGG | 0.696587 | tig0010571:-44968 | None:intergenic |
| GCATTTGATGAGGATGACAG+TGG | 0.696947 | tig0010571:+45006 | Msa1348840:CDS |
| CATCCTCATCAAATGCAAAG+GGG | 0.707305 | tig0010571:-45137 | None:intergenic |
| ACAAATCCTAAAGCAAGACG+TGG | 0.707763 | tig0010571:-47885 | None:intergenic |
| GGTGCTGTACGGAAGACTGG+TGG | 0.712043 | tig0010571:+42787 | Msa1348840:CDS |
| CAGCTCCGTAAAAGACAATG+GGG | 0.716546 | tig0010571:-43475 | None:intergenic |
| TATCTTCCAAGACTACAACA+GGG | 0.759615 | tig0010571:-44831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTTTTATGTTTTTTTATT+AGG | - | tig0010571:39457-39476 | None:intergenic | 10.0% |
| !! | AATAATTAATAATATATGCA+AGG | + | tig0010571:39657-39676 | Msa1348840:intron | 10.0% |
| !!! | ATAATATTTACTTTTTTTTG+TGG | + | tig0010571:39771-39790 | Msa1348840:intron | 10.0% |
| !!! | AAAATTTTGAATTTTGAATT+TGG | + | tig0010571:40860-40879 | Msa1348840:intron | 10.0% |
| !!! | AAATTTTGAATTTTGAATTT+GGG | + | tig0010571:40861-40880 | Msa1348840:intron | 10.0% |
| !!! | ATTTAATAATTTTCAATATC+AGG | - | tig0010571:42428-42447 | None:intergenic | 10.0% |
| !! | TATTAAATTTCATAATTTGA+TGG | + | tig0010571:42440-42459 | Msa1348840:intron | 10.0% |
| !!! | TAAAAAAAACATTTTATAAG+TGG | - | tig0010571:43271-43290 | None:intergenic | 10.0% |
| !!! | TTGTTTAATAATTTTATTCT+CGG | + | tig0010571:43570-43589 | Msa1348840:intron | 10.0% |
| !! | TTATCATTAAATAAATCAAA+TGG | - | tig0010571:46449-46468 | None:intergenic | 10.0% |
| !! | AATGAACAAAAAAATTAAAA+GGG | - | tig0010571:47708-47727 | None:intergenic | 10.0% |
| !! | TATACAAAAAAAATAATAGT+AGG | + | tig0010571:48033-48052 | Msa1348840:three_prime_UTR | 10.0% |
| !! | AAAAAAAAAATTACAACTAT+TGG | - | tig0010571:48091-48110 | None:intergenic | 10.0% |
| !!! | TTAATAAGTAGTTTTGTAAT+TGG | + | tig0010571:39271-39290 | Msa1348840:intron | 15.0% |
| !! | AAAAGATAAATATTTACGTT+TGG | + | tig0010571:39470-39489 | Msa1348840:intron | 15.0% |
| !!! | TTTCTTTTTTCCAATTTTAT+CGG | - | tig0010571:39537-39556 | None:intergenic | 15.0% |
| !!! | AAAAGTTTGTTTTTTTTTTG+AGG | + | tig0010571:39868-39887 | Msa1348840:intron | 15.0% |
| !!! | GATTATTATGCTTTATTTAT+AGG | + | tig0010571:41030-41049 | Msa1348840:intron | 15.0% |
| !!! | TTAACTAATGATAAGTTTTT+TGG | + | tig0010571:41207-41226 | Msa1348840:intron | 15.0% |
| !!! | GATTGAAAATCTATTTTTTA+GGG | - | tig0010571:41345-41364 | None:intergenic | 15.0% |
| !!! | TTTTTTTGAATGTTATGTTA+TGG | + | tig0010571:42737-42756 | Msa1348840:intron | 15.0% |
| !!! | TTTTTTGAATGTTATGTTAT+GGG | + | tig0010571:42738-42757 | Msa1348840:intron | 15.0% |
| !! | TAAAATTATTAAACAAGGAA+AGG | - | tig0010571:43566-43585 | None:intergenic | 15.0% |
| !! | GAGAATAAAATTATTAAACA+AGG | - | tig0010571:43571-43590 | None:intergenic | 15.0% |
| !! | ATCTAGAAAATAAAAGTTAT+TGG | - | tig0010571:43659-43678 | None:intergenic | 15.0% |
| !!! | AGTTTTAAACATCAATATTT+CGG | + | tig0010571:46512-46531 | Msa1348840:intron | 15.0% |
| !! | AAGAATTCTAACTAAAAAAT+TGG | - | tig0010571:46961-46980 | None:intergenic | 15.0% |
| !! | AAAGCAAAAATTTAAACAAA+AGG | - | tig0010571:47338-47357 | None:intergenic | 15.0% |
| !! | ATGAACAAAAAAATTAAAAG+GGG | - | tig0010571:47707-47726 | None:intergenic | 15.0% |
| !! | GAATGAACAAAAAAATTAAA+AGG | - | tig0010571:47709-47728 | None:intergenic | 15.0% |
| !! | TGACGATTTAAATAAAAATG+AGG | + | tig0010571:38412-38431 | Msa1348840:intron | 20.0% |
| !! | GTATGTGAATGTTTAAAAAT+GGG | + | tig0010571:38434-38453 | Msa1348840:intron | 20.0% |
| !!! | AACTAGTGTTTTTTATCAAT+AGG | - | tig0010571:39245-39264 | None:intergenic | 20.0% |
| !! | ATTATTCTTTGACAAAATGA+GGG | - | tig0010571:39749-39768 | None:intergenic | 20.0% |
| !! | AATTATTCTTTGACAAAATG+AGG | - | tig0010571:39750-39769 | None:intergenic | 20.0% |
| !!! | ATATTTACTTTTTTTTGTGG+TGG | + | tig0010571:39774-39793 | Msa1348840:intron | 20.0% |
| !!! | ACAAAATAAACTTTTTTGCA+AGG | - | tig0010571:39831-39850 | None:intergenic | 20.0% |
| !! | AAATCAAAAGCTGAAAATAA+CGG | + | tig0010571:39965-39984 | Msa1348840:intron | 20.0% |
| !! | ACAAAAAGAAAAAGAAGAAT+GGG | - | tig0010571:40171-40190 | None:intergenic | 20.0% |
| !! | AACAAAAAGAAAAAGAAGAA+TGG | - | tig0010571:40172-40191 | None:intergenic | 20.0% |
| !!! | TTAGTTTCTTTGTTTTAGAT+TGG | + | tig0010571:40927-40946 | Msa1348840:intron | 20.0% |
| !!! | ATTATGCTTTATTTATAGGA+TGG | + | tig0010571:41034-41053 | Msa1348840:intron | 20.0% |
| !! | ACTAGTTAAAATGTAGAAAA+GGG | - | tig0010571:41129-41148 | None:intergenic | 20.0% |
| !!! | CGATTGAAAATCTATTTTTT+AGG | - | tig0010571:41346-41365 | None:intergenic | 20.0% |
| !! | AAAGCAAAACTAATATTGTT+GGG | + | tig0010571:41455-41474 | Msa1348840:intron | 20.0% |
| !! | AACAAATGGAAAAATAATTG+TGG | - | tig0010571:41504-41523 | None:intergenic | 20.0% |
| !! | AAAAAATTATAACTTGGACA+CGG | - | tig0010571:41627-41646 | None:intergenic | 20.0% |
| !! | ATTAGAAATTTAACACAACA+AGG | - | tig0010571:41908-41927 | None:intergenic | 20.0% |
| !! | AATGATACAAGCAAAAAAAA+AGG | - | tig0010571:42241-42260 | None:intergenic | 20.0% |
| !!! | AATAATTTTCAATATCAGGA+TGG | - | tig0010571:42424-42443 | None:intergenic | 20.0% |
| !! | TGTTAATTCTTAACTTATAG+AGG | + | tig0010571:42472-42491 | Msa1348840:intron | 20.0% |
| !! | GTTAATTCTTAACTTATAGA+GGG | + | tig0010571:42473-42492 | Msa1348840:intron | 20.0% |
| !!! | GTTTTAGATTAATTTATGTG+CGG | - | tig0010571:42525-42544 | None:intergenic | 20.0% |
| !! | TAATTTGAATTATTTGCATG+TGG | - | tig0010571:42591-42610 | None:intergenic | 20.0% |
| !!! | TTTTTGAATGTTATGTTATG+GGG | + | tig0010571:42739-42758 | Msa1348840:intron | 20.0% |
| !!! | CAATTTTAAGGAAAAACTAA+GGG | + | tig0010571:42810-42829 | Msa1348840:CDS | 20.0% |
| !! | AATTGATATAGTCTATAACA+GGG | + | tig0010571:42967-42986 | Msa1348840:intron | 20.0% |
| !!! | TTTTTCATTTCTCAAATCTT+TGG | - | tig0010571:43153-43172 | None:intergenic | 20.0% |
| !!! | GATTTTATTAGCTTACTTTT+CGG | + | tig0010571:43600-43619 | Msa1348840:intron | 20.0% |
| !!! | ATTGCTTCAATTGTTTTTTT+AGG | + | tig0010571:43922-43941 | Msa1348840:intron | 20.0% |
| !! | AGTCAATAAAATCAAATCAA+GGG | - | tig0010571:44217-44236 | None:intergenic | 20.0% |
| !!! | AATCTGTGATTTTAATCTAA+TGG | - | tig0010571:44283-44302 | None:intergenic | 20.0% |
| !!! | ATGACTATTTTAACTTTTAG+AGG | - | tig0010571:44426-44445 | None:intergenic | 20.0% |
| !! | TCTAAAAGTTAAAATAGTCA+TGG | + | tig0010571:44425-44444 | Msa1348840:intron | 20.0% |
| !!! | AACTCATTCTAAAAAACATA+AGG | + | tig0010571:45206-45225 | Msa1348840:CDS | 20.0% |
| !! | ACATTAACATAAATGATACA+TGG | - | tig0010571:45408-45427 | None:intergenic | 20.0% |
| !! | AATGTCTTCTCATAAAATTA+TGG | + | tig0010571:45423-45442 | Msa1348840:intron | 20.0% |
| !!! | GAACTAATGATGTTTTTTTT+TGG | + | tig0010571:45853-45872 | Msa1348840:intron | 20.0% |
| !!! | TAAGATTTTAGTGTTCTTTT+TGG | + | tig0010571:45902-45921 | Msa1348840:intron | 20.0% |
| !! | ATCCATAACATATTAAGAAA+TGG | - | tig0010571:46191-46210 | None:intergenic | 20.0% |
| !! | AGTCTCTATTTATCTTTATA+TGG | + | tig0010571:46254-46273 | Msa1348840:intron | 20.0% |
| !!! | AAATCAAATGGATTAAGAAT+GGG | - | tig0010571:46437-46456 | None:intergenic | 20.0% |
| !!! | TAAATCAAATGGATTAAGAA+TGG | - | tig0010571:46438-46457 | None:intergenic | 20.0% |
| !! | ACATGATTAAAAAAAGGTTA+TGG | - | tig0010571:46490-46509 | None:intergenic | 20.0% |
| !! | AACTGTACATGATTAAAAAA+AGG | - | tig0010571:46496-46515 | None:intergenic | 20.0% |
| !! | TAAATCAAAGAGATTAAGAA+AGG | - | tig0010571:46641-46660 | None:intergenic | 20.0% |
| !!! | ATTATTATGCTCTATTTTCT+TGG | + | tig0010571:46867-46886 | Msa1348840:CDS | 20.0% |
| !! | ATAGAATTACTACTTTGATT+TGG | + | tig0010571:47063-47082 | Msa1348840:intron | 20.0% |
| !! | ATAAGTAAACACAAGATTAA+GGG | - | tig0010571:47188-47207 | None:intergenic | 20.0% |
| !! | CAAAAAAAATAATAGTAGGA+TGG | + | tig0010571:48037-48056 | Msa1348840:three_prime_UTR | 20.0% |
| ! | AAAGTGGAAAAACATTTAGA+CGG | + | tig0010571:38378-38397 | Msa1348840:intron | 25.0% |
| ! | GGTATGTGAATGTTTAAAAA+TGG | + | tig0010571:38433-38452 | Msa1348840:intron | 25.0% |
| !!! | TTGATTTGTAAAGCTAATGA+CGG | - | tig0010571:38507-38526 | None:intergenic | 25.0% |
| ! | TTATACCTAAAGAAAAGAAG+AGG | - | tig0010571:38577-38596 | None:intergenic | 25.0% |
| ! | AATCCCATAAACTTTAGATA+TGG | + | tig0010571:38596-38615 | Msa1348840:intron | 25.0% |
| !! | GTACCATATCTAAAGTTTAT+GGG | - | tig0010571:38602-38621 | None:intergenic | 25.0% |
| !!! | ACAATGTTTTGATGAAATAG+TGG | - | tig0010571:38855-38874 | None:intergenic | 25.0% |
| ! | AACCGACACTTAATTTAAAA+CGG | - | tig0010571:39211-39230 | None:intergenic | 25.0% |
| ! | TTTATCAATAGGAGAACAAA+AGG | - | tig0010571:39234-39253 | None:intergenic | 25.0% |
| ! | AGATAAATATTTACGTTTGG+AGG | + | tig0010571:39473-39492 | Msa1348840:intron | 25.0% |
| !!! | TTTTATCTAAAATGTCCCTT+CGG | + | tig0010571:39505-39524 | Msa1348840:intron | 25.0% |
| ! | ATTCTTCGATAAAAAATCTG+TGG | - | tig0010571:39717-39736 | None:intergenic | 25.0% |
| ! | GCAGTAACTACTTAATAATA+TGG | - | tig0010571:39925-39944 | None:intergenic | 25.0% |
| !!! | ACAATAGTTGATGGAATTTT+GGG | + | tig0010571:41062-41081 | Msa1348840:CDS | 25.0% |
| ! | CACTAGTTAAAATGTAGAAA+AGG | - | tig0010571:41130-41149 | None:intergenic | 25.0% |
| ! | AAATGTAGAATCAAACAAGT+GGG | - | tig0010571:41264-41283 | None:intergenic | 25.0% |
| ! | TTGTTTGATTCTACATTTGA+AGG | + | tig0010571:41266-41285 | Msa1348840:intron | 25.0% |
| ! | AATATTTCAGTACCAAGATT+TGG | + | tig0010571:41296-41315 | Msa1348840:intron | 25.0% |
| ! | CAAAGCAAAACTAATATTGT+TGG | + | tig0010571:41454-41473 | Msa1348840:intron | 25.0% |
| !!! | ATAATTGTGGACTGTAATTT+TGG | - | tig0010571:41491-41510 | None:intergenic | 25.0% |
| !! | TTCCAATTTTGTCATTCAAA+TGG | - | tig0010571:41539-41558 | None:intergenic | 25.0% |
| ! | AGCATAGACAGTAAAAATAA+GGG | - | tig0010571:41848-41867 | None:intergenic | 25.0% |
| ! | AAGCATAGACAGTAAAAATA+AGG | - | tig0010571:41849-41868 | None:intergenic | 25.0% |
| ! | TACAATTAACTAGAACTTCT+TGG | - | tig0010571:42081-42100 | None:intergenic | 25.0% |
| !! | AGTAAAGAGATTTTGTAATC+AGG | + | tig0010571:42362-42381 | Msa1348840:intron | 25.0% |
| ! | TTTCATAATTTGATGGAATC+TGG | + | tig0010571:42447-42466 | Msa1348840:intron | 25.0% |
| ! | ACATGTAAATTATGTTCTCT+TGG | + | tig0010571:42556-42575 | Msa1348840:intron | 25.0% |
| !! | TTTTGAATGTTATGTTATGG+GGG | + | tig0010571:42740-42759 | Msa1348840:intron | 25.0% |
| !!! | GCAATTTTAAGGAAAAACTA+AGG | + | tig0010571:42809-42828 | Msa1348840:CDS | 25.0% |
| ! | GAATTGATATAGTCTATAAC+AGG | + | tig0010571:42966-42985 | Msa1348840:intron | 25.0% |
| !! | AATTCTGAAAGACAAATTCA+TGG | - | tig0010571:43106-43125 | None:intergenic | 25.0% |
| ! | ATTTGTCTTTCAGAATTGTA+AGG | + | tig0010571:43109-43128 | Msa1348840:intron | 25.0% |
| ! | ATAAAAGATTTGCAGTGATT+TGG | - | tig0010571:43873-43892 | None:intergenic | 25.0% |
| !! | TCTTATCTTTTCTTCTAGAT+AGG | + | tig0010571:43895-43914 | Msa1348840:intron | 25.0% |
| !!! | CTTCAATTGTTTTTTTAGGT+GGG | + | tig0010571:43926-43945 | Msa1348840:intron | 25.0% |
| !!! | TGTTAATTCATTTTTACTCC+AGG | + | tig0010571:44113-44132 | Msa1348840:intron | 25.0% |
| !!! | GTTAATTCATTTTTACTCCA+GGG | + | tig0010571:44114-44133 | Msa1348840:intron | 25.0% |
| ! | GAGTCAATAAAATCAAATCA+AGG | - | tig0010571:44218-44237 | None:intergenic | 25.0% |
| !!! | TTTGATTTTATTGACTCTGT+TGG | + | tig0010571:44221-44240 | Msa1348840:intron | 25.0% |
| ! | AAATCACAGATTGTTTATTC+AGG | + | tig0010571:44291-44310 | Msa1348840:intron | 25.0% |
| ! | AATCACAGATTGTTTATTCA+GGG | + | tig0010571:44292-44311 | Msa1348840:intron | 25.0% |
| ! | TTAGCATAACCCAAATAATT+CGG | - | tig0010571:44385-44404 | None:intergenic | 25.0% |
| !! | GCATACATAAAGTTTTTCTT+CGG | + | tig0010571:44480-44499 | Msa1348840:intron | 25.0% |
| ! | GTTAGAATTCTTAATAGAAG+AGG | - | tig0010571:44593-44612 | None:intergenic | 25.0% |
| !! | ATTTTCTTTTATCTGAGCAA+AGG | - | tig0010571:45678-45697 | None:intergenic | 25.0% |
| ! | TTAAATTTGAACAGTTGTAC+AGG | + | tig0010571:45944-45963 | Msa1348840:intron | 25.0% |
| ! | CTCCATTTCTTAATATGTTA+TGG | + | tig0010571:46186-46205 | Msa1348840:intron | 25.0% |
| ! | GAAATATTGAAAGAAGTTCT+GGG | - | tig0010571:46407-46426 | None:intergenic | 25.0% |
| ! | TGAAATATTGAAAGAAGTTC+TGG | - | tig0010571:46408-46427 | None:intergenic | 25.0% |
| ! | GGAAGATAAAAAATTTGAAC+TGG | + | tig0010571:46921-46940 | Msa1348840:CDS | 25.0% |
| ! | GTTACAAATATACTGCTTTA+AGG | - | tig0010571:47107-47126 | None:intergenic | 25.0% |
| ! | ATTAAGTGACATAAGCAAAT+CGG | - | tig0010571:47138-47157 | None:intergenic | 25.0% |
| ! | CATAAGTAAACACAAGATTA+AGG | - | tig0010571:47189-47208 | None:intergenic | 25.0% |
| ! | AGCAAATAATTTCATCAACA+TGG | - | tig0010571:47521-47540 | None:intergenic | 25.0% |
| ATTCTTCCTCAAACTACTTA+GGG | - | tig0010571:38317-38336 | None:intergenic | 30.0% | |
| AAGTGGAAAAACATTTAGAC+GGG | + | tig0010571:38379-38398 | Msa1348840:intron | 30.0% | |
| TAGATTATCCACCTTAACTT+GGG | - | tig0010571:38532-38551 | None:intergenic | 30.0% | |
| TTAGATTATCCACCTTAACT+TGG | - | tig0010571:38533-38552 | None:intergenic | 30.0% | |
| TAAAGAAAAGAAGAGGAAAG+AGG | - | tig0010571:38570-38589 | None:intergenic | 30.0% | |
| ! | TCTTTCCTCTTCTTTTCTTT+AGG | + | tig0010571:38569-38588 | Msa1348840:intron | 30.0% |
| ! | GGTACCATATCTAAAGTTTA+TGG | - | tig0010571:38603-38622 | None:intergenic | 30.0% |
| ATTGTTAACACTTCAAGACA+GGG | - | tig0010571:38672-38691 | None:intergenic | 30.0% | |
| AATTGTTAACACTTCAAGAC+AGG | - | tig0010571:38673-38692 | None:intergenic | 30.0% | |
| AGTGTTAACAATTAAACTCG+AGG | + | tig0010571:38680-38699 | Msa1348840:intron | 30.0% | |
| ATACCTTTCTTGAAACATCA+AGG | + | tig0010571:38706-38725 | Msa1348840:intron | 30.0% | |
| TACCTTTCTTGAAACATCAA+GGG | + | tig0010571:38707-38726 | Msa1348840:intron | 30.0% | |
| ! | TTAGTGCTATTAAAACCCAA+GGG | - | tig0010571:38771-38790 | None:intergenic | 30.0% |
| TTTCCAACGAATGAATTGAA+TGG | - | tig0010571:39082-39101 | None:intergenic | 30.0% | |
| !! | CTCCGTTTTAAATTAAGTGT+CGG | + | tig0010571:39206-39225 | Msa1348840:intron | 30.0% |
| GAACTCACATATTTCAAATG+TGG | + | tig0010571:39293-39312 | Msa1348840:intron | 30.0% | |
| GCATAATATATACATGAGCT+GGG | - | tig0010571:39351-39370 | None:intergenic | 30.0% | |
| TGCATAATATATACATGAGC+TGG | - | tig0010571:39352-39371 | None:intergenic | 30.0% | |
| TTCACGAAAAAAACCCTTAT+TGG | + | tig0010571:39388-39407 | Msa1348840:intron | 30.0% | |
| CATGTGTACAAAACCAATAA+GGG | - | tig0010571:39404-39423 | None:intergenic | 30.0% | |
| ! | TTTATCTAAAATGTCCCTTC+GGG | + | tig0010571:39506-39525 | Msa1348840:intron | 30.0% |
| ! | AAGAAGAATGGGAAATTTTC+AGG | - | tig0010571:40160-40179 | None:intergenic | 30.0% |
| TATGTCGATGAATTTGGATT+TGG | - | tig0010571:40231-40250 | None:intergenic | 30.0% | |
| AAAAACGCATCCACAAAAAA+CGG | + | tig0010571:40533-40552 | Msa1348840:CDS | 30.0% | |
| GATTGAATTCACTCTCATAT+AGG | + | tig0010571:40970-40989 | Msa1348840:intron | 30.0% | |
| !!! | GACAATAGTTGATGGAATTT+TGG | + | tig0010571:41061-41080 | Msa1348840:CDS | 30.0% |
| TTACAGTATAACATTCATCC+TGG | - | tig0010571:41185-41204 | None:intergenic | 30.0% | |
| AATGTAGAATCAAACAAGTG+GGG | - | tig0010571:41263-41282 | None:intergenic | 30.0% | |
| CAAATGTAGAATCAAACAAG+TGG | - | tig0010571:41265-41284 | None:intergenic | 30.0% | |
| TGATTCTGAGTTGTAAAGAA+CGG | + | tig0010571:41370-41389 | Msa1348840:intron | 30.0% | |
| GTCCATTTGAATGACAAAAT+TGG | + | tig0010571:41534-41553 | Msa1348840:intron | 30.0% | |
| ! | TTGATAGTTGTGGATACAAT+TGG | - | tig0010571:41944-41963 | None:intergenic | 30.0% |
| TTCTTTACCATCAAGAGAAA+TGG | - | tig0010571:42206-42225 | None:intergenic | 30.0% | |
| AAAAACAGCATTAGCATTAG+AGG | - | tig0010571:42300-42319 | None:intergenic | 30.0% | |
| CATACTTCAATATTCTTCTG+TGG | + | tig0010571:42648-42667 | Msa1348840:intron | 30.0% | |
| TAACTGCACATATTATCCTA+TGG | + | tig0010571:42677-42696 | Msa1348840:intron | 30.0% | |
| AAATACAAAAGAATTGGCGA+TGG | - | tig0010571:43050-43069 | None:intergenic | 30.0% | |
| GGATGCAAATACAAAAGAAT+TGG | - | tig0010571:43056-43075 | None:intergenic | 30.0% | |
| ! | TAGCATTTTCCATTATCTTC+AGG | - | tig0010571:43208-43227 | None:intergenic | 30.0% |
| ! | TGATTTAATTTCCATTGCCT+TGG | + | tig0010571:43291-43310 | Msa1348840:intron | 30.0% |
| ! | TTTTTGATGCATTTGTAGCT+TGG | + | tig0010571:43362-43381 | Msa1348840:intron | 30.0% |
| ATTGTCATTAAAATGCTCTC+AGG | + | tig0010571:43504-43523 | Msa1348840:CDS | 30.0% | |
| !! | TTATTAGCTTACTTTTCGGT+TGG | + | tig0010571:43604-43623 | Msa1348840:intron | 30.0% |
| !! | GTCATTAAGCTTGTTATCAA+CGG | - | tig0010571:43713-43732 | None:intergenic | 30.0% |
| GATCAGTTAAGAGACTATAA+AGG | + | tig0010571:43766-43785 | Msa1348840:CDS | 30.0% | |
| ! | GGTACTAGATTTTTATAAGC+TGG | + | tig0010571:43787-43806 | Msa1348840:intron | 30.0% |
| !!! | GCTTCAATTGTTTTTTTAGG+TGG | + | tig0010571:43925-43944 | Msa1348840:intron | 30.0% |
| TTGCATGTTAATGAAAAGAC+AGG | - | tig0010571:43969-43988 | None:intergenic | 30.0% | |
| ATTACTGAGGTATATGTACT+TGG | + | tig0010571:44018-44037 | Msa1348840:intron | 30.0% | |
| AGTGAAAAAATAAACACGCA+TGG | + | tig0010571:44053-44072 | Msa1348840:intron | 30.0% | |
| GTGAAAAAATAAACACGCAT+GGG | + | tig0010571:44054-44073 | Msa1348840:intron | 30.0% | |
| TAGCATAACCCAAATAATTC+GGG | - | tig0010571:44384-44403 | None:intergenic | 30.0% | |
| TCATTCTCTGCAAATTCAAA+TGG | - | tig0010571:44523-44542 | None:intergenic | 30.0% | |
| !! | ATAGTTGGGTTTTATGAGAA+AGG | - | tig0010571:44615-44634 | None:intergenic | 30.0% |
| ATACATACTCACTAAAGATG+AGG | + | tig0010571:44698-44717 | Msa1348840:CDS | 30.0% | |
| ! | ATTCTTCCTGGAACTATTTT+GGG | - | tig0010571:44791-44810 | None:intergenic | 30.0% |
| AAGAATGTTCACTTTACTGA+AGG | + | tig0010571:44805-44824 | Msa1348840:CDS | 30.0% | |
| ! | ATTCTTCCTGGAACTATTTT+GGG | - | tig0010571:44791-44810 | None:intergenic | 30.0% |
| CAATTAATTGACAGCCAATA+GGG | - | tig0010571:45583-45602 | None:intergenic | 30.0% | |
| AAATTCCTTGAGAACTGAAA+AGG | + | tig0010571:45694-45713 | Msa1348840:CDS | 30.0% | |
| !! | GATTTTCTTGTTGCTATTCT+GGG | + | tig0010571:45755-45774 | Msa1348840:CDS | 30.0% |
| !! | TTAGTGTTCTTTTTGGTCTT+AGG | + | tig0010571:45909-45928 | Msa1348840:intron | 30.0% |
| AAAGAAGTTAACAGAATGGT+TGG | - | tig0010571:46071-46090 | None:intergenic | 30.0% | |
| TGACAAAGAAGTTAACAGAA+TGG | - | tig0010571:46075-46094 | None:intergenic | 30.0% | |
| ACAGTACAATATAACGAGAT+AGG | - | tig0010571:46728-46747 | None:intergenic | 30.0% | |
| ! | TTCTTGTTTCACACATTGTT+TGG | + | tig0010571:46976-46995 | Msa1348840:intron | 30.0% |
| ! | TCTTGTTTCACACATTGTTT+GGG | + | tig0010571:46977-46996 | Msa1348840:intron | 30.0% |
| TTAAGTGACATAAGCAAATC+GGG | - | tig0010571:47137-47156 | None:intergenic | 30.0% | |
| ! | GATTTGCTTATGTCACTTAA+TGG | + | tig0010571:47137-47156 | Msa1348840:intron | 30.0% |
| GATTAAGGGATATTCATCAA+GGG | - | tig0010571:47174-47193 | None:intergenic | 30.0% | |
| AGATTAAGGGATATTCATCA+AGG | - | tig0010571:47175-47194 | None:intergenic | 30.0% | |
| TTGCTTTGTCGCATATATTA+AGG | + | tig0010571:47351-47370 | Msa1348840:intron | 30.0% | |
| TGCTTTGTCGCATATATTAA+GGG | + | tig0010571:47352-47371 | Msa1348840:intron | 30.0% | |
| TTTAATCATAATAGACGCCT+GGG | + | tig0010571:47678-47697 | Msa1348840:intron | 30.0% | |
| !!! | CTTATTTTATATCACCATGC+TGG | + | tig0010571:47993-48012 | Msa1348840:three_prime_UTR | 30.0% |
| TCATCCTCATCAAATGCAAA+TGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
| CATTCTTCCTCAAACTACTT+AGG | - | tig0010571:38318-38337 | None:intergenic | 35.0% | |
| ACAAATCAACACCCAAGTTA+AGG | + | tig0010571:38518-38537 | Msa1348840:intron | 35.0% | |
| TGTTATGATGGTCCTGTTAT+GGG | - | tig0010571:38641-38660 | None:intergenic | 35.0% | |
| ATGTTATGATGGTCCTGTTA+TGG | - | tig0010571:38642-38661 | None:intergenic | 35.0% | |
| AGGGAGAAATCATGTTATGA+TGG | - | tig0010571:38653-38672 | None:intergenic | 35.0% | |
| GTTAACAATTAAACTCGAGG+AGG | + | tig0010571:38683-38702 | Msa1348840:intron | 35.0% | |
| AACCCTTGATGTTTCAAGAA+AGG | - | tig0010571:38712-38731 | None:intergenic | 35.0% | |
| ! | GTTAGTGCTATTAAAACCCA+AGG | - | tig0010571:38772-38791 | None:intergenic | 35.0% |
| AGAAACACAAGAGTAAACTG+CGG | - | tig0010571:39059-39078 | None:intergenic | 35.0% | |
| TCTCCATTCAATTCATTCGT+TGG | + | tig0010571:39076-39095 | Msa1348840:intron | 35.0% | |
| ! | CGACACTTAATTTAAAACGG+AGG | - | tig0010571:39208-39227 | None:intergenic | 35.0% |
| AAGTTGAGAGTGAGATGTTT+GGG | + | tig0010571:39318-39337 | Msa1348840:intron | 35.0% | |
| GCATGTGTACAAAACCAATA+AGG | - | tig0010571:39405-39424 | None:intergenic | 35.0% | |
| ! | TTATCTAAAATGTCCCTTCG+GGG | + | tig0010571:39507-39526 | Msa1348840:intron | 35.0% |
| TATATGCAAGGTCATATGCA+AGG | + | tig0010571:39669-39688 | Msa1348840:intron | 35.0% | |
| CTTCGATAAAAAATCTGTGG+TGG | - | tig0010571:39714-39733 | None:intergenic | 35.0% | |
| ! | TGACAAAATGAGGGCTTTTT+GGG | - | tig0010571:39740-39759 | None:intergenic | 35.0% |
| ! | TTGACAAAATGAGGGCTTTT+TGG | - | tig0010571:39741-39760 | None:intergenic | 35.0% |
| !!! | TTACTTTTTTTTGTGGTGGC+CGG | + | tig0010571:39778-39797 | Msa1348840:intron | 35.0% |
| ! | TTTTTGCAAGGTCATATGCA+AGG | - | tig0010571:39819-39838 | None:intergenic | 35.0% |
| ! | CAGTGTAGTGTTTTTCTAAC+TGG | - | tig0010571:40022-40041 | None:intergenic | 35.0% |
| ! | GTGTGCAATTTTGAATCTGT+GGG | - | tig0010571:40046-40065 | None:intergenic | 35.0% |
| ! | TGTGTGCAATTTTGAATCTG+TGG | - | tig0010571:40047-40066 | None:intergenic | 35.0% |
| !!! | ATCATTTTGGAATCGGAGAT+CGG | - | tig0010571:40278-40297 | None:intergenic | 35.0% |
| !!! | GCGAACAATCATTTTGGAAT+CGG | - | tig0010571:40285-40304 | None:intergenic | 35.0% |
| ! | GTATGTGCGAACAATCATTT+TGG | - | tig0010571:40291-40310 | None:intergenic | 35.0% |
| ! | CAAAATCGTCGATTGAATTG+GGG | - | tig0010571:40481-40500 | None:intergenic | 35.0% |
| ! | CCAAAATCGTCGATTGAATT+GGG | - | tig0010571:40482-40501 | None:intergenic | 35.0% |
| ! | ACCAAAATCGTCGATTGAAT+TGG | - | tig0010571:40483-40502 | None:intergenic | 35.0% |
| !!! | TCAATCGACGATTTTGGTTA+CGG | + | tig0010571:40485-40504 | Msa1348840:CDS | 35.0% |
| !!! | ATACGAGAATCCGTTTTTTG+TGG | - | tig0010571:40546-40565 | None:intergenic | 35.0% |
| ! | AAAAAACGGATTCTCGTATC+CGG | + | tig0010571:40547-40566 | Msa1348840:CDS | 35.0% |
| CATCAGCTAAACATTCATAC+TGG | - | tig0010571:41003-41022 | None:intergenic | 35.0% | |
| ATGGCAAAGACAATAGTTGA+TGG | + | tig0010571:41053-41072 | Msa1348840:CDS | 35.0% | |
| TCGTTTGAGAAAGAAATTCC+AGG | + | tig0010571:41164-41183 | Msa1348840:intron | 35.0% | |
| AATCTACACATGCCAAATCT+TGG | - | tig0010571:41311-41330 | None:intergenic | 35.0% | |
| AGAACGGTGAAATTGATCTA+TGG | + | tig0010571:41386-41405 | Msa1348840:intron | 35.0% | |
| GGACACTTATGGTAAACAAA+TGG | - | tig0010571:41518-41537 | None:intergenic | 35.0% | |
| GTCATTCAAATGGACACTTA+TGG | - | tig0010571:41529-41548 | None:intergenic | 35.0% | |
| !! | TTTCTGAAGTTATTGTCCAG+TGG | + | tig0010571:41759-41778 | Msa1348840:intron | 35.0% |
| TTCTGTTCTGGTATTTGACT+TGG | + | tig0010571:41789-41808 | Msa1348840:intron | 35.0% | |
| TAACACAACAAGGTGATTCA+AGG | - | tig0010571:41898-41917 | None:intergenic | 35.0% | |
| ! | TGCTTTGTCTTTGATAGTTG+TGG | - | tig0010571:41954-41973 | None:intergenic | 35.0% |
| ! | GACTCTAGAAAAAACTGCAA+CGG | - | tig0010571:42059-42078 | None:intergenic | 35.0% |
| TCAGCAATGTTAACCACTTT+GGG | - | tig0010571:42159-42178 | None:intergenic | 35.0% | |
| ! | TTATCTGCCATTTCTCTTGA+TGG | + | tig0010571:42196-42215 | Msa1348840:CDS | 35.0% |
| GAGGAATCAGATAACTAAGA+TGG | - | tig0010571:42281-42300 | None:intergenic | 35.0% | |
| TACTTCTTCTCAGTTTCTGA+AGG | + | tig0010571:42396-42415 | Msa1348840:intron | 35.0% | |
| ATTCGATACAGAAGTTCCAT+AGG | - | tig0010571:42696-42715 | None:intergenic | 35.0% | |
| GAATTGTCATTCAGATCTGA+AGG | + | tig0010571:42870-42889 | Msa1348840:CDS | 35.0% | |
| ACACATCTCAAAGCAAGAAA+TGG | - | tig0010571:43010-43029 | None:intergenic | 35.0% | |
| TCTTAAGTGCCTGAAGATAA+TGG | + | tig0010571:43196-43215 | Msa1348840:CDS | 35.0% | |
| ! | TTTTCTAAGCAAAGACAACC+AGG | + | tig0010571:43229-43248 | Msa1348840:CDS | 35.0% |
| ACTCATTTGCTTGGAATGAA+AGG | + | tig0010571:43432-43451 | Msa1348840:CDS | 35.0% | |
| TCAGGTAATGATCATACACA+GGG | + | tig0010571:43522-43541 | Msa1348840:intron | 35.0% | |
| TTATTGGCACAGATGAGAAA+GGG | - | tig0010571:43643-43662 | None:intergenic | 35.0% | |
| GCTTAATGACCCTTTCTTTA+TGG | + | tig0010571:43723-43742 | Msa1348840:CDS | 35.0% | |
| !! | AGATTTGCTAGAGTTCTATG+TGG | + | tig0010571:43840-43859 | Msa1348840:intron | 35.0% |
| TATATGTACTTGGAAGAGGA+TGG | + | tig0010571:44028-44047 | Msa1348840:intron | 35.0% | |
| ATATGTACTTGGAAGAGGAT+GGG | + | tig0010571:44029-44048 | Msa1348840:intron | 35.0% | |
| AACGAAGAATATAAGAGGGA+AGG | + | tig0010571:44187-44206 | Msa1348840:intron | 35.0% | |
| ACTTAGTCTCCCGAATTATT+TGG | + | tig0010571:44372-44391 | Msa1348840:intron | 35.0% | |
| CTTAGTCTCCCGAATTATTT+GGG | + | tig0010571:44373-44392 | Msa1348840:intron | 35.0% | |
| ! | CTACTGGAACTAATGGATAT+AGG | - | tig0010571:44547-44566 | None:intergenic | 35.0% |
| CTATATCCATTAGTTCCAGT+AGG | + | tig0010571:44545-44564 | Msa1348840:CDS | 35.0% | |
| GTAATTCCTACTGGAACTAA+TGG | - | tig0010571:44554-44573 | None:intergenic | 35.0% | |
| AGTTCCAGTAGGAATTACAA+TGG | + | tig0010571:44556-44575 | Msa1348840:CDS | 35.0% | |
| ! | CATTCTTCCTGGAACTATTT+TGG | - | tig0010571:44792-44811 | None:intergenic | 35.0% |
| AGTAAAGTGAACATTCTTCC+TGG | - | tig0010571:44803-44822 | None:intergenic | 35.0% | |
| TATCTTCCAAGACTACAACA+GGG | - | tig0010571:44834-44853 | None:intergenic | 35.0% | |
| TCATCCTCATCAAATGCAAA+GGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
| ! | CATTCTTCCTGGAACTATTT+TGG | - | tig0010571:44792-44811 | None:intergenic | 35.0% |
| TATCTTCCAAGATTACAACC+GGG | - | tig0010571:44972-44991 | None:intergenic | 35.0% | |
| CTATCTTCCAAGATTACAAC+CGG | - | tig0010571:44973-44992 | None:intergenic | 35.0% | |
| CATCAAATGCAAATGGATCT+TGG | - | tig0010571:44996-45015 | None:intergenic | 35.0% | |
| AGATCCATTTGCATTTGATG+AGG | + | tig0010571:44996-45015 | Msa1348840:CDS | 35.0% | |
| TCATCCTCATCAAATGCAAA+TGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
| ATTCTTCCTCGAACTACTTA+GGG | - | tig0010571:45067-45086 | None:intergenic | 35.0% | |
| GAGGAAGAATGTTCACTTTA+AGG | + | tig0010571:45077-45096 | Msa1348840:CDS | 35.0% | |
| TCATCTTCCAAGATTACAAC+CGG | - | tig0010571:45111-45130 | None:intergenic | 35.0% | |
| TCATCCTCATCAAATGCAAA+GGG | - | tig0010571:38253-38272 | None:intergenic | 35.0% | |
| ATCATCCTCATCAAATGCAA+AGG | - | tig0010571:45142-45161 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTTTCCCCGATAGT+AGG | - | tig0010571:45185-45204 | None:intergenic | 35.0% |
| ! | TGACTCTTCTTGACTCATTT+TGG | - | tig0010571:45271-45290 | None:intergenic | 35.0% |
| GTCATAACTTATGTCAGAAC+TGG | - | tig0010571:45316-45335 | None:intergenic | 35.0% | |
| AAAATACCTTGACAGCAGTA+AGG | - | tig0010571:45368-45387 | None:intergenic | 35.0% | |
| ACACTAACATAGAACACTGA+AGG | - | tig0010571:45487-45506 | None:intergenic | 35.0% | |
| AAATACCTGTGTTGTCTTGT+AGG | + | tig0010571:45532-45551 | Msa1348840:intron | 35.0% | |
| GCAATTAATTGACAGCCAAT+AGG | - | tig0010571:45584-45603 | None:intergenic | 35.0% | |
| GCTATGTCTATGTTAATTGC+TGG | + | tig0010571:45623-45642 | Msa1348840:CDS | 35.0% | |
| TTTATCTGAGCAAAGGATGA+CGG | - | tig0010571:45671-45690 | None:intergenic | 35.0% | |
| AAAAGGACCATCTATGTGAT+AGG | + | tig0010571:45711-45730 | Msa1348840:CDS | 35.0% | |
| TTAGATGCCTATCACATAGA+TGG | - | tig0010571:45721-45740 | None:intergenic | 35.0% | |
| !! | GGATTTTCTTGTTGCTATTC+TGG | + | tig0010571:45754-45773 | Msa1348840:CDS | 35.0% |
| GTCGTAACAGGTAATTTGAT+TGG | + | tig0010571:45807-45826 | Msa1348840:intron | 35.0% | |
| !! | CAGGTAATTTGATTGGTTTC+TGG | + | tig0010571:45814-45833 | Msa1348840:intron | 35.0% |
| !! | AATTTGATTGGTTTCTGGAC+TGG | + | tig0010571:45819-45838 | Msa1348840:intron | 35.0% |
| CTGTTTCAACTTTCAACCTT+CGG | + | tig0010571:46218-46237 | Msa1348840:intron | 35.0% | |
| ACTTGATGAGAAATTTCCGA+AGG | - | tig0010571:46237-46256 | None:intergenic | 35.0% | |
| ! | AAGAGCATAATTCAGAAGCA+CGG | - | tig0010571:46283-46302 | None:intergenic | 35.0% |
| TTGCAAGATTTCACCTTCTT+TGG | + | tig0010571:46330-46349 | Msa1348840:intron | 35.0% | |
| !! | ACCTTCTTTGGCTCTTTAAT+AGG | + | tig0010571:46342-46361 | Msa1348840:intron | 35.0% |
| ACCTATTAAAGAGCCAAAGA+AGG | - | tig0010571:46346-46365 | None:intergenic | 35.0% | |
| TTCGAAATACTGAGAGTTCA+TGG | - | tig0010571:46604-46623 | None:intergenic | 35.0% | |
| TTCCCACTAAGCATAATCTT+TGG | + | tig0010571:46692-46711 | Msa1348840:intron | 35.0% | |
| TGCCAAAGATTATGCTTAGT+GGG | - | tig0010571:46697-46716 | None:intergenic | 35.0% | |
| ATGCCAAAGATTATGCTTAG+TGG | - | tig0010571:46698-46717 | None:intergenic | 35.0% | |
| AAGAGTGACGAATCTTGAAT+GGG | - | tig0010571:46761-46780 | None:intergenic | 35.0% | |
| ! | TCTATTTTCTTGGCTAACCA+GGG | + | tig0010571:46877-46896 | Msa1348840:CDS | 35.0% |
| !!! | GTATTCCTTTTTTGATGCGT+TGG | + | tig0010571:47015-47034 | Msa1348840:intron | 35.0% |
| GCTCTTACTGTAGAACAAAA+GGG | - | tig0010571:47388-47407 | None:intergenic | 35.0% | |
| TGCTCTTACTGTAGAACAAA+AGG | - | tig0010571:47389-47408 | None:intergenic | 35.0% | |
| ! | GATTTGTGGTAAGTAGCTTT+TGG | + | tig0010571:47475-47494 | Msa1348840:intron | 35.0% |
| ! | GATTTAAAACCGCATCTGAA+GGG | + | tig0010571:47635-47654 | Msa1348840:intron | 35.0% |
| GGCGTCTATTATGATTAAAC+AGG | - | tig0010571:47677-47696 | None:intergenic | 35.0% | |
| GTTTAATCATAATAGACGCC+TGG | + | tig0010571:47677-47696 | Msa1348840:intron | 35.0% | |
| TTAATCATAATAGACGCCTG+GGG | + | tig0010571:47679-47698 | Msa1348840:intron | 35.0% | |
| !! | CTAACAGTTTTATGAGTCTC+TGG | - | tig0010571:47808-47827 | None:intergenic | 35.0% |
| TCATCGAGTCATGTAGAATA+CGG | + | tig0010571:47833-47852 | Msa1348840:CDS | 35.0% | |
| GAATACGGTGAAAGATCAAA+TGG | + | tig0010571:47848-47867 | Msa1348840:exon | 35.0% | |
| !! | TTTAGGATTTGTTGCTACTC+AGG | + | tig0010571:47896-47915 | Msa1348840:three_prime_UTR | 35.0% |
| TGAGAACGGCATATAAAAGT+TGG | - | tig0010571:47962-47981 | None:intergenic | 35.0% | |
| ! | AAGAGTATATGCGTTGAGAA+CGG | - | tig0010571:47976-47995 | None:intergenic | 35.0% |
| CATCAAATGCAAATGGATCC+TGG | - | tig0010571:38246-38265 | None:intergenic | 40.0% | |
| GGATCCATTTGCATTTGATG+AGG | + | tig0010571:38246-38265 | Msa1348840:intron | 40.0% | |
| CTCATAAGCGTGCAACAAAA+TGG | - | tig0010571:38348-38367 | None:intergenic | 40.0% | |
| TTGTTGCACGCTTATGAGTT+TGG | + | tig0010571:38350-38369 | Msa1348840:intron | 40.0% | |
| TGTTGCACGCTTATGAGTTT+GGG | + | tig0010571:38351-38370 | Msa1348840:intron | 40.0% | |
| TATGAGTTTGGGTGTGAAAG+TGG | + | tig0010571:38362-38381 | Msa1348840:intron | 40.0% | |
| !! | GACGGTAAAGAAGCGTTTAA+CGG | - | tig0010571:38489-38508 | None:intergenic | 40.0% |
| AATCAACACCCAAGTTAAGG+TGG | + | tig0010571:38521-38540 | Msa1348840:intron | 40.0% | |
| TTATGATGGTCCTGTTATGG+GGG | - | tig0010571:38639-38658 | None:intergenic | 40.0% | |
| GTTATGATGGTCCTGTTATG+GGG | - | tig0010571:38640-38659 | None:intergenic | 40.0% | |
| !!! | ATTGTTTTTTCCTCCTCCCT+TGG | + | tig0010571:38752-38771 | Msa1348840:intron | 40.0% |
| !!! | TTGTTTTTTCCTCCTCCCTT+GGG | + | tig0010571:38753-38772 | Msa1348840:intron | 40.0% |
| TTATAGGTTGTTGTCGGGTT+GGG | - | tig0010571:38930-38949 | None:intergenic | 40.0% | |
| TCTGCTTATAGGTTGTTGTC+GGG | - | tig0010571:38935-38954 | None:intergenic | 40.0% | |
| GTCTGCTTATAGGTTGTTGT+CGG | - | tig0010571:38936-38955 | None:intergenic | 40.0% | |
| CAACAACCTATAAGCAGACA+AGG | + | tig0010571:38937-38956 | Msa1348840:intron | 40.0% | |
| AAGAGTAAACTGCGGTTGTA+CGG | - | tig0010571:39051-39070 | None:intergenic | 40.0% | |
| GTGTTCTTGCATTTCTTCCT+TGG | - | tig0010571:39148-39167 | None:intergenic | 40.0% | |
| ! | CAAGTTGAGAGTGAGATGTT+TGG | + | tig0010571:39317-39336 | Msa1348840:intron | 40.0% |
| AGTTGAGAGTGAGATGTTTG+GGG | + | tig0010571:39319-39338 | Msa1348840:intron | 40.0% | |
| GATAAAAAATCTGTGGTGGC+CGG | - | tig0010571:39710-39729 | None:intergenic | 40.0% | |
| !!! | TACTTTTTTTTGTGGTGGCC+GGG | + | tig0010571:39779-39798 | Msa1348840:intron | 40.0% |
| ACATACGATACGATACGATG+AGG | - | tig0010571:39997-40016 | None:intergenic | 40.0% | |
| ! | TTCCGGAAATTGATGGTTTG+CGG | - | tig0010571:40319-40338 | None:intergenic | 40.0% |
| GAATACGTTCCGGAAATTGA+TGG | - | tig0010571:40326-40345 | None:intergenic | 40.0% | |
| TTGAGAAGAGAAGGCGAAAT+CGG | - | tig0010571:40423-40442 | None:intergenic | 40.0% | |
| GGAAGAATCTTGAGAAGAGA+AGG | - | tig0010571:40432-40451 | None:intergenic | 40.0% | |
| ! | CCCAATTCAATCGACGATTT+TGG | + | tig0010571:40479-40498 | Msa1348840:CDS | 40.0% |
| !! | GATGATGGAGCAAAATGATG+AGG | + | tig0010571:40607-40626 | Msa1348840:CDS | 40.0% |
| GAGGTTAATTTCGCTCTTGA+TGG | + | tig0010571:40626-40645 | Msa1348840:CDS | 40.0% | |
| !! | ATTTCGCTCTTGATGGACTT+CGG | + | tig0010571:40633-40652 | Msa1348840:CDS | 40.0% |
| !! | TCAACCGATTCGAATCAGAA+GGG | + | tig0010571:40661-40680 | Msa1348840:CDS | 40.0% |
| TGTGTGTTGTGTCTCTTTGT+TGG | + | tig0010571:40828-40847 | Msa1348840:intron | 40.0% | |
| GTGTGTTGTGTCTCTTTGTT+GGG | + | tig0010571:40829-40848 | Msa1348840:intron | 40.0% | |
| TGTGTTGTGTCTCTTTGTTG+GGG | + | tig0010571:40830-40849 | Msa1348840:intron | 40.0% | |
| ! | GGAATTTTGAACTGAGTGCA+AGG | + | tig0010571:40948-40967 | Msa1348840:intron | 40.0% |
| AGAACAGAACTATATGCCAC+TGG | - | tig0010571:41778-41797 | None:intergenic | 40.0% | |
| ! | AGTGGCATATAGTTCTGTTC+TGG | + | tig0010571:41777-41796 | Msa1348840:intron | 40.0% |
| ! | ACTGTCTATGCTTTTGTCTC+AGG | + | tig0010571:41856-41875 | Msa1348840:intron | 40.0% |
| ! | CTGTCTATGCTTTTGTCTCA+GGG | + | tig0010571:41857-41876 | Msa1348840:intron | 40.0% |
| ! | AAAGACAAAGCACCAAGTCT+TGG | + | tig0010571:41962-41981 | Msa1348840:CDS | 40.0% |
| AGAAAAAACTGCAACGGAAC+TGG | - | tig0010571:42053-42072 | None:intergenic | 40.0% | |
| CAACGTGTCAGAATAACAGT+GGG | + | tig0010571:42113-42132 | Msa1348840:CDS | 40.0% | |
| GTCAGCAATGTTAACCACTT+TGG | - | tig0010571:42160-42179 | None:intergenic | 40.0% | |
| ! | GTGGTTAACATTGCTGACTA+TGG | + | tig0010571:42162-42181 | Msa1348840:CDS | 40.0% |
| ! | AACATTGCTGACTATGGAGA+AGG | + | tig0010571:42168-42187 | Msa1348840:CDS | 40.0% |
| GGATAATATGTGCAGTTAGC+TGG | - | tig0010571:42675-42694 | None:intergenic | 40.0% | |
| TACTTGTGTACAGAAACCTC+TGG | + | tig0010571:42766-42785 | Msa1348840:intron | 40.0% | |
| ! | GAAGACTGGTGGCAATTTTA+AGG | + | tig0010571:42798-42817 | Msa1348840:CDS | 40.0% |
| AAGGAAAAACTAAGGGAGCA+TGG | + | tig0010571:42817-42836 | Msa1348840:CDS | 40.0% | |
| ACATGCAAAATCCAAGGCAA+TGG | - | tig0010571:43305-43324 | None:intergenic | 40.0% | |
| AGTCACACATGCAAAATCCA+AGG | - | tig0010571:43311-43330 | None:intergenic | 40.0% | |
| TCGTTACAGACTCATTTGCT+TGG | + | tig0010571:43423-43442 | Msa1348840:intron | 40.0% | |
| GAAAGGAAAGTTGAGTCCTA+AGG | + | tig0010571:43449-43468 | Msa1348840:CDS | 40.0% | |
| TCAGCTCCGTAAAAGACAAT+GGG | - | tig0010571:43479-43498 | None:intergenic | 40.0% | |
| ATCAGCTCCGTAAAAGACAA+TGG | - | tig0010571:43480-43499 | None:intergenic | 40.0% | |
| CTCAGGTAATGATCATACAC+AGG | + | tig0010571:43521-43540 | Msa1348840:intron | 40.0% | |
| CAGGTAATGATCATACACAG+GGG | + | tig0010571:43523-43542 | Msa1348840:intron | 40.0% | |
| TCATACACAGGGGTAATTTC+TGG | + | tig0010571:43533-43552 | Msa1348840:intron | 40.0% | |
| GTTATTGGCACAGATGAGAA+AGG | - | tig0010571:43644-43663 | None:intergenic | 40.0% | |
| TTCTAGATCTATGTCTGCGT+CGG | + | tig0010571:43671-43690 | Msa1348840:intron | 40.0% | |
| AATAAGCGCCATCACTCAAT+CGG | - | tig0010571:44001-44020 | None:intergenic | 40.0% | |
| GAGGTATATGTACTTGGAAG+AGG | + | tig0010571:44024-44043 | Msa1348840:intron | 40.0% | |
| AAAATAAACACGCATGGGTG+AGG | + | tig0010571:44059-44078 | Msa1348840:intron | 40.0% | |
| ! | TTTTACTCCAGGGTGAATAC+TGG | + | tig0010571:44124-44143 | Msa1348840:intron | 40.0% |
| TTTACTCCAGGGTGAATACT+GGG | + | tig0010571:44125-44144 | Msa1348840:intron | 40.0% | |
| ! | AATAGTGGGAGGTGGTAATT+TGG | + | tig0010571:44157-44176 | Msa1348840:intron | 40.0% |
| AGGGGAACGAAGAATATAAG+AGG | + | tig0010571:44182-44201 | Msa1348840:intron | 40.0% | |
| GGGGAACGAAGAATATAAGA+GGG | + | tig0010571:44183-44202 | Msa1348840:intron | 40.0% | |
| CAGATTGTTTATTCAGGGTG+TGG | + | tig0010571:44297-44316 | Msa1348840:intron | 40.0% | |
| CACACCATTGTAATTCCTAC+TGG | - | tig0010571:44563-44582 | None:intergenic | 40.0% | |
| CAGTAGGAATTACAATGGTG+TGG | + | tig0010571:44561-44580 | Msa1348840:CDS | 40.0% | |
| GAATTACAATGGTGTGGAGA+GGG | + | tig0010571:44567-44586 | Msa1348840:CDS | 40.0% | |
| TCGGTTGGAAAAATCACTCT+CGG | + | tig0010571:44645-44664 | Msa1348840:CDS | 40.0% | |
| ! | GTATCAGTAGTTGATGTGCT+AGG | - | tig0010571:44682-44701 | None:intergenic | 40.0% |
| AGGATCAATTCATCCACATC+TGG | + | tig0010571:44718-44737 | Msa1348840:CDS | 40.0% | |
| CTATCTTCCAAGACTACAAC+AGG | - | tig0010571:44835-44854 | None:intergenic | 40.0% | |
| CATCAAATGCAAAGGGATCA+TGG | - | tig0010571:44858-44877 | None:intergenic | 40.0% | |
| TGATCCCTTTGCATTTGATG+AGG | + | tig0010571:44858-44877 | Msa1348840:CDS | 40.0% | |
| GTCATCCTCATCAAATGCAA+AGG | - | tig0010571:38254-38273 | None:intergenic | 40.0% | |
| CTATGACCCAAAATAGTTCC+AGG | + | tig0010571:44920-44939 | Msa1348840:CDS | 40.0% | |
| CGTAAACTGAACATTCTTCC+TGG | - | tig0010571:44941-44960 | None:intergenic | 40.0% | |
| ATCTTCCAAGATTACAACCG+GGG | - | tig0010571:44971-44990 | None:intergenic | 40.0% | |
| CATTCTTCCTCGAACTACTT+AGG | - | tig0010571:45068-45087 | None:intergenic | 40.0% | |
| ATCTTCCAAGATTACAACCG+GGG | - | tig0010571:44971-44990 | None:intergenic | 40.0% | |
| CATCTTCCAAGATTACAACC+GGG | - | tig0010571:45110-45129 | None:intergenic | 40.0% | |
| CATCCTCATCAAATGCAAAG+GGG | - | tig0010571:44864-44883 | None:intergenic | 40.0% | |
| AGTCAAGAAGAGTCAAGTGA+TGG | + | tig0010571:45276-45295 | Msa1348840:CDS | 40.0% | |
| GTCAAGAAGAGTCAAGTGAT+GGG | + | tig0010571:45277-45296 | Msa1348840:CDS | 40.0% | |
| TAAGGAGGCAATCAGTTAGA+AGG | - | tig0010571:45350-45369 | None:intergenic | 40.0% | |
| !! | CTGCTGTCAAGGTATTTTAC+TGG | + | tig0010571:45370-45389 | Msa1348840:intron | 40.0% |
| TTGACTAACGACAACCCTAT+TGG | + | tig0010571:45566-45585 | Msa1348840:CDS | 40.0% | |
| TGTCAATTAATTGCTGCCCA+TGG | + | tig0010571:45590-45609 | Msa1348840:CDS | 40.0% | |
| AATTAATTGCTGCCCATGGA+GGG | + | tig0010571:45594-45613 | Msa1348840:CDS | 40.0% | |
| ! | ATGGTCCTTTTCAGTTCTCA+AGG | - | tig0010571:45702-45721 | None:intergenic | 40.0% |
| CAACAAGAAAATCCAACTCG+TGG | - | tig0010571:45748-45767 | None:intergenic | 40.0% | |
| GCTTGTAAATCTGGTTGAGA+AGG | + | tig0010571:45781-45800 | Msa1348840:CDS | 40.0% | |
| GTAAATCTGGTTGAGAAGGA+TGG | + | tig0010571:45785-45804 | Msa1348840:CDS | 40.0% | |
| CTGTTGTTCTTCACTTAGCA+TGG | + | tig0010571:46045-46064 | Msa1348840:intron | 40.0% | |
| TACTGAGAGTTCATGGATGT+CGG | - | tig0010571:46597-46616 | None:intergenic | 40.0% | |
| GAAGAGTGACGAATCTTGAA+TGG | - | tig0010571:46762-46781 | None:intergenic | 40.0% | |
| TCACTCTTCTTTGCAGATCA+CGG | + | tig0010571:46773-46792 | Msa1348840:intron | 40.0% | |
| TGAAGAAGGAAGTAGAACAC+TGG | - | tig0010571:46809-46828 | None:intergenic | 40.0% | |
| GTTCTACTTCCTTCTTCAGA+AGG | + | tig0010571:46811-46830 | Msa1348840:CDS | 40.0% | |
| ! | CTCTATTTTCTTGGCTAACC+AGG | + | tig0010571:46876-46895 | Msa1348840:CDS | 40.0% |
| !!! | TTCCTTTTTTGATGCGTTGG+TGG | + | tig0010571:47018-47037 | Msa1348840:intron | 40.0% |
| !!! | TCCTTTTTTGATGCGTTGGT+GGG | + | tig0010571:47019-47038 | Msa1348840:intron | 40.0% |
| TGCTGTTCTACAAGGTGAAA+AGG | + | tig0010571:47223-47242 | Msa1348840:CDS | 40.0% | |
| GGAAGCTGAGAAAATGATTG+TGG | + | tig0010571:47244-47263 | Msa1348840:CDS | 40.0% | |
| GCTTCTAGCATTTCTTTCCA+CGG | + | tig0010571:47283-47302 | Msa1348840:CDS | 40.0% | |
| TAGCATTTCTTTCCACGGAA+AGG | + | tig0010571:47288-47307 | Msa1348840:CDS | 40.0% | |
| ATAAGAAGTTCACCTTTCCG+TGG | - | tig0010571:47303-47322 | None:intergenic | 40.0% | |
| !! | AGACTTGCTAAGTTGTGATC+TGG | - | tig0010571:47438-47457 | None:intergenic | 40.0% |
| !! | CAGCATGCATTTGACTTGAA+CGG | + | tig0010571:47553-47572 | Msa1348840:intron | 40.0% |
| ATGCCTGTAAGTGACAATTG+CGG | + | tig0010571:47603-47622 | Msa1348840:intron | 40.0% | |
| ! | GGATTTAAAACCGCATCTGA+AGG | + | tig0010571:47634-47653 | Msa1348840:intron | 40.0% |
| TGAAGGGTCAAAAGTGAAGA+TGG | + | tig0010571:47651-47670 | Msa1348840:intron | 40.0% | |
| AAAATTAAAAGGGGAACCCC+AGG | - | tig0010571:47698-47717 | None:intergenic | 40.0% | |
| TTCCTGCACATAAAGACACA+CGG | - | tig0010571:47758-47777 | None:intergenic | 40.0% | |
| GCAGGAATTTCATCTGTCTT+TGG | + | tig0010571:47771-47790 | Msa1348840:intron | 40.0% | |
| ACAAATCCTAAAGCAAGACG+TGG | - | tig0010571:47888-47907 | None:intergenic | 40.0% | |
| ATATCACCATGCTGGTGATA+CGG | + | tig0010571:48001-48020 | Msa1348840:three_prime_UTR | 40.0% | |
| !! | TCAGCTTACGGAAAGTACCT+CGG | + | tig0010571:38201-38220 | Msa1348840:five_prime_UTR | 45.0% |
| GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
| CCTCAAACTACTTAGGGACA+TGG | - | tig0010571:38311-38330 | None:intergenic | 45.0% | |
| CCATGTCCCTAAGTAGTTTG+AGG | + | tig0010571:38308-38327 | Msa1348840:intron | 45.0% | |
| AGTGTGAACACTCCCTTTGA+GGG | + | tig0010571:38457-38476 | Msa1348840:intron | 45.0% | |
| !! | GGTAAAGAAGCGTTTAACGG+AGG | - | tig0010571:38486-38505 | None:intergenic | 45.0% |
| TATGATGGTCCTGTTATGGG+GGG | - | tig0010571:38638-38657 | None:intergenic | 45.0% | |
| CTATTAAAACCCAAGGGAGG+AGG | - | tig0010571:38765-38784 | None:intergenic | 45.0% | |
| ! | GTGCTATTAAAACCCAAGGG+AGG | - | tig0010571:38768-38787 | None:intergenic | 45.0% |
| CTTATAGGTTGTTGTCGGGT+TGG | - | tig0010571:38931-38950 | None:intergenic | 45.0% | |
| CAAGCACCTTGTCTGCTTAT+AGG | - | tig0010571:38946-38965 | None:intergenic | 45.0% | |
| TGCTTGTGCGGAAAGAGTTT+AGG | + | tig0010571:38960-38979 | Msa1348840:intron | 45.0% | |
| GCTTGTGCGGAAAGAGTTTA+GGG | + | tig0010571:38961-38980 | Msa1348840:intron | 45.0% | |
| ! | TTTAGGGCCCATGAGAAATG+TGG | + | tig0010571:38977-38996 | Msa1348840:intron | 45.0% |
| TTAGGGCCCATGAGAAATGT+GGG | + | tig0010571:38978-38997 | Msa1348840:intron | 45.0% | |
| TCATCGCCCACATTTCTCAT+GGG | - | tig0010571:38987-39006 | None:intergenic | 45.0% | |
| ATCATCGCCCACATTTCTCA+TGG | - | tig0010571:38988-39007 | None:intergenic | 45.0% | |
| ATGAGAAATGTGGGCGATGA+TGG | + | tig0010571:38987-39006 | Msa1348840:intron | 45.0% | |
| ! | ATTTGTTACGAGCCATGCCA+AGG | + | tig0010571:39128-39147 | Msa1348840:intron | 45.0% |
| CTTGCATTTCTTCCTTGGCA+TGG | - | tig0010571:39143-39162 | None:intergenic | 45.0% | |
| ! | TTTTATCGGATGTCCCCGAA+GGG | - | tig0010571:39523-39542 | None:intergenic | 45.0% |
| ! | ATTTTATCGGATGTCCCCGA+AGG | - | tig0010571:39524-39543 | None:intergenic | 45.0% |
| TCGGGGACATCCGATAAAAT+TGG | + | tig0010571:39524-39543 | Msa1348840:intron | 45.0% | |
| ! | TGAACGTAGCTCAGTTGGTA+TGG | + | tig0010571:39625-39644 | Msa1348840:intron | 45.0% |
| !!! | ACTTTTTTTTGTGGTGGCCG+GGG | + | tig0010571:39780-39799 | Msa1348840:intron | 45.0% |
| ! | CGACAAGATGAGGGCTTTTT+GGG | - | tig0010571:40201-40220 | None:intergenic | 45.0% |
| ! | TCGACAAGATGAGGGCTTTT+TGG | - | tig0010571:40202-40221 | None:intergenic | 45.0% |
| GGCATTCTTCGACAAGATGA+GGG | - | tig0010571:40210-40229 | None:intergenic | 45.0% | |
| TGGCATTCTTCGACAAGATG+AGG | - | tig0010571:40211-40230 | None:intergenic | 45.0% | |
| AATCGGAGATCGGTGGTTTA+CGG | - | tig0010571:40268-40287 | None:intergenic | 45.0% | |
| !!! | ATTTTGGAATCGGAGATCGG+TGG | - | tig0010571:40275-40294 | None:intergenic | 45.0% |
| GGAAGAGGATGAATACGTTC+CGG | - | tig0010571:40336-40355 | None:intergenic | 45.0% | |
| GTCTGATACGTCGTCGTTTA+GGG | - | tig0010571:40357-40376 | None:intergenic | 45.0% | |
| AGTCTGATACGTCGTCGTTT+AGG | - | tig0010571:40358-40377 | None:intergenic | 45.0% | |
| TTGGGATTGGGATTGGGAAA+GGG | - | tig0010571:40387-40406 | None:intergenic | 45.0% | |
| TGAGAAGAGAAGGCGAAATC+GGG | - | tig0010571:40422-40441 | None:intergenic | 45.0% | |
| CTCAAGATTCTTCCTCTCAG+TGG | + | tig0010571:40438-40457 | Msa1348840:CDS | 45.0% | |
| ATCGAAGAAAGACCACTGAG+AGG | - | tig0010571:40453-40472 | None:intergenic | 45.0% | |
| ! | ATCGTCGATTGAATTGGGGT+CGG | - | tig0010571:40477-40496 | None:intergenic | 45.0% |
| !!! | ATCGACGATTTTGGTTACGG+TGG | + | tig0010571:40488-40507 | Msa1348840:CDS | 45.0% |
| !!! | ATTTTGGTTACGGTGGTCGA+CGG | + | tig0010571:40495-40514 | Msa1348840:CDS | 45.0% |
| !!! | GATGCGTTTTTTGCCCTCTT+TGG | - | tig0010571:40524-40543 | None:intergenic | 45.0% |
| !! | GTCAACCGATTCGAATCAGA+AGG | + | tig0010571:40660-40679 | Msa1348840:CDS | 45.0% |
| ! | CTAGCCCTTCTGATTCGAAT+CGG | - | tig0010571:40668-40687 | None:intergenic | 45.0% |
| !! | TCGAATCAGAAGGGCTAGTT+TGG | + | tig0010571:40670-40689 | Msa1348840:CDS | 45.0% |
| ! | AAGCCTTCTTTGCTGTGTTG+TGG | - | tig0010571:40717-40736 | None:intergenic | 45.0% |
| AGAAGGCTTCTTCGTTCTCA+AGG | + | tig0010571:40728-40747 | Msa1348840:CDS | 45.0% | |
| GAAGGCTTCTTCGTTCTCAA+GGG | + | tig0010571:40729-40748 | Msa1348840:CDS | 45.0% | |
| AGAAGTTTCGAGCCAAGACT+TGG | - | tig0010571:41977-41996 | None:intergenic | 45.0% | |
| GCAACGTGTCAGAATAACAG+TGG | + | tig0010571:42112-42131 | Msa1348840:CDS | 45.0% | |
| AACCACTTTGGGCATAACTC+TGG | - | tig0010571:42148-42167 | None:intergenic | 45.0% | |
| ! | GAAAAACTAAGGGAGCATGG+AGG | + | tig0010571:42820-42839 | Msa1348840:CDS | 45.0% |
| !!! | ACAGGGAGAGCATTTTCTGA+TGG | + | tig0010571:42984-43003 | Msa1348840:intron | 45.0% |
| GGCACTTAAGAAGCAAGGTT+AGG | - | tig0010571:43187-43206 | None:intergenic | 45.0% | |
| CTTCAGGCACTTAAGAAGCA+AGG | - | tig0010571:43192-43211 | None:intergenic | 45.0% | |
| CTAAGCAAAGACAACCAGGT+TGG | + | tig0010571:43233-43252 | Msa1348840:intron | 45.0% | |
| GGTAAAGAAACATGCCAACC+TGG | - | tig0010571:43250-43269 | None:intergenic | 45.0% | |
| AAAGACAATGGGGTTGCCTT+AGG | - | tig0010571:43468-43487 | None:intergenic | 45.0% | |
| ! | GGCAACCCCATTGTCTTTTA+CGG | + | tig0010571:43470-43489 | Msa1348840:CDS | 45.0% |
| CAGCTCCGTAAAAGACAATG+GGG | - | tig0010571:43478-43497 | None:intergenic | 45.0% | |
| !! | AGCTTGTTATCAACGGACAC+AGG | - | tig0010571:43706-43725 | None:intergenic | 45.0% |
| CATCGCTGGCCATAAAGAAA+GGG | - | tig0010571:43735-43754 | None:intergenic | 45.0% | |
| TCATCGCTGGCCATAAAGAA+AGG | - | tig0010571:43736-43755 | None:intergenic | 45.0% | |
| ATCCAGTTCAGAATCATCGC+TGG | - | tig0010571:43749-43768 | None:intergenic | 45.0% | |
| ! | AGTGATGGCGCTTATTACTG+AGG | + | tig0010571:44005-44024 | Msa1348840:intron | 45.0% |
| TGGGAGGTGGTAATTTGGTT+AGG | + | tig0010571:44162-44181 | Msa1348840:intron | 45.0% | |
| GGGAGGTGGTAATTTGGTTA+GGG | + | tig0010571:44163-44182 | Msa1348840:intron | 45.0% | |
| GGAGGTGGTAATTTGGTTAG+GGG | + | tig0010571:44164-44183 | Msa1348840:intron | 45.0% | |
| GGAATTACAATGGTGTGGAG+AGG | + | tig0010571:44566-44585 | Msa1348840:CDS | 45.0% | |
| CCGAGCACATGTCAATAGTT+GGG | - | tig0010571:44629-44648 | None:intergenic | 45.0% | |
| CCCAACTATTGACATGTGCT+CGG | + | tig0010571:44626-44645 | Msa1348840:CDS | 45.0% | |
| ACCGAGCACATGTCAATAGT+TGG | - | tig0010571:44630-44649 | None:intergenic | 45.0% | |
| ACTATTGACATGTGCTCGGT+TGG | + | tig0010571:44630-44649 | Msa1348840:CDS | 45.0% | |
| ACTACTGCAAGAACCAGATG+TGG | - | tig0010571:44734-44753 | None:intergenic | 45.0% | |
| GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
| !! | TCAGTTTACGAGAAGTACCC+CGG | + | tig0010571:44951-44970 | Msa1348840:CDS | 45.0% |
| AAGTACCCCGGTTGTAATCT+TGG | + | tig0010571:44963-44982 | Msa1348840:CDS | 45.0% | |
| GCATTTGATGAGGATGACAG+TGG | + | tig0010571:38256-38275 | Msa1348840:intron | 45.0% | |
| ! | TCACTTTAAGGAACGTACCC+CGG | + | tig0010571:45089-45108 | Msa1348840:CDS | 45.0% |
| CATCAAATGCAAAGGGGTCT+TGG | - | tig0010571:45134-45153 | None:intergenic | 45.0% | |
| AGACCCCTTTGCATTTGATG+AGG | + | tig0010571:45134-45153 | Msa1348840:CDS | 45.0% | |
| ATGATATTGCGCCCTCTAAG+TGG | + | tig0010571:45157-45176 | Msa1348840:CDS | 45.0% | |
| TGATATTGCGCCCTCTAAGT+GGG | + | tig0010571:45158-45177 | Msa1348840:CDS | 45.0% | |
| GATAGTAGGTCCCACTTAGA+GGG | - | tig0010571:45171-45190 | None:intergenic | 45.0% | |
| CTCTAAGTGGGACCTACTAT+CGG | + | tig0010571:45170-45189 | Msa1348840:CDS | 45.0% | |
| TCTAAGTGGGACCTACTATC+GGG | + | tig0010571:45171-45190 | Msa1348840:CDS | 45.0% | |
| ATACCTTGACAGCAGTAAGG+AGG | - | tig0010571:45365-45384 | None:intergenic | 45.0% | |
| CTGCAACTACACATGAAACG+TGG | - | tig0010571:45464-45483 | None:intergenic | 45.0% | |
| CAACACCTACAAGACAACAC+AGG | - | tig0010571:45540-45559 | None:intergenic | 45.0% | |
| CAATTAATTGCTGCCCATGG+AGG | + | tig0010571:45593-45612 | Msa1348840:CDS | 45.0% | |
| ATGACGGTGAGCTGAAAGAA+GGG | - | tig0010571:45655-45674 | None:intergenic | 45.0% | |
| ! | TCTGGGCTTGCTTGTAAATC+TGG | + | tig0010571:45772-45791 | Msa1348840:CDS | 45.0% |
| TTGAGAAGGATGGTCGTAAC+AGG | + | tig0010571:45795-45814 | Msa1348840:CDS | 45.0% | |
| TGTGTGTGTGTGTGTGAGAT+AGG | + | tig0010571:45996-46015 | Msa1348840:intron | 45.0% | |
| GTGTGTGTGTGTGTGAGATA+GGG | + | tig0010571:45997-46016 | Msa1348840:intron | 45.0% | |
| GATGCAAGAATCATGCAGCT+TGG | - | tig0010571:46113-46132 | None:intergenic | 45.0% | |
| GATGTCGGTATAGCAGTAGT+GGG | - | tig0010571:46582-46601 | None:intergenic | 45.0% | |
| ACTTCCTTCTTCAGAAGGCT+TGG | + | tig0010571:46816-46835 | Msa1348840:CDS | 45.0% | |
| TCCCACCAACGCATCAAAAA+AGG | - | tig0010571:47023-47042 | None:intergenic | 45.0% | |
| GATTGTCAGCAATTGCTGCA+CGG | - | tig0010571:47413-47432 | None:intergenic | 45.0% | |
| ! | AGCAAGTCTTGTACCTGTGT+TGG | + | tig0010571:47449-47468 | Msa1348840:CDS | 45.0% |
| ACCTGTGTTGGACAGATTTG+TGG | + | tig0010571:47461-47480 | Msa1348840:CDS | 45.0% | |
| ACCACAAATCTGTCCAACAC+AGG | - | tig0010571:47465-47484 | None:intergenic | 45.0% | |
| CGTTCAAGTCAAATGCATGC+TGG | - | tig0010571:47555-47574 | None:intergenic | 45.0% | |
| TGCCTGTAAGTGACAATTGC+GGG | + | tig0010571:47604-47623 | Msa1348840:intron | 45.0% | |
| ! | CACTTTTGACCCTTCAGATG+CGG | - | tig0010571:47647-47666 | None:intergenic | 45.0% |
| AACCGTGTGTCTTTATGTGC+AGG | + | tig0010571:47753-47772 | Msa1348840:intron | 45.0% | |
| GGTTACACACAGACTATGCT+AGG | - | tig0010571:48070-48089 | None:intergenic | 45.0% | |
| !! | AATAATAAAAAATTATAACT+TGG | - | tig0010571:41633-41652 | None:intergenic | 5.0% |
| !!! | TTAAAAAGTTATTATTATTT+TGG | + | tig0010571:41665-41684 | Msa1348840:intron | 5.0% |
| !! | AAAATAAAAAACATTATTTA+AGG | - | tig0010571:43077-43096 | None:intergenic | 5.0% |
| AAGTACCTCGGTTGCGATCT+TGG | + | tig0010571:38213-38232 | Msa1348840:five_prime_UTR | 50.0% | |
| ATCTTCCAAGATCGCAACCG+AGG | - | tig0010571:38221-38240 | None:intergenic | 50.0% | |
| TGCGATCTTGGAAGATAGCC+AGG | + | tig0010571:38225-38244 | Msa1348840:five_prime_UTR | 50.0% | |
| GAGTGTGAACACTCCCTTTG+AGG | + | tig0010571:38456-38475 | Msa1348840:intron | 50.0% | |
| TAACGGAGGCAACCCTCAAA+GGG | - | tig0010571:38472-38491 | None:intergenic | 50.0% | |
| TTAACGGAGGCAACCCTCAA+AGG | - | tig0010571:38473-38492 | None:intergenic | 50.0% | |
| TATGGGGGGATAGGAACACT+TGG | - | tig0010571:38624-38643 | None:intergenic | 50.0% | |
| TGTTCCTATCCCCCCATAAC+AGG | + | tig0010571:38626-38645 | Msa1348840:intron | 50.0% | |
| !! | TCGGGTTGGGATAATGCAGT+CGG | - | tig0010571:38917-38936 | None:intergenic | 50.0% |
| ! | AAGCAGACAAGGTGCTTGTG+CGG | + | tig0010571:38948-38967 | Msa1348840:intron | 50.0% |
| CCAACTGAGCTACGTTCACA+AGG | - | tig0010571:39623-39642 | None:intergenic | 50.0% | |
| CCTTGTGAACGTAGCTCAGT+TGG | + | tig0010571:39620-39639 | Msa1348840:intron | 50.0% | |
| GCAAGGTCATATGCAAGGTC+CGG | + | tig0010571:39674-39693 | Msa1348840:intron | 50.0% | |
| CAAGGTCATATGCAAGGTCC+GGG | + | tig0010571:39675-39694 | Msa1348840:intron | 50.0% | |
| AAGGTCATATGCAAGGTCCG+GGG | + | tig0010571:39676-39695 | Msa1348840:intron | 50.0% | |
| AAGGTCATATGCAAGGTCCG+GGG | - | tig0010571:39676-39695 | None:intergenic | 50.0% | |
| CAAGGTCATATGCAAGGTCC+GGG | - | tig0010571:39675-39694 | None:intergenic | 50.0% | |
| GCAAGGTCATATGCAAGGTC+CGG | - | tig0010571:39674-39693 | None:intergenic | 50.0% | |
| GGCGGCTATGTCGATGAATT+TGG | - | tig0010571:40237-40256 | None:intergenic | 50.0% | |
| CGCCGCAAACCATCAATTTC+CGG | + | tig0010571:40314-40333 | Msa1348840:CDS | 50.0% | |
| TACGTCGTCGTTTAGGGAAG+AGG | - | tig0010571:40351-40370 | None:intergenic | 50.0% | |
| CTTGGGATTGGGATTGGGAA+AGG | - | tig0010571:40388-40407 | None:intergenic | 50.0% | |
| TGGGTCTTGGGATTGGGATT+GGG | - | tig0010571:40393-40412 | None:intergenic | 50.0% | |
| GTAGAGTGGGTCTTGGGATT+GGG | - | tig0010571:40399-40418 | None:intergenic | 50.0% | |
| GAGAAGAGAAGGCGAAATCG+GGG | - | tig0010571:40421-40440 | None:intergenic | 50.0% | |
| !! | TTTTGGTTACGGTGGTCGAC+GGG | + | tig0010571:40496-40515 | Msa1348840:CDS | 50.0% |
| !! | GCTCTTGATGGACTTCGGAA+AGG | + | tig0010571:40638-40657 | Msa1348840:CDS | 50.0% |
| GTGCCACAACACAGCAAAGA+AGG | + | tig0010571:40711-40730 | Msa1348840:CDS | 50.0% | |
| GTTGCAGCTGCAAGATTGCT+GGG | - | tig0010571:41107-41126 | None:intergenic | 50.0% | |
| GACCAGAGTTATGCCCAAAG+TGG | + | tig0010571:42143-42162 | Msa1348840:CDS | 50.0% | |
| !! | CAGAAACCTCTGGTGCTGTA+CGG | + | tig0010571:42776-42795 | Msa1348840:intron | 50.0% |
| !! | CACAGGGGTAATTTCTGGCT+TGG | + | tig0010571:43538-43557 | Msa1348840:intron | 50.0% |
| GTTATCAACGGACACAGGAG+AGG | - | tig0010571:43701-43720 | None:intergenic | 50.0% | |
| !! | AGAATGCGCCGATTGAGTGA+TGG | + | tig0010571:43990-44009 | Msa1348840:intron | 50.0% |
| !! | CCTGGAACTATTTTGGGTCG+TGG | - | tig0010571:44785-44804 | None:intergenic | 50.0% |
| CCACGACCCAAAATAGTTCC+AGG | + | tig0010571:44782-44801 | Msa1348840:CDS | 50.0% | |
| AGGTGTCCCTGTTGTAGTCT+TGG | + | tig0010571:44825-44844 | Msa1348840:CDS | 50.0% | |
| ACGTACCCCGGTTGTAATCT+TGG | + | tig0010571:45101-45120 | Msa1348840:CDS | 50.0% | |
| CGATAGTAGGTCCCACTTAG+AGG | - | tig0010571:45172-45191 | None:intergenic | 50.0% | |
| CTAAGTGGGACCTACTATCG+GGG | + | tig0010571:45172-45191 | Msa1348840:CDS | 50.0% | |
| GAGGCAATCAGTTAGAAGGC+TGG | - | tig0010571:45346-45365 | None:intergenic | 50.0% | |
| TTGCCTCCTTACTGCTGTCA+AGG | + | tig0010571:45359-45378 | Msa1348840:CDS | 50.0% | |
| ! | GATGACGGTGAGCTGAAAGA+AGG | - | tig0010571:45656-45675 | None:intergenic | 50.0% |
| GCATCTAACTGACCACGAGT+TGG | + | tig0010571:45733-45752 | Msa1348840:CDS | 50.0% | |
| ACACACACACAGAGTCACGT+AGG | - | tig0010571:45987-46006 | None:intergenic | 50.0% | |
| TCATGCAGCTTGGAGAGAGA+GGG | - | tig0010571:46103-46122 | None:intergenic | 50.0% | |
| ATCATGCAGCTTGGAGAGAG+AGG | - | tig0010571:46104-46123 | None:intergenic | 50.0% | |
| ! | ACACACAGAGACTGGTCAAG+GGG | - | tig0010571:46150-46169 | None:intergenic | 50.0% |
| ! | CACACACAGAGACTGGTCAA+GGG | - | tig0010571:46151-46170 | None:intergenic | 50.0% |
| ! | ACACACACAGAGACTGGTCA+AGG | - | tig0010571:46152-46171 | None:intergenic | 50.0% |
| ACACACACACACACAGAGAC+TGG | - | tig0010571:46158-46177 | None:intergenic | 50.0% | |
| GGATGTCGGTATAGCAGTAG+TGG | - | tig0010571:46583-46602 | None:intergenic | 50.0% | |
| ! | TGGTCCAAGCCTTCTGAAGA+AGG | - | tig0010571:46823-46842 | None:intergenic | 50.0% |
| TTCTTCAGAAGGCTTGGACC+AGG | + | tig0010571:46822-46841 | Msa1348840:CDS | 50.0% | |
| TAACCAGGGTGAAAGTGAGG+CGG | + | tig0010571:46891-46910 | Msa1348840:CDS | 50.0% | |
| GATCCTGCTGCTGTTCTACA+AGG | + | tig0010571:47215-47234 | Msa1348840:CDS | 50.0% | |
| TCACCTTGTAGAACAGCAGC+AGG | - | tig0010571:47221-47240 | None:intergenic | 50.0% | |
| ! | TGCCCGCAATTGTCACTTAC+AGG | - | tig0010571:47609-47628 | None:intergenic | 50.0% |
| GTAAGTGACAATTGCGGGCA+TGG | + | tig0010571:47609-47628 | Msa1348840:intron | 50.0% | |
| GTACAGCCACGTCTTGCTTT+AGG | + | tig0010571:47879-47898 | Msa1348840:three_prime_UTR | 50.0% | |
| TGGTCCTGTTATGGGGGGAT+AGG | - | tig0010571:38633-38652 | None:intergenic | 55.0% | |
| AAGGTCCGGGGTTCAAACTC+CGG | + | tig0010571:39688-39707 | Msa1348840:intron | 55.0% | |
| !! | TGGTTTACGGTGGTTGGTGG+CGG | - | tig0010571:40255-40274 | None:intergenic | 55.0% |
| GATCGGTGGTTTACGGTGGT+TGG | - | tig0010571:40261-40280 | None:intergenic | 55.0% | |
| GTGGGTCTTGGGATTGGGAT+TGG | - | tig0010571:40394-40413 | None:intergenic | 55.0% | |
| GGTAGAGTGGGTCTTGGGAT+TGG | - | tig0010571:40400-40419 | None:intergenic | 55.0% | |
| ATCGGGGTAGAGTGGGTCTT+GGG | - | tig0010571:40405-40424 | None:intergenic | 55.0% | |
| AATCGGGGTAGAGTGGGTCT+TGG | - | tig0010571:40406-40425 | None:intergenic | 55.0% | |
| AGGCGAAATCGGGGTAGAGT+GGG | - | tig0010571:40412-40431 | None:intergenic | 55.0% | |
| AAGGCGAAATCGGGGTAGAG+TGG | - | tig0010571:40413-40432 | None:intergenic | 55.0% | |
| ! | TTGATGGAGGCGCAGGAGTT+TGG | + | tig0010571:40581-40600 | Msa1348840:CDS | 55.0% |
| GCAGGAGTTTGGCGAGATGA+TGG | + | tig0010571:40592-40611 | Msa1348840:CDS | 55.0% | |
| GGTTGCAGCTGCAAGATTGC+TGG | - | tig0010571:41108-41127 | None:intergenic | 55.0% | |
| AGTCTTCCGTACAGCACCAG+AGG | - | tig0010571:42785-42804 | None:intergenic | 55.0% | |
| !! | TCTGGTGCTGTACGGAAGAC+TGG | + | tig0010571:42784-42803 | Msa1348840:CDS | 55.0% |
| GGCCAGCGATGATTCTGAAC+TGG | + | tig0010571:43744-43763 | Msa1348840:CDS | 55.0% | |
| !! | ACTGGGCTGGCAAGGAATAG+TGG | + | tig0010571:44142-44161 | Msa1348840:intron | 55.0% |
| !! | CTGGGCTGGCAAGGAATAGT+GGG | + | tig0010571:44143-44162 | Msa1348840:intron | 55.0% |
| ! | TGGCAAGGAATAGTGGGAGG+TGG | + | tig0010571:44149-44168 | Msa1348840:intron | 55.0% |
| CCTCGAACTACTTAGGGACG+TGG | - | tig0010571:45061-45080 | None:intergenic | 55.0% | |
| CCACGTCCCTAAGTAGTTCG+AGG | + | tig0010571:45058-45077 | Msa1348840:CDS | 55.0% | |
| AATTGCTGCCCATGGAGGGT+TGG | + | tig0010571:45598-45617 | Msa1348840:CDS | 55.0% | |
| CATAGCCTCCAACCCTCCAT+GGG | - | tig0010571:45609-45628 | None:intergenic | 55.0% | |
| ACATAGCCTCCAACCCTCCA+TGG | - | tig0010571:45610-45629 | None:intergenic | 55.0% | |
| ! | ACACAGAGACTGGTCAAGGG+GGG | - | tig0010571:46148-46167 | None:intergenic | 55.0% |
| ! | CACACAGAGACTGGTCAAGG+GGG | - | tig0010571:46149-46168 | None:intergenic | 55.0% |
| TTCAGAAGGCTTGGACCAGG+AGG | + | tig0010571:46825-46844 | Msa1348840:CDS | 55.0% | |
| AAGGCTTGGACCAGGAGGTT+CGG | + | tig0010571:46830-46849 | Msa1348840:CDS | 55.0% | |
| GGCTAACCAGGGTGAAAGTG+AGG | + | tig0010571:46888-46907 | Msa1348840:CDS | 55.0% | |
| AACCAGGGTGAAAGTGAGGC+GGG | + | tig0010571:46892-46911 | Msa1348840:CDS | 55.0% | |
| ! | TGATGCGTTGGTGGGAAGCT+TGG | + | tig0010571:47027-47046 | Msa1348840:intron | 55.0% |
| GTGGGAAGCTTGGAGTAGCA+AGG | + | tig0010571:47037-47056 | Msa1348840:intron | 55.0% | |
| AGTGACAATTGCGGGCATGG+TGG | + | tig0010571:47612-47631 | Msa1348840:intron | 55.0% | |
| GTGACAATTGCGGGCATGGT+GGG | + | tig0010571:47613-47632 | Msa1348840:intron | 55.0% | |
| GCATCTCCGTATCACCAGCA+TGG | - | tig0010571:48010-48029 | None:intergenic | 55.0% | |
| ! | GTGGGCGATGATGGCACTCA+TGG | + | tig0010571:38996-39015 | Msa1348840:intron | 60.0% |
| AAGGTCCGGGGTTCAAACCC+CGG | - | tig0010571:39800-39819 | None:intergenic | 60.0% | |
| CGGTGGTTTACGGTGGTTGG+TGG | - | tig0010571:40258-40277 | None:intergenic | 60.0% | |
| CGGAGATCGGTGGTTTACGG+TGG | - | tig0010571:40265-40284 | None:intergenic | 60.0% | |
| TGGTCGACGGGAGCCAAAGA+GGG | + | tig0010571:40508-40527 | Msa1348840:CDS | 60.0% | |
| TCCATCAACGTCGACGTCGC+CGG | - | tig0010571:40569-40588 | None:intergenic | 60.0% | |
| ! | GGTGCTGTACGGAAGACTGG+TGG | + | tig0010571:42787-42806 | Msa1348840:CDS | 60.0% |
| CTCCAGGGTGAATACTGGGC+TGG | + | tig0010571:44129-44148 | Msa1348840:intron | 60.0% | |
| TGCCAGCCCAGTATTCACCC+TGG | - | tig0010571:44134-44153 | None:intergenic | 60.0% | |
| !! | GGGTGAATACTGGGCTGGCA+AGG | + | tig0010571:44134-44153 | Msa1348840:intron | 60.0% |
| ! | GGCTGGCAAGGAATAGTGGG+AGG | + | tig0010571:44146-44165 | Msa1348840:intron | 60.0% |
| TCAAGGGGGGATTGGAGGGA+AGG | - | tig0010571:46135-46154 | None:intergenic | 60.0% | |
| CTGGTCAAGGGGGGATTGGA+GGG | - | tig0010571:46139-46158 | None:intergenic | 60.0% | |
| ACTGGTCAAGGGGGGATTGG+AGG | - | tig0010571:46140-46159 | None:intergenic | 60.0% | |
| ! | GAGACTGGTCAAGGGGGGAT+TGG | - | tig0010571:46143-46162 | None:intergenic | 60.0% |
| TAACATCCCGCCGAACCTCC+TGG | - | tig0010571:46843-46862 | None:intergenic | 60.0% | |
| GTGAAAGTGAGGCGGGAGCT+GGG | + | tig0010571:46899-46918 | Msa1348840:CDS | 60.0% | |
| TGAAAGTGAGGCGGGAGCTG+GGG | + | tig0010571:46900-46919 | Msa1348840:CDS | 60.0% | |
| GGTGGCCGGAGTTTGAACCC+CGG | - | tig0010571:39696-39715 | None:intergenic | 65.0% | |
| GTGGTCGACGGGAGCCAAAG+AGG | + | tig0010571:40507-40526 | Msa1348840:CDS | 65.0% | |
| TCCGGCGACGTCGACGTTGA+TGG | + | tig0010571:40565-40584 | Msa1348840:CDS | 65.0% | |
| ! | GGCGACGTCGACGTTGATGG+AGG | + | tig0010571:40568-40587 | Msa1348840:CDS | 65.0% |
| ! | GTCGACGTTGATGGAGGCGC+AGG | + | tig0010571:40574-40593 | Msa1348840:CDS | 65.0% |
| TGCTGCCCATGGAGGGTTGG+AGG | + | tig0010571:45601-45620 | Msa1348840:CDS | 65.0% | |
| GCTTGGACCAGGAGGTTCGG+CGG | + | tig0010571:46833-46852 | Msa1348840:CDS | 65.0% | |
| CTTGGACCAGGAGGTTCGGC+GGG | + | tig0010571:46834-46853 | Msa1348840:CDS | 65.0% | |
| CTCCCGCCTCACTTTCACCC+TGG | - | tig0010571:46897-46916 | None:intergenic | 65.0% | |
| GGTGAAAGTGAGGCGGGAGC+TGG | + | tig0010571:46898-46917 | Msa1348840:CDS | 65.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | tig0010571:39792-39811 | Msa1348840:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0010571 | gene | 38190 | 48189 | 38190 | ID=Msa1348840;Name=Msa1348840 |
| tig0010571 | mRNA | 38190 | 48189 | 38190 | ID=Msa1348840-mRNA-1;Parent=Msa1348840;Name=Msa1348840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=329|1|1|1|0.92|0.85|14|331|956 |
| tig0010571 | exon | 38190 | 38252 | 38190 | ID=Msa1348840-mRNA-1:exon:6597;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 40027 | 40750 | 40027 | ID=Msa1348840-mRNA-1:exon:6598;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 41052 | 41151 | 41052 | ID=Msa1348840-mRNA-1:exon:6599;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 41878 | 42217 | 41878 | ID=Msa1348840-mRNA-1:exon:6600;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 42779 | 42891 | 42779 | ID=Msa1348840-mRNA-1:exon:6601;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 43122 | 43250 | 43122 | ID=Msa1348840-mRNA-1:exon:6602;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 43432 | 43525 | 43432 | ID=Msa1348840-mRNA-1:exon:6603;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 43677 | 43787 | 43677 | ID=Msa1348840-mRNA-1:exon:6604;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 44536 | 45380 | 44536 | ID=Msa1348840-mRNA-1:exon:6605;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 45554 | 45816 | 45554 | ID=Msa1348840-mRNA-1:exon:6606;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 46789 | 46942 | 46789 | ID=Msa1348840-mRNA-1:exon:6607;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 47212 | 47309 | 47212 | ID=Msa1348840-mRNA-1:exon:6608;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 47401 | 47482 | 47401 | ID=Msa1348840-mRNA-1:exon:6609;Parent=Msa1348840-mRNA-1 |
| tig0010571 | exon | 47775 | 48189 | 47775 | ID=Msa1348840-mRNA-1:exon:6610;Parent=Msa1348840-mRNA-1 |
| tig0010571 | five_prime_UTR | 38190 | 38252 | 38190 | ID=Msa1348840-mRNA-1:five_prime_utr;Parent=Msa1348840-mRNA-1 |
| tig0010571 | five_prime_UTR | 40027 | 40292 | 40027 | ID=Msa1348840-mRNA-1:five_prime_utr;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 40293 | 40750 | 40293 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 41052 | 41151 | 41052 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 41878 | 42217 | 41878 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 42779 | 42891 | 42779 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 43122 | 43250 | 43122 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 43432 | 43525 | 43432 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 43677 | 43787 | 43677 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 44536 | 45380 | 44536 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 45554 | 45816 | 45554 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 46789 | 46942 | 46789 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 47212 | 47309 | 47212 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 47401 | 47482 | 47401 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | CDS | 47775 | 47858 | 47775 | ID=Msa1348840-mRNA-1:cds;Parent=Msa1348840-mRNA-1 |
| tig0010571 | three_prime_UTR | 47859 | 48189 | 47859 | ID=Msa1348840-mRNA-1:three_prime_utr;Parent=Msa1348840-mRNA-1 |
| Gene Sequence |
| Protein sequence |