AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1349240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349240 MtrunA17_Chr1g0199671 98.792 331 4 0 1 331 1 331 0.0 671
Msa1349240 MtrunA17_Chr1g0213161 56.202 258 77 10 74 329 10 233 2.22e-75 231
Msa1349240 MtrunA17_Chr2g0326771 46.774 186 70 6 121 306 124 280 9.79e-44 152
Msa1349240 MtrunA17_Chr1g0146231 34.783 322 133 11 9 306 30 298 2.73e-38 139
Msa1349240 MtrunA17_Chr3g0140331 34.228 298 134 8 17 306 74 317 1.54e-36 135
Msa1349240 MtrunA17_Chr4g0028961 64.894 94 28 1 238 331 228 316 8.43e-36 132
Msa1349240 MtrunA17_Chr4g0035891 57.692 104 33 2 203 306 183 275 2.68e-35 130
Msa1349240 MtrunA17_Chr6g0461591 35.798 257 124 7 67 306 24 256 6.03e-34 125
Msa1349240 MtrunA17_Chr7g0253101 35.547 256 130 6 58 306 25 252 6.90e-34 125
Msa1349240 MtrunA17_Chr3g0145121 73.611 72 19 0 235 306 208 279 1.54e-33 125
Msa1349240 MtrunA17_Chr5g0404981 34.892 278 118 11 48 308 135 366 1.62e-33 127
Msa1349240 MtrunA17_Chr8g0340401 81.538 65 12 0 242 306 226 290 6.70e-33 124
Msa1349240 MtrunA17_Chr5g0395391 54.808 104 47 0 203 306 231 334 7.93e-32 122
Msa1349240 MtrunA17_Chr5g0395391 55.000 100 43 2 207 305 133 231 1.38e-28 113
Msa1349240 MtrunA17_Chr8g0372291 61.290 93 27 2 216 308 201 284 8.55e-32 120
Msa1349240 MtrunA17_Chr1g0169431 80.000 65 13 0 242 306 172 236 1.45e-31 118
Msa1349240 MtrunA17_Chr7g0232671 61.290 62 24 0 242 303 187 248 1.17e-20 89.7
Msa1349240 MtrunA17_Chr7g0232701 58.065 62 26 0 242 303 73 134 1.94e-19 83.2
Msa1349240 MtrunA17_Chr7g0232681 56.452 62 27 0 242 303 132 193 6.76e-19 83.6
Msa1349240 MtrunA17_Chr7g0267351 55.844 77 33 1 177 253 36 111 5.69e-17 75.9
Msa1349240 MtrunA17_Chr5g0404131 54.167 48 22 0 227 274 177 224 2.03e-12 67.0
Msa1349240 MtrunA17_Chr8g0373231 66.667 36 12 0 239 274 122 157 3.84e-11 62.4
Msa1349240 MtrunA17_Chr7g0271861 67.647 34 11 0 244 277 24 57 8.37e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1349240 AT1G08010.2 40.598 234 109 5 85 316 89 294 4.52e-43 150
Msa1349240 AT1G08010.1 40.598 234 109 5 85 316 89 294 4.52e-43 150
Msa1349240 AT1G08010.3 40.598 234 109 5 85 316 89 294 4.52e-43 150
Msa1349240 AT3G54810.1 71.579 95 20 2 241 328 228 322 2.61e-41 147
Msa1349240 AT3G54810.2 71.579 95 20 2 241 328 228 322 2.61e-41 147
Msa1349240 AT1G08000.2 42.051 195 88 3 115 309 116 285 4.77e-38 137
Msa1349240 AT1G08000.1 42.051 195 88 3 115 309 116 285 4.77e-38 137
Msa1349240 AT5G25830.1 40.249 241 113 8 67 306 73 283 8.12e-38 137
Msa1349240 AT4G32890.1 34.641 306 120 12 17 306 20 261 6.70e-37 135
Msa1349240 AT5G66320.2 38.258 264 124 9 55 315 95 322 7.47e-35 130
Msa1349240 AT5G66320.1 38.258 264 124 9 55 315 95 322 7.47e-35 130
Msa1349240 AT4G36240.1 55.556 99 42 1 208 306 132 228 3.32e-32 120
Msa1349240 AT3G24050.1 75.000 68 17 0 239 306 191 258 4.84e-32 121
Msa1349240 AT3G51080.1 71.053 76 21 1 242 317 221 295 1.10e-31 121
Msa1349240 AT3G60530.1 74.242 66 17 0 241 306 157 222 9.39e-31 117
Msa1349240 AT2G28340.1 65.333 75 26 0 244 318 193 267 1.25e-30 117
Msa1349240 AT2G45050.1 72.727 66 18 0 241 306 178 243 3.25e-30 115
Msa1349240 AT4G34680.1 60.759 79 31 0 239 317 177 255 5.10e-29 113
Msa1349240 AT4G34680.2 60.759 79 31 0 239 317 177 255 5.10e-29 113
Msa1349240 AT3G45170.1 40.000 140 79 3 168 306 44 179 3.72e-28 108
Msa1349240 AT4G36620.1 62.162 37 14 0 238 274 71 107 1.81e-11 63.2
Msa1349240 AT3G50870.1 64.865 37 13 0 238 274 148 184 3.33e-11 63.5
Msa1349240 AT5G26930.1 54.545 44 18 1 234 277 20 61 4.69e-11 60.1

Find 125 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAGGTGAAATTGAAATTA+AGG 0.183082 tig0010682:-81882 None:intergenic
CTAGCAGCAGGCCGGTATTC+GGG 0.281895 tig0010682:-85338 None:intergenic
ACAACTCGTTGGCGAGTATC+TGG 0.294745 tig0010682:+83101 Msa1349240:CDS
AAATGAATCGTCCACAATAT+TGG 0.301923 tig0010682:-84745 None:intergenic
AATAAACTAAGCTTAGTTTC+AGG 0.316869 tig0010682:+81904 Msa1349240:five_prime_UTR
GTTCGAAGATCTTCTTTCAT+TGG 0.321117 tig0010682:+84713 Msa1349240:intron
CTGCTTTCAAGGACAGAAAT+AGG 0.322926 tig0010682:-84864 None:intergenic
TTGACTTGCAGAGAAGAAAA+TGG 0.332195 tig0010682:+82964 Msa1349240:intron
AGAATGGTTCACTACTTGTT+AGG 0.338570 tig0010682:+85204 Msa1349240:CDS
GTCTCTCCAGAAGAGAGCTT+TGG 0.342561 tig0010682:-85122 None:intergenic
ACAGAAGGAAAGGGAAGAAA+AGG 0.361946 tig0010682:+85626 Msa1349240:three_prime_UTR
CGTCCGCAAGGCACCGGAAT+GGG 0.362306 tig0010682:-84927 None:intergenic
ACTAGCAGCAGGCCGGTATT+CGG 0.363594 tig0010682:-85339 None:intergenic
TCTCTACTCACCGGATCAAC+GGG 0.368770 tig0010682:-83184 None:intergenic
GAAGAAAAGGGTAGGATCTT+AGG 0.378964 tig0010682:+85639 Msa1349240:three_prime_UTR
GGCTGTGGGGCGTGGACGCT+TGG 0.384746 tig0010682:-84958 None:intergenic
AAGGCGAGAACATTGGTGTT+TGG 0.385415 tig0010682:-85458 None:intergenic
TATCCTTGCATCTCATTTCA+AGG 0.385918 tig0010682:-85406 None:intergenic
CAATGGAGGGCAGGTCCAAT+GGG 0.390212 tig0010682:+85260 Msa1349240:CDS
AATACAACATTTGAACTAGT+TGG 0.392753 tig0010682:+85483 Msa1349240:exon
AGCAGGAACTACTGCTTTCA+AGG 0.398558 tig0010682:-84875 None:intergenic
GCACTCCAATTCGCACAAAA+AGG 0.399415 tig0010682:+85382 Msa1349240:CDS
AACTAAGCTTAGTTTATTTG+AGG 0.403480 tig0010682:-81899 None:intergenic
ACAATGGAGGGCAGGTCCAA+TGG 0.404651 tig0010682:+85259 Msa1349240:CDS
TTGGTTTCTTGACAATAATC+CGG 0.416836 tig0010682:-85103 None:intergenic
GGGTTGAAGGCTGTGGGGCG+TGG 0.418136 tig0010682:-84966 None:intergenic
TGCCCTCCATTGTGGAGTCT+TGG 0.422561 tig0010682:-85249 None:intergenic
AAGAAACCAAAGCTCTCTTC+TGG 0.429167 tig0010682:+85116 Msa1349240:CDS
TGAGAAGAGAATGGTAGAAA+AGG 0.440839 tig0010682:-81850 None:intergenic
CCCTACTTCCTCTTCTGTTG+AGG 0.447338 tig0010682:+85013 Msa1349240:CDS
TTCTGTTCGCCACTGTCAGC+TGG 0.447903 tig0010682:-85185 None:intergenic
GCTGTCAGCAAGGAGGACTC+TGG 0.452116 tig0010682:+84816 Msa1349240:CDS
ATCTGAAGAAAGCGCCTTGG+TGG 0.456913 tig0010682:-85060 None:intergenic
TGCGAATTGGAGTGCACAGC+TGG 0.458877 tig0010682:-85374 None:intergenic
TTGTTTCATTTCAATCACTC+TGG 0.458923 tig0010682:+85818 Msa1349240:three_prime_UTR
AGGGCTGGAATGGGGAGAAT+AGG 0.459690 tig0010682:+85594 Msa1349240:three_prime_UTR
ATTAATAGAACAGAAGGAAA+GGG 0.461623 tig0010682:+85617 Msa1349240:three_prime_UTR
GGCGGAGCTCCCCGTTGATC+CGG 0.465097 tig0010682:+83174 Msa1349240:CDS
TGGTTTCTTGACAATAATCC+GGG 0.466726 tig0010682:-85102 None:intergenic
CAGAAGGAAAGGGAAGAAAA+GGG 0.470054 tig0010682:+85627 Msa1349240:three_prime_UTR
TGCTCTGGTGGAAAGACCAC+AGG 0.471537 tig0010682:+84894 Msa1349240:CDS
TGCGGTGTACGCTACAAGTC+GGG 0.473402 tig0010682:+85305 Msa1349240:CDS
GCGGTGTCAACGTCGTCGAC+GGG 0.476293 tig0010682:-83046 None:intergenic
AGCGGTGTCAACGTCGTCGA+CGG 0.482359 tig0010682:-83047 None:intergenic
GTTGTAGTTTGCCGCGGAGG+AGG 0.484221 tig0010682:-83083 None:intergenic
GCCGACTATTCCCCGAATAC+CGG 0.484840 tig0010682:+85327 Msa1349240:CDS
CTCTCTACTCACCGGATCAA+CGG 0.485631 tig0010682:-83185 None:intergenic
AGATCTTCTTTCATTGGAGT+GGG 0.485791 tig0010682:+84719 Msa1349240:CDS
AAGATCTTCTTTCATTGGAG+TGG 0.486353 tig0010682:+84718 Msa1349240:CDS
CCTCAACAGAAGAGGAAGTA+GGG 0.487341 tig0010682:-85013 None:intergenic
AATAGGATTAATAGAACAGA+AGG 0.488681 tig0010682:+85611 Msa1349240:three_prime_UTR
AGAACGAGGGTTGAAGGCTG+TGG 0.494477 tig0010682:-84973 None:intergenic
AAACACCAATGTTCTCGCCT+TGG 0.495323 tig0010682:+85460 Msa1349240:CDS
CATAGCAGAACGAGGGTTGA+AGG 0.496157 tig0010682:-84979 None:intergenic
CGTGCACGTCCGCAAGGCAC+CGG 0.497396 tig0010682:-84933 None:intergenic
AGGGATTTACGTCCCCATTC+CGG 0.508516 tig0010682:+84914 Msa1349240:CDS
GCCTTGGTGGAGATAACATT+AGG 0.511767 tig0010682:-85047 None:intergenic
GAAAGCAGTAGTTCCTGCTC+TGG 0.513297 tig0010682:+84879 Msa1349240:CDS
TGTGGTCTTTCCACCAGAGC+AGG 0.513350 tig0010682:-84892 None:intergenic
GATTAATAGAACAGAAGGAA+AGG 0.514944 tig0010682:+85616 Msa1349240:three_prime_UTR
GAACGAGGGTTGAAGGCTGT+GGG 0.515671 tig0010682:-84972 None:intergenic
TTTAGATCACTTAGGTCGGT+AGG 0.519782 tig0010682:+85671 Msa1349240:three_prime_UTR
AAAGAGTAGTGAGAAGAGAA+TGG 0.524359 tig0010682:-81859 None:intergenic
ATTGGACCTGCCCTCCATTG+TGG 0.524395 tig0010682:-85257 None:intergenic
AGTTCAAATGTTGTATTCCA+AGG 0.525091 tig0010682:-85477 None:intergenic
GGAGGGCAATGAAGCGGCAG+CGG 0.526729 tig0010682:-83065 None:intergenic
GCCGGTATTCGGGGAATAGT+CGG 0.526797 tig0010682:-85328 None:intergenic
CGCGGAGGAGGGCAATGAAG+CGG 0.533925 tig0010682:-83071 None:intergenic
TCAAGGACAGAAATAGGACT+TGG 0.539012 tig0010682:-84858 None:intergenic
CTTGCAGAGAAGAAAATGGC+TGG 0.540090 tig0010682:+82968 Msa1349240:intron
GTCCGCAAGGCACCGGAATG+GGG 0.540180 tig0010682:-84926 None:intergenic
TTGCTGACAGCTGATGATGA+TGG 0.540546 tig0010682:-84804 None:intergenic
CTGTCAGCAAGGAGGACTCT+GGG 0.542617 tig0010682:+84817 Msa1349240:CDS
AGCAGTAGTTCCTGCTCTGG+TGG 0.543729 tig0010682:+84882 Msa1349240:CDS
TTGTAGTTTGCCGCGGAGGA+GGG 0.553031 tig0010682:-83082 None:intergenic
CAATAGTACTTCAGACCTCT+CGG 0.555740 tig0010682:+83153 Msa1349240:CDS
TTGGTGCGTGCACGTCCGCA+AGG 0.556777 tig0010682:-84939 None:intergenic
TAGCAGCAGGCCGGTATTCG+GGG 0.557503 tig0010682:-85337 None:intergenic
CATGTTCTCCTCAACAGAAG+AGG 0.558411 tig0010682:-85021 None:intergenic
ACGTCCGCAAGGCACCGGAA+TGG 0.559647 tig0010682:-84928 None:intergenic
TTTATAATATCCATATCCAT+GGG 0.561480 tig0010682:+85722 Msa1349240:three_prime_UTR
AAAATCTGAAGAAAGCGCCT+TGG 0.566825 tig0010682:-85063 None:intergenic
CGAGTTGTAGTTTGCCGCGG+AGG 0.567794 tig0010682:-83086 None:intergenic
TCAGCTGGAGCAGTAGGAAG+TGG 0.567950 tig0010682:-85170 None:intergenic
CCACTGTCAGCTGGAGCAGT+AGG 0.567950 tig0010682:-85176 None:intergenic
GGAGAGTCTCACAATGAAAG+TGG 0.570456 tig0010682:+84773 Msa1349240:CDS
ATACGACGCGACTCTAGATA+AGG 0.574384 tig0010682:-85523 None:intergenic
AACACCGAGTCAGACTCATT+CGG 0.575075 tig0010682:-83124 None:intergenic
TCCTCAACAGAAGAGGAAGT+AGG 0.578279 tig0010682:-85014 None:intergenic
CGCGGCAAACTACAACTCGT+TGG 0.579753 tig0010682:+83090 Msa1349240:CDS
AACCAAGACTCCACAATGGA+GGG 0.579995 tig0010682:+85247 Msa1349240:CDS
AAGACTCCACAATGGAGGGC+AGG 0.580027 tig0010682:+85251 Msa1349240:CDS
CAAAACGTTGGACTAGCAGC+AGG 0.583276 tig0010682:-85350 None:intergenic
GTCCCCATTCCGGTGCCTTG+CGG 0.585255 tig0010682:+84924 Msa1349240:CDS
GCTGACAGTGGCGAACAGAA+TGG 0.590330 tig0010682:+85188 Msa1349240:CDS
TTGCGGTGTACGCTACAAGT+CGG 0.591752 tig0010682:+85304 Msa1349240:CDS
GTATTCCAAGGCGAGAACAT+TGG 0.594504 tig0010682:-85465 None:intergenic
AAAACACTCTGCAATGCTTG+CGG 0.597816 tig0010682:+85287 Msa1349240:CDS
CTGGCCGAATGAGTCTGACT+CGG 0.600304 tig0010682:+83120 Msa1349240:CDS
ATCATCATCAGCTGTCAGCA+AGG 0.601103 tig0010682:+84806 Msa1349240:CDS
CGCTTCATTGCCCTCCTCCG+CGG 0.601691 tig0010682:+83072 Msa1349240:CDS
CAACGAGTTGTAGTTTGCCG+CGG 0.602863 tig0010682:-83089 None:intergenic
TGCACAGCTGGACAAAACGT+TGG 0.609672 tig0010682:-85362 None:intergenic
GGTCCTTGAAATGAGATGCA+AGG 0.611789 tig0010682:+85403 Msa1349240:CDS
AGGAAAGGGAAGAAAAGGGT+AGG 0.615212 tig0010682:+85631 Msa1349240:three_prime_UTR
ACGTTGGACTAGCAGCAGGC+CGG 0.619617 tig0010682:-85346 None:intergenic
CTCAACAGAAGAGGAAGTAG+GGG 0.627104 tig0010682:-85012 None:intergenic
TAACCAAGACTCCACAATGG+AGG 0.629519 tig0010682:+85246 Msa1349240:CDS
CGGTGTCAACGTCGTCGACG+GGG 0.629631 tig0010682:-83045 None:intergenic
GCCTAATGTTATCTCCACCA+AGG 0.643801 tig0010682:+85046 Msa1349240:CDS
TAATTTACTCAAATTCAACA+AGG 0.648312 tig0010682:+82182 Msa1349240:five_prime_UTR
GCTCTGGTGGAAAGACCACA+GGG 0.652323 tig0010682:+84895 Msa1349240:CDS
ATGAGTTGCATAGCAGAACG+AGG 0.660947 tig0010682:-84987 None:intergenic
AACGAGGGTTGAAGGCTGTG+GGG 0.663882 tig0010682:-84971 None:intergenic
ACGCGACTCTAGATAAGGCG+AGG 0.670462 tig0010682:-85518 None:intergenic
AATGGAGGGCAGGTCCAATG+GGG 0.678887 tig0010682:+85261 Msa1349240:CDS
CAACGGGGAGCTCCGCCGAG+AGG 0.679446 tig0010682:-83168 None:intergenic
CCTACTGCTCCAGCTGACAG+TGG 0.685510 tig0010682:+85176 Msa1349240:CDS
ATCATCAGCTGTCAGCAAGG+AGG 0.691864 tig0010682:+84809 Msa1349240:CDS
GGAGTGGGTGTCCAATATTG+TGG 0.693703 tig0010682:+84734 Msa1349240:CDS
TGAGTTGCATAGCAGAACGA+GGG 0.714987 tig0010682:-84986 None:intergenic
AGATAACCAAGACTCCACAA+TGG 0.734467 tig0010682:+85243 Msa1349240:CDS
CTCTACTCACCGGATCAACG+GGG 0.746525 tig0010682:-83183 None:intergenic
AATGGGGACGTAAATCCCTG+TGG 0.749532 tig0010682:-84910 None:intergenic
TAGTACTTCAGACCTCTCGG+CGG 0.759629 tig0010682:+83156 Msa1349240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATAAACAATTTTGATTT+TGG + tig0010682:82074-82093 Msa1349240:intron 10.0%
!! AATAAAAAAATTAAGCAAAA+TGG - tig0010682:82117-82136 None:intergenic 10.0%
!!! TTTTTTTATTTTTATTATGC+AGG + tig0010682:82127-82146 Msa1349240:intron 10.0%
!! CTAATATGAAATAAATAAAT+TGG + tig0010682:82470-82489 Msa1349240:intron 10.0%
!!! ATTTTTTTTTTATCTAAAGA+AGG + tig0010682:82757-82776 Msa1349240:intron 10.0%
!!! AACTTTACTTTATTTATTTT+TGG - tig0010682:83871-83890 None:intergenic 10.0%
!!! AATATAAAGTATTTATAGAA+AGG + tig0010682:83997-84016 Msa1349240:intron 10.0%
!!! ATATAAAGTATTTATAGAAA+GGG + tig0010682:83998-84017 Msa1349240:intron 10.0%
!! AAATAAAATAAAACAAACAT+GGG - tig0010682:84237-84256 None:intergenic 10.0%
!! AAAATAAAATAAAACAAACA+TGG - tig0010682:84238-84257 None:intergenic 10.0%
!!! CAATTTGATTCTAAAATAAA+TGG + tig0010682:82322-82341 Msa1349240:intron 15.0%
!! TTGTTTCAAAAGAAAAATAT+TGG + tig0010682:82500-82519 Msa1349240:intron 15.0%
!! TGTTTCAAAAGAAAAATATT+GGG + tig0010682:82501-82520 Msa1349240:intron 15.0%
!!! AAGTCATTTTAATATCTATT+TGG + tig0010682:82627-82646 Msa1349240:intron 15.0%
!! AGAAAAAACGAAATTAAATA+GGG - tig0010682:82821-82840 None:intergenic 15.0%
!! AAGAAAAAACGAAATTAAAT+AGG - tig0010682:82822-82841 None:intergenic 15.0%
!! GAAAAAAATTATTTCGTAAT+AGG + tig0010682:83268-83287 Msa1349240:intron 15.0%
!!! TATAAGTTAGTAAAATCTTT+TGG - tig0010682:83566-83585 None:intergenic 15.0%
!!! ATAATAAAGTTTTTTTATCG+AGG + tig0010682:83583-83602 Msa1349240:intron 15.0%
!! CTCTACAAAAAAAAATAATA+TGG - tig0010682:83636-83655 None:intergenic 15.0%
!! TAAAAATTAACCTAAAAAAG+TGG - tig0010682:83774-83793 None:intergenic 15.0%
!!! AAGAGTAATATACTTTTTTT+TGG + tig0010682:84309-84328 Msa1349240:intron 15.0%
!!! TTGTTGAATTTTATTTCTTT+TGG + tig0010682:85555-85574 Msa1349240:three_prime_UTR 15.0%
!! TAATTTACTCAAATTCAACA+AGG + tig0010682:82182-82201 Msa1349240:five_prime_UTR 20.0%
!! ATTGAGATAAAATTGAAGAA+GGG - tig0010682:82215-82234 None:intergenic 20.0%
!! AATTGAGATAAAATTGAAGA+AGG - tig0010682:82216-82235 None:intergenic 20.0%
!!! TGCTTACATTTTATTTTAGA+CGG + tig0010682:82424-82443 Msa1349240:intron 20.0%
!! AGATATTAAAATGACTTGAT+TGG - tig0010682:82624-82643 None:intergenic 20.0%
!!! TGGTTTTTCTTTTTTGATAA+AGG + tig0010682:83400-83419 Msa1349240:intron 20.0%
!!! GTCGAAAAATGATTTTTTTA+AGG + tig0010682:83683-83702 Msa1349240:intron 20.0%
!!! TAAAGGAATTTTCTACTTTT+TGG - tig0010682:83924-83943 None:intergenic 20.0%
!! ATTATTTGGATCATCATTAT+TGG + tig0010682:84116-84135 Msa1349240:intron 20.0%
!! TGAAGGTTCATTATTTATTT+AGG - tig0010682:84188-84207 None:intergenic 20.0%
!! TAAATAATGAACCTTCAAAT+TGG + tig0010682:84191-84210 Msa1349240:intron 20.0%
!!! ATTTTATTTCTTTTGGTCAT+TGG + tig0010682:85562-85581 Msa1349240:three_prime_UTR 20.0%
!!! TTTTATAATATCCATATCCA+TGG + tig0010682:85721-85740 Msa1349240:three_prime_UTR 20.0%
!! TTTATAATATCCATATCCAT+GGG + tig0010682:85722-85741 Msa1349240:three_prime_UTR 20.0%
! AAGAAGGTTTAAATGGTAAA+GGG - tig0010682:81761-81780 None:intergenic 25.0%
! TTGAGGTGAAATTGAAATTA+AGG - tig0010682:81885-81904 None:intergenic 25.0%
! AACTAAGCTTAGTTTATTTG+AGG - tig0010682:81902-81921 None:intergenic 25.0%
! AATAAACTAAGCTTAGTTTC+AGG + tig0010682:81904-81923 Msa1349240:five_prime_UTR 25.0%
!! GTTCTTTTCATTTTCTCATT+TGG + tig0010682:81931-81950 Msa1349240:intron 25.0%
!!! ATTCTCTAGTTTGTTTTCTT+AGG + tig0010682:81961-81980 Msa1349240:intron 25.0%
! AGTAAAATGAAAGAAAGCAA+GGG - tig0010682:82053-82072 None:intergenic 25.0%
!!! TTATCTCAATTTTCAAGTGT+TGG + tig0010682:82225-82244 Msa1349240:intron 25.0%
!!! TTTTCCTTTCTGAAGAAATA+CGG + tig0010682:82265-82284 Msa1349240:intron 25.0%
!! TCTAAAATAAATGGAGAAAC+TGG + tig0010682:82331-82350 Msa1349240:intron 25.0%
!!! TTACATTTTATTTTAGACGG+AGG + tig0010682:82427-82446 Msa1349240:intron 25.0%
! ATTTCCGTAAAAAATTACGT+GGG + tig0010682:82853-82872 Msa1349240:intron 25.0%
!!! GAATTGCTTTGTTTTTATAG+AGG - tig0010682:82903-82922 None:intergenic 25.0%
! AATCACGATAAGTCAATAAA+AGG - tig0010682:83478-83497 None:intergenic 25.0%
!!! AATCATTTTTCGACATGAAT+TGG - tig0010682:83677-83696 None:intergenic 25.0%
! GAAAATTCCTTTACTTGAAT+TGG + tig0010682:83931-83950 Msa1349240:intron 25.0%
! TATTTATAGAAAGGGTAGTT+TGG + tig0010682:84006-84025 Msa1349240:intron 25.0%
! GGTTCATTATTTATTTAGGT+GGG - tig0010682:84184-84203 None:intergenic 25.0%
! AGGTTCATTATTTATTTAGG+TGG - tig0010682:84185-84204 None:intergenic 25.0%
! ATTAAAATGTCATTCACATG+TGG - tig0010682:84376-84395 None:intergenic 25.0%
! AAAAACAAAACATGTGTGTA+TGG - tig0010682:84451-84470 None:intergenic 25.0%
!!! CATGATACTTATTGATTCAA+TGG - tig0010682:84476-84495 None:intergenic 25.0%
! TGATCAATAAATTGCATCAT+TGG - tig0010682:84513-84532 None:intergenic 25.0%
! GCAATTTATTGATCAAATTG+TGG + tig0010682:84518-84537 Msa1349240:intron 25.0%
! TCTTCATCTATTATTCTTAG+AGG - tig0010682:84598-84617 None:intergenic 25.0%
! TCGAACTGTAATAATATAAC+AGG - tig0010682:84699-84718 None:intergenic 25.0%
!! CTTGATTTTCTTTTTCTTCT+TGG - tig0010682:85147-85166 None:intergenic 25.0%
! CAAGAAGAAAAAGAAAATCA+AGG + tig0010682:85145-85164 Msa1349240:CDS 25.0%
! AATACAACATTTGAACTAGT+TGG + tig0010682:85483-85502 Msa1349240:exon 25.0%
! AATAGGATTAATAGAACAGA+AGG + tig0010682:85611-85630 Msa1349240:three_prime_UTR 25.0%
! ATTAATAGAACAGAAGGAAA+GGG + tig0010682:85617-85636 Msa1349240:three_prime_UTR 25.0%
!!! CTAGTTATTTTAGATCACTT+AGG + tig0010682:85663-85682 Msa1349240:three_prime_UTR 25.0%
!!! TTATTTTAGATCACTTAGGT+CGG + tig0010682:85667-85686 Msa1349240:three_prime_UTR 25.0%
AGAAGGTTTAAATGGTAAAG+GGG - tig0010682:81760-81779 None:intergenic 30.0%
GAAGAAGGTTTAAATGGTAA+AGG - tig0010682:81762-81781 None:intergenic 30.0%
AGTTATTTGAAAGAGGAAAG+AGG - tig0010682:81790-81809 None:intergenic 30.0%
GAGTAAAATGAAAGAAAGCA+AGG - tig0010682:82054-82073 None:intergenic 30.0%
CTTCAGAAAGGAAAATTGAA+TGG - tig0010682:82260-82279 None:intergenic 30.0%
!! TATCATAAGTTGATGTAGCT+AGG - tig0010682:82386-82405 None:intergenic 30.0%
CATTTCCGTAAAAAATTACG+TGG + tig0010682:82852-82871 Msa1349240:intron 30.0%
TTTCCGTAAAAAATTACGTG+GGG + tig0010682:82854-82873 Msa1349240:intron 30.0%
!!! TTGCATATTGCCACTTTTTT+AGG + tig0010682:83761-83780 Msa1349240:intron 30.0%
!!! TTATTTTTGGTCAAGTAGAG+TGG - tig0010682:83858-83877 None:intergenic 30.0%
ATGACTTCCAATTCAAGTAA+AGG - tig0010682:83941-83960 None:intergenic 30.0%
ATAATGAACCTTCAAATTGG+TGG + tig0010682:84194-84213 Msa1349240:intron 30.0%
TAAAACAAACATGGGTTTAC+TGG - tig0010682:84229-84248 None:intergenic 30.0%
AAGAATAAGAACTTGTGCTT+TGG - tig0010682:84278-84297 None:intergenic 30.0%
!!! ATTCTTAGAGGCTAGTTTTA+TGG - tig0010682:84586-84605 None:intergenic 30.0%
AAATGAATCGTCCACAATAT+TGG - tig0010682:84748-84767 None:intergenic 30.0%
TTGGTTTCTTGACAATAATC+CGG - tig0010682:85106-85125 None:intergenic 30.0%
AGTTCAAATGTTGTATTCCA+AGG - tig0010682:85480-85499 None:intergenic 30.0%
GATTAATAGAACAGAAGGAA+AGG + tig0010682:85616-85635 Msa1349240:three_prime_UTR 30.0%
AAAAAGAATTCCCATGGATA+TGG - tig0010682:85735-85754 None:intergenic 30.0%
TTGTTTCATTTCAATCACTC+TGG + tig0010682:85818-85837 Msa1349240:three_prime_UTR 30.0%
AAGGTTTAAATGGTAAAGGG+GGG - tig0010682:81758-81777 None:intergenic 35.0%
GAAGGTTTAAATGGTAAAGG+GGG - tig0010682:81759-81778 None:intergenic 35.0%
GAGAGTGAAGAAGGTTTAAA+TGG - tig0010682:81768-81787 None:intergenic 35.0%
TGGAGTGAGTTATTTGAAAG+AGG - tig0010682:81797-81816 None:intergenic 35.0%
TGAGAAGAGAATGGTAGAAA+AGG - tig0010682:81853-81872 None:intergenic 35.0%
AAAGAGTAGTGAGAAGAGAA+TGG - tig0010682:81862-81881 None:intergenic 35.0%
!! ACTAAGCTTAGTTTCAGGTT+TGG + tig0010682:81909-81928 Msa1349240:intron 35.0%
TTCATTAGTGAGTGTAGTGT+CGG + tig0010682:81994-82013 Msa1349240:intron 35.0%
AAAGAAAGCAAGGGCAAAAT+TGG - tig0010682:82044-82063 None:intergenic 35.0%
!! ATAAGTTGATGTAGCTAGGA+CGG - tig0010682:82382-82401 None:intergenic 35.0%
AAGAAAAATATTGGGACCAG+CGG + tig0010682:82509-82528 Msa1349240:intron 35.0%
!!! TTGCCCCACGTAATTTTTTA+CGG - tig0010682:82860-82879 None:intergenic 35.0%
!! TTGACTTGCAGAGAAGAAAA+TGG + tig0010682:82964-82983 Msa1349240:intron 35.0%
TTAAGTAACTCTCTACTCAC+CGG - tig0010682:83196-83215 None:intergenic 35.0%
GTCATAATCAAGCAATCAGA+CGG - tig0010682:83305-83324 None:intergenic 35.0%
CATCATAATAGTTCCGTGTA+CGG + tig0010682:83324-83343 Msa1349240:intron 35.0%
AAAGCTACAAACAGACAATC+AGG - tig0010682:83351-83370 None:intergenic 35.0%
AACCATTCATGATGTTGCTA+GGG - tig0010682:83506-83525 None:intergenic 35.0%
AAACCATTCATGATGTTGCT+AGG - tig0010682:83507-83526 None:intergenic 35.0%
AGTGGCAATATGCAATTGAT+TGG - tig0010682:83756-83775 None:intergenic 35.0%
!!! GGTAGTTTGGTCATTTTTTC+AGG + tig0010682:84019-84038 Msa1349240:intron 35.0%
TTCAGGAAACTTGATTGTGT+CGG + tig0010682:84036-84055 Msa1349240:intron 35.0%
TAGATTGACCACCAATTTGA+AGG - tig0010682:84205-84224 None:intergenic 35.0%
GTTCGAAGATCTTCTTTCAT+TGG + tig0010682:84713-84732 Msa1349240:intron 35.0%
AAGATCTTCTTTCATTGGAG+TGG + tig0010682:84718-84737 Msa1349240:CDS 35.0%
AGATCTTCTTTCATTGGAGT+GGG + tig0010682:84719-84738 Msa1349240:CDS 35.0%
! TTGAAAATTTTGCTGAGTCC+CGG + tig0010682:85084-85103 Msa1349240:CDS 35.0%
TGGTTTCTTGACAATAATCC+GGG - tig0010682:85105-85124 None:intergenic 35.0%
AGAATGGTTCACTACTTGTT+AGG + tig0010682:85204-85223 Msa1349240:CDS 35.0%
TATCCTTGCATCTCATTTCA+AGG - tig0010682:85409-85428 None:intergenic 35.0%
!!! TTGGTCATTGGTTTTTGTAC+AGG + tig0010682:85574-85593 Msa1349240:three_prime_UTR 35.0%
!!! TGGTCATTGGTTTTTGTACA+GGG + tig0010682:85575-85594 Msa1349240:three_prime_UTR 35.0%
AACTGCAAAAAGAATTCCCA+TGG - tig0010682:85741-85760 None:intergenic 35.0%
AGCGGTGGCTAAAATACAAT+GGG + tig0010682:82527-82546 Msa1349240:intron 40.0%
GCAACGTAATTCATCCAATG+AGG - tig0010682:82658-82677 None:intergenic 40.0%
CAATAGTACTTCAGACCTCT+CGG + tig0010682:83153-83172 Msa1349240:CDS 40.0%
ACTATTTCCAGCTTGTCACA+CGG + tig0010682:83371-83390 Msa1349240:intron 40.0%
TTCCCTAGCAACATCATGAA+TGG + tig0010682:83501-83520 Msa1349240:intron 40.0%
! TGTGGACGATTCATTTTGTG+AGG + tig0010682:84752-84771 Msa1349240:CDS 40.0%
TCAAGGACAGAAATAGGACT+TGG - tig0010682:84861-84880 None:intergenic 40.0%
CTGCTTTCAAGGACAGAAAT+AGG - tig0010682:84867-84886 None:intergenic 40.0%
!! AAAATCTGAAGAAAGCGCCT+TGG - tig0010682:85066-85085 None:intergenic 40.0%
AAGAAACCAAAGCTCTCTTC+TGG + tig0010682:85116-85135 Msa1349240:CDS 40.0%
AGATAACCAAGACTCCACAA+TGG + tig0010682:85243-85262 Msa1349240:CDS 40.0%
!! CAAGCATTGCAGAGTGTTTT+TGG - tig0010682:85287-85306 None:intergenic 40.0%
AAAACACTCTGCAATGCTTG+CGG + tig0010682:85287-85306 Msa1349240:CDS 40.0%
! AAGGACCTTTTTGTGCGAAT+TGG - tig0010682:85390-85409 None:intergenic 40.0%
! TTTTTGTACAGGGCTGGAAT+GGG + tig0010682:85585-85604 Msa1349240:three_prime_UTR 40.0%
ACAGAAGGAAAGGGAAGAAA+AGG + tig0010682:85626-85645 Msa1349240:three_prime_UTR 40.0%
CAGAAGGAAAGGGAAGAAAA+GGG + tig0010682:85627-85646 Msa1349240:three_prime_UTR 40.0%
GAAGAAAAGGGTAGGATCTT+AGG + tig0010682:85639-85658 Msa1349240:three_prime_UTR 40.0%
TTTAGATCACTTAGGTCGGT+AGG + tig0010682:85671-85690 Msa1349240:three_prime_UTR 40.0%
TAAAGGGGGGTTATGAAGGA+AGG - tig0010682:81745-81764 None:intergenic 45.0%
ATGGTAAAGGGGGGTTATGA+AGG - tig0010682:81749-81768 None:intergenic 45.0%
AGGAAAGAGGAGAGTGAAGA+AGG - tig0010682:81777-81796 None:intergenic 45.0%
GCGACCGTATTTCTTCAGAA+AGG - tig0010682:82272-82291 None:intergenic 45.0%
AAAAATATTGGGACCAGCGG+TGG + tig0010682:82512-82531 Msa1349240:intron 45.0%
!!! CATTGTATTTTAGCCACCGC+TGG - tig0010682:82528-82547 None:intergenic 45.0%
CAGCGGTGGCTAAAATACAA+TGG + tig0010682:82526-82545 Msa1349240:intron 45.0%
TCTATTTGGCGTGACCTCAT+TGG + tig0010682:82641-82660 Msa1349240:intron 45.0%
CTTGCAGAGAAGAAAATGGC+TGG + tig0010682:82968-82987 Msa1349240:intron 45.0%
AACACCGAGTCAGACTCATT+CGG - tig0010682:83127-83146 None:intergenic 45.0%
ACATAATCCGTGTGACAAGC+TGG - tig0010682:83381-83400 None:intergenic 45.0%
! AGCTTGTCACACGGATTATG+TGG + tig0010682:83380-83399 Msa1349240:intron 45.0%
! TTGATTGTGTCGGTGACATG+TGG + tig0010682:84046-84065 Msa1349240:intron 45.0%
CACCCTACTCTCCAATTTGA+GGG + tig0010682:84080-84099 Msa1349240:intron 45.0%
ACCCTACTCTCCAATTTGAG+GGG + tig0010682:84081-84100 Msa1349240:intron 45.0%
ACCCCTCAAATTGGAGAGTA+GGG - tig0010682:84085-84104 None:intergenic 45.0%
GGTGCGCTGTCTCAATTATT+TGG + tig0010682:84102-84121 Msa1349240:intron 45.0%
GGAGAGTCTCACAATGAAAG+TGG + tig0010682:84773-84792 Msa1349240:CDS 45.0%
! TTGCTGACAGCTGATGATGA+TGG - tig0010682:84807-84826 None:intergenic 45.0%
ATCATCATCAGCTGTCAGCA+AGG + tig0010682:84806-84825 Msa1349240:CDS 45.0%
AGCAGGAACTACTGCTTTCA+AGG - tig0010682:84878-84897 None:intergenic 45.0%
TGAGTTGCATAGCAGAACGA+GGG - tig0010682:84989-85008 None:intergenic 45.0%
ATGAGTTGCATAGCAGAACG+AGG - tig0010682:84990-85009 None:intergenic 45.0%
CTCAACAGAAGAGGAAGTAG+GGG - tig0010682:85015-85034 None:intergenic 45.0%
CCTCAACAGAAGAGGAAGTA+GGG - tig0010682:85016-85035 None:intergenic 45.0%
TCCTCAACAGAAGAGGAAGT+AGG - tig0010682:85017-85036 None:intergenic 45.0%
CATGTTCTCCTCAACAGAAG+AGG - tig0010682:85024-85043 None:intergenic 45.0%
GCCTAATGTTATCTCCACCA+AGG + tig0010682:85046-85065 Msa1349240:CDS 45.0%
GCCTTGGTGGAGATAACATT+AGG - tig0010682:85050-85069 None:intergenic 45.0%
TAACCAAGACTCCACAATGG+AGG + tig0010682:85246-85265 Msa1349240:CDS 45.0%
AACCAAGACTCCACAATGGA+GGG + tig0010682:85247-85266 Msa1349240:CDS 45.0%
GCACTCCAATTCGCACAAAA+AGG + tig0010682:85382-85401 Msa1349240:CDS 45.0%
GGTCCTTGAAATGAGATGCA+AGG + tig0010682:85403-85422 Msa1349240:CDS 45.0%
! AAGGCGAGAACATTGGTGTT+TGG - tig0010682:85461-85480 None:intergenic 45.0%
AAACACCAATGTTCTCGCCT+TGG + tig0010682:85460-85479 Msa1349240:CDS 45.0%
GTATTCCAAGGCGAGAACAT+TGG - tig0010682:85468-85487 None:intergenic 45.0%
ATACGACGCGACTCTAGATA+AGG - tig0010682:85526-85545 None:intergenic 45.0%
!!! CATTGGTTTTTGTACAGGGC+TGG + tig0010682:85579-85598 Msa1349240:three_prime_UTR 45.0%
! GTTTTTGTACAGGGCTGGAA+TGG + tig0010682:85584-85603 Msa1349240:three_prime_UTR 45.0%
! TTTTGTACAGGGCTGGAATG+GGG + tig0010682:85586-85605 Msa1349240:three_prime_UTR 45.0%
AGGAAAGGGAAGAAAAGGGT+AGG + tig0010682:85631-85650 Msa1349240:three_prime_UTR 45.0%
!!! GGAGTCAGCGTCTTTTTTCT+TGG + tig0010682:85692-85711 Msa1349240:three_prime_UTR 45.0%
!! TAATATGAAATAAATAAATT+GGG + tig0010682:82471-82490 Msa1349240:intron 5.0%
!!! TTATTTTTATTTTCTAAAAT+TGG + tig0010682:83897-83916 Msa1349240:intron 5.0%
AGGTGTGAGAGAGAGAGAGA+GGG - tig0010682:81833-81852 None:intergenic 50.0%
AAGGTGTGAGAGAGAGAGAG+AGG - tig0010682:81834-81853 None:intergenic 50.0%
! CAACGAGTTGTAGTTTGCCG+CGG - tig0010682:83092-83111 None:intergenic 50.0%
ACAACTCGTTGGCGAGTATC+TGG + tig0010682:83101-83120 Msa1349240:CDS 50.0%
!!! GAGTCTGACTCGGTGTTTTC+TGG + tig0010682:83130-83149 Msa1349240:CDS 50.0%
TAGTACTTCAGACCTCTCGG+CGG + tig0010682:83156-83175 Msa1349240:CDS 50.0%
TCTCTACTCACCGGATCAAC+GGG - tig0010682:83187-83206 None:intergenic 50.0%
CTCTCTACTCACCGGATCAA+CGG - tig0010682:83188-83207 None:intergenic 50.0%
CAGACAATCAGGTCCGTACA+CGG - tig0010682:83340-83359 None:intergenic 50.0%
CCTCAAATTGGAGAGTAGGG+TGG - tig0010682:84082-84101 None:intergenic 50.0%
CCACCCTACTCTCCAATTTG+AGG + tig0010682:84079-84098 Msa1349240:intron 50.0%
CACCCCTCAAATTGGAGAGT+AGG - tig0010682:84086-84105 None:intergenic 50.0%
GGAGTGGGTGTCCAATATTG+TGG + tig0010682:84734-84753 Msa1349240:CDS 50.0%
ATCATCAGCTGTCAGCAAGG+AGG + tig0010682:84809-84828 Msa1349240:CDS 50.0%
GAAAGCAGTAGTTCCTGCTC+TGG + tig0010682:84879-84898 Msa1349240:CDS 50.0%
AATGGGGACGTAAATCCCTG+TGG - tig0010682:84913-84932 None:intergenic 50.0%
AGGGATTTACGTCCCCATTC+CGG + tig0010682:84914-84933 Msa1349240:CDS 50.0%
CATAGCAGAACGAGGGTTGA+AGG - tig0010682:84982-85001 None:intergenic 50.0%
CCCTACTTCCTCTTCTGTTG+AGG + tig0010682:85013-85032 Msa1349240:CDS 50.0%
!! ATCTGAAGAAAGCGCCTTGG+TGG - tig0010682:85063-85082 None:intergenic 50.0%
GTCTCTCCAGAAGAGAGCTT+TGG - tig0010682:85125-85144 None:intergenic 50.0%
!!! CAGAGTGTTTTTGGCCCCAT+TGG - tig0010682:85278-85297 None:intergenic 50.0%
TTGCGGTGTACGCTACAAGT+CGG + tig0010682:85304-85323 Msa1349240:CDS 50.0%
!! CAAAACGTTGGACTAGCAGC+AGG - tig0010682:85353-85372 None:intergenic 50.0%
TGCACAGCTGGACAAAACGT+TGG - tig0010682:85365-85384 None:intergenic 50.0%
GAGAGGGGGGAATAGTGTGT+TGG - tig0010682:81817-81836 None:intergenic 55.0%
TGTGAGAGAGAGAGAGAGGG+GGG - tig0010682:81830-81849 None:intergenic 55.0%
GTGTGAGAGAGAGAGAGAGG+GGG - tig0010682:81831-81850 None:intergenic 55.0%
GGTGTGAGAGAGAGAGAGAG+GGG - tig0010682:81832-81851 None:intergenic 55.0%
! TTGTAGTTTGCCGCGGAGGA+GGG - tig0010682:83085-83104 None:intergenic 55.0%
CGCGGCAAACTACAACTCGT+TGG + tig0010682:83090-83109 Msa1349240:CDS 55.0%
CTGGCCGAATGAGTCTGACT+CGG + tig0010682:83120-83139 Msa1349240:CDS 55.0%
CTCTACTCACCGGATCAACG+GGG - tig0010682:83186-83205 None:intergenic 55.0%
AGACAGCGCACCCCTCAAAT+TGG - tig0010682:84094-84113 None:intergenic 55.0%
CTGTCAGCAAGGAGGACTCT+GGG + tig0010682:84817-84836 Msa1349240:CDS 55.0%
AGCAGTAGTTCCTGCTCTGG+TGG + tig0010682:84882-84901 Msa1349240:CDS 55.0%
TGTGGTCTTTCCACCAGAGC+AGG - tig0010682:84895-84914 None:intergenic 55.0%
TGCTCTGGTGGAAAGACCAC+AGG + tig0010682:84894-84913 Msa1349240:CDS 55.0%
GCTCTGGTGGAAAGACCACA+GGG + tig0010682:84895-84914 Msa1349240:CDS 55.0%
AACGAGGGTTGAAGGCTGTG+GGG - tig0010682:84974-84993 None:intergenic 55.0%
GAACGAGGGTTGAAGGCTGT+GGG - tig0010682:84975-84994 None:intergenic 55.0%
AGAACGAGGGTTGAAGGCTG+TGG - tig0010682:84976-84995 None:intergenic 55.0%
TCAGCTGGAGCAGTAGGAAG+TGG - tig0010682:85173-85192 None:intergenic 55.0%
TTCTGTTCGCCACTGTCAGC+TGG - tig0010682:85188-85207 None:intergenic 55.0%
GCTGACAGTGGCGAACAGAA+TGG + tig0010682:85188-85207 Msa1349240:CDS 55.0%
TGCCCTCCATTGTGGAGTCT+TGG - tig0010682:85252-85271 None:intergenic 55.0%
AAGACTCCACAATGGAGGGC+AGG + tig0010682:85251-85270 Msa1349240:CDS 55.0%
ATTGGACCTGCCCTCCATTG+TGG - tig0010682:85260-85279 None:intergenic 55.0%
ACAATGGAGGGCAGGTCCAA+TGG + tig0010682:85259-85278 Msa1349240:CDS 55.0%
CAATGGAGGGCAGGTCCAAT+GGG + tig0010682:85260-85279 Msa1349240:CDS 55.0%
AATGGAGGGCAGGTCCAATG+GGG + tig0010682:85261-85280 Msa1349240:CDS 55.0%
TGCGGTGTACGCTACAAGTC+GGG + tig0010682:85305-85324 Msa1349240:CDS 55.0%
GCCGACTATTCCCCGAATAC+CGG + tig0010682:85327-85346 Msa1349240:CDS 55.0%
GCCGGTATTCGGGGAATAGT+CGG - tig0010682:85331-85350 None:intergenic 55.0%
ACTAGCAGCAGGCCGGTATT+CGG - tig0010682:85342-85361 None:intergenic 55.0%
TGCGAATTGGAGTGCACAGC+TGG - tig0010682:85377-85396 None:intergenic 55.0%
ACGCGACTCTAGATAAGGCG+AGG - tig0010682:85521-85540 None:intergenic 55.0%
AGGGCTGGAATGGGGAGAAT+AGG + tig0010682:85594-85613 Msa1349240:three_prime_UTR 55.0%
! AGCGGTGTCAACGTCGTCGA+CGG - tig0010682:83050-83069 None:intergenic 60.0%
! GTTGTAGTTTGCCGCGGAGG+AGG - tig0010682:83086-83105 None:intergenic 60.0%
! CGAGTTGTAGTTTGCCGCGG+AGG - tig0010682:83089-83108 None:intergenic 60.0%
GCTGTCAGCAAGGAGGACTC+TGG + tig0010682:84816-84835 Msa1349240:CDS 60.0%
CCACTGTCAGCTGGAGCAGT+AGG - tig0010682:85179-85198 None:intergenic 60.0%
CCTACTGCTCCAGCTGACAG+TGG + tig0010682:85176-85195 Msa1349240:CDS 60.0%
TAGCAGCAGGCCGGTATTCG+GGG - tig0010682:85340-85359 None:intergenic 60.0%
CTAGCAGCAGGCCGGTATTC+GGG - tig0010682:85341-85360 None:intergenic 60.0%
!! ACGTTGGACTAGCAGCAGGC+CGG - tig0010682:85349-85368 None:intergenic 60.0%
! CGGTGTCAACGTCGTCGACG+GGG - tig0010682:83048-83067 None:intergenic 65.0%
! GCGGTGTCAACGTCGTCGAC+GGG - tig0010682:83049-83068 None:intergenic 65.0%
GGAGGGCAATGAAGCGGCAG+CGG - tig0010682:83068-83087 None:intergenic 65.0%
CGCGGAGGAGGGCAATGAAG+CGG - tig0010682:83074-83093 None:intergenic 65.0%
CGCTTCATTGCCCTCCTCCG+CGG + tig0010682:83072-83091 Msa1349240:CDS 65.0%
GTCCCCATTCCGGTGCCTTG+CGG + tig0010682:84924-84943 Msa1349240:CDS 65.0%
!! GTCCGCAAGGCACCGGAATG+GGG - tig0010682:84929-84948 None:intergenic 65.0%
!! CGTCCGCAAGGCACCGGAAT+GGG - tig0010682:84930-84949 None:intergenic 65.0%
!! ACGTCCGCAAGGCACCGGAA+TGG - tig0010682:84931-84950 None:intergenic 65.0%
TTGGTGCGTGCACGTCCGCA+AGG - tig0010682:84942-84961 None:intergenic 65.0%
GGCGGAGCTCCCCGTTGATC+CGG + tig0010682:83174-83193 Msa1349240:CDS 70.0%
CGTGCACGTCCGCAAGGCAC+CGG - tig0010682:84936-84955 None:intergenic 70.0%
GGGTTGAAGGCTGTGGGGCG+TGG - tig0010682:84969-84988 None:intergenic 70.0%
CAACGGGGAGCTCCGCCGAG+AGG - tig0010682:83171-83190 None:intergenic 75.0%
GGCTGTGGGGCGTGGACGCT+TGG - tig0010682:84961-84980 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0010682 gene 81707 85850 81707 ID=Msa1349240;Name=Msa1349240
tig0010682 mRNA 81707 85850 81707 ID=Msa1349240-mRNA-1;Parent=Msa1349240;Name=Msa1349240-mRNA-1;_AED=0.06;_eAED=0.06;_QI=173|1|1|1|0.25|0.2|5|354|331
tig0010682 exon 81707 81736 81707 ID=Msa1349240-mRNA-1:exon:6813;Parent=Msa1349240-mRNA-1
tig0010682 exon 81846 81925 81846 ID=Msa1349240-mRNA-1:exon:6814;Parent=Msa1349240-mRNA-1
tig0010682 exon 82149 82203 82149 ID=Msa1349240-mRNA-1:exon:6815;Parent=Msa1349240-mRNA-1
tig0010682 exon 82975 83195 82975 ID=Msa1349240-mRNA-1:exon:6816;Parent=Msa1349240-mRNA-1
tig0010682 exon 84714 85850 84714 ID=Msa1349240-mRNA-1:exon:6817;Parent=Msa1349240-mRNA-1
tig0010682 five_prime_UTR 81707 81736 81707 ID=Msa1349240-mRNA-1:five_prime_utr;Parent=Msa1349240-mRNA-1
tig0010682 five_prime_UTR 81846 81925 81846 ID=Msa1349240-mRNA-1:five_prime_utr;Parent=Msa1349240-mRNA-1
tig0010682 five_prime_UTR 82149 82203 82149 ID=Msa1349240-mRNA-1:five_prime_utr;Parent=Msa1349240-mRNA-1
tig0010682 five_prime_UTR 82975 82982 82975 ID=Msa1349240-mRNA-1:five_prime_utr;Parent=Msa1349240-mRNA-1
tig0010682 CDS 82983 83195 82983 ID=Msa1349240-mRNA-1:cds;Parent=Msa1349240-mRNA-1
tig0010682 CDS 84714 85496 84714 ID=Msa1349240-mRNA-1:cds;Parent=Msa1349240-mRNA-1
tig0010682 three_prime_UTR 85497 85850 85497 ID=Msa1349240-mRNA-1:three_prime_utr;Parent=Msa1349240-mRNA-1
Gene Sequence

>Msa1349240

ATGGCTGGAACAATGAACGAGATTGATTGCTTCAACTTATTTGACAACATTGATGACATCTACCCCGTCGACGACGTTGACACCGCTGCCGCTTCATTGCCCTCCTCCGCGGCAAACTACAACTCGTTGGCGAGTATCTGGCCGAATGAGTCTGACTCGGTGTTTTCTGGCAATAGTACTTCAGACCTCTCGGCGGAGCTCCCCGTTGATCCGTTCGAAGATCTTCTTTCATTGGAGTGGGTGTCCAATATTGTGGACGATTCATTTTGTGAGGAGAGTCTCACAATGAAAGTGGAGCAGCAGCCATCATCATCAGCTGTCAGCAAGGAGGACTCTGGGCATTATCAATTTCAGACACCAAGTCCTATTTCTGTCCTTGAAAGCAGTAGTTCCTGCTCTGGTGGAAAGACCACAGGGATTTACGTCCCCATTCCGGTGCCTTGCGGACGTGCACGCACCAAGCGTCCACGCCCCACAGCCTTCAACCCTCGTTCTGCTATGCAACTCATTTCCCCTACTTCCTCTTCTGTTGAGGAGAACATGCAGCCTAATGTTATCTCCACCAAGGCGCTTTCTTCAGATTTTGAAAATTTTGCTGAGTCCCGGATTATTGTCAAGAAACCAAAGCTCTCTTCTGGAGAGACCAAGAAGAAAAAGAAAATCAAGGCACCACTTCCTACTGCTCCAGCTGACAGTGGCGAACAGAATGGTTCACTACTTGTTAGGAAATGCATGCATTGTGAGATAACCAAGACTCCACAATGGAGGGCAGGTCCAATGGGGCCAAAAACACTCTGCAATGCTTGCGGTGTACGCTACAAGTCGGGCCGACTATTCCCCGAATACCGGCCTGCTGCTAGTCCAACGTTTTGTCCAGCTGTGCACTCCAATTCGCACAAAAAGGTCCTTGAAATGAGATGCAAGGATAGTTTTGAATCAGATTCAGCTGAACTCATTCCAAACACCAATGTTCTCGCCTTGGAATACAACATTTGA
Protein sequence

>Msa1349240

MAGTMNEIDCFNLFDNIDDIYPVDDVDTAAASLPSSAANYNSLASIWPNESDSVFSGNSTSDLSAELPVDPFEDLLSLEWVSNIVDDSFCEESLTMKVEQQPSSSAVSKEDSGHYQFQTPSPISVLESSSSCSGGKTTGIYVPIPVPCGRARTKRPRPTAFNPRSAMQLISPTSSSVEENMQPNVISTKALSSDFENFAESRIIVKKPKLSSGETKKKKKIKAPLPTAPADSGEQNGSLLVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPAVHSNSHKKVLEMRCKDSFESDSAELIPNTNVLALEYNI*