Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350470 | XP_013456815.1 | 99.643 | 561 | 2 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1163 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350470 | sp|Q9ZVF7|ESMD1_ARATH | 80.072 | 557 | 110 | 1 | 2 | 557 | 5 | 561 | 0.0 | 951 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350470 | A0A072UNB9 | 99.643 | 561 | 2 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1163 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0651330 | Msa1350470 | 0.986991 | 1.126900e-168 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350470 | MtrunA17_Chr4g0043911 | 99.643 | 561 | 2 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1163 |
Msa1350470 | MtrunA17_Chr1g0160781 | 82.700 | 526 | 86 | 1 | 25 | 550 | 29 | 549 | 0.0 | 919 |
Msa1350470 | MtrunA17_Chr3g0077321 | 58.300 | 506 | 203 | 3 | 51 | 548 | 40 | 545 | 0.0 | 638 |
Msa1350470 | MtrunA17_Chr5g0424241 | 57.085 | 494 | 200 | 4 | 64 | 547 | 68 | 559 | 0.0 | 595 |
Msa1350470 | MtrunA17_Chr3g0123521 | 42.955 | 440 | 230 | 12 | 124 | 549 | 117 | 549 | 1.11e-115 | 354 |
Msa1350470 | MtrunA17_Chr2g0284071 | 40.948 | 464 | 229 | 12 | 124 | 548 | 184 | 641 | 9.39e-110 | 341 |
Msa1350470 | MtrunA17_Chr4g0056061 | 38.866 | 494 | 270 | 14 | 68 | 554 | 28 | 496 | 8.04e-105 | 325 |
Msa1350470 | MtrunA17_Chr5g0399311 | 41.509 | 424 | 225 | 10 | 132 | 554 | 111 | 512 | 1.37e-103 | 322 |
Msa1350470 | MtrunA17_Chr3g0132951 | 38.210 | 458 | 248 | 11 | 119 | 549 | 68 | 517 | 3.87e-102 | 318 |
Msa1350470 | MtrunA17_Chr5g0412251 | 37.660 | 470 | 258 | 12 | 106 | 548 | 41 | 502 | 5.23e-99 | 309 |
Msa1350470 | MtrunA17_Chr5g0426591 | 39.775 | 445 | 230 | 10 | 126 | 549 | 86 | 513 | 8.23e-97 | 304 |
Msa1350470 | MtrunA17_Chr5g0448581 | 41.562 | 397 | 213 | 8 | 153 | 548 | 122 | 500 | 1.31e-96 | 305 |
Msa1350470 | MtrunA17_Chr3g0143821 | 38.190 | 453 | 253 | 10 | 67 | 512 | 26 | 458 | 2.02e-96 | 305 |
Msa1350470 | MtrunA17_Chr3g0132371 | 34.676 | 571 | 300 | 17 | 19 | 548 | 1 | 539 | 1.49e-90 | 288 |
Msa1350470 | MtrunA17_Chr4g0075311 | 38.395 | 461 | 242 | 11 | 126 | 549 | 138 | 593 | 2.17e-87 | 281 |
Msa1350470 | MtrunA17_Chr3g0129981 | 37.838 | 444 | 233 | 13 | 126 | 547 | 89 | 511 | 8.49e-87 | 278 |
Msa1350470 | MtrunA17_Chr4g0070551 | 37.307 | 453 | 242 | 15 | 118 | 552 | 194 | 622 | 5.02e-86 | 279 |
Msa1350470 | MtrunA17_Chr4g0008451 | 36.199 | 442 | 244 | 13 | 122 | 547 | 202 | 621 | 1.86e-83 | 273 |
Msa1350470 | MtrunA17_Chr5g0436321 | 37.136 | 412 | 225 | 10 | 150 | 548 | 161 | 551 | 2.90e-82 | 267 |
Msa1350470 | MtrunA17_Chr4g0042711 | 35.337 | 416 | 242 | 10 | 150 | 554 | 97 | 496 | 3.51e-81 | 263 |
Msa1350470 | MtrunA17_Chr2g0307971 | 35.613 | 424 | 244 | 9 | 149 | 560 | 114 | 520 | 1.80e-80 | 261 |
Msa1350470 | MtrunA17_Chr6g0455571 | 36.010 | 411 | 233 | 10 | 149 | 546 | 114 | 507 | 4.97e-80 | 260 |
Msa1350470 | MtrunA17_Chr4g0061781 | 36.386 | 415 | 234 | 10 | 149 | 550 | 115 | 512 | 1.68e-79 | 259 |
Msa1350470 | MtrunA17_Chr5g0417871 | 34.383 | 413 | 248 | 10 | 150 | 553 | 85 | 483 | 1.11e-77 | 253 |
Msa1350470 | MtrunA17_Chr1g0204121 | 35.526 | 456 | 251 | 14 | 117 | 550 | 43 | 477 | 4.67e-76 | 249 |
Msa1350470 | MtrunA17_Chr1g0204141 | 35.652 | 460 | 248 | 15 | 117 | 550 | 43 | 480 | 7.94e-75 | 246 |
Msa1350470 | MtrunA17_Chr3g0087291 | 33.793 | 435 | 258 | 10 | 124 | 547 | 141 | 556 | 1.65e-69 | 234 |
Msa1350470 | MtrunA17_Chr4g0010511 | 33.790 | 438 | 260 | 9 | 127 | 553 | 204 | 622 | 1.20e-68 | 233 |
Msa1350470 | MtrunA17_Chr4g0003561 | 32.642 | 386 | 220 | 14 | 126 | 501 | 48 | 403 | 2.07e-48 | 174 |
Msa1350470 | MtrunA17_Chr1g0146501 | 29.048 | 420 | 242 | 11 | 44 | 443 | 2 | 385 | 3.22e-36 | 143 |
Msa1350470 | MtrunA17_Chr3g0127811 | 31.153 | 321 | 197 | 7 | 130 | 441 | 38 | 343 | 2.75e-33 | 132 |
Msa1350470 | MtrunA17_Chr7g0220381 | 27.961 | 304 | 197 | 8 | 149 | 440 | 97 | 390 | 7.79e-31 | 127 |
Msa1350470 | MtrunA17_Chr4g0002361 | 23.011 | 352 | 222 | 8 | 135 | 480 | 70 | 378 | 3.22e-17 | 84.3 |
Msa1350470 | MtrunA17_Chr7g0240241 | 34.074 | 135 | 73 | 4 | 321 | 449 | 6 | 130 | 3.16e-14 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1350470 | AT2G01480.1 | 80.072 | 557 | 110 | 1 | 2 | 557 | 5 | 561 | 0.0 | 951 |
Msa1350470 | AT1G14970.1 | 74.101 | 556 | 138 | 1 | 2 | 557 | 13 | 562 | 0.0 | 873 |
Msa1350470 | AT2G01480.2 | 80.157 | 509 | 100 | 1 | 2 | 509 | 5 | 513 | 0.0 | 869 |
Msa1350470 | AT1G14970.2 | 80.230 | 435 | 86 | 0 | 123 | 557 | 8 | 442 | 0.0 | 757 |
Msa1350470 | AT1G14970.3 | 80.723 | 415 | 80 | 0 | 143 | 557 | 2 | 416 | 0.0 | 724 |
Msa1350470 | AT1G35510.1 | 56.157 | 536 | 219 | 6 | 23 | 548 | 28 | 557 | 0.0 | 623 |
Msa1350470 | AT1G38131.1 | 54.949 | 495 | 204 | 3 | 68 | 547 | 67 | 557 | 0.0 | 570 |
Msa1350470 | AT1G38065.2 | 57.981 | 426 | 164 | 2 | 137 | 547 | 3 | 428 | 0.0 | 528 |
Msa1350470 | AT1G38065.1 | 59.169 | 409 | 162 | 1 | 144 | 547 | 30 | 438 | 0.0 | 523 |
Msa1350470 | AT3G26370.1 | 43.249 | 437 | 227 | 11 | 127 | 549 | 128 | 557 | 9.77e-117 | 357 |
Msa1350470 | AT5G65470.1 | 39.073 | 453 | 239 | 12 | 124 | 547 | 58 | 502 | 9.32e-100 | 311 |
Msa1350470 | AT4G38390.1 | 40.695 | 403 | 222 | 7 | 149 | 550 | 122 | 508 | 2.32e-98 | 309 |
Msa1350470 | AT4G24530.1 | 36.575 | 473 | 264 | 13 | 103 | 548 | 54 | 517 | 9.46e-98 | 307 |
Msa1350470 | AT4G16650.2 | 37.383 | 535 | 287 | 16 | 35 | 558 | 17 | 514 | 1.18e-97 | 307 |
Msa1350470 | AT4G16650.1 | 37.383 | 535 | 287 | 16 | 35 | 558 | 17 | 514 | 1.18e-97 | 307 |
Msa1350470 | AT1G29200.4 | 39.148 | 493 | 255 | 15 | 97 | 548 | 6 | 494 | 2.59e-97 | 305 |
Msa1350470 | AT1G29200.1 | 39.148 | 493 | 255 | 15 | 97 | 548 | 6 | 494 | 2.59e-97 | 305 |
Msa1350470 | AT1G29200.2 | 40.177 | 453 | 231 | 12 | 132 | 548 | 162 | 610 | 4.13e-96 | 305 |
Msa1350470 | AT1G62330.1 | 37.797 | 463 | 245 | 11 | 126 | 550 | 195 | 652 | 6.52e-96 | 306 |
Msa1350470 | AT1G76270.1 | 39.161 | 429 | 234 | 10 | 126 | 547 | 78 | 486 | 9.92e-94 | 298 |
Msa1350470 | AT1G20550.1 | 38.318 | 428 | 239 | 9 | 126 | 547 | 81 | 489 | 1.24e-92 | 295 |
Msa1350470 | AT1G22460.1 | 38.288 | 444 | 233 | 11 | 126 | 548 | 135 | 558 | 1.01e-91 | 293 |
Msa1350470 | AT1G11990.1 | 38.902 | 437 | 244 | 13 | 126 | 549 | 164 | 590 | 2.23e-91 | 292 |
Msa1350470 | AT1G29200.3 | 40.426 | 423 | 218 | 10 | 156 | 548 | 2 | 420 | 4.52e-91 | 286 |
Msa1350470 | AT5G01100.1 | 36.575 | 473 | 255 | 15 | 98 | 547 | 158 | 608 | 7.83e-89 | 287 |
Msa1350470 | AT1G11990.2 | 35.950 | 484 | 251 | 14 | 119 | 549 | 135 | 612 | 1.23e-86 | 281 |
Msa1350470 | AT5G64600.1 | 37.277 | 448 | 234 | 13 | 124 | 547 | 90 | 514 | 2.55e-86 | 277 |
Msa1350470 | AT3G54100.1 | 36.283 | 452 | 254 | 14 | 123 | 560 | 193 | 624 | 2.31e-85 | 278 |
Msa1350470 | AT2G37980.1 | 36.961 | 441 | 240 | 14 | 123 | 547 | 197 | 615 | 2.51e-85 | 278 |
Msa1350470 | AT1G04910.1 | 37.029 | 451 | 261 | 12 | 107 | 550 | 43 | 477 | 9.93e-84 | 270 |
Msa1350470 | AT5G35570.1 | 36.044 | 455 | 247 | 15 | 112 | 547 | 211 | 640 | 2.50e-82 | 270 |
Msa1350470 | AT1G14020.1 | 35.561 | 419 | 237 | 10 | 150 | 554 | 91 | 490 | 2.31e-79 | 258 |
Msa1350470 | AT5G15740.1 | 36.341 | 410 | 231 | 10 | 150 | 546 | 106 | 498 | 1.97e-78 | 256 |
Msa1350470 | AT3G02250.1 | 37.430 | 358 | 206 | 6 | 149 | 503 | 105 | 447 | 2.07e-77 | 253 |
Msa1350470 | AT2G03280.1 | 37.398 | 369 | 209 | 7 | 150 | 512 | 88 | 440 | 5.14e-75 | 246 |
Msa1350470 | AT2G44500.1 | 34.157 | 445 | 264 | 9 | 126 | 559 | 147 | 573 | 1.69e-73 | 245 |
Msa1350470 | AT5G63390.1 | 33.182 | 440 | 265 | 11 | 120 | 548 | 128 | 549 | 7.27e-70 | 235 |
Msa1350470 | AT2G03280.2 | 34.848 | 396 | 209 | 8 | 150 | 512 | 88 | 467 | 7.20e-69 | 231 |
Msa1350470 | AT3G07900.1 | 32.886 | 447 | 271 | 9 | 117 | 552 | 149 | 577 | 2.75e-66 | 226 |
Msa1350470 | AT3G26370.2 | 43.373 | 249 | 127 | 7 | 127 | 364 | 128 | 373 | 9.77e-62 | 209 |
Msa1350470 | AT1G52630.1 | 31.522 | 368 | 214 | 12 | 124 | 482 | 45 | 383 | 1.91e-43 | 160 |
Msa1350470 | AT2G44500.2 | 35.055 | 271 | 154 | 6 | 127 | 389 | 148 | 404 | 4.12e-39 | 148 |
Msa1350470 | AT3G03810.2 | 31.897 | 348 | 219 | 8 | 108 | 443 | 43 | 384 | 2.61e-38 | 150 |
Msa1350470 | AT3G03810.1 | 31.897 | 348 | 219 | 8 | 108 | 443 | 43 | 384 | 2.61e-38 | 150 |
Msa1350470 | AT1G52630.2 | 29.503 | 322 | 194 | 9 | 166 | 482 | 2 | 295 | 1.34e-33 | 131 |
Msa1350470 | AT3G30300.2 | 29.276 | 304 | 193 | 8 | 150 | 441 | 100 | 393 | 1.67e-33 | 135 |
Msa1350470 | AT3G30300.1 | 29.276 | 304 | 193 | 8 | 150 | 441 | 100 | 393 | 1.67e-33 | 135 |
Msa1350470 | AT1G51630.1 | 24.363 | 353 | 215 | 10 | 135 | 480 | 75 | 382 | 4.16e-20 | 93.6 |
Msa1350470 | AT3G21190.1 | 24.928 | 345 | 210 | 8 | 144 | 483 | 84 | 384 | 1.68e-19 | 91.7 |
Find 205 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCCGGTATGCTTCTTTATA+TGG | 0.109099 | tig0011531:+30236 | Msa1350470:CDS |
AAGAGGAACTTTCTACATTT+AGG | 0.164218 | tig0011531:+34864 | Msa1350470:CDS |
TGACAAATGTTCACAATTTC+AGG | 0.196692 | tig0011531:+33194 | Msa1350470:CDS |
TTCTGTGGCCCAGCAGAAAA+TGG | 0.227977 | tig0011531:-35059 | Msa1350470:intergenic |
ACATAGCTCACTCAATGTTT+TGG | 0.259450 | tig0011531:-35705 | Msa1350470:intergenic |
AATGCTAACTTCCGCTTATC+AGG | 0.262820 | tig0011531:-35117 | Msa1350470:intergenic |
TTCCATTCACCACCTCTATA+TGG | 0.264650 | tig0011531:-31802 | Msa1350470:intergenic |
AATGATACATTACCCTATAT+TGG | 0.266570 | tig0011531:-35154 | Msa1350470:intergenic |
GCTTTATTCTAATCTGAAAA+AGG | 0.270843 | tig0011531:+30332 | Msa1350470:CDS |
CTCTTTGATAATCCCAATAT+AGG | 0.275521 | tig0011531:+35141 | Msa1350470:CDS |
CCGCCTTGGACCGCCCTTGC+CGG | 0.276203 | tig0011531:-30092 | Msa1350470:intergenic |
AGAGAGCGTAGTGCCGTTAA+TGG | 0.286345 | tig0011531:+34187 | Msa1350470:CDS |
TTCACATTTCCAGTAAATTC+AGG | 0.288514 | tig0011531:+33071 | Msa1350470:intron |
TTTGACCATAGGTGAATCTT+TGG | 0.291990 | tig0011531:+34153 | Msa1350470:CDS |
AGAGGAACTTTCTACATTTA+GGG | 0.292975 | tig0011531:+34865 | Msa1350470:CDS |
GTCTCCTTCGTATGCAAATT+AGG | 0.298986 | tig0011531:-34830 | Msa1350470:intergenic |
ACTTCCATTATCATAGTATA+TGG | 0.303169 | tig0011531:+32894 | Msa1350470:CDS |
AATGGAAAATGTTCCTTTGC+AGG | 0.308996 | tig0011531:+35674 | Msa1350470:three_prime_UTR |
CTTGCCGGAGGCGCGGCGAC+CGG | 0.312151 | tig0011531:-30077 | Msa1350470:intergenic |
CGGTCGCCGCGCCTCCGGCA+AGG | 0.329807 | tig0011531:+30078 | Msa1350470:CDS |
TAGCAAATTACGAGGCTTTA+CGG | 0.331573 | tig0011531:+34116 | Msa1350470:CDS |
TGTTCTAGAATTATTCTTCC+AGG | 0.334104 | tig0011531:+34965 | Msa1350470:intron |
TCTTTCAGATATCTACAATA+TGG | 0.334839 | tig0011531:+31773 | Msa1350470:intron |
ATGATACATTACCCTATATT+GGG | 0.341853 | tig0011531:-35153 | Msa1350470:intergenic |
CTCCAGTTGTCCAGCGCCTC+AGG | 0.347072 | tig0011531:+34089 | Msa1350470:CDS |
CTTTCCATATACTATGATAA+TGG | 0.356710 | tig0011531:-32898 | Msa1350470:intergenic |
ATACTATGATAATGGAAGTT+TGG | 0.357971 | tig0011531:-32890 | Msa1350470:intergenic |
GGCCTGATGCTGAGGGGAAT+GGG | 0.359232 | tig0011531:+34722 | Msa1350470:CDS |
AACATATTTACCGCCATTAA+CGG | 0.366273 | tig0011531:-34200 | Msa1350470:intergenic |
CACCTGAGGCGCTGGACAAC+TGG | 0.366436 | tig0011531:-34091 | Msa1350470:intergenic |
TCTTTGATAATCCCAATATA+GGG | 0.370622 | tig0011531:+35142 | Msa1350470:CDS |
CGGCAAGGGCGGTCCAAGGC+GGG | 0.375456 | tig0011531:+30093 | Msa1350470:CDS |
TGGCCTGATGCTGAGGGGAA+TGG | 0.376541 | tig0011531:+34721 | Msa1350470:CDS |
TGCAATGCCGTTGCTGTGGC+TGG | 0.378237 | tig0011531:+32842 | Msa1350470:CDS |
GATTCACCTATGGTCAAAAT+AGG | 0.383591 | tig0011531:-34148 | Msa1350470:intergenic |
AGCAAAATTTCTCAATTGCT+TGG | 0.386006 | tig0011531:-36089 | Msa1350470:intergenic |
ATCTACTCATGGAATTTGAT+TGG | 0.388566 | tig0011531:+35462 | Msa1350470:exon |
CGCTCCGGTCGCCGCGCCTC+CGG | 0.401305 | tig0011531:+30073 | Msa1350470:CDS |
GCTGAGTTGGATGCTGCTTT+CGG | 0.403095 | tig0011531:+30164 | Msa1350470:CDS |
GCCGGTATGCTTCTTTATAT+GGG | 0.404874 | tig0011531:+30237 | Msa1350470:CDS |
CAAAATATGAAACTGATAAC+AGG | 0.405338 | tig0011531:-35941 | Msa1350470:intergenic |
TTGGCACGGCACATACATTC+TGG | 0.406203 | tig0011531:-35403 | Msa1350470:intergenic |
GGTCGCCGCGCCTCCGGCAA+GGG | 0.413658 | tig0011531:+30079 | Msa1350470:CDS |
TGGAAATAGCCAAGAGGAAC+TGG | 0.419509 | tig0011531:+36144 | Msa1350470:three_prime_UTR |
AATGCCCGCTGCTCGGTAGC+CGG | 0.423216 | tig0011531:-30026 | Msa1350470:intergenic |
TGTTCACAATTTCAGGATCA+AGG | 0.427509 | tig0011531:+33201 | Msa1350470:CDS |
TCTGTGGCCCAGCAGAAAAT+GGG | 0.435357 | tig0011531:-35058 | Msa1350470:intergenic |
AACCCATTCCCCTCAGCATC+AGG | 0.438857 | tig0011531:-34724 | Msa1350470:intergenic |
TCTTCACCCTCCGGTGGAGG+AGG | 0.440937 | tig0011531:+30123 | Msa1350470:CDS |
GCAGGACGGTGTTTAATAAT+CGG | 0.452957 | tig0011531:-30282 | Msa1350470:intergenic |
CGGTGCTTCTCCGGCGACAA+GGG | 0.453681 | tig0011531:+30184 | Msa1350470:CDS |
TCACATTTCCAGTAAATTCA+GGG | 0.453964 | tig0011531:+33072 | Msa1350470:intron |
TTGCTAAGCACCTGAGGCGC+TGG | 0.454996 | tig0011531:-34099 | Msa1350470:intergenic |
CTGGAGCAATCAGGATCAAC+GGG | 0.458461 | tig0011531:+34484 | Msa1350470:CDS |
TTCAGGTTGGCCTGATGCTG+AGG | 0.462435 | tig0011531:+34714 | Msa1350470:intron |
AGGCATGGTCACAAAATCAT+AGG | 0.463488 | tig0011531:-35496 | Msa1350470:intergenic |
TGCCTTCTCACCGGATGGGA+AGG | 0.465129 | tig0011531:-35564 | Msa1350470:intergenic |
TGAAGAAAATTTCCCCGCCT+TGG | 0.465495 | tig0011531:-30106 | Msa1350470:intergenic |
ATTAAACACCGTCCTGCTCC+TGG | 0.468289 | tig0011531:+30288 | Msa1350470:CDS |
AAAGGGAAATTTACAAAGCC+TGG | 0.469236 | tig0011531:+34447 | Msa1350470:CDS |
GAATGTAGGTTCGTGAAGAA+AGG | 0.469854 | tig0011531:-29840 | Msa1350470:intergenic |
CCGTTGATCCTGATTGCTCC+AGG | 0.470975 | tig0011531:-34483 | Msa1350470:intergenic |
TGCTGCCAAATCTTTCCATC+AGG | 0.471344 | tig0011531:-33168 | Msa1350470:intergenic |
GTTTAGCGCAGAGGCTGAGT+TGG | 0.475791 | tig0011531:+30151 | Msa1350470:CDS |
TGCACCGGCTACCGAGCAGC+GGG | 0.476872 | tig0011531:+30022 | Msa1350470:CDS |
TCAGGTTGGCCTGATGCTGA+GGG | 0.482463 | tig0011531:+34715 | Msa1350470:intron |
GAGTACCTGATGGAAAGATT+TGG | 0.483424 | tig0011531:+33163 | Msa1350470:CDS |
TCTTTCTGTGTGTATCAAAA+CGG | 0.484274 | tig0011531:-29945 | Msa1350470:intergenic |
TCTGTACATTAACAAAATCC+AGG | 0.489049 | tig0011531:+35863 | Msa1350470:three_prime_UTR |
GGCGTCGAATGCCCGCTGCT+CGG | 0.491324 | tig0011531:-30033 | Msa1350470:intergenic |
GTAATCTATAGCAGCCATCC+TGG | 0.491391 | tig0011531:-34983 | Msa1350470:intergenic |
TGCTGCTTTCGGTGCTTCTC+CGG | 0.491965 | tig0011531:+30175 | Msa1350470:CDS |
AGTATGATATTCATGTGTTA+AGG | 0.492076 | tig0011531:+35823 | Msa1350470:three_prime_UTR |
CCTTCTCACCGGATGGGAAG+GGG | 0.493168 | tig0011531:-35562 | Msa1350470:intergenic |
AGGAATTGGATCAAATATCA+AGG | 0.493243 | tig0011531:+35610 | Msa1350470:three_prime_UTR |
TTGCTCCAGGACGTATGATT+CGG | 0.493631 | tig0011531:-34470 | Msa1350470:intergenic |
TACATATATGTAGAGGCTAA+TGG | 0.494144 | tig0011531:+32695 | Msa1350470:CDS |
TTTGCATACGAAGGAGACTC+TGG | 0.497099 | tig0011531:+34835 | Msa1350470:CDS |
GCCTTCTCACCGGATGGGAA+GGG | 0.497500 | tig0011531:-35563 | Msa1350470:intergenic |
TTAGGAAACATTTGTAGTAG+TGG | 0.498241 | tig0011531:-34812 | Msa1350470:intergenic |
CTTCACCCTCCGGTGGAGGA+GGG | 0.498330 | tig0011531:+30124 | Msa1350470:CDS |
CCCCTTCCCATCCGGTGAGA+AGG | 0.499091 | tig0011531:+35562 | Msa1350470:three_prime_UTR |
GTCCATATAGAGGTGGTGAA+TGG | 0.499927 | tig0011531:+31800 | Msa1350470:CDS |
ATGATTGCTGCAAGAGAAAG+AGG | 0.500394 | tig0011531:+34420 | Msa1350470:CDS |
CCGGCAAGGGCGGTCCAAGG+CGG | 0.501162 | tig0011531:+30092 | Msa1350470:CDS |
TCATACGTCCTGGAGCAATC+AGG | 0.501976 | tig0011531:+34475 | Msa1350470:CDS |
ATAGTATATGGAAAGATCCT+AGG | 0.502813 | tig0011531:+32906 | Msa1350470:CDS |
GGGTATGCCTTCTCACCGGA+TGG | 0.504487 | tig0011531:-35569 | Msa1350470:intergenic |
AAGGACAATCTATTCGCAAA+AGG | 0.504698 | tig0011531:-34058 | Msa1350470:intergenic |
CTTCTCACCGGATGGGAAGG+GGG | 0.506209 | tig0011531:-35561 | Msa1350470:intergenic |
TCGGTGCTTCTCCGGCGACA+AGG | 0.506944 | tig0011531:+30183 | Msa1350470:CDS |
CGTAATTTGCTAAGCACCTG+AGG | 0.507845 | tig0011531:-34105 | Msa1350470:intergenic |
GAAGAAACAGAGTTTAAGAG+TGG | 0.507980 | tig0011531:+36124 | Msa1350470:three_prime_UTR |
CACATCTCTATAATACTGAA+TGG | 0.508393 | tig0011531:-33233 | Msa1350470:intergenic |
CGGAGGCGCGGCGACCGGAG+CGG | 0.510117 | tig0011531:-30072 | Msa1350470:intergenic |
CGCCGCGCCTCCGGCAAGGG+CGG | 0.512409 | tig0011531:+30082 | Msa1350470:CDS |
TAAACTCCTCCCTCCTCCAC+CGG | 0.512809 | tig0011531:-30133 | Msa1350470:intergenic |
AAGCTGTATATAGAGTCATT+TGG | 0.516192 | tig0011531:-35373 | Msa1350470:intergenic |
CCTCCGGCAAGGGCGGTCCA+AGG | 0.516352 | tig0011531:+30089 | Msa1350470:CDS |
TTCAACCAAAGATTCACCTA+TGG | 0.516389 | tig0011531:-34158 | Msa1350470:intergenic |
CCTAAAACAGACCAAGAAAA+CGG | 0.521570 | tig0011531:-35897 | Msa1350470:intergenic |
AAGGAGATAATAACCTCTAG+TGG | 0.521847 | tig0011531:-34522 | Msa1350470:intergenic |
AACGAGCTATTTAGAGTCAA+AGG | 0.523265 | tig0011531:+35758 | Msa1350470:three_prime_UTR |
GACCGCCCTTGCCGGAGGCG+CGG | 0.523444 | tig0011531:-30084 | Msa1350470:intergenic |
ATAGGTCTACCCGAGTCAAA+TGG | 0.524701 | tig0011531:+32671 | Msa1350470:intron |
CGATAAAGCGAGCCAGGAGC+AGG | 0.527327 | tig0011531:-30300 | Msa1350470:intergenic |
GGCAAGGGCGGTCCAAGGCG+GGG | 0.527384 | tig0011531:+30094 | Msa1350470:CDS |
TTCTCACCGGATGGGAAGGG+GGG | 0.529973 | tig0011531:-35560 | Msa1350470:intergenic |
AATAACCTCTAGTGGGGTGA+GGG | 0.529991 | tig0011531:-34514 | Msa1350470:intergenic |
CCTGGCCGAATCATACGTCC+TGG | 0.536052 | tig0011531:+34465 | Msa1350470:CDS |
GGACTACGATAAAGCGAGCC+AGG | 0.537123 | tig0011531:-30306 | Msa1350470:intergenic |
CACTGTTTGTCTTCATAGTG+AGG | 0.537308 | tig0011531:+35005 | Msa1350470:CDS |
CATCTCCGCAATCTCCGCTC+CGG | 0.541458 | tig0011531:+30058 | Msa1350470:CDS |
AATGTAGGTTCGTGAAGAAA+GGG | 0.541489 | tig0011531:-29839 | Msa1350470:intergenic |
CACCCTCCGGTGGAGGAGGG+AGG | 0.541793 | tig0011531:+30127 | Msa1350470:CDS |
CCAGGACGTATGATTCGGCC+AGG | 0.542297 | tig0011531:-34465 | Msa1350470:intergenic |
GACAACTGGAGGAGCATCAA+AGG | 0.544084 | tig0011531:-34077 | Msa1350470:intergenic |
GACCAAGAAAACGGTATGGC+AGG | 0.544400 | tig0011531:-35888 | Msa1350470:intergenic |
TCAGCAGCTTGATCTACTCA+TGG | 0.546339 | tig0011531:+35451 | Msa1350470:exon |
GGCGACCGGAGCGGAGATTG+CGG | 0.547340 | tig0011531:-30063 | Msa1350470:intergenic |
CTAGAATTATTCTTCCAGGA+TGG | 0.547657 | tig0011531:+34969 | Msa1350470:intron |
AGCGGAGATTGCGGAGATGA+CGG | 0.547840 | tig0011531:-30054 | Msa1350470:intergenic |
AAAACGACGAAGATGAAGAA+AGG | 0.548449 | tig0011531:-29910 | Msa1350470:intergenic |
ATCGTTGATCTGAAATGCAC+CGG | 0.553993 | tig0011531:+30007 | Msa1350470:exon |
GAGGTCACACAGTGATTCCA+AGG | 0.555464 | tig0011531:+35333 | Msa1350470:CDS |
ACTCCTCCCTCCTCCACCGG+AGG | 0.555622 | tig0011531:-30130 | Msa1350470:intergenic |
GGCCACAGAAGATACTTGTA+TGG | 0.556259 | tig0011531:+35072 | Msa1350470:CDS |
CCTTGGACCGCCCTTGCCGG+AGG | 0.556532 | tig0011531:-30089 | Msa1350470:intergenic |
AATCTTTCCATCAGGTACTC+AGG | 0.556689 | tig0011531:-33160 | Msa1350470:intergenic |
TTTGGGAGAGATTCCTGCAA+AGG | 0.557042 | tig0011531:-35687 | Msa1350470:intergenic |
TTGCTGCAAGAGAAAGAGGT+TGG | 0.559046 | tig0011531:+34424 | Msa1350470:CDS |
ATGGGGAAAGTTACCACCCT+GGG | 0.561543 | tig0011531:-35040 | Msa1350470:intergenic |
CAAGATTCCTGAGTACCTGA+TGG | 0.564832 | tig0011531:+33153 | Msa1350470:CDS |
GGAGACTCTGGCTTCTGAAG+AGG | 0.565018 | tig0011531:+34847 | Msa1350470:CDS |
TAATAACCTCTAGTGGGGTG+AGG | 0.566360 | tig0011531:-34515 | Msa1350470:intergenic |
CAAGAGAAAGAGGTTGGAAA+GGG | 0.566845 | tig0011531:+34430 | Msa1350470:CDS |
TATGCTTCTTTATATGGGAA+CGG | 0.567706 | tig0011531:+30242 | Msa1350470:CDS |
TGGATCAAATATCAAGGGAG+TGG | 0.568808 | tig0011531:+35616 | Msa1350470:three_prime_UTR |
AGGAGATAATAACCTCTAGT+GGG | 0.569111 | tig0011531:-34521 | Msa1350470:intergenic |
GTTTCCTAATTTGCATACGA+AGG | 0.569455 | tig0011531:+34826 | Msa1350470:CDS |
TCATACTTCACATAATGTAC+AGG | 0.570596 | tig0011531:-35807 | Msa1350470:intergenic |
TGAGGTGTTCGTCACAACCC+AGG | 0.571608 | tig0011531:+35023 | Msa1350470:CDS |
AATGTACAGGCAGGTTGTGA+AGG | 0.576376 | tig0011531:-35794 | Msa1350470:intergenic |
CGGCACATACATTCTGGACA+TGG | 0.576592 | tig0011531:-35397 | Msa1350470:intergenic |
GATGCCAATTCAGAACAGAA+TGG | 0.577445 | tig0011531:+35656 | Msa1350470:three_prime_UTR |
ATATATGTATCCATTTGACT+CGG | 0.577602 | tig0011531:-32681 | Msa1350470:intergenic |
GCAAGAGAAAGAGGTTGGAA+AGG | 0.580707 | tig0011531:+34429 | Msa1350470:CDS |
AATCGTCGGTTCTATTGGCA+CGG | 0.582762 | tig0011531:-35417 | Msa1350470:intergenic |
GAGGTGTTCGTCACAACCCA+GGG | 0.585782 | tig0011531:+35024 | Msa1350470:CDS |
AAAACGGTATGGCAGGACCC+TGG | 0.587529 | tig0011531:-35881 | Msa1350470:intergenic |
CTGAGGCGCTGGACAACTGG+AGG | 0.587571 | tig0011531:-34088 | Msa1350470:intergenic |
CCTGGAGCAATCAGGATCAA+CGG | 0.587903 | tig0011531:+34483 | Msa1350470:CDS |
GGAATTGGATCAAATATCAA+GGG | 0.590972 | tig0011531:+35611 | Msa1350470:three_prime_UTR |
TTCAGATTAGAATAAAGCTG+AGG | 0.595196 | tig0011531:-30327 | Msa1350470:intergenic |
AGCGTCAACTGCTGAACATG+AGG | 0.596425 | tig0011531:+35314 | Msa1350470:CDS |
ATATGGAGAAGTCCATATAG+AGG | 0.598207 | tig0011531:+31790 | Msa1350470:CDS |
CAGAAATGCACTCAGTGGCA+AGG | 0.599401 | tig0011531:-35516 | Msa1350470:intergenic |
TCCCATATAAAGAAGCATAC+CGG | 0.599861 | tig0011531:-30238 | Msa1350470:intergenic |
ATGCACCGGCTACCGAGCAG+CGG | 0.600065 | tig0011531:+30021 | Msa1350470:CDS |
AACAGACCAAGAAAACGGTA+TGG | 0.602079 | tig0011531:-35892 | Msa1350470:intergenic |
ACTTCACATAATGTACAGGC+AGG | 0.605489 | tig0011531:-35803 | Msa1350470:intergenic |
GAATAGTGAAATAGTTACAC+TGG | 0.605520 | tig0011531:-36063 | Msa1350470:intergenic |
ATGCACTCAGTGGCAAGGCA+TGG | 0.606594 | tig0011531:-35511 | Msa1350470:intergenic |
CAACTAGACCCTCAATGTGA+AGG | 0.608967 | tig0011531:-35968 | Msa1350470:intergenic |
TGGTGGGTATGCCTTCTCAC+CGG | 0.611274 | tig0011531:-35573 | Msa1350470:intergenic |
ACAATTTCAGGATCAAGGCA+TGG | 0.613833 | tig0011531:+33206 | Msa1350470:CDS |
CTGTACATTAACAAAATCCA+GGG | 0.614568 | tig0011531:+35864 | Msa1350470:three_prime_UTR |
GGTATGCCTTCTCACCGGAT+GGG | 0.614913 | tig0011531:-35568 | Msa1350470:intergenic |
GGCAAAGAAACAAACCGCAT+CGG | 0.616739 | tig0011531:-30379 | Msa1350470:intergenic |
CTCCTCCCTCCTCCACCGGA+GGG | 0.617309 | tig0011531:-30129 | Msa1350470:intergenic |
GCTCCGTTGATTTATATCGC+CGG | 0.620961 | tig0011531:+30219 | Msa1350470:CDS |
CTGTGGCCCAGCAGAAAATG+GGG | 0.623681 | tig0011531:-35057 | Msa1350470:intergenic |
ATAACCTCTAGTGGGGTGAG+GGG | 0.627238 | tig0011531:-34513 | Msa1350470:intergenic |
TATATGTATCCATTTGACTC+GGG | 0.632755 | tig0011531:-32680 | Msa1350470:intergenic |
CAGGTTGGCCTGATGCTGAG+GGG | 0.634157 | tig0011531:+34716 | Msa1350470:intron |
TAGATAGCCAGCCACAGCAA+CGG | 0.638707 | tig0011531:-32849 | Msa1350470:intergenic |
AAATGGATACATATATGTAG+AGG | 0.639855 | tig0011531:+32688 | Msa1350470:CDS |
ATATAATGCTGAGAAAACAA+TGG | 0.641862 | tig0011531:+34787 | Msa1350470:CDS |
AGACAATTAAGCCTGATAAG+CGG | 0.644283 | tig0011531:+35106 | Msa1350470:CDS |
CTTAAATCAGCAAAGGACAT+CGG | 0.644691 | tig0011531:+32721 | Msa1350470:CDS |
AATGGAAGTTTGGAATCACA+AGG | 0.644732 | tig0011531:-32880 | Msa1350470:intergenic |
ATGGTGGCTTAAATCAGCAA+AGG | 0.645601 | tig0011531:+32714 | Msa1350470:CDS |
TGTGTAAATAGATCTTCAGA+AGG | 0.646000 | tig0011531:+31829 | Msa1350470:CDS |
CACCATACAAGTATCTTCTG+TGG | 0.650588 | tig0011531:-35074 | Msa1350470:intergenic |
GAGCGTAGTGCCGTTAATGG+CGG | 0.653129 | tig0011531:+34190 | Msa1350470:CDS |
CATTCAGTATTATAGAGATG+TGG | 0.653828 | tig0011531:+33234 | Msa1350470:CDS |
GGATAACTCTTCTACCGATG+CGG | 0.654560 | tig0011531:+30365 | Msa1350470:CDS |
TCTGAAGATCTATTTACACA+TGG | 0.658128 | tig0011531:-31826 | Msa1350470:intergenic |
AAAGCGAGCCAGGAGCAGGA+CGG | 0.659359 | tig0011531:-30296 | Msa1350470:intergenic |
CACAGAAGATACTTGTATGG+TGG | 0.660172 | tig0011531:+35075 | Msa1350470:CDS |
GTGTCCCCTCACCCCACTAG+AGG | 0.664674 | tig0011531:+34509 | Msa1350470:CDS |
GGTATGCAATGCCGTTGCTG+TGG | 0.666009 | tig0011531:+32838 | Msa1350470:intron |
TGGAGAAGTCCATATAGAGG+TGG | 0.670438 | tig0011531:+31793 | Msa1350470:CDS |
GGAGATAATAACCTCTAGTG+GGG | 0.676659 | tig0011531:-34520 | Msa1350470:intergenic |
GAGGGAGGAGTTTAGCGCAG+AGG | 0.682139 | tig0011531:+30142 | Msa1350470:CDS |
CAGGTGCTTAGCAAATTACG+AGG | 0.687343 | tig0011531:+34108 | Msa1350470:CDS |
ATATATGTAGAGGCTAATGG+TGG | 0.688262 | tig0011531:+32698 | Msa1350470:CDS |
AGGTCACACAGTGATTCCAA+GGG | 0.690772 | tig0011531:+35334 | Msa1350470:CDS |
AATGGGGAAAGTTACCACCC+TGG | 0.694185 | tig0011531:-35041 | Msa1350470:intergenic |
TAAGAGTGGAAATAGCCAAG+AGG | 0.694553 | tig0011531:+36138 | Msa1350470:three_prime_UTR |
ATACCGGCGATATAAATCAA+CGG | 0.703205 | tig0011531:-30222 | Msa1350470:intergenic |
AGTATCAGAAATGCACTCAG+TGG | 0.721917 | tig0011531:-35521 | Msa1350470:intergenic |
ATGGAAGTTTGGAATCACAA+GGG | 0.724437 | tig0011531:-32879 | Msa1350470:intergenic |
GTATCATTGCTAAAACAATG+TGG | 0.733568 | tig0011531:-36041 | Msa1350470:intergenic |
GTGTTCGTCACAACCCAGGG+TGG | 0.740890 | tig0011531:+35027 | Msa1350470:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTAACTATTAATTTATATA+CGG | + | tig0011531:32637-32656 | Msa1350470:intron | 10.0% |
!! | GAAAGTAATAATAAATTAAA+GGG | - | tig0011531:35277-35296 | Msa1350470:intergenic | 10.0% |
!!! | TTTGATGATTTTTTAGTATT+TGG | + | tig0011531:30434-30453 | Msa1350470:intron | 15.0% |
!! | TGTTATTGTTATAATAAAGT+AGG | + | tig0011531:30782-30801 | Msa1350470:intron | 15.0% |
!!! | AATTTTCAACTTATAAAAAG+AGG | - | tig0011531:31228-31247 | Msa1350470:intergenic | 15.0% |
!!! | TTTTTATAAGTTGAAAATTC+AGG | + | tig0011531:31229-31248 | Msa1350470:intron | 15.0% |
!!! | TTCATACTTTTCTATTTTTA+TGG | + | tig0011531:31711-31730 | Msa1350470:intron | 15.0% |
!! | AAGTAATTAGTATATAAACT+TGG | - | tig0011531:32168-32187 | Msa1350470:intergenic | 15.0% |
!! | TATATACTAATTACTTCATT+TGG | + | tig0011531:32172-32191 | Msa1350470:intron | 15.0% |
!!! | TTTGTGCTTTTAATATTAAT+TGG | + | tig0011531:32980-32999 | Msa1350470:intron | 15.0% |
!! | GATATATAGATAAATCATTA+GGG | - | tig0011531:33522-33541 | Msa1350470:intergenic | 15.0% |
!! | CTAATGATTTATCTATATAT+CGG | + | tig0011531:33521-33540 | Msa1350470:intron | 15.0% |
!!! | TAATTAAATTTTATTCATGC+AGG | + | tig0011531:34020-34039 | Msa1350470:intron | 15.0% |
!!! | AATTAAATTTTATTCATGCA+GGG | + | tig0011531:34021-34040 | Msa1350470:intron | 15.0% |
!! | AAGAAAAGAAAGAAAAATTT+AGG | + | tig0011531:34569-34588 | Msa1350470:intron | 15.0% |
!! | GGAAAGTAATAATAAATTAA+AGG | - | tig0011531:35278-35297 | Msa1350470:intergenic | 15.0% |
!!! | TTTGTTATTCTTTTACATTA+TGG | + | tig0011531:36018-36037 | Msa1350470:three_prime_UTR | 15.0% |
!!! | TAATTTTTGATTGTGAATGT+AGG | - | tig0011531:29857-29876 | Msa0198410:intergenic | 20.0% |
!!! | AATTAAGCTTATGAAAGTTT+TGG | + | tig0011531:30511-30530 | Msa1350470:intron | 20.0% |
!!! | TATGAAAGTTTTGGATTTAT+AGG | + | tig0011531:30520-30539 | Msa1350470:intron | 20.0% |
!!! | AGGTTTGATTTCAATTATAT+TGG | + | tig0011531:30540-30559 | Msa1350470:intron | 20.0% |
!! | TTGTAGTCAAATAGTTTATT+AGG | + | tig0011531:30567-30586 | Msa1350470:intron | 20.0% |
!! | TATACAGATTGTTGAAATTT+GGG | - | tig0011531:30841-30860 | Msa1350470:intergenic | 20.0% |
!! | TTATACAGATTGTTGAAATT+TGG | - | tig0011531:30842-30861 | Msa1350470:intergenic | 20.0% |
!! | TCTGTATAAGAAAAATACAA+TGG | + | tig0011531:30853-30872 | Msa1350470:intron | 20.0% |
!! | AAATACAATGGTTATGTAAA+TGG | + | tig0011531:30865-30884 | Msa1350470:intron | 20.0% |
!! | TTGTATACAAAGAAAAATGA+AGG | - | tig0011531:31059-31078 | Msa1350470:intergenic | 20.0% |
!!! | TTCATTTTTCTTTGTATACA+AGG | + | tig0011531:31058-31077 | Msa1350470:intron | 20.0% |
!!! | TCATTTTTCTTTGTATACAA+GGG | + | tig0011531:31059-31078 | Msa1350470:intron | 20.0% |
!! | AAAAAAAAAAATTGCATGCT+TGG | - | tig0011531:31447-31466 | Msa1350470:intergenic | 20.0% |
!! | AAAGAAAATGTCATCATTTA+TGG | - | tig0011531:31877-31896 | Msa1350470:intergenic | 20.0% |
!! | TATCCAAAGGAAAAAAATAT+TGG | + | tig0011531:32448-32467 | Msa1350470:intron | 20.0% |
!! | ATCCAAAGGAAAAAAATATT+GGG | + | tig0011531:32449-32468 | Msa1350470:intron | 20.0% |
!!! | ACATAAAATCTTTTAGATGA+TGG | + | tig0011531:32472-32491 | Msa1350470:intron | 20.0% |
!!! | CATTATGTGTTTTCAAATAT+TGG | + | tig0011531:32759-32778 | Msa1350470:intron | 20.0% |
!! | ACATCATTCACAAAATAAAT+GGG | - | tig0011531:32807-32826 | Msa1350470:intergenic | 20.0% |
!! | TTAATAGTTAAAACAGTTTG+TGG | + | tig0011531:33333-33352 | Msa1350470:intron | 20.0% |
!! | CGATATATAGATAAATCATT+AGG | - | tig0011531:33523-33542 | Msa1350470:intergenic | 20.0% |
!!! | ATTATTTTAAGCTTCATCTA+AGG | + | tig0011531:33549-33568 | Msa1350470:intron | 20.0% |
!!! | TTATTTTAAGCTTCATCTAA+GGG | + | tig0011531:33550-33569 | Msa1350470:intron | 20.0% |
!!! | CTAAAATCGTTAAAGTTTTA+AGG | - | tig0011531:34544-34563 | Msa1350470:intergenic | 20.0% |
!! | AGTAATAATAAATTAAAGGG+AGG | - | tig0011531:35274-35293 | Msa1350470:intergenic | 20.0% |
!! | ATTTATTATTACTTTCCAGA+TGG | + | tig0011531:35281-35300 | Msa1350470:intron | 20.0% |
!! | AATGAAATGAATGTTTTGCA+AGG | - | tig0011531:29815-29834 | Msa0198410:intergenic | 25.0% |
!! | GCTTTATTCTAATCTGAAAA+AGG | + | tig0011531:30332-30351 | Msa1350470:CDS | 25.0% |
! | TTCTAATCTGAAAAAGGATA+TGG | + | tig0011531:30338-30357 | Msa1350470:CDS | 25.0% |
! | GAAAATACAGATTCGAAAAA+AGG | - | tig0011531:30403-30422 | Msa1350470:intergenic | 25.0% |
! | GTATTTGCTTATTCTGATTT+AGG | + | tig0011531:30481-30500 | Msa1350470:intron | 25.0% |
! | ATACAGATTGTTGAAATTTG+GGG | - | tig0011531:30840-30859 | Msa1350470:intergenic | 25.0% |
! | GAAGTGGGAATAAAAATATT+TGG | + | tig0011531:30998-31017 | Msa1350470:intron | 25.0% |
!!! | TTCAATAACTTTTTCTCCTA+CGG | - | tig0011531:31192-31211 | Msa1350470:intergenic | 25.0% |
!!! | ATTTTTCAGCTTCTTCTATA+AGG | + | tig0011531:31533-31552 | Msa1350470:intron | 25.0% |
! | TCTTTCAGATATCTACAATA+TGG | + | tig0011531:31773-31792 | Msa1350470:intron | 25.0% |
!! | TATAATTTTGTCGATGCTTT+TGG | + | tig0011531:32106-32125 | Msa1350470:intron | 25.0% |
! | TACTAATTACTTCATTTGGA+TGG | + | tig0011531:32176-32195 | Msa1350470:intron | 25.0% |
! | GAGAAGATAGAAAAATACTA+GGG | - | tig0011531:32407-32426 | Msa1350470:intergenic | 25.0% |
! | AGAGAAGATAGAAAAATACT+AGG | - | tig0011531:32408-32427 | Msa1350470:intergenic | 25.0% |
!! | AATTTCCTTTTTCTATCCAA+AGG | + | tig0011531:32435-32454 | Msa1350470:intron | 25.0% |
!! | TTTTTCCTTTGGATAGAAAA+AGG | - | tig0011531:32443-32462 | Msa1350470:intergenic | 25.0% |
!! | TTGCCATTTAATTTATGAAG+TGG | + | tig0011531:32502-32521 | Msa1350470:intron | 25.0% |
! | TAATAGTTAGTGAAACAAAG+TGG | - | tig0011531:32628-32647 | Msa1350470:intergenic | 25.0% |
! | ATATATGTATCCATTTGACT+CGG | - | tig0011531:32684-32703 | Msa1350470:intergenic | 25.0% |
! | AAATGGATACATATATGTAG+AGG | + | tig0011531:32688-32707 | Msa1350470:CDS | 25.0% |
! | GACATCATTCACAAAATAAA+TGG | - | tig0011531:32808-32827 | Msa1350470:intergenic | 25.0% |
!!! | ATACTATGATAATGGAAGTT+TGG | - | tig0011531:32893-32912 | Msa1350470:intergenic | 25.0% |
! | ACTTCCATTATCATAGTATA+TGG | + | tig0011531:32894-32913 | Msa1350470:CDS | 25.0% |
! | CTTTCCATATACTATGATAA+TGG | - | tig0011531:32901-32920 | Msa1350470:intergenic | 25.0% |
! | TTAATTGGTTATGTGTTTCT+TGG | + | tig0011531:32995-33014 | Msa1350470:intron | 25.0% |
! | GAAATATTATGGATCAGATT+GGG | - | tig0011531:33054-33073 | Msa1350470:intergenic | 25.0% |
! | TGAAATATTATGGATCAGAT+TGG | - | tig0011531:33055-33074 | Msa1350470:intergenic | 25.0% |
! | ACTGGAAATGTGAAATATTA+TGG | - | tig0011531:33065-33084 | Msa1350470:intergenic | 25.0% |
!! | ACTTTTCTTCAAGTAACTTT+GGG | - | tig0011531:33264-33283 | Msa1350470:intergenic | 25.0% |
!!! | ATGTTTGTTTTACTTTATCG+TGG | + | tig0011531:33293-33312 | Msa1350470:intron | 25.0% |
!!! | TGTTTGTTTTACTTTATCGT+GGG | + | tig0011531:33294-33313 | Msa1350470:intron | 25.0% |
! | AAAACGATACTTAAAAGGAA+TGG | - | tig0011531:33418-33437 | Msa1350470:intergenic | 25.0% |
! | CCAATAAAACGATACTTAAA+AGG | - | tig0011531:33423-33442 | Msa1350470:intergenic | 25.0% |
!!! | CCTTTTAAGTATCGTTTTAT+TGG | + | tig0011531:33420-33439 | Msa1350470:intron | 25.0% |
! | GATTTATCTATATATCGGAT+AGG | + | tig0011531:33526-33545 | Msa1350470:intron | 25.0% |
!!! | TATTTTAAGCTTCATCTAAG+GGG | + | tig0011531:33551-33570 | Msa1350470:intron | 25.0% |
! | AAATATCATTATTACCCCAT+CGG | + | tig0011531:33937-33956 | Msa1350470:intron | 25.0% |
!! | GTTTTCTTATCAAATATGCT+AGG | + | tig0011531:33970-33989 | Msa1350470:intron | 25.0% |
! | TTAGTCTAGCTAAAATTTCA+AGG | + | tig0011531:34618-34637 | Msa1350470:intron | 25.0% |
! | ATATAATGCTGAGAAAACAA+TGG | + | tig0011531:34787-34806 | Msa1350470:CDS | 25.0% |
!! | TCTTTGATAATCCCAATATA+GGG | + | tig0011531:35142-35161 | Msa1350470:CDS | 25.0% |
! | ATGATACATTACCCTATATT+GGG | - | tig0011531:35156-35175 | Msa1350470:intergenic | 25.0% |
! | AATGATACATTACCCTATAT+TGG | - | tig0011531:35157-35176 | Msa1350470:intergenic | 25.0% |
! | AGCTAATGTAAATTCAAACA+AGG | - | tig0011531:35198-35217 | Msa1350470:intergenic | 25.0% |
! | ATTCCTTTGATCTTCAAAAA+TGG | - | tig0011531:35596-35615 | Msa1350470:intergenic | 25.0% |
!!! | TTTTTGAAGATCAAAGGAAT+TGG | + | tig0011531:35596-35615 | Msa1350470:three_prime_UTR | 25.0% |
! | AGTATGATATTCATGTGTTA+AGG | + | tig0011531:35823-35842 | Msa1350470:three_prime_UTR | 25.0% |
! | CAAAATATGAAACTGATAAC+AGG | - | tig0011531:35944-35963 | Msa1350470:intergenic | 25.0% |
! | ATGAATGTTTTGCAAGGTTT+GGG | - | tig0011531:29809-29828 | Msa0198410:intergenic | 30.0% |
! | AATGAATGTTTTGCAAGGTT+TGG | - | tig0011531:29810-29829 | Msa0198410:intergenic | 30.0% |
TCTTTCTGTGTGTATCAAAA+CGG | - | tig0011531:29948-29967 | Msa0198410:intergenic | 30.0% | |
TATGCTTCTTTATATGGGAA+CGG | + | tig0011531:30242-30261 | Msa1350470:CDS | 30.0% | |
TTCAGATTAGAATAAAGCTG+AGG | - | tig0011531:30330-30349 | Msa1350470:intergenic | 30.0% | |
TCTGAAAAAGGATATGGATT+CGG | + | tig0011531:30344-30363 | Msa1350470:CDS | 30.0% | |
TTTATTAGGTCTGAATTCGA+TGG | + | tig0011531:30581-30600 | Msa1350470:intron | 30.0% | |
ATAATGTGTGTTAGTATCGT+AGG | + | tig0011531:30710-30729 | Msa1350470:intron | 30.0% | |
TAATGTGTGTTAGTATCGTA+GGG | + | tig0011531:30711-30730 | Msa1350470:intron | 30.0% | |
ACAATGGTTATGTAAATGGT+TGG | + | tig0011531:30869-30888 | Msa1350470:intron | 30.0% | |
GAATTGAAATTACTTGCTTG+TGG | + | tig0011531:30899-30918 | Msa1350470:intron | 30.0% | |
!!! | GTGTTTTCTAGCTTGTTATT+TGG | + | tig0011531:30974-30993 | Msa1350470:intron | 30.0% |
CAGTATTGTCATCATCAATA+TGG | + | tig0011531:31280-31299 | Msa1350470:intron | 30.0% | |
AATCACATTGAATTCACCTA+GGG | - | tig0011531:31361-31380 | Msa1350470:intergenic | 30.0% | |
!! | GTTTTGTTAACTCTGGAAAT+TGG | - | tig0011531:31396-31415 | Msa1350470:intergenic | 30.0% |
!! | TATGTGTGTTTTGTTAACTC+TGG | - | tig0011531:31403-31422 | Msa1350470:intergenic | 30.0% |
! | TTTATGTTTTTCTTGACTGC+TGG | + | tig0011531:31482-31501 | Msa1350470:intron | 30.0% |
TGAAGATATATGAAGTGCAA+TGG | - | tig0011531:31695-31714 | Msa1350470:intergenic | 30.0% | |
TCTGAAGATCTATTTACACA+TGG | - | tig0011531:31829-31848 | Msa1350470:intergenic | 30.0% | |
TGTGTAAATAGATCTTCAGA+AGG | + | tig0011531:31829-31848 | Msa1350470:CDS | 30.0% | |
!! | TACAAAGCGTTGTTAAATAG+CGG | + | tig0011531:31996-32015 | Msa1350470:intron | 30.0% |
!! | CCTTTAAAACAGAAAAGACT+AGG | - | tig0011531:32370-32389 | Msa1350470:intergenic | 30.0% |
!! | CCTAGTCTTTTCTGTTTTAA+AGG | + | tig0011531:32367-32386 | Msa1350470:intron | 30.0% |
!!! | GTCCCAATATTTTTTTCCTT+TGG | - | tig0011531:32454-32473 | Msa1350470:intergenic | 30.0% |
GGACCACTTCATAAATTAAA+TGG | - | tig0011531:32508-32527 | Msa1350470:intergenic | 30.0% | |
TATACGGTTGTATTGTTGAT+AGG | + | tig0011531:32653-32672 | Msa1350470:intron | 30.0% | |
TATATGTATCCATTTGACTC+GGG | - | tig0011531:32683-32702 | Msa1350470:intergenic | 30.0% | |
TACATATATGTAGAGGCTAA+TGG | + | tig0011531:32695-32714 | Msa1350470:CDS | 30.0% | |
TGAATGATGTCAATGCTTAT+AGG | + | tig0011531:32817-32836 | Msa1350470:intron | 30.0% | |
ATAGTATATGGAAAGATCCT+AGG | + | tig0011531:32906-32925 | Msa1350470:CDS | 30.0% | |
AAACTAAATAAACACCATCG+TGG | - | tig0011531:33024-33043 | Msa1350470:intergenic | 30.0% | |
TTCACATTTCCAGTAAATTC+AGG | + | tig0011531:33071-33090 | Msa1350470:intron | 30.0% | |
TCACATTTCCAGTAAATTCA+GGG | + | tig0011531:33072-33091 | Msa1350470:intron | 30.0% | |
ATATCCTGAAAAATGATGTG+CGG | + | tig0011531:33122-33141 | Msa1350470:CDS | 30.0% | |
TGACAAATGTTCACAATTTC+AGG | + | tig0011531:33194-33213 | Msa1350470:CDS | 30.0% | |
CACATCTCTATAATACTGAA+TGG | - | tig0011531:33236-33255 | Msa1350470:intergenic | 30.0% | |
CATTCAGTATTATAGAGATG+TGG | + | tig0011531:33234-33253 | Msa1350470:CDS | 30.0% | |
! | CACTTTTCTTCAAGTAACTT+TGG | - | tig0011531:33265-33284 | Msa1350470:intergenic | 30.0% |
TTAAAACAGTTTGTGGTGAT+TGG | + | tig0011531:33340-33359 | Msa1350470:intron | 30.0% | |
! | TTTCTTTCTTTTCCTAACCT+TGG | - | tig0011531:33373-33392 | Msa1350470:intergenic | 30.0% |
AAGGTTAGGAAAAGAAAGAA+AGG | + | tig0011531:33372-33391 | Msa1350470:intron | 30.0% | |
! | ATTTTAAGCTTCATCTAAGG+GGG | + | tig0011531:33552-33571 | Msa1350470:intron | 30.0% |
!! | TAAAATGTCATAAGAGCGTT+AGG | - | tig0011531:33652-33671 | Msa1350470:intergenic | 30.0% |
AAAACTCCTATTTATCCGAT+GGG | - | tig0011531:33955-33974 | Msa1350470:intergenic | 30.0% | |
AACATATTTACCGCCATTAA+CGG | - | tig0011531:34203-34222 | Msa1350470:intergenic | 30.0% | |
TTAATCTTTACTGCAACTGA+TGG | + | tig0011531:34317-34336 | Msa1350470:intron | 30.0% | |
!! | TTCTCCTGTTGTATTTTTGA+TGG | + | tig0011531:34375-34394 | Msa1350470:CDS | 30.0% |
GTAAATGCTTTCATTTCTTC+AGG | + | tig0011531:34697-34716 | Msa1350470:intron | 30.0% | |
! | GAAGAACACATCTATCTTTT+TGG | + | tig0011531:34751-34770 | Msa1350470:CDS | 30.0% |
TTAGGAAACATTTGTAGTAG+TGG | - | tig0011531:34815-34834 | Msa1350470:intergenic | 30.0% | |
AAGAGGAACTTTCTACATTT+AGG | + | tig0011531:34864-34883 | Msa1350470:CDS | 30.0% | |
AGAGGAACTTTCTACATTTA+GGG | + | tig0011531:34865-34884 | Msa1350470:CDS | 30.0% | |
!! | TGTTCTAGAATTATTCTTCC+AGG | + | tig0011531:34965-34984 | Msa1350470:intron | 30.0% |
! | CTCTTTGATAATCCCAATAT+AGG | + | tig0011531:35141-35160 | Msa1350470:CDS | 30.0% |
AAGCTGTATATAGAGTCATT+TGG | - | tig0011531:35376-35395 | Msa1350470:intergenic | 30.0% | |
! | TGATGAAGATTTTGAATCGT+CGG | - | tig0011531:35434-35453 | Msa1350470:intergenic | 30.0% |
ATCTACTCATGGAATTTGAT+TGG | + | tig0011531:35462-35481 | Msa1350470:exon | 30.0% | |
CTTTGATCTTCAAAAATGGT+GGG | - | tig0011531:35592-35611 | Msa1350470:intergenic | 30.0% | |
AGGAATTGGATCAAATATCA+AGG | + | tig0011531:35610-35629 | Msa1350470:three_prime_UTR | 30.0% | |
GGAATTGGATCAAATATCAA+GGG | + | tig0011531:35611-35630 | Msa1350470:three_prime_UTR | 30.0% | |
!! | TTTTCCATTCTGTTCTGAAT+TGG | - | tig0011531:35663-35682 | Msa1350470:intergenic | 30.0% |
TCATACTTCACATAATGTAC+AGG | - | tig0011531:35810-35829 | Msa1350470:intergenic | 30.0% | |
TCTGTACATTAACAAAATCC+AGG | + | tig0011531:35863-35882 | Msa1350470:three_prime_UTR | 30.0% | |
CTGTACATTAACAAAATCCA+GGG | + | tig0011531:35864-35883 | Msa1350470:three_prime_UTR | 30.0% | |
!!! | TTTTGTTTTCCTTCACATTG+AGG | + | tig0011531:35959-35978 | Msa1350470:three_prime_UTR | 30.0% |
!! | TTTGTTTTCCTTCACATTGA+GGG | + | tig0011531:35960-35979 | Msa1350470:three_prime_UTR | 30.0% |
GTATCATTGCTAAAACAATG+TGG | - | tig0011531:36044-36063 | Msa1350470:intergenic | 30.0% | |
GAATAGTGAAATAGTTACAC+TGG | - | tig0011531:36066-36085 | Msa1350470:intergenic | 30.0% | |
AGCAAAATTTCTCAATTGCT+TGG | - | tig0011531:36092-36111 | Msa1350470:intergenic | 30.0% | |
AATGTAGGTTCGTGAAGAAA+GGG | - | tig0011531:29842-29861 | Msa0198410:intergenic | 35.0% | |
AAAACGACGAAGATGAAGAA+AGG | - | tig0011531:29913-29932 | Msa0198410:intergenic | 35.0% | |
ATACCGGCGATATAAATCAA+CGG | - | tig0011531:30225-30244 | Msa1350470:intergenic | 35.0% | |
! | TCCCATATAAAGAAGCATAC+CGG | - | tig0011531:30241-30260 | Msa1350470:intergenic | 35.0% |
TGGTTATGTAAATGGTTGGT+TGG | + | tig0011531:30873-30892 | Msa1350470:intron | 35.0% | |
! | TATGTAAATGGTTGGTTGGA+TGG | + | tig0011531:30877-30896 | Msa1350470:intron | 35.0% |
GCTTACTATATTGGTATGTG+TGG | + | tig0011531:30923-30942 | Msa1350470:intron | 35.0% | |
!! | TAGCTTGTTATTTGGTGAAG+TGG | + | tig0011531:30982-31001 | Msa1350470:intron | 35.0% |
!! | AGCTTGTTATTTGGTGAAGT+GGG | + | tig0011531:30983-31002 | Msa1350470:intron | 35.0% |
AATATTTGGCCACATTCATG+CGG | + | tig0011531:31012-31031 | Msa1350470:intron | 35.0% | |
TGTGATTTGATTGGATAGGA+TGG | + | tig0011531:31096-31115 | Msa1350470:intron | 35.0% | |
GTGATTTGATTGGATAGGAT+GGG | + | tig0011531:31097-31116 | Msa1350470:intron | 35.0% | |
GAATCACATTGAATTCACCT+AGG | - | tig0011531:31362-31381 | Msa1350470:intergenic | 35.0% | |
ATATGGAGAAGTCCATATAG+AGG | + | tig0011531:31790-31809 | Msa1350470:CDS | 35.0% | |
CTCTCAATGTTGTCAAGTAA+CGG | + | tig0011531:31900-31919 | Msa1350470:intron | 35.0% | |
! | TAGCGGCTATTTCAACTTTA+TGG | + | tig0011531:32013-32032 | Msa1350470:intron | 35.0% |
! | TTGATTCGTCTATTCCTTGT+TGG | + | tig0011531:32134-32153 | Msa1350470:intron | 35.0% |
TGCTATACACATAAGTGTGA+GGG | - | tig0011531:32237-32256 | Msa1350470:intergenic | 35.0% | |
ATGCTATACACATAAGTGTG+AGG | - | tig0011531:32238-32257 | Msa1350470:intergenic | 35.0% | |
CTTATGTGTATAGCATCTCT+TGG | + | tig0011531:32242-32261 | Msa1350470:intron | 35.0% | |
GATAGAAAAATACTAGGGTG+AGG | - | tig0011531:32402-32421 | Msa1350470:intergenic | 35.0% | |
ATGAAGTGGTCCATTATTGT+CGG | + | tig0011531:32516-32535 | Msa1350470:intron | 35.0% | |
! | ATAAGGTATCCCGACAATAA+TGG | - | tig0011531:32529-32548 | Msa1350470:intergenic | 35.0% |
ACAGCATCAATTCATGCATA+AGG | - | tig0011531:32546-32565 | Msa1350470:intergenic | 35.0% | |
TATGCATGAATTGATGCTGT+TGG | + | tig0011531:32546-32565 | Msa1350470:intron | 35.0% | |
TAGTTAGTGAAACAAAGTGG+TGG | - | tig0011531:32625-32644 | Msa1350470:intergenic | 35.0% | |
ATATATGTAGAGGCTAATGG+TGG | + | tig0011531:32698-32717 | Msa1350470:CDS | 35.0% | |
CTTAAATCAGCAAAGGACAT+CGG | + | tig0011531:32721-32740 | Msa1350470:CDS | 35.0% | |
! | ATGGAAGTTTGGAATCACAA+GGG | - | tig0011531:32882-32901 | Msa1350470:intergenic | 35.0% |
! | AATGGAAGTTTGGAATCACA+AGG | - | tig0011531:32883-32902 | Msa1350470:intergenic | 35.0% |
TATATGGAAAGATCCTAGGT+TGG | + | tig0011531:32910-32929 | Msa1350470:intron | 35.0% | |
GTTCGTCTGAACTATATCTT+CGG | + | tig0011531:32932-32951 | Msa1350470:intron | 35.0% | |
TATCCTGAAAAATGATGTGC+GGG | + | tig0011531:33123-33142 | Msa1350470:CDS | 35.0% | |
TGTTCACAATTTCAGGATCA+AGG | + | tig0011531:33201-33220 | Msa1350470:CDS | 35.0% | |
CGATACTTAAAAGGAATGGT+TGG | - | tig0011531:33414-33433 | Msa1350470:intergenic | 35.0% | |
! | TCATATATACGTGTGCTGTT+TGG | + | tig0011531:33584-33603 | Msa1350470:intron | 35.0% |
!!! | ATTTTTAGCTCCAAGTGTGT+AGG | + | tig0011531:33700-33719 | Msa1350470:intron | 35.0% |
AACTGTATTTGCTTTCTTGC+TGG | + | tig0011531:33758-33777 | Msa1350470:intron | 35.0% | |
AGCCTTAATCATAACCAATG+TGG | + | tig0011531:33882-33901 | Msa1350470:intron | 35.0% | |
GCCTTAATCATAACCAATGT+GGG | + | tig0011531:33883-33902 | Msa1350470:intron | 35.0% | |
CCTTAATCATAACCAATGTG+GGG | + | tig0011531:33884-33903 | Msa1350470:intron | 35.0% | |
TATTACCCCATCGGATAAAT+AGG | + | tig0011531:33946-33965 | Msa1350470:intron | 35.0% | |
AAACTCCTATTTATCCGATG+GGG | - | tig0011531:33954-33973 | Msa1350470:intergenic | 35.0% | |
GAAAACTCCTATTTATCCGA+TGG | - | tig0011531:33956-33975 | Msa1350470:intergenic | 35.0% | |
TCTTATCAAATATGCTAGGC+TGG | + | tig0011531:33974-33993 | Msa1350470:intron | 35.0% | |
AAGGACAATCTATTCGCAAA+AGG | - | tig0011531:34061-34080 | Msa1350470:intergenic | 35.0% | |
TAGCAAATTACGAGGCTTTA+CGG | + | tig0011531:34116-34135 | Msa1350470:CDS | 35.0% | |
!!! | TCAAGACCTATTTTGACCAT+AGG | + | tig0011531:34142-34161 | Msa1350470:CDS | 35.0% |
GATTCACCTATGGTCAAAAT+AGG | - | tig0011531:34151-34170 | Msa1350470:intergenic | 35.0% | |
TTTGACCATAGGTGAATCTT+TGG | + | tig0011531:34153-34172 | Msa1350470:CDS | 35.0% | |
TTCAACCAAAGATTCACCTA+TGG | - | tig0011531:34161-34180 | Msa1350470:intergenic | 35.0% | |
!!! | TGTACATCTTCGTTTTGAAG+AGG | + | tig0011531:34225-34244 | Msa1350470:CDS | 35.0% |
!! | TCCTGTTGTATTTTTGATGG+TGG | + | tig0011531:34378-34397 | Msa1350470:CDS | 35.0% |
!! | CCTGTTGTATTTTTGATGGT+GGG | + | tig0011531:34379-34398 | Msa1350470:CDS | 35.0% |
!!! | TATTTTTGATGGTGGGAAAC+AGG | + | tig0011531:34386-34405 | Msa1350470:CDS | 35.0% |
AAAGGGAAATTTACAAAGCC+TGG | + | tig0011531:34447-34466 | Msa1350470:CDS | 35.0% | |
AGGAGATAATAACCTCTAGT+GGG | - | tig0011531:34524-34543 | Msa1350470:intergenic | 35.0% | |
AAGGAGATAATAACCTCTAG+TGG | - | tig0011531:34525-34544 | Msa1350470:intergenic | 35.0% | |
! | CACTCAACATTTGCTGAATA+AGG | - | tig0011531:34647-34666 | Msa1350470:intergenic | 35.0% |
ATGCTTTCATTTCTTCAGGT+TGG | + | tig0011531:34701-34720 | Msa1350470:intron | 35.0% | |
!! | ACATCTATCTTTTTGGCATC+TGG | + | tig0011531:34758-34777 | Msa1350470:CDS | 35.0% |
! | GTTTCCTAATTTGCATACGA+AGG | + | tig0011531:34826-34845 | Msa1350470:CDS | 35.0% |
GGGGACAAATAACATAACAT+GGG | - | tig0011531:34905-34924 | Msa1350470:intergenic | 35.0% | |
AGGGGACAAATAACATAACA+TGG | - | tig0011531:34906-34925 | Msa1350470:intergenic | 35.0% | |
CTAGAATTATTCTTCCAGGA+TGG | + | tig0011531:34969-34988 | Msa1350470:intron | 35.0% | |
AGACAATTAAGCCTGATAAG+CGG | + | tig0011531:35106-35125 | Msa1350470:CDS | 35.0% | |
!!! | TTTTGAATCGTCGGTTCTAT+TGG | - | tig0011531:35425-35444 | Msa1350470:intergenic | 35.0% |
CCTTTGATCTTCAAAAATGG+TGG | - | tig0011531:35593-35612 | Msa1350470:intergenic | 35.0% | |
!! | CCACCATTTTTGAAGATCAA+AGG | + | tig0011531:35590-35609 | Msa1350470:three_prime_UTR | 35.0% |
AATGGAAAATGTTCCTTTGC+AGG | + | tig0011531:35674-35693 | Msa1350470:three_prime_UTR | 35.0% | |
! | CATAGCTCACTCAATGTTTT+GGG | - | tig0011531:35707-35726 | Msa1350470:intergenic | 35.0% |
! | ACATAGCTCACTCAATGTTT+TGG | - | tig0011531:35708-35727 | Msa1350470:intergenic | 35.0% |
! | AACGAGCTATTTAGAGTCAA+AGG | + | tig0011531:35758-35777 | Msa1350470:three_prime_UTR | 35.0% |
CCTAAAACAGACCAAGAAAA+CGG | - | tig0011531:35900-35919 | Msa1350470:intergenic | 35.0% | |
GAAGAAACAGAGTTTAAGAG+TGG | + | tig0011531:36124-36143 | Msa1350470:three_prime_UTR | 35.0% | |
! | ATATTTTCACCAGTTCCTCT+TGG | - | tig0011531:36156-36175 | Msa1350470:intergenic | 35.0% |
GAATGTAGGTTCGTGAAGAA+AGG | - | tig0011531:29843-29862 | Msa0198410:intergenic | 40.0% | |
! | ATCGTTGATCTGAAATGCAC+CGG | + | tig0011531:30007-30026 | Msa1350470:exon | 40.0% |
GCCGGTATGCTTCTTTATAT+GGG | + | tig0011531:30237-30256 | Msa1350470:CDS | 40.0% | |
GCAGGACGGTGTTTAATAAT+CGG | - | tig0011531:30285-30304 | Msa1350470:intergenic | 40.0% | |
TGAATTCGATGGTGCAATGT+GGG | + | tig0011531:30592-30611 | Msa1350470:intron | 40.0% | |
GCTTGTGGTGCTTACTATAT+TGG | + | tig0011531:30914-30933 | Msa1350470:intron | 40.0% | |
ATTAACCTACCGCATGAATG+TGG | - | tig0011531:31024-31043 | Msa1350470:intergenic | 40.0% | |
GTAAGCCAGTGTGATTTGAT+TGG | + | tig0011531:31087-31106 | Msa1350470:intron | 40.0% | |
CCTATCCAATCAAATCACAC+TGG | - | tig0011531:31095-31114 | Msa1350470:intergenic | 40.0% | |
CCAGTGTGATTTGATTGGAT+AGG | + | tig0011531:31092-31111 | Msa1350470:intron | 40.0% | |
AGTGTGACATTGAGATTCGT+AGG | + | tig0011531:31123-31142 | Msa1350470:intron | 40.0% | |
GTGTGACATTGAGATTCGTA+GGG | + | tig0011531:31124-31143 | Msa1350470:intron | 40.0% | |
TTCTTCCAACAAGCATGTGT+TGG | + | tig0011531:31307-31326 | Msa1350470:intron | 40.0% | |
TTTGACCATCGAATAATCGC+TGG | + | tig0011531:31589-31608 | Msa1350470:intron | 40.0% | |
TATCTCCAGCGATTATTCGA+TGG | - | tig0011531:31597-31616 | Msa1350470:intergenic | 40.0% | |
TTCCATTCACCACCTCTATA+TGG | - | tig0011531:31805-31824 | Msa1350470:intergenic | 40.0% | |
TATGCTGTAGTGCTATAGCA+CGG | - | tig0011531:31932-31951 | Msa1350470:intergenic | 40.0% | |
! | TAGAGCAACTTGTTCAAACG+TGG | - | tig0011531:32084-32103 | Msa1350470:intergenic | 40.0% |
ACTTGGTCAATCTACCAACA+AGG | - | tig0011531:32151-32170 | Msa1350470:intergenic | 40.0% | |
TGAAGTGGTCCATTATTGTC+GGG | + | tig0011531:32517-32536 | Msa1350470:intron | 40.0% | |
ATGGTGGCTTAAATCAGCAA+AGG | + | tig0011531:32714-32733 | Msa1350470:CDS | 40.0% | |
GTCTGAACTATATCTTCGGA+TGG | + | tig0011531:32936-32955 | Msa1350470:intron | 40.0% | |
GTAGATGTCCCTGAATTTAC+TGG | - | tig0011531:33083-33102 | Msa1350470:intergenic | 40.0% | |
AATCTTTCCATCAGGTACTC+AGG | - | tig0011531:33163-33182 | Msa1350470:intergenic | 40.0% | |
GAGTACCTGATGGAAAGATT+TGG | + | tig0011531:33163-33182 | Msa1350470:CDS | 40.0% | |
ACAATTTCAGGATCAAGGCA+TGG | + | tig0011531:33206-33225 | Msa1350470:CDS | 40.0% | |
ATTGGTACTTGTCCAAGGTT+AGG | + | tig0011531:33358-33377 | Msa1350470:intron | 40.0% | |
GTTTAGCAGATACAGCAACA+TGG | - | tig0011531:33622-33641 | Msa1350470:intergenic | 40.0% | |
ACAATAGCACATCAGAAGAG+TGG | + | tig0011531:33818-33837 | Msa1350470:intron | 40.0% | |
ACATCAGAAGAGTGGTCAAT+TGG | + | tig0011531:33826-33845 | Msa1350470:intron | 40.0% | |
CATCAGAAGAGTGGTCAATT+GGG | + | tig0011531:33827-33846 | Msa1350470:intron | 40.0% | |
GTTATGATTAAGGCTCGATG+TGG | - | tig0011531:33877-33896 | Msa1350470:intergenic | 40.0% | |
! | CCCCACATTGGTTATGATTA+AGG | - | tig0011531:33887-33906 | Msa1350470:intergenic | 40.0% |
!!! | CATCTTCGTTTTGAAGAGGT+TGG | + | tig0011531:34229-34248 | Msa1350470:intron | 40.0% |
CCCACCATCAAAAATACAAC+AGG | - | tig0011531:34382-34401 | Msa1350470:intergenic | 40.0% | |
ATGATTGCTGCAAGAGAAAG+AGG | + | tig0011531:34420-34439 | Msa1350470:CDS | 40.0% | |
CAAGAGAAAGAGGTTGGAAA+GGG | + | tig0011531:34430-34449 | Msa1350470:CDS | 40.0% | |
GGAGATAATAACCTCTAGTG+GGG | - | tig0011531:34523-34542 | Msa1350470:intergenic | 40.0% | |
GTCTCCTTCGTATGCAAATT+AGG | - | tig0011531:34833-34852 | Msa1350470:intergenic | 40.0% | |
! | TTATGTTATTTGTCCCCTCC+AGG | + | tig0011531:34908-34927 | Msa1350470:intron | 40.0% |
CACTGTTTGTCTTCATAGTG+AGG | + | tig0011531:35005-35024 | Msa1350470:CDS | 40.0% | |
! | TAACTTTCCCCATTTTCTGC+TGG | + | tig0011531:35050-35069 | Msa1350470:CDS | 40.0% |
! | AACTTTCCCCATTTTCTGCT+GGG | + | tig0011531:35051-35070 | Msa1350470:CDS | 40.0% |
CACCATACAAGTATCTTCTG+TGG | - | tig0011531:35077-35096 | Msa1350470:intergenic | 40.0% | |
CACAGAAGATACTTGTATGG+TGG | + | tig0011531:35075-35094 | Msa1350470:CDS | 40.0% | |
AATGCTAACTTCCGCTTATC+AGG | - | tig0011531:35120-35139 | Msa1350470:intergenic | 40.0% | |
AGGCATGGTCACAAAATCAT+AGG | - | tig0011531:35499-35518 | Msa1350470:intergenic | 40.0% | |
AGTATCAGAAATGCACTCAG+TGG | - | tig0011531:35524-35543 | Msa1350470:intergenic | 40.0% | |
TGGATCAAATATCAAGGGAG+TGG | + | tig0011531:35616-35635 | Msa1350470:three_prime_UTR | 40.0% | |
GATGCCAATTCAGAACAGAA+TGG | + | tig0011531:35656-35675 | Msa1350470:three_prime_UTR | 40.0% | |
ACTTCACATAATGTACAGGC+AGG | - | tig0011531:35806-35825 | Msa1350470:intergenic | 40.0% | |
AACAGACCAAGAAAACGGTA+TGG | - | tig0011531:35895-35914 | Msa1350470:intergenic | 40.0% | |
! | CCGTTTTCTTGGTCTGTTTT+AGG | + | tig0011531:35897-35916 | Msa1350470:three_prime_UTR | 40.0% |
TAAGAGTGGAAATAGCCAAG+AGG | + | tig0011531:36138-36157 | Msa1350470:three_prime_UTR | 40.0% | |
TGAAGAAAATTTCCCCGCCT+TGG | - | tig0011531:30109-30128 | Msa1350470:intergenic | 45.0% | |
! | GGGAAATTTTCTTCACCCTC+CGG | + | tig0011531:30114-30133 | Msa1350470:CDS | 45.0% |
! | AAATTTTCTTCACCCTCCGG+TGG | + | tig0011531:30117-30136 | Msa1350470:CDS | 45.0% |
ACAGAAAAATCCCTTGTCGC+CGG | - | tig0011531:30197-30216 | Msa1350470:intergenic | 45.0% | |
!! | GCTCCGTTGATTTATATCGC+CGG | + | tig0011531:30219-30238 | Msa1350470:CDS | 45.0% |
CGCCGGTATGCTTCTTTATA+TGG | + | tig0011531:30236-30255 | Msa1350470:CDS | 45.0% | |
GGATAACTCTTCTACCGATG+CGG | + | tig0011531:30365-30384 | Msa1350470:CDS | 45.0% | |
GGCAAAGAAACAAACCGCAT+CGG | - | tig0011531:30382-30401 | Msa1350470:intergenic | 45.0% | |
CTGAATTCGATGGTGCAATG+TGG | + | tig0011531:30591-30610 | Msa1350470:intron | 45.0% | |
! | CGAGTCTGCTCATTGATTGT+AGG | + | tig0011531:30755-30774 | Msa1350470:intron | 45.0% |
AGGGTATGAAACCTGACAAG+AGG | + | tig0011531:31143-31162 | Msa1350470:intron | 45.0% | |
CCAATCCAACACATGCTTGT+TGG | - | tig0011531:31315-31334 | Msa1350470:intergenic | 45.0% | |
CCAACAAGCATGTGTTGGAT+TGG | + | tig0011531:31312-31331 | Msa1350470:intron | 45.0% | |
TGGAGAAGTCCATATAGAGG+TGG | + | tig0011531:31793-31812 | Msa1350470:CDS | 45.0% | |
GTCCATATAGAGGTGGTGAA+TGG | + | tig0011531:31800-31819 | Msa1350470:CDS | 45.0% | |
GCTATAGCACTACAGCATAG+CGG | + | tig0011531:31933-31952 | Msa1350470:intron | 45.0% | |
CACATAAGTGTGAGGGCAAA+GGG | - | tig0011531:32230-32249 | Msa1350470:intergenic | 45.0% | |
ACACATAAGTGTGAGGGCAA+AGG | - | tig0011531:32231-32250 | Msa1350470:intergenic | 45.0% | |
GCTGCACAATCTCTATACGT+CGG | - | tig0011531:32308-32327 | Msa1350470:intergenic | 45.0% | |
ATAGGTCTACCCGAGTCAAA+TGG | + | tig0011531:32671-32690 | Msa1350470:intron | 45.0% | |
TAGTTCAGACGAACCAACCT+AGG | - | tig0011531:32926-32945 | Msa1350470:intergenic | 45.0% | |
GTGTTTCTTGGTATCCACGA+TGG | + | tig0011531:33007-33026 | Msa1350470:intron | 45.0% | |
CAAGATTCCTGAGTACCTGA+TGG | + | tig0011531:33153-33172 | Msa1350470:CDS | 45.0% | |
TGCTGCCAAATCTTTCCATC+AGG | - | tig0011531:33171-33190 | Msa1350470:intergenic | 45.0% | |
TGGTGATTGGTACTTGTCCA+AGG | + | tig0011531:33353-33372 | Msa1350470:intron | 45.0% | |
CAAGTGTGTAGGCAACACAA+CGG | + | tig0011531:33711-33730 | Msa1350470:intron | 45.0% | |
AGAAGAGTGGTCAATTGGGA+GGG | + | tig0011531:33831-33850 | Msa1350470:intron | 45.0% | |
TATCTGTCATGTCCCCACAT+TGG | - | tig0011531:33899-33918 | Msa1350470:intergenic | 45.0% | |
!! | CGTAATTTGCTAAGCACCTG+AGG | - | tig0011531:34108-34127 | Msa1350470:intergenic | 45.0% |
CAGGTGCTTAGCAAATTACG+AGG | + | tig0011531:34108-34127 | Msa1350470:CDS | 45.0% | |
AAGCAACCATATCCTGTGCA+TGG | - | tig0011531:34356-34375 | Msa1350470:intergenic | 45.0% | |
TTGCTGCAAGAGAAAGAGGT+TGG | + | tig0011531:34424-34443 | Msa1350470:CDS | 45.0% | |
GCAAGAGAAAGAGGTTGGAA+AGG | + | tig0011531:34429-34448 | Msa1350470:CDS | 45.0% | |
TTGCTCCAGGACGTATGATT+CGG | - | tig0011531:34473-34492 | Msa1350470:intergenic | 45.0% | |
AATAACCTCTAGTGGGGTGA+GGG | - | tig0011531:34517-34536 | Msa1350470:intergenic | 45.0% | |
TAATAACCTCTAGTGGGGTG+AGG | - | tig0011531:34518-34537 | Msa1350470:intergenic | 45.0% | |
TTTGCATACGAAGGAGACTC+TGG | + | tig0011531:34835-34854 | Msa1350470:CDS | 45.0% | |
ATAGAACTACCAGTCCTGGA+GGG | - | tig0011531:34925-34944 | Msa1350470:intergenic | 45.0% | |
AACCATAGAACTACCAGTCC+TGG | - | tig0011531:34929-34948 | Msa1350470:intergenic | 45.0% | |
GTAATCTATAGCAGCCATCC+TGG | - | tig0011531:34986-35005 | Msa1350470:intergenic | 45.0% | |
GGCCACAGAAGATACTTGTA+TGG | + | tig0011531:35072-35091 | Msa1350470:CDS | 45.0% | |
ACGCTTGAAACTTCTCCATC+TGG | - | tig0011531:35299-35318 | Msa1350470:intergenic | 45.0% | |
AGGTCACACAGTGATTCCAA+GGG | + | tig0011531:35334-35353 | Msa1350470:CDS | 45.0% | |
! | TCTTTTCAGCTCAACTCCCT+TGG | - | tig0011531:35353-35372 | Msa1350470:intergenic | 45.0% |
!! | AATCGTCGGTTCTATTGGCA+CGG | - | tig0011531:35420-35439 | Msa1350470:intergenic | 45.0% |
TCAGCAGCTTGATCTACTCA+TGG | + | tig0011531:35451-35470 | Msa1350470:exon | 45.0% | |
TTTGGGAGAGATTCCTGCAA+AGG | - | tig0011531:35690-35709 | Msa1350470:intergenic | 45.0% | |
AATGTACAGGCAGGTTGTGA+AGG | - | tig0011531:35797-35816 | Msa1350470:intergenic | 45.0% | |
CAACTAGACCCTCAATGTGA+AGG | - | tig0011531:35971-35990 | Msa1350470:intergenic | 45.0% | |
TGGAAATAGCCAAGAGGAAC+TGG | + | tig0011531:36144-36163 | Msa1350470:three_prime_UTR | 45.0% | |
!! | GCTGAGTTGGATGCTGCTTT+CGG | + | tig0011531:30164-30183 | Msa1350470:CDS | 50.0% |
ATTAAACACCGTCCTGCTCC+TGG | + | tig0011531:30288-30307 | Msa1350470:CDS | 50.0% | |
TTTGGCCACATTCATGCGGT+AGG | + | tig0011531:31016-31035 | Msa1350470:intron | 50.0% | |
!! | GAAACCTGACAAGAGGTGCT+TGG | + | tig0011531:31150-31169 | Msa1350470:intron | 50.0% |
CTTACCAAGCACCTCTTGTC+AGG | - | tig0011531:31157-31176 | Msa1350470:intergenic | 50.0% | |
!! | CTGACAAGAGGTGCTTGGTA+AGG | + | tig0011531:31155-31174 | Msa1350470:intron | 50.0% |
! | GAGGTGCTTGGTAAGGAAGT+CGG | + | tig0011531:31162-31181 | Msa1350470:intron | 50.0% |
AGGTGCTTGGTAAGGAAGTC+GGG | + | tig0011531:31163-31182 | Msa1350470:intron | 50.0% | |
CCTAGGGACGAGAGAATACA+AGG | - | tig0011531:31345-31364 | Msa1350470:intergenic | 50.0% | |
CCTTGTATTCTCTCGTCCCT+AGG | + | tig0011531:31342-31361 | Msa1350470:intron | 50.0% | |
CGCACACACAGACACATGAT+TGG | - | tig0011531:31627-31646 | Msa1350470:intergenic | 50.0% | |
TACGTCGGTATGACTCAGCA+AGG | - | tig0011531:32293-32312 | Msa1350470:intergenic | 50.0% | |
TAGATAGCCAGCCACAGCAA+CGG | - | tig0011531:32852-32871 | Msa1350470:intergenic | 50.0% | |
!! | CCACCCGCACATCATTTTTC+AGG | - | tig0011531:33129-33148 | Msa1350470:intergenic | 50.0% |
CCTGAAAAATGATGTGCGGG+TGG | + | tig0011531:33126-33145 | Msa1350470:CDS | 50.0% | |
!! | ATACGTGTGCTGTTTGGAGC+TGG | + | tig0011531:33590-33609 | Msa1350470:intron | 50.0% |
CGTTGTGTTGCCTACACACT+TGG | - | tig0011531:33713-33732 | Msa1350470:intergenic | 50.0% | |
CAGAAGAGTGGTCAATTGGG+AGG | + | tig0011531:33830-33849 | Msa1350470:intron | 50.0% | |
GGCTCGATGTGGTACTTAAG+TGG | - | tig0011531:33866-33885 | Msa1350470:intergenic | 50.0% | |
!! | GACAACTGGAGGAGCATCAA+AGG | - | tig0011531:34080-34099 | Msa1350470:intergenic | 50.0% |
! | AGAGAGCGTAGTGCCGTTAA+TGG | + | tig0011531:34187-34206 | Msa1350470:CDS | 50.0% |
ATACACTGCTCTCCATGCAC+AGG | + | tig0011531:34341-34360 | Msa1350470:intron | 50.0% | |
TGCTCTCCATGCACAGGATA+TGG | + | tig0011531:34347-34366 | Msa1350470:intron | 50.0% | |
TCATACGTCCTGGAGCAATC+AGG | + | tig0011531:34475-34494 | Msa1350470:CDS | 50.0% | |
CCTGGAGCAATCAGGATCAA+CGG | + | tig0011531:34483-34502 | Msa1350470:CDS | 50.0% | |
CTGGAGCAATCAGGATCAAC+GGG | + | tig0011531:34484-34503 | Msa1350470:CDS | 50.0% | |
ATAACCTCTAGTGGGGTGAG+GGG | - | tig0011531:34516-34535 | Msa1350470:intergenic | 50.0% | |
TTATTTGTCCCCTCCAGGAC+TGG | + | tig0011531:34913-34932 | Msa1350470:intron | 50.0% | |
TAGAACTACCAGTCCTGGAG+GGG | - | tig0011531:34924-34943 | Msa1350470:intergenic | 50.0% | |
CATAGAACTACCAGTCCTGG+AGG | - | tig0011531:34926-34945 | Msa1350470:intergenic | 50.0% | |
! | CTCCAGGACTGGTAGTTCTA+TGG | + | tig0011531:34924-34943 | Msa1350470:intron | 50.0% |
ATGGGGAAAGTTACCACCCT+GGG | - | tig0011531:35043-35062 | Msa1350470:intergenic | 50.0% | |
AATGGGGAAAGTTACCACCC+TGG | - | tig0011531:35044-35063 | Msa1350470:intergenic | 50.0% | |
TCTGTGGCCCAGCAGAAAAT+GGG | - | tig0011531:35061-35080 | Msa1350470:intergenic | 50.0% | |
TTCTGTGGCCCAGCAGAAAA+TGG | - | tig0011531:35062-35081 | Msa1350470:intergenic | 50.0% | |
AGCGTCAACTGCTGAACATG+AGG | + | tig0011531:35314-35333 | Msa1350470:CDS | 50.0% | |
GAGGTCACACAGTGATTCCA+AGG | + | tig0011531:35333-35352 | Msa1350470:CDS | 50.0% | |
CGGCACATACATTCTGGACA+TGG | - | tig0011531:35400-35419 | Msa1350470:intergenic | 50.0% | |
TTGGCACGGCACATACATTC+TGG | - | tig0011531:35406-35425 | Msa1350470:intergenic | 50.0% | |
CAGAAATGCACTCAGTGGCA+AGG | - | tig0011531:35519-35538 | Msa1350470:intergenic | 50.0% | |
! | TATTTTCCCCCCTTCCCATC+CGG | + | tig0011531:35554-35573 | Msa1350470:three_prime_UTR | 50.0% |
! | GTCCTGCCATACCGTTTTCT+TGG | + | tig0011531:35886-35905 | Msa1350470:three_prime_UTR | 50.0% |
GACCAAGAAAACGGTATGGC+AGG | - | tig0011531:35891-35910 | Msa1350470:intergenic | 50.0% | |
AGCGGAGATTGCGGAGATGA+CGG | - | tig0011531:30057-30076 | Msa1350470:intergenic | 55.0% | |
! | TTTTCTTCACCCTCCGGTGG+AGG | + | tig0011531:30120-30139 | Msa1350470:CDS | 55.0% |
TAAACTCCTCCCTCCTCCAC+CGG | - | tig0011531:30136-30155 | Msa1350470:intergenic | 55.0% | |
GTTTAGCGCAGAGGCTGAGT+TGG | + | tig0011531:30151-30170 | Msa1350470:CDS | 55.0% | |
!! | TGCTGCTTTCGGTGCTTCTC+CGG | + | tig0011531:30175-30194 | Msa1350470:CDS | 55.0% |
GGACTACGATAAAGCGAGCC+AGG | - | tig0011531:30309-30328 | Msa1350470:intergenic | 55.0% | |
TAAGGAAGTCGGGTGTCCGT+AGG | + | tig0011531:31173-31192 | Msa1350470:intron | 55.0% | |
GGTATGCAATGCCGTTGCTG+TGG | + | tig0011531:32838-32857 | Msa1350470:intron | 55.0% | |
! | GAGCGTAGTGCCGTTAATGG+CGG | + | tig0011531:34190-34209 | Msa1350470:CDS | 55.0% |
CCGTTGATCCTGATTGCTCC+AGG | - | tig0011531:34486-34505 | Msa1350470:intergenic | 55.0% | |
!! | TTCAGGTTGGCCTGATGCTG+AGG | + | tig0011531:34714-34733 | Msa1350470:intron | 55.0% |
!! | TCAGGTTGGCCTGATGCTGA+GGG | + | tig0011531:34715-34734 | Msa1350470:intron | 55.0% |
AACCCATTCCCCTCAGCATC+AGG | - | tig0011531:34727-34746 | Msa1350470:intergenic | 55.0% | |
! | GGAGACTCTGGCTTCTGAAG+AGG | + | tig0011531:34847-34866 | Msa1350470:CDS | 55.0% |
! | TGAGGTGTTCGTCACAACCC+AGG | + | tig0011531:35023-35042 | Msa1350470:CDS | 55.0% |
! | GAGGTGTTCGTCACAACCCA+GGG | + | tig0011531:35024-35043 | Msa1350470:CDS | 55.0% |
CTGTGGCCCAGCAGAAAATG+GGG | - | tig0011531:35060-35079 | Msa1350470:intergenic | 55.0% | |
ATGCACTCAGTGGCAAGGCA+TGG | - | tig0011531:35514-35533 | Msa1350470:intergenic | 55.0% | |
GGTATGCCTTCTCACCGGAT+GGG | - | tig0011531:35571-35590 | Msa1350470:intergenic | 55.0% | |
! | TGGTGGGTATGCCTTCTCAC+CGG | - | tig0011531:35576-35595 | Msa1350470:intergenic | 55.0% |
AAAACGGTATGGCAGGACCC+TGG | - | tig0011531:35884-35903 | Msa1350470:intergenic | 55.0% | |
CATCTCCGCAATCTCCGCTC+CGG | + | tig0011531:30058-30077 | Msa1350470:CDS | 60.0% | |
GAGGGAGGAGTTTAGCGCAG+AGG | + | tig0011531:30142-30161 | Msa1350470:CDS | 60.0% | |
AAAGCGAGCCAGGAGCAGGA+CGG | - | tig0011531:30299-30318 | Msa1350470:intergenic | 60.0% | |
CGATAAAGCGAGCCAGGAGC+AGG | - | tig0011531:30303-30322 | Msa1350470:intergenic | 60.0% | |
TGCAATGCCGTTGCTGTGGC+TGG | + | tig0011531:32842-32861 | Msa1350470:CDS | 60.0% | |
TTGCTAAGCACCTGAGGCGC+TGG | - | tig0011531:34102-34121 | Msa1350470:intergenic | 60.0% | |
! | CCAGGACGTATGATTCGGCC+AGG | - | tig0011531:34468-34487 | Msa1350470:intergenic | 60.0% |
CCTGGCCGAATCATACGTCC+TGG | + | tig0011531:34465-34484 | Msa1350470:CDS | 60.0% | |
!! | CAGGTTGGCCTGATGCTGAG+GGG | + | tig0011531:34716-34735 | Msa1350470:intron | 60.0% |
TGGCCTGATGCTGAGGGGAA+TGG | + | tig0011531:34721-34740 | Msa1350470:CDS | 60.0% | |
GGCCTGATGCTGAGGGGAAT+GGG | + | tig0011531:34722-34741 | Msa1350470:CDS | 60.0% | |
GTGTTCGTCACAACCCAGGG+TGG | + | tig0011531:35027-35046 | Msa1350470:CDS | 60.0% | |
TTCTCACCGGATGGGAAGGG+GGG | - | tig0011531:35563-35582 | Msa1350470:intergenic | 60.0% | |
CTTCTCACCGGATGGGAAGG+GGG | - | tig0011531:35564-35583 | Msa1350470:intergenic | 60.0% | |
CCTTCTCACCGGATGGGAAG+GGG | - | tig0011531:35565-35584 | Msa1350470:intergenic | 60.0% | |
GCCTTCTCACCGGATGGGAA+GGG | - | tig0011531:35566-35585 | Msa1350470:intergenic | 60.0% | |
TGCCTTCTCACCGGATGGGA+AGG | - | tig0011531:35567-35586 | Msa1350470:intergenic | 60.0% | |
GGGTATGCCTTCTCACCGGA+TGG | - | tig0011531:35572-35591 | Msa1350470:intergenic | 60.0% | |
!! | ATGCACCGGCTACCGAGCAG+CGG | + | tig0011531:30021-30040 | Msa1350470:CDS | 65.0% |
AATGCCCGCTGCTCGGTAGC+CGG | - | tig0011531:30029-30048 | Msa1350470:intergenic | 65.0% | |
TCTTCACCCTCCGGTGGAGG+AGG | + | tig0011531:30123-30142 | Msa1350470:CDS | 65.0% | |
CTTCACCCTCCGGTGGAGGA+GGG | + | tig0011531:30124-30143 | Msa1350470:CDS | 65.0% | |
! | TCGGTGCTTCTCCGGCGACA+AGG | + | tig0011531:30183-30202 | Msa1350470:CDS | 65.0% |
CGGTGCTTCTCCGGCGACAA+GGG | + | tig0011531:30184-30203 | Msa1350470:CDS | 65.0% | |
!! | CTGAGGCGCTGGACAACTGG+AGG | - | tig0011531:34091-34110 | Msa1350470:intergenic | 65.0% |
CTCCAGTTGTCCAGCGCCTC+AGG | + | tig0011531:34089-34108 | Msa1350470:CDS | 65.0% | |
!! | CACCTGAGGCGCTGGACAAC+TGG | - | tig0011531:34094-34113 | Msa1350470:intergenic | 65.0% |
GTGTCCCCTCACCCCACTAG+AGG | + | tig0011531:34509-34528 | Msa1350470:CDS | 65.0% | |
CCCCTTCCCATCCGGTGAGA+AGG | + | tig0011531:35562-35581 | Msa1350470:three_prime_UTR | 65.0% | |
!! | TGCACCGGCTACCGAGCAGC+GGG | + | tig0011531:30022-30041 | Msa1350470:CDS | 70.0% |
! | GGCGTCGAATGCCCGCTGCT+CGG | - | tig0011531:30036-30055 | Msa1350470:intergenic | 70.0% |
GGCGACCGGAGCGGAGATTG+CGG | - | tig0011531:30066-30085 | Msa1350470:intergenic | 70.0% | |
CTCCTCCCTCCTCCACCGGA+GGG | - | tig0011531:30132-30151 | Msa1350470:intergenic | 70.0% | |
ACTCCTCCCTCCTCCACCGG+AGG | - | tig0011531:30133-30152 | Msa1350470:intergenic | 70.0% | |
CCTTGGACCGCCCTTGCCGG+AGG | - | tig0011531:30092-30111 | Msa1350470:intergenic | 75.0% | |
CCTCCGGCAAGGGCGGTCCA+AGG | + | tig0011531:30089-30108 | Msa1350470:CDS | 75.0% | |
CCGCCTTGGACCGCCCTTGC+CGG | - | tig0011531:30095-30114 | Msa1350470:intergenic | 75.0% | |
CCGGCAAGGGCGGTCCAAGG+CGG | + | tig0011531:30092-30111 | Msa1350470:CDS | 75.0% | |
CGGCAAGGGCGGTCCAAGGC+GGG | + | tig0011531:30093-30112 | Msa1350470:CDS | 75.0% | |
GGCAAGGGCGGTCCAAGGCG+GGG | + | tig0011531:30094-30113 | Msa1350470:CDS | 75.0% | |
CACCCTCCGGTGGAGGAGGG+AGG | + | tig0011531:30127-30146 | Msa1350470:CDS | 75.0% | |
!! | CTTGCCGGAGGCGCGGCGAC+CGG | - | tig0011531:30080-30099 | Msa1350470:intergenic | 80.0% |
! | GGTCGCCGCGCCTCCGGCAA+GGG | + | tig0011531:30079-30098 | Msa1350470:CDS | 80.0% |
! | GACCGCCCTTGCCGGAGGCG+CGG | - | tig0011531:30087-30106 | Msa1350470:intergenic | 80.0% |
!! | CGGAGGCGCGGCGACCGGAG+CGG | - | tig0011531:30075-30094 | Msa1350470:intergenic | 85.0% |
! | CGCTCCGGTCGCCGCGCCTC+CGG | + | tig0011531:30073-30092 | Msa1350470:CDS | 85.0% |
! | CGGTCGCCGCGCCTCCGGCA+AGG | + | tig0011531:30078-30097 | Msa1350470:CDS | 85.0% |
! | CGCCGCGCCTCCGGCAAGGG+CGG | + | tig0011531:30082-30101 | Msa1350470:CDS | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0011531 | gene | 29791 | 36243 | 29791 | ID=Msa1350470;Name=Msa1350470 |
tig0011531 | mRNA | 29791 | 36243 | 29791 | ID=Msa1350470-mRNA-1;Parent=Msa1350470;Name=Msa1350470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=230|1|1|1|1|1|10|781|561 |
tig0011531 | exon | 29791 | 30386 | 29791 | ID=Msa1350470-mRNA-1:exon:7407;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 31781 | 31850 | 31781 | ID=Msa1350470-mRNA-1:exon:7408;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 32675 | 32742 | 32675 | ID=Msa1350470-mRNA-1:exon:7409;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 32839 | 32927 | 32839 | ID=Msa1350470-mRNA-1:exon:7410;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 33084 | 33281 | 33084 | ID=Msa1350470-mRNA-1:exon:7411;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 34042 | 34246 | 34042 | ID=Msa1350470-mRNA-1:exon:7412;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 34363 | 34530 | 34363 | ID=Msa1350470-mRNA-1:exon:7413;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 34719 | 34886 | 34719 | ID=Msa1350470-mRNA-1:exon:7414;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 34973 | 35163 | 34973 | ID=Msa1350470-mRNA-1:exon:7415;Parent=Msa1350470-mRNA-1 |
tig0011531 | exon | 35300 | 36243 | 35300 | ID=Msa1350470-mRNA-1:exon:7416;Parent=Msa1350470-mRNA-1 |
tig0011531 | five_prime_UTR | 29791 | 30020 | 29791 | ID=Msa1350470-mRNA-1:five_prime_utr;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 30021 | 30386 | 30021 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 31781 | 31850 | 31781 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 32675 | 32742 | 32675 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 32839 | 32927 | 32839 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 33084 | 33281 | 33084 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 34042 | 34246 | 34042 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 34363 | 34530 | 34363 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 34719 | 34886 | 34719 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 34973 | 35163 | 34973 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | CDS | 35300 | 35462 | 35300 | ID=Msa1350470-mRNA-1:cds;Parent=Msa1350470-mRNA-1 |
tig0011531 | three_prime_UTR | 35463 | 36243 | 35463 | ID=Msa1350470-mRNA-1:three_prime_utr;Parent=Msa1350470-mRNA-1 |
Gene Sequence |
Protein sequence |