AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1354070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1354070 MtrunA17_Chr8g0393151 93.846 260 11 3 43 302 1 255 2.26e-173 479
Msa1354070 MtrunA17_Chr2g0285191 35.681 213 115 5 78 279 413 614 6.27e-34 131
Msa1354070 MtrunA17_Chr2g0285191 35.577 208 123 5 78 279 1068 1270 1.10e-29 119
Msa1354070 MtrunA17_Chr3g0123411 35.047 214 125 4 80 286 922 1128 6.58e-34 131
Msa1354070 MtrunA17_Chr3g0123411 32.328 232 135 5 80 300 266 486 9.10e-21 92.8
Msa1354070 MtrunA17_Chr2g0285301 35.211 213 116 5 78 279 379 580 1.71e-33 130
Msa1354070 MtrunA17_Chr2g0285301 33.493 209 126 4 78 279 1036 1238 9.49e-29 116
Msa1354070 MtrunA17_Chr5g0410921 37.019 208 115 5 80 279 1006 1205 4.41e-33 129
Msa1354070 MtrunA17_Chr5g0410921 36.715 207 117 4 80 279 373 572 1.15e-32 127
Msa1354070 MtrunA17_Chr6g0481921 32.906 234 135 5 78 300 286 508 1.27e-32 127
Msa1354070 MtrunA17_Chr6g0481921 34.052 232 140 5 78 302 942 1167 2.45e-31 123
Msa1354070 MtrunA17_Chr2g0285311 34.272 213 118 5 78 279 384 585 4.73e-32 125
Msa1354070 MtrunA17_Chr2g0285311 33.796 216 130 4 78 286 1040 1249 1.15e-30 121
Msa1354070 MtrunA17_Chr1g0156821 35.185 216 126 5 78 286 1009 1217 1.10e-31 124
Msa1354070 MtrunA17_Chr1g0156821 31.429 210 124 4 80 279 389 588 4.89e-20 90.5
Msa1354070 MtrunA17_Chr7g0233901 36.279 215 121 6 80 286 374 580 2.79e-31 123
Msa1354070 MtrunA17_Chr7g0233901 33.333 210 129 4 78 280 1010 1215 2.05e-28 115
Msa1354070 MtrunA17_Chr3g0119381 35.071 211 115 6 80 279 416 615 2.81e-31 123
Msa1354070 MtrunA17_Chr3g0119381 33.816 207 130 3 77 279 1071 1274 5.72e-26 108
Msa1354070 MtrunA17_Chr4g0061601 34.783 207 122 5 80 279 404 604 9.06e-31 121
Msa1354070 MtrunA17_Chr5g0433051 34.167 240 137 6 53 279 449 680 1.09e-30 121
Msa1354070 MtrunA17_Chr8g0344651 33.981 206 130 3 77 279 1256 1458 1.51e-30 121
Msa1354070 MtrunA17_Chr8g0344651 33.486 218 123 5 80 286 615 821 7.09e-26 107
Msa1354070 MtrunA17_Chr6g0452061 35.749 207 121 4 80 279 546 747 9.25e-30 119
Msa1354070 MtrunA17_Chr6g0452061 37.143 105 63 2 196 300 18 119 2.13e-11 64.7
Msa1354070 MtrunA17_Chr1g0178481 34.468 235 134 5 64 287 380 605 9.27e-30 118
Msa1354070 MtrunA17_Chr7g0264631 31.674 221 137 4 78 291 1096 1309 9.32e-30 119
Msa1354070 MtrunA17_Chr7g0264631 33.491 212 131 5 80 286 443 649 3.94e-28 114
Msa1354070 MtrunA17_Chr6g0452171 36.321 212 113 6 80 279 1037 1238 1.69e-29 118
Msa1354070 MtrunA17_Chr6g0452171 31.897 232 136 4 80 300 378 598 9.32e-28 113
Msa1354070 MtrunA17_Chr6g0451881 35.749 207 121 4 80 279 1024 1225 1.86e-29 118
Msa1354070 MtrunA17_Chr6g0451881 33.636 220 124 4 80 288 378 586 1.61e-27 112
Msa1354070 MtrunA17_Chr1g0194001 34.466 206 128 3 78 279 162 364 2.23e-29 115
Msa1354070 MtrunA17_Chr4g0069401 31.579 228 142 4 80 300 390 610 2.96e-29 117
Msa1354070 MtrunA17_Chr4g0069401 33.981 206 129 3 78 279 1049 1251 1.38e-26 109
Msa1354070 MtrunA17_Chr4g0069351 33.649 211 118 6 80 279 395 594 3.62e-29 117
Msa1354070 MtrunA17_Chr4g0069351 35.407 209 122 4 78 279 1051 1253 1.12e-28 115
Msa1354070 MtrunA17_Chr6g0452041 36.321 212 113 6 80 279 1036 1237 5.13e-29 117
Msa1354070 MtrunA17_Chr6g0452041 31.897 232 136 4 80 300 378 598 2.69e-27 112
Msa1354070 MtrunA17_Chr6g0452071 34.928 209 124 4 78 279 228 431 5.93e-29 115
Msa1354070 MtrunA17_Chr6g0452111 34.783 207 123 4 80 279 1035 1236 6.63e-29 116
Msa1354070 MtrunA17_Chr6g0452111 30.072 276 153 6 54 300 341 605 1.37e-27 112
Msa1354070 MtrunA17_Chr7g0227391 34.951 206 128 5 78 279 440 643 6.88e-29 116
Msa1354070 MtrunA17_Chr1g0180601 32.301 226 130 6 78 292 1070 1283 1.12e-28 115
Msa1354070 MtrunA17_Chr1g0180601 33.333 216 132 6 77 286 413 622 1.21e-28 115
Msa1354070 MtrunA17_Chr4g0069361 35.407 209 122 4 78 279 1051 1253 1.16e-28 115
Msa1354070 MtrunA17_Chr4g0069361 33.175 211 119 6 80 279 395 594 1.83e-28 115
Msa1354070 MtrunA17_Chr1g0193991 34.951 206 127 3 78 279 1059 1261 1.45e-28 115
Msa1354070 MtrunA17_Chr1g0193991 31.527 203 133 3 80 279 406 605 5.76e-28 114
Msa1354070 MtrunA17_Chr6g0486841 32.510 243 146 6 63 297 1001 1233 1.75e-28 115
Msa1354070 MtrunA17_Chr6g0486841 32.710 214 130 4 80 286 376 582 4.61e-23 99.8
Msa1354070 MtrunA17_Chr5g0412741 38.542 192 111 5 93 279 486 675 2.09e-28 115
Msa1354070 MtrunA17_Chr1g0194031 31.188 202 133 3 80 278 401 599 2.52e-28 114
Msa1354070 MtrunA17_Chr4g0069411 32.367 207 126 4 80 279 413 612 3.09e-28 114
Msa1354070 MtrunA17_Chr4g0069411 34.928 209 123 4 78 279 1065 1267 9.44e-28 113
Msa1354070 MtrunA17_Chr6g0452141 34.783 207 123 4 80 279 1034 1235 3.55e-28 114
Msa1354070 MtrunA17_Chr6g0452141 31.897 232 136 4 80 300 379 599 1.50e-27 112
Msa1354070 MtrunA17_Chr4g0041871 31.140 228 138 5 80 295 1023 1243 3.57e-28 114
Msa1354070 MtrunA17_Chr4g0041871 32.381 210 136 3 80 286 360 566 3.85e-26 108
Msa1354070 MtrunA17_Chr6g0453051 33.772 228 137 4 80 300 1025 1245 4.35e-28 114
Msa1354070 MtrunA17_Chr6g0453051 35.266 207 120 4 80 279 380 579 1.13e-26 110
Msa1354070 MtrunA17_Chr5g0433071 33.750 240 138 6 53 279 451 682 9.47e-28 113
Msa1354070 MtrunA17_Chr6g0451911 32.727 220 126 4 80 288 378 586 1.20e-27 112
Msa1354070 MtrunA17_Chr6g0451911 33.333 207 125 4 80 279 1032 1232 3.64e-27 111
Msa1354070 MtrunA17_Chr3g0138211 31.280 211 123 5 80 279 413 612 1.42e-27 112
Msa1354070 MtrunA17_Chr3g0138211 34.737 190 117 3 94 279 1069 1255 5.09e-24 102
Msa1354070 MtrunA17_Chr8g0341851 34.091 220 122 6 80 288 1236 1443 1.66e-27 112
Msa1354070 MtrunA17_Chr8g0341851 28.054 221 134 9 64 278 606 807 5.87e-12 66.6
Msa1354070 MtrunA17_Chr4g0039821 35.885 209 121 4 78 279 1049 1251 2.59e-27 112
Msa1354070 MtrunA17_Chr4g0039821 31.527 203 133 3 80 279 393 592 2.28e-26 109
Msa1354070 MtrunA17_Chr8g0376961 33.333 243 147 6 55 290 1189 1423 7.17e-27 110
Msa1354070 MtrunA17_Chr8g0376961 28.571 196 120 6 88 279 612 791 5.16e-14 72.8
Msa1354070 MtrunA17_Chr3g0128381 31.780 236 143 5 80 302 407 637 1.15e-26 109
Msa1354070 MtrunA17_Chr3g0085281 33.766 231 138 5 63 286 1220 1442 2.01e-26 109
Msa1354070 MtrunA17_Chr3g0085281 29.000 200 115 7 88 279 617 797 1.08e-11 65.5
Msa1354070 MtrunA17_Chr6g0474071 33.953 215 120 5 78 280 228 432 2.18e-26 107
Msa1354070 MtrunA17_Chr8g0366481 37.019 208 115 5 80 279 403 602 4.54e-26 108
Msa1354070 MtrunA17_Chr6g0452081 34.409 186 101 3 89 263 49 224 7.50e-26 102
Msa1354070 MtrunA17_Chr8g0337191 32.314 229 142 5 64 286 1239 1460 8.02e-26 107
Msa1354070 MtrunA17_Chr8g0341751 32.340 235 134 7 80 302 1060 1281 1.51e-25 107
Msa1354070 MtrunA17_Chr8g0337121 31.878 229 143 5 64 286 1259 1480 1.62e-25 106
Msa1354070 MtrunA17_Chr6g0472531 32.245 245 149 7 63 299 1178 1413 2.18e-25 106
Msa1354070 MtrunA17_Chr6g0472531 29.091 220 134 8 64 279 573 774 1.78e-13 70.9
Msa1354070 MtrunA17_Chr8g0353781 32.479 234 135 8 80 302 1227 1448 2.41e-25 106
Msa1354070 MtrunA17_Chr8g0353781 26.471 204 127 7 81 279 617 802 5.26e-12 66.6
Msa1354070 MtrunA17_Chr8g0359291 32.389 247 146 8 63 299 409 644 2.96e-25 105
Msa1354070 MtrunA17_Chr8g0341761 32.609 230 140 8 80 302 1221 1442 3.20e-25 105
Msa1354070 MtrunA17_Chr8g0353541 31.915 235 135 7 80 302 844 1065 4.76e-25 105
Msa1354070 MtrunA17_Chr6g0463121 31.452 248 147 6 63 299 1227 1462 1.87e-24 103
Msa1354070 MtrunA17_Chr6g0463121 27.083 240 144 8 64 293 622 840 1.08e-11 65.5
Msa1354070 MtrunA17_Chr6g0463141 32.794 247 145 8 63 299 1252 1487 4.34e-24 102
Msa1354070 MtrunA17_Chr8g0341811 31.624 234 137 8 80 302 1048 1269 7.47e-24 102
Msa1354070 MtrunA17_Chr6g0463131 31.020 245 152 7 63 299 1228 1463 1.02e-23 101
Msa1354070 MtrunA17_Chr6g0463131 29.130 230 135 10 64 286 623 831 7.58e-12 66.2
Msa1354070 MtrunA17_Chr8g0341801 30.736 231 143 6 80 302 203 424 1.31e-23 100
Msa1354070 MtrunA17_Chr6g0463151 31.579 247 148 8 63 299 1045 1280 1.53e-23 100
Msa1354070 MtrunA17_Chr6g0463151 27.586 203 126 7 81 279 456 641 4.22e-11 63.9
Msa1354070 MtrunA17_Chr5g0412721 33.023 215 127 5 80 286 1262 1467 1.85e-23 100
Msa1354070 MtrunA17_Chr5g0412721 29.268 205 120 9 81 279 637 822 6.32e-11 63.2
Msa1354070 MtrunA17_Chr6g0463391 31.760 233 139 5 63 286 413 634 2.02e-23 100
Msa1354070 MtrunA17_Chr2g0295901 30.488 246 156 7 64 302 1258 1495 3.07e-23 100
Msa1354070 MtrunA17_Chr5g0412941 30.924 249 149 6 52 286 67 306 4.67e-23 97.1
Msa1354070 MtrunA17_Chr1g0183191 30.453 243 153 7 64 300 1284 1516 5.90e-23 99.4
Msa1354070 MtrunA17_Chr1g0183191 30.233 215 125 9 81 289 661 856 6.70e-11 63.2
Msa1354070 MtrunA17_Chr6g0463181 30.612 245 153 7 63 299 1211 1446 6.67e-23 99.0
Msa1354070 MtrunA17_Chr6g0463181 27.273 220 138 8 64 279 609 810 1.50e-11 65.1
Msa1354070 MtrunA17_Chr3g0101441 32.110 218 125 6 80 286 1078 1283 6.79e-23 99.0
Msa1354070 MtrunA17_Chr3g0101441 29.767 215 120 10 81 286 450 642 1.77e-11 65.1
Msa1354070 MtrunA17_Chr3g0101471 31.308 214 132 5 80 286 1076 1281 2.04e-22 97.8
Msa1354070 MtrunA17_Chr6g0463211 31.760 233 139 5 63 286 1299 1520 2.92e-22 97.4
Msa1354070 MtrunA17_Chr6g0463211 26.749 243 134 9 60 277 636 859 6.01e-11 63.5
Msa1354070 MtrunA17_Chr1g0195691 32.780 241 147 4 61 294 1270 1502 5.77e-22 96.3
Msa1354070 MtrunA17_Chr1g0195691 28.251 223 127 9 74 286 661 860 4.87e-12 66.6
Msa1354070 MtrunA17_Chr7g0249091 29.630 243 147 7 76 297 96 335 8.20e-22 94.0
Msa1354070 MtrunA17_Chr7g0262191 29.630 243 155 7 64 300 1284 1516 1.46e-21 95.1
Msa1354070 MtrunA17_Chr3g0101461 33.023 215 127 8 80 286 1078 1283 1.50e-21 95.1
Msa1354070 MtrunA17_Chr3g0101461 29.767 215 120 10 81 286 450 642 5.16e-11 63.5
Msa1354070 MtrunA17_Chr2g0295911 30.603 232 142 7 64 286 1261 1482 1.60e-21 95.1
Msa1354070 MtrunA17_Chr6g0484351 31.349 252 148 7 63 302 411 649 1.76e-21 94.7
Msa1354070 MtrunA17_Chr5g0445741 30.901 233 142 5 63 286 1250 1472 1.97e-21 94.7
Msa1354070 MtrunA17_Chr1g0202221 30.472 233 143 5 63 286 1134 1356 3.01e-21 94.4
Msa1354070 MtrunA17_Chr1g0202221 28.507 221 135 9 64 279 620 822 1.76e-12 68.2
Msa1354070 MtrunA17_Chr8g0363771 30.435 230 145 6 64 286 1258 1479 4.62e-21 93.6
Msa1354070 MtrunA17_Chr2g0295921 30.435 230 145 6 64 286 1273 1494 4.67e-21 93.6
Msa1354070 MtrunA17_Chr5g0445671 30.120 249 151 6 52 286 842 1081 6.26e-21 93.2
Msa1354070 MtrunA17_Chr5g0445671 29.469 207 117 9 81 279 257 442 7.40e-12 66.2
Msa1354070 MtrunA17_Chr3g0101481 30.841 214 133 4 80 286 1271 1476 1.03e-20 92.8
Msa1354070 MtrunA17_Chr3g0101481 31.776 214 119 10 80 286 641 834 1.03e-12 68.6
Msa1354070 MtrunA17_Chr1g0212701 28.846 208 139 4 77 280 414 616 2.99e-20 91.3
Msa1354070 MtrunA17_Chr1g0212701 28.986 207 134 5 80 279 1164 1364 1.73e-15 77.0
Msa1354070 MtrunA17_Chr7g0222781 28.708 209 138 5 77 280 420 622 3.97e-20 90.9
Msa1354070 MtrunA17_Chr7g0222781 29.469 207 133 5 80 279 1172 1372 9.66e-16 77.8
Msa1354070 MtrunA17_Chr2g0333911 32.609 230 137 7 81 302 791 1010 4.13e-20 90.9
Msa1354070 MtrunA17_Chr2g0333911 28.302 212 124 6 74 277 171 362 4.28e-12 66.6
Msa1354070 MtrunA17_Chr6g0463201 29.915 234 142 6 63 286 1233 1454 9.64e-20 89.7
Msa1354070 MtrunA17_Chr6g0463201 28.689 244 132 11 60 279 603 828 7.06e-13 69.3
Msa1354070 MtrunA17_Chr5g0445701 30.688 189 119 4 80 262 12 194 1.68e-19 85.9
Msa1354070 MtrunA17_Chr3g0130211 31.373 204 121 5 78 278 53 240 8.41e-19 84.3
Msa1354070 MtrunA17_Chr7g0257341 26.407 231 157 6 64 286 1458 1683 4.65e-18 84.7
Msa1354070 MtrunA17_Chr7g0257341 26.613 248 156 9 42 277 532 765 1.49e-11 65.1
Msa1354070 MtrunA17_Chr6g0471281 31.727 249 139 10 63 296 1228 1460 3.37e-17 82.0
Msa1354070 MtrunA17_Chr6g0471281 27.442 215 125 8 81 286 639 831 2.94e-11 64.3
Msa1354070 MtrunA17_Chr3g0128391 28.477 151 100 2 80 230 273 415 7.71e-17 80.9
Msa1354070 MtrunA17_Chr3g0128391 42.857 84 45 2 196 279 451 531 4.72e-11 63.2
Msa1354070 MtrunA17_Chr3g0093091 25.352 213 143 6 81 286 638 841 9.69e-16 77.8
Msa1354070 MtrunA17_Chr4g0060431 25.446 224 148 8 71 286 609 821 1.40e-15 77.4
Msa1354070 MtrunA17_Chr2g0316301 32.710 214 127 9 76 278 69 276 1.53e-15 77.0
Msa1354070 MtrunA17_Chr8g0366451 36.842 114 68 1 80 193 332 441 1.77e-15 76.3
Msa1354070 MtrunA17_Chr3g0080941 29.858 211 143 4 80 288 1251 1458 2.29e-15 76.6
Msa1354070 MtrunA17_Chr3g0080941 29.057 265 153 11 51 299 594 839 1.49e-14 74.3
Msa1354070 MtrunA17_Chr4g0060501 23.684 228 155 7 71 290 624 840 4.57e-15 75.9
Msa1354070 MtrunA17_Chr4g0060421 26.339 224 146 9 71 286 144 356 7.91e-15 74.3
Msa1354070 MtrunA17_Chr5g0411621 29.730 222 140 7 70 278 36 254 1.18e-14 74.3
Msa1354070 MtrunA17_Chr8g0371961 36.782 87 55 0 80 166 18 104 1.62e-14 68.9
Msa1354070 MtrunA17_Chr2g0285731 29.464 224 135 8 62 279 613 819 2.15e-14 73.9
Msa1354070 MtrunA17_Chr2g0285731 29.302 215 135 4 80 286 1253 1458 4.41e-13 69.7
Msa1354070 MtrunA17_Chr3g0080981 28.352 261 153 9 35 279 578 820 2.38e-14 73.6
Msa1354070 MtrunA17_Chr3g0080981 27.700 213 145 4 80 288 1250 1457 2.18e-13 70.9
Msa1354070 MtrunA17_Chr4g0060401 23.111 225 152 7 71 286 622 834 4.83e-14 72.8
Msa1354070 MtrunA17_Chr4g0060471 27.179 195 132 5 96 286 1 189 1.09e-13 70.1
Msa1354070 MtrunA17_Chr8g0393191 28.085 235 146 9 69 286 53 281 3.50e-13 70.1
Msa1354070 MtrunA17_Chr6g0452051 37.647 85 53 0 80 164 299 383 1.39e-12 67.8
Msa1354070 MtrunA17_Chr8g0384391 27.778 234 148 7 30 257 17 235 5.13e-12 66.2
Msa1354070 MtrunA17_Chr7g0263351 28.070 228 148 6 75 291 122 344 7.92e-12 65.9
Msa1354070 MtrunA17_Chr8g0371361 29.469 207 111 5 79 257 167 366 1.92e-11 64.7
Msa1354070 MtrunA17_Chr7g0224741 26.291 213 145 6 64 267 53 262 2.77e-11 63.2
Msa1354070 MtrunA17_Chr1g0198931 28.019 207 135 6 79 275 106 308 3.71e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1354070 AT1G67940.1 72.727 242 62 2 61 302 26 263 1.45e-126 362
Msa1354070 AT5G46540.1 35.681 213 115 5 78 279 372 573 4.48e-35 135
Msa1354070 AT5G46540.1 33.493 209 126 5 78 279 1020 1222 2.05e-26 109
Msa1354070 AT1G27940.2 37.915 211 115 5 77 279 804 1006 1.45e-33 130
Msa1354070 AT1G27940.2 33.816 207 123 4 80 279 174 373 3.60e-28 114
Msa1354070 AT1G27940.1 37.915 211 115 5 77 279 1018 1220 3.25e-33 129
Msa1354070 AT1G27940.1 33.816 207 123 4 80 279 388 587 7.11e-28 114
Msa1354070 AT4G18050.1 34.742 213 117 5 78 279 370 571 2.12e-32 127
Msa1354070 AT4G18050.1 32.057 209 129 4 78 279 1008 1210 2.06e-26 109
Msa1354070 AT4G18050.2 34.742 213 117 5 78 279 380 581 2.16e-32 127
Msa1354070 AT4G18050.2 32.057 209 129 4 78 279 1018 1220 2.25e-26 109
Msa1354070 AT4G25960.1 35.749 207 119 4 80 279 418 617 9.21e-32 125
Msa1354070 AT4G25960.1 30.798 263 144 8 40 279 999 1246 3.16e-27 112
Msa1354070 AT4G01830.2 32.340 235 137 5 77 300 133 356 9.40e-31 122
Msa1354070 AT4G01830.2 33.493 209 127 4 78 279 766 969 1.26e-27 113
Msa1354070 AT3G28390.1 37.073 205 121 4 80 279 997 1198 1.01e-30 122
Msa1354070 AT3G28390.1 34.783 207 121 4 80 279 364 563 3.86e-29 117
Msa1354070 AT1G28010.1 35.437 206 127 3 77 279 1020 1222 1.34e-30 122
Msa1354070 AT1G28010.1 34.783 207 121 4 80 279 389 588 4.19e-29 117
Msa1354070 AT4G01830.1 31.915 235 138 5 77 300 367 590 1.64e-30 121
Msa1354070 AT4G01830.1 33.493 209 127 4 78 279 1000 1203 2.01e-27 112
Msa1354070 AT5G58270.1 37.981 208 115 4 79 279 493 693 1.84e-30 121
Msa1354070 AT1G02530.1 32.843 204 131 3 79 279 384 584 1.94e-30 121
Msa1354070 AT1G02530.1 33.493 209 128 4 78 279 1042 1246 6.01e-27 111
Msa1354070 AT1G02530.2 32.843 204 131 3 79 279 384 584 2.32e-30 121
Msa1354070 AT1G02520.1 32.843 204 131 3 79 279 397 597 4.32e-30 120
Msa1354070 AT1G02520.1 33.971 209 127 4 78 279 1047 1251 4.57e-27 111
Msa1354070 AT1G02520.2 32.843 204 131 3 79 279 397 597 4.32e-30 120
Msa1354070 AT1G02520.2 33.971 209 127 4 78 279 1047 1251 4.57e-27 111
Msa1354070 AT1G02520.3 32.843 204 131 3 79 279 397 597 4.32e-30 120
Msa1354070 AT1G02520.3 33.971 209 127 4 78 279 1047 1251 4.57e-27 111
Msa1354070 AT2G47000.3 32.547 212 121 5 79 279 400 600 1.04e-29 119
Msa1354070 AT2G47000.7 32.547 212 121 5 79 279 400 600 1.04e-29 119
Msa1354070 AT2G47000.6 32.547 212 121 5 79 279 400 600 1.05e-29 119
Msa1354070 AT2G47000.6 35.185 216 127 4 78 286 1057 1266 2.26e-28 115
Msa1354070 AT2G47000.5 32.547 212 121 5 79 279 400 600 1.05e-29 119
Msa1354070 AT2G47000.5 35.185 216 127 4 78 286 1057 1266 2.26e-28 115
Msa1354070 AT2G47000.1 32.547 212 121 5 79 279 400 600 1.05e-29 119
Msa1354070 AT2G47000.1 35.185 216 127 4 78 286 1057 1266 2.26e-28 115
Msa1354070 AT2G47000.4 32.547 212 121 5 79 279 400 600 1.06e-29 119
Msa1354070 AT3G28380.1 36.585 205 122 4 80 279 1012 1213 1.07e-29 119
Msa1354070 AT3G28380.1 34.783 207 121 4 80 279 376 575 1.22e-29 119
Msa1354070 AT2G47000.2 32.547 212 121 5 79 279 400 600 1.18e-29 119
Msa1354070 AT2G47000.2 37.647 85 53 0 78 162 1057 1141 6.21e-12 66.6
Msa1354070 AT1G10680.1 32.895 228 123 6 88 292 1007 1227 1.63e-29 119
Msa1354070 AT1G10680.1 35.678 199 114 4 88 279 386 577 4.29e-29 117
Msa1354070 AT3G62150.3 33.019 212 120 5 79 279 419 619 1.73e-29 119
Msa1354070 AT3G62150.3 34.928 209 123 4 78 279 1067 1269 5.66e-29 117
Msa1354070 AT3G62150.2 33.019 212 120 5 79 279 419 619 1.73e-29 119
Msa1354070 AT3G62150.2 34.928 209 123 4 78 279 1067 1269 5.66e-29 117
Msa1354070 AT3G62150.1 33.019 212 120 5 79 279 419 619 1.73e-29 119
Msa1354070 AT3G62150.1 34.928 209 123 4 78 279 1067 1269 5.66e-29 117
Msa1354070 AT4G01820.1 30.667 225 150 3 79 300 364 585 2.97e-29 118
Msa1354070 AT4G01820.1 32.367 207 132 3 78 279 999 1202 8.26e-25 105
Msa1354070 AT3G28360.1 36.019 211 113 5 80 279 363 562 3.76e-29 117
Msa1354070 AT3G28360.1 34.146 205 127 4 80 279 998 1199 3.90e-27 112
Msa1354070 AT4G01820.2 30.667 225 150 3 79 300 364 585 4.25e-29 117
Msa1354070 AT1G10680.2 35.678 199 114 4 88 279 386 577 4.54e-29 117
Msa1354070 AT1G10680.2 36.667 150 84 2 88 230 1007 1152 5.16e-23 99.8
Msa1354070 AT1G70610.2 34.928 209 129 5 77 280 288 494 5.02e-29 116
Msa1354070 AT3G28345.1 34.862 218 120 5 80 286 376 582 7.38e-29 117
Msa1354070 AT3G28345.1 36.585 205 122 4 80 279 1012 1213 4.30e-28 114
Msa1354070 AT1G70610.1 34.928 209 129 5 77 280 469 675 9.39e-29 116
Msa1354070 AT2G36910.1 32.536 209 127 4 78 279 1039 1240 1.54e-28 115
Msa1354070 AT2G36910.1 32.558 215 133 6 78 286 383 591 5.03e-27 111
Msa1354070 AT3G28415.2 36.893 206 120 5 80 279 1001 1202 1.56e-28 115
Msa1354070 AT3G28415.2 34.783 207 121 4 80 279 363 562 7.58e-28 114
Msa1354070 AT3G28415.1 36.893 206 120 5 80 279 993 1194 1.60e-28 115
Msa1354070 AT3G28415.1 34.783 207 121 4 80 279 355 554 7.93e-28 114
Msa1354070 AT3G28860.1 33.478 230 139 4 80 302 1027 1249 7.40e-28 114
Msa1354070 AT3G28860.1 33.990 203 128 4 80 279 382 581 1.98e-27 112
Msa1354070 AT4G28620.1 36.058 208 119 4 79 279 453 653 8.02e-28 113
Msa1354070 AT5G03910.1 34.783 230 142 3 63 287 395 621 1.67e-27 112
Msa1354070 AT5G39040.1 34.300 207 123 5 80 279 413 613 1.11e-26 110
Msa1354070 AT4G28630.1 35.096 208 121 4 79 279 451 651 1.21e-26 110
Msa1354070 AT3G60160.1 33.023 215 131 5 80 288 1271 1478 4.27e-26 108
Msa1354070 AT3G60160.3 33.023 215 131 5 80 288 1235 1442 4.67e-26 108
Msa1354070 AT3G21250.6 32.287 223 136 6 80 295 815 1029 5.39e-26 108
Msa1354070 AT3G21250.3 32.287 223 136 6 80 295 815 1029 5.39e-26 108
Msa1354070 AT3G21250.4 32.287 223 136 6 80 295 1237 1451 5.70e-26 108
Msa1354070 AT3G21250.5 32.287 223 136 6 80 295 1226 1440 6.50e-26 108
Msa1354070 AT3G21250.1 32.287 223 136 6 80 295 1220 1434 6.68e-26 108
Msa1354070 AT3G21250.2 32.287 223 136 6 80 295 1231 1445 7.21e-26 108
Msa1354070 AT1G65410.1 29.630 243 147 6 76 297 95 334 5.74e-25 102
Msa1354070 AT4G25450.3 30.769 208 136 3 78 280 316 520 8.97e-25 104
Msa1354070 AT4G25450.1 30.769 208 136 3 78 280 485 689 1.08e-24 104
Msa1354070 AT3G60970.1 33.023 215 131 5 80 288 818 1025 1.66e-24 103
Msa1354070 AT3G60970.1 27.962 211 129 7 81 286 232 424 1.59e-11 65.5
Msa1354070 AT1G04120.3 31.556 225 142 6 80 300 1249 1465 6.03e-24 102
Msa1354070 AT1G04120.1 31.556 225 142 6 80 300 1284 1500 8.10e-24 102
Msa1354070 AT1G04120.2 31.839 223 139 6 80 300 1284 1495 1.30e-23 101
Msa1354070 AT5G61740.2 26.217 267 158 8 48 286 522 777 1.22e-22 98.6
Msa1354070 AT5G61740.1 26.217 267 158 8 48 286 556 811 1.34e-22 98.6
Msa1354070 AT5G61740.3 26.217 267 158 8 48 286 417 672 1.51e-22 98.2
Msa1354070 AT3G13080.1 30.279 251 149 7 50 286 1252 1490 1.60e-22 98.6
Msa1354070 AT3G13100.2 31.754 211 135 4 80 286 1012 1217 1.26e-21 95.9
Msa1354070 AT3G13100.1 32.407 216 127 5 80 286 1257 1462 1.40e-21 95.5
Msa1354070 AT3G13090.1 30.290 241 149 6 55 286 1210 1440 1.54e-21 95.5
Msa1354070 AT3G13080.5 30.000 240 142 7 50 275 1252 1479 1.78e-21 95.5
Msa1354070 AT3G47760.1 25.592 211 153 3 81 290 595 802 6.32e-21 93.6
Msa1354070 AT3G59140.1 31.308 214 132 5 80 286 1223 1428 6.90e-21 93.6
Msa1354070 AT3G59140.1 26.754 228 146 6 56 279 595 805 3.11e-11 64.7
Msa1354070 AT3G47760.2 25.592 211 153 3 81 290 605 812 7.23e-21 93.2
Msa1354070 AT3G47760.3 25.592 211 153 3 81 290 635 842 7.66e-21 93.2
Msa1354070 AT2G07680.6 31.579 228 140 5 81 301 1108 1326 1.65e-20 92.4
Msa1354070 AT2G07680.6 30.244 205 115 8 81 277 502 686 3.67e-12 67.4
Msa1354070 AT2G07680.4 31.579 228 140 5 81 301 1182 1400 1.87e-20 92.4
Msa1354070 AT2G07680.4 30.189 212 119 8 74 277 570 760 3.71e-12 67.4
Msa1354070 AT2G07680.1 31.579 228 140 5 81 301 1185 1403 1.90e-20 92.4
Msa1354070 AT2G07680.1 30.189 212 119 8 74 277 573 763 3.77e-12 67.4
Msa1354070 AT2G07680.5 31.579 228 140 5 81 301 1191 1409 2.05e-20 92.0
Msa1354070 AT2G07680.5 30.189 212 119 8 74 277 579 769 3.61e-12 67.4
Msa1354070 AT2G07680.3 31.579 228 140 5 81 301 1207 1425 2.18e-20 92.0
Msa1354070 AT2G07680.3 30.660 212 118 9 74 277 595 785 4.03e-12 67.4
Msa1354070 AT3G62700.1 33.178 214 128 4 80 286 1313 1518 2.47e-20 92.0
Msa1354070 AT3G62700.1 29.487 234 131 10 64 286 639 849 4.64e-11 64.3
Msa1354070 AT3G47780.1 25.604 207 150 3 81 286 634 837 2.74e-20 91.7
Msa1354070 AT3G47750.1 25.837 209 151 3 83 290 638 843 9.23e-20 90.1
Msa1354070 AT2G47800.1 33.645 214 127 4 80 286 1290 1495 2.30e-19 89.0
Msa1354070 AT2G47800.1 29.515 227 119 10 74 286 652 851 1.46e-11 65.9
Msa1354070 AT5G61700.1 23.387 248 167 4 48 275 564 808 3.94e-19 88.2
Msa1354070 AT2G39480.2 28.641 206 142 3 77 280 246 448 4.83e-19 88.2
Msa1354070 AT2G39480.2 28.502 207 135 5 80 279 995 1195 1.31e-15 77.8
Msa1354070 AT3G47770.1 27.511 229 156 6 64 286 584 808 5.23e-19 87.8
Msa1354070 AT3G47770.2 27.511 229 156 6 64 286 610 834 5.90e-19 87.8
Msa1354070 AT2G39480.1 28.641 206 142 3 77 280 426 628 5.98e-19 87.8
Msa1354070 AT2G39480.1 28.502 207 135 5 80 279 1175 1375 1.65e-15 77.4
Msa1354070 AT3G47740.1 25.000 204 149 3 84 286 634 834 2.01e-18 86.3
Msa1354070 AT3G55320.1 27.670 206 144 3 77 280 428 630 2.54e-18 85.9
Msa1354070 AT3G55320.1 28.502 207 135 5 80 279 1176 1376 2.65e-14 73.9
Msa1354070 AT3G47790.1 26.432 227 150 8 71 290 598 814 1.00e-17 84.0
Msa1354070 AT3G13080.2 29.046 241 140 7 50 286 1252 1465 4.80e-17 82.0
Msa1354070 AT2G41700.2 24.409 254 172 7 52 290 1392 1640 8.71e-17 81.3
Msa1354070 AT2G41700.1 24.409 254 172 7 52 290 1434 1682 1.13e-16 81.3
Msa1354070 AT2G34660.1 27.757 263 156 10 48 299 598 837 1.24e-15 77.8
Msa1354070 AT2G34660.1 28.837 215 136 6 80 286 1258 1463 1.60e-12 68.6
Msa1354070 AT2G34660.2 27.757 263 156 10 48 299 598 837 1.24e-15 77.8
Msa1354070 AT2G34660.2 28.837 215 136 6 80 286 1258 1463 1.60e-12 68.6
Msa1354070 AT2G34660.3 28.137 263 155 11 48 299 311 550 1.55e-15 77.8
Msa1354070 AT2G34660.3 28.837 215 136 6 80 286 971 1176 1.45e-12 68.6
Msa1354070 AT5G61700.2 23.111 225 152 3 48 252 564 787 2.16e-15 77.0
Msa1354070 AT5G61700.4 23.111 225 152 3 48 252 564 787 2.16e-15 77.0
Msa1354070 AT1G30410.3 28.862 246 145 9 47 279 591 819 1.19e-14 75.1
Msa1354070 AT3G60160.2 43.750 80 45 0 80 159 1271 1350 1.20e-14 75.1
Msa1354070 AT1G30410.5 28.862 246 145 9 47 279 476 704 1.21e-14 75.1
Msa1354070 AT1G30410.5 27.313 227 156 4 64 286 1120 1341 3.93e-13 70.5
Msa1354070 AT1G30410.1 28.862 246 145 9 47 279 594 822 1.23e-14 75.1
Msa1354070 AT1G30410.1 27.313 227 156 4 64 286 1238 1459 3.60e-13 70.5
Msa1354070 AT1G30410.2 28.862 246 145 9 47 279 591 819 1.30e-14 74.7
Msa1354070 AT1G30410.2 26.872 227 157 4 64 286 1235 1456 3.80e-13 70.5
Msa1354070 AT1G30410.6 28.862 246 145 9 47 279 591 819 1.30e-14 74.7
Msa1354070 AT1G30410.6 26.872 227 157 4 64 286 1235 1456 3.80e-13 70.5
Msa1354070 AT1G30410.4 28.862 246 145 9 47 279 591 819 1.30e-14 74.7
Msa1354070 AT1G30410.4 26.872 227 157 4 64 286 1235 1456 3.80e-13 70.5
Msa1354070 AT2G13610.1 29.762 252 155 9 57 292 37 282 3.70e-14 73.2
Msa1354070 AT1G30400.2 28.626 262 161 11 45 299 595 837 7.31e-14 72.8
Msa1354070 AT1G30400.2 29.767 215 134 5 80 286 1253 1458 2.58e-12 67.8
Msa1354070 AT1G30400.1 28.626 262 161 11 45 299 595 837 7.31e-14 72.8
Msa1354070 AT1G30400.1 29.767 215 134 5 80 286 1253 1458 2.58e-12 67.8
Msa1354070 AT4G33460.1 29.902 204 124 6 80 279 59 247 1.03e-13 70.5
Msa1354070 AT1G63270.1 30.811 185 103 4 79 253 24 193 1.44e-13 69.3
Msa1354070 AT1G30420.1 28.269 283 151 12 35 289 571 829 1.48e-13 71.6
Msa1354070 AT1G30420.1 26.222 225 161 4 64 286 1235 1456 3.73e-13 70.5
Msa1354070 AT4G25750.1 31.373 204 129 5 80 278 30 227 4.90e-13 69.7
Msa1354070 AT3G47790.2 26.455 189 124 6 71 252 479 659 8.44e-13 69.3
Msa1354070 AT3G47790.3 26.455 189 124 6 71 252 598 778 9.31e-13 68.9
Msa1354070 AT5G14100.1 29.004 231 148 7 64 283 51 276 3.05e-12 66.2
Msa1354070 AT1G31770.1 27.586 261 159 9 28 275 37 280 1.18e-11 65.9
Msa1354070 AT2G37360.1 25.954 262 168 9 50 293 103 356 2.86e-11 64.7
Msa1354070 AT5G52860.1 28.507 221 148 5 62 278 26 240 2.86e-11 64.3
Msa1354070 AT3G25620.2 29.612 206 129 7 80 275 99 298 3.87e-11 63.9
Msa1354070 AT3G47730.1 20.312 256 187 7 26 277 499 741 4.27e-11 64.3
Msa1354070 AT3G25620.1 29.612 206 129 7 80 275 99 298 4.70e-11 63.5
Msa1354070 AT1G53270.1 29.327 208 136 6 80 279 50 254 5.08e-11 63.5
Msa1354070 AT5G39040.2 33.735 83 55 0 80 162 413 495 7.07e-11 63.2
Msa1354070 AT3G55100.1 29.358 218 138 6 80 286 51 263 9.13e-11 63.2
Msa1354070 AT3G55100.2 29.358 218 138 6 80 286 51 263 9.13e-11 63.2

Find 109 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATATTTGCTTGCTTTAA+AGG 0.031502 tig0014199:+14423 Msa1354070:three_prime_UTR
CCAATTATGTCTTCCGTCTT+AGG 0.197172 tig0014199:+13456 Msa1354070:CDS
CCTAAGACGGAAGACATAAT+TGG 0.197284 tig0014199:-13456 None:intergenic
CACTTTCACTTTCACTTGTT+GGG 0.266483 tig0014199:+14342 Msa1354070:three_prime_UTR
CAGCTCCCTGCTCTCTTTGA+AGG 0.288977 tig0014199:+13856 Msa1354070:CDS
ATCCCAACAACCATACCTTT+TGG 0.293764 tig0014199:-13685 None:intergenic
TCACTTTCACTTTCACTTGT+TGG 0.322826 tig0014199:+14341 Msa1354070:three_prime_UTR
TTGTTTGTGGTGTGGCTCTT+TGG 0.333197 tig0014199:+13350 Msa1354070:CDS
ATAAATTAAGTAGGAACATA+TGG 0.345722 tig0014199:-14375 None:intergenic
CATGAAGTTGAACAAGAATC+AGG 0.361069 tig0014199:+14143 Msa1354070:CDS
CTAGTGTGCTTGGTTGTTGA+TGG 0.364596 tig0014199:+14222 Msa1354070:CDS
TGCTGACCTCTCTGTTGGTC+AGG 0.366632 tig0014199:+14008 Msa1354070:CDS
TATGGTGACCATATGAATAT+AGG 0.376284 tig0014199:-13395 None:intergenic
TTCTTCTTCTACTAATTTCA+AGG 0.377037 tig0014199:+13975 Msa1354070:CDS
GCGGCAAGTCAACCCTCTTA+AGG 0.384595 tig0014199:+13725 Msa1354070:CDS
TGAGCTTGAGAGAGTTGATT+AGG 0.394063 tig0014199:-14267 None:intergenic
TAAGGGCCTTGAATCGCCTC+TGG 0.396921 tig0014199:+13743 Msa1354070:CDS
TTCATATTCCTATATTCATA+TGG 0.402541 tig0014199:+13387 Msa1354070:CDS
TCCCAAAAGGTATGGTTGTT+GGG 0.415953 tig0014199:+13683 Msa1354070:CDS
GGTATGGTTGTTGGGATCAT+AGG 0.418866 tig0014199:+13691 Msa1354070:CDS
TTTGACAGAGCACTTGTTGT+TGG 0.423452 tig0014199:+13555 Msa1354070:intron
CGGCAAGTCAACCCTCTTAA+GGG 0.436573 tig0014199:+13726 Msa1354070:CDS
CTCAAAGAGTTGCACTTGCC+AGG 0.439343 tig0014199:+14031 Msa1354070:CDS
ATAATGTATTTCTATTATGT+TGG 0.441438 tig0014199:+13247 None:intergenic
ATTGATGAAATAAAATGAAA+TGG 0.441815 tig0014199:-13273 None:intergenic
GGCGATTCAAGGCCCTTAAG+AGG 0.442745 tig0014199:-13738 None:intergenic
ACTAATTTCAAGGATAAGTC+AGG 0.447217 tig0014199:+13985 Msa1354070:CDS
CTGAGAAAAGAATCGGATGA+TGG 0.447625 tig0014199:+13625 Msa1354070:CDS
ATCCCAAAAGGTATGGTTGT+TGG 0.457558 tig0014199:+13682 Msa1354070:CDS
CGTTCTTTCCCTCCGCCGTA+AGG 0.459477 tig0014199:+13819 Msa1354070:CDS
AGCTCCCTGCTCTCTTTGAA+GGG 0.462275 tig0014199:+13857 Msa1354070:CDS
CTAAGACGGAAGACATAATT+GGG 0.463489 tig0014199:-13455 None:intergenic
AGCTTTATTCCCCTCAGTTG+TGG 0.464930 tig0014199:-13907 None:intergenic
TGCATAAGTGGTAATAAGAA+TGG 0.473762 tig0014199:+14482 Msa1354070:three_prime_UTR
TAAATTAAGTAGGAACATAT+GGG 0.474964 tig0014199:-14374 None:intergenic
GAAAGAGCATGGCGACCTTA+CGG 0.480074 tig0014199:-13834 None:intergenic
GCATGGCGACCTTACGGCGG+AGG 0.486540 tig0014199:-13828 None:intergenic
TCAACTGACATGTGCATAAG+TGG 0.495124 tig0014199:+14470 Msa1354070:three_prime_UTR
TGGCTCCCAGAGGCGATTCA+AGG 0.499145 tig0014199:-13749 None:intergenic
AGAGCACTTGTTGTTGGATG+TGG 0.499445 tig0014199:+13561 Msa1354070:intron
GACGGAAGACATAATTGGGT+TGG 0.499722 tig0014199:-13451 None:intergenic
ACGGAAGACATAATTGGGTT+GGG 0.501095 tig0014199:-13450 None:intergenic
GTTGACTTGCCGCTGCCACT+AGG 0.501645 tig0014199:-13715 None:intergenic
CAACCTTTCTTTACCTAAGA+CGG 0.501689 tig0014199:-13469 None:intergenic
AATGAGAATGTATTATTGTA+TGG 0.510270 tig0014199:-13413 None:intergenic
TCCTCCTCCGTCTTCCTCGA+TGG 0.512098 tig0014199:+13775 Msa1354070:CDS
GTTGCGGACAACGTGAGATA+TGG 0.514877 tig0014199:+13883 Msa1354070:CDS
ATTGGATCTAATGCACTAGT+AGG 0.518384 tig0014199:-14093 None:intergenic
TGAGAAAAGAATCGGATGAT+GGG 0.519552 tig0014199:+13626 Msa1354070:CDS
GATGGCTGATCTAGTGTGCT+TGG 0.520246 tig0014199:+14212 Msa1354070:CDS
TTCAAGAAACCTCCTTGCCA+TGG 0.522668 tig0014199:-14295 None:intergenic
CTCATCCAGCAGCAAAACCT+CGG 0.530773 tig0014199:-14070 None:intergenic
ACTGTCCCTTCAAAGAGAGC+AGG 0.531211 tig0014199:-13862 None:intergenic
ATATCCACAGAAAACATTGA+AGG 0.533483 tig0014199:+14114 Msa1354070:CDS
GATTCTTGTTCAACTTCATG+AGG 0.534306 tig0014199:-14140 None:intergenic
GCATAAGAATCAGATATGAC+CGG 0.535670 tig0014199:+13321 Msa1354070:exon
TCAGGTGCTGACCTCTCTGT+TGG 0.539593 tig0014199:+14003 Msa1354070:CDS
GAGATATGGTCCACAACTGA+GGG 0.540331 tig0014199:+13897 Msa1354070:CDS
AAAGCAGTAATAAATTAAGT+AGG 0.541139 tig0014199:-14384 None:intergenic
CATAAGAATCAGATATGACC+GGG 0.541830 tig0014199:+13322 Msa1354070:exon
CGTTGACATCCCAAAAGGTA+TGG 0.544258 tig0014199:+13675 Msa1354070:CDS
AGGAAGACGGAGGAGGAAGA+TGG 0.545744 tig0014199:-13769 None:intergenic
CTTATGCACATGTCAGTTGA+GGG 0.552433 tig0014199:-14467 None:intergenic
ATCATAGGTCCTAGTGGCAG+CGG 0.555290 tig0014199:+13706 Msa1354070:CDS
AAAGCTAACGGACGATGAGG+TGG 0.560900 tig0014199:+13924 Msa1354070:CDS
TCAGGGCATCACACTCATCA+TGG 0.562359 tig0014199:+14161 Msa1354070:CDS
ACACCACAAACAACCTCCCC+CGG 0.563771 tig0014199:-13340 None:intergenic
CATGGCGACCTTACGGCGGA+GGG 0.564019 tig0014199:-13827 None:intergenic
AAGCTAACGGACGATGAGGT+GGG 0.565601 tig0014199:+13925 Msa1354070:CDS
GCCATCGAGGAAGACGGAGG+AGG 0.565970 tig0014199:-13776 None:intergenic
AGCAGGGAGCTGAAAGAGCA+TGG 0.566720 tig0014199:-13845 None:intergenic
AAGGGCCTTGAATCGCCTCT+GGG 0.566748 tig0014199:+13744 Msa1354070:CDS
ATCACCGTTGACATCCCAAA+AGG 0.571203 tig0014199:+13670 Msa1354070:CDS
TCAAGAAACCTCCTTGCCAT+GGG 0.574475 tig0014199:-14294 None:intergenic
GAAACCTCCTTGCCATGGGA+TGG 0.578789 tig0014199:-14290 None:intergenic
TCATCCAGCAGCAAAACCTC+GGG 0.580881 tig0014199:-14069 None:intergenic
GCGATTCAAGGCCCTTAAGA+GGG 0.583783 tig0014199:-13737 None:intergenic
CATCAAGCAAATACAGAGGA+TGG 0.586777 tig0014199:+14194 Msa1354070:CDS
ATTCTTGTTCAACTTCATGA+GGG 0.590397 tig0014199:-14139 None:intergenic
GTCTACGCCATCGAGGAAGA+CGG 0.591517 tig0014199:-13782 None:intergenic
GCACTTGTTGTTGGATGTGG+AGG 0.595466 tig0014199:+13564 Msa1354070:CDS
AGCTAACGGACGATGAGGTG+GGG 0.596216 tig0014199:+13926 Msa1354070:CDS
GGGTGAGTTAGCTAGAGTCC+TGG 0.596970 tig0014199:-14049 None:intergenic
CTGTCCCTTCAAAGAGAGCA+GGG 0.599827 tig0014199:-13861 None:intergenic
ATGAAGTTGAACAAGAATCA+GGG 0.603528 tig0014199:+14144 Msa1354070:CDS
ACTTATGCACATGTCAGTTG+AGG 0.605159 tig0014199:-14468 None:intergenic
TGCACATGTCAGTTGAGGGA+GGG 0.615745 tig0014199:-14463 None:intergenic
CTCTCAAGCTCACCATCCCA+TGG 0.616507 tig0014199:+14278 Msa1354070:CDS
AAGCTCACCATCCCATGGCA+AGG 0.618991 tig0014199:+14283 Msa1354070:CDS
ATGCACATGTCAGTTGAGGG+AGG 0.622762 tig0014199:-14464 None:intergenic
TCTCTTTGAAGGGACAGTTG+CGG 0.623220 tig0014199:+13867 Msa1354070:CDS
GGGAAGCTTGAAATACTGAA+AGG 0.624623 tig0014199:+13646 Msa1354070:CDS
TGAGATATGGTCCACAACTG+AGG 0.636293 tig0014199:+13896 Msa1354070:CDS
GTTGGGATCATAGGTCCTAG+TGG 0.641842 tig0014199:+13700 Msa1354070:CDS
AGAGCATGGCGACCTTACGG+CGG 0.655313 tig0014199:-13831 None:intergenic
AATAAAGCTAACGGACGATG+AGG 0.656479 tig0014199:+13921 Msa1354070:CDS
GACTCTAGCTAACTCACCCG+AGG 0.668902 tig0014199:+14053 Msa1354070:CDS
ACTGAGGGGAATAAAGCTAA+CGG 0.669508 tig0014199:+13912 Msa1354070:CDS
CTCACCATCCCATGGCAAGG+AGG 0.678078 tig0014199:+14286 Msa1354070:CDS
AAATTAAGTAGGAACATATG+GGG 0.684870 tig0014199:-14373 None:intergenic
AGGAGGAAGATGGCTCCCAG+AGG 0.707366 tig0014199:-13759 None:intergenic
GGCGGAGGGAAAGAACGTCA+AGG 0.708049 tig0014199:-13813 None:intergenic
TTTGAGCCTGACCAACAGAG+AGG 0.709846 tig0014199:-14014 None:intergenic
ATAAGAATCAGATATGACCG+GGG 0.718253 tig0014199:+13323 Msa1354070:exon
TAAGAATCAGATATGACCGG+GGG 0.722529 tig0014199:+13324 Msa1354070:exon
AGATATGGTCCACAACTGAG+GGG 0.727081 tig0014199:+13898 Msa1354070:CDS
ATAGCATCAAGCAAATACAG+AGG 0.727972 tig0014199:+14190 Msa1354070:CDS
TACGCCATCGAGGAAGACGG+AGG 0.729016 tig0014199:-13779 None:intergenic
TACATATGTCTACGCCATCG+AGG 0.743214 tig0014199:-13789 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGATGAAATAAAATGAAA+TGG - tig0014199:13276-13295 None:intergenic 15.0%
!!! AGATTTTTTATCTTGATTTT+CGG - tig0014199:13607-13626 None:intergenic 15.0%
!! AGCAAATATATATATATATG+TGG - tig0014199:14415-14434 None:intergenic 15.0%
!! ATTGATGAAATAAAATGAAA+TGG - tig0014199:13276-13295 None:intergenic 15.0%
!!! AGATTTTTTATCTTGATTTT+CGG - tig0014199:13607-13626 None:intergenic 15.0%
!! AGCAAATATATATATATATG+TGG - tig0014199:14415-14434 None:intergenic 15.0%
!!! TCTTATGCTAGATTTTTTTA+AGG - tig0014199:13309-13328 None:intergenic 20.0%
!! TTCATATTCCTATATTCATA+TGG + tig0014199:13387-13406 Msa1354070:CDS 20.0%
!! AATGAGAATGTATTATTGTA+TGG - tig0014199:13416-13435 None:intergenic 20.0%
!! AAAAAATCTGAGAAAAGAAT+CGG + tig0014199:13618-13637 Msa1354070:CDS 20.0%
!! TAAATTAAGTAGGAACATAT+GGG - tig0014199:14377-14396 None:intergenic 20.0%
!! ATAAATTAAGTAGGAACATA+TGG - tig0014199:14378-14397 None:intergenic 20.0%
!! AAAGCAGTAATAAATTAAGT+AGG - tig0014199:14387-14406 None:intergenic 20.0%
!! TATATATTTGCTTGCTTTAA+AGG + tig0014199:14423-14442 Msa1354070:three_prime_UTR 20.0%
!!! TCTTATGCTAGATTTTTTTA+AGG - tig0014199:13309-13328 None:intergenic 20.0%
!! TTCATATTCCTATATTCATA+TGG + tig0014199:13387-13406 Msa1354070:CDS 20.0%
!! AATGAGAATGTATTATTGTA+TGG - tig0014199:13416-13435 None:intergenic 20.0%
!! AAAAAATCTGAGAAAAGAAT+CGG + tig0014199:13618-13637 Msa1354070:CDS 20.0%
!! TAAATTAAGTAGGAACATAT+GGG - tig0014199:14377-14396 None:intergenic 20.0%
!! ATAAATTAAGTAGGAACATA+TGG - tig0014199:14378-14397 None:intergenic 20.0%
!! AAAGCAGTAATAAATTAAGT+AGG - tig0014199:14387-14406 None:intergenic 20.0%
!! TATATATTTGCTTGCTTTAA+AGG + tig0014199:14423-14442 Msa1354070:three_prime_UTR 20.0%
! TTCTTCTTCTACTAATTTCA+AGG + tig0014199:13975-13994 Msa1354070:CDS 25.0%
! AAATTAAGTAGGAACATATG+GGG - tig0014199:14376-14395 None:intergenic 25.0%
! TTCTTCTTCTACTAATTTCA+AGG + tig0014199:13975-13994 Msa1354070:CDS 25.0%
! AAATTAAGTAGGAACATATG+GGG - tig0014199:14376-14395 None:intergenic 25.0%
TATGGTGACCATATGAATAT+AGG - tig0014199:13398-13417 None:intergenic 30.0%
ACTAATTTCAAGGATAAGTC+AGG + tig0014199:13985-14004 Msa1354070:CDS 30.0%
! TCAATGTTTTCTGTGGATAT+TGG - tig0014199:14114-14133 None:intergenic 30.0%
ATATCCACAGAAAACATTGA+AGG + tig0014199:14114-14133 Msa1354070:CDS 30.0%
ATTCTTGTTCAACTTCATGA+GGG - tig0014199:14142-14161 None:intergenic 30.0%
ATGAAGTTGAACAAGAATCA+GGG + tig0014199:14144-14163 Msa1354070:CDS 30.0%
TGCATAAGTGGTAATAAGAA+TGG + tig0014199:14482-14501 Msa1354070:three_prime_UTR 30.0%
TATGGTGACCATATGAATAT+AGG - tig0014199:13398-13417 None:intergenic 30.0%
ACTAATTTCAAGGATAAGTC+AGG + tig0014199:13985-14004 Msa1354070:CDS 30.0%
! TCAATGTTTTCTGTGGATAT+TGG - tig0014199:14114-14133 None:intergenic 30.0%
ATATCCACAGAAAACATTGA+AGG + tig0014199:14114-14133 Msa1354070:CDS 30.0%
ATTCTTGTTCAACTTCATGA+GGG - tig0014199:14142-14161 None:intergenic 30.0%
ATGAAGTTGAACAAGAATCA+GGG + tig0014199:14144-14163 Msa1354070:CDS 30.0%
TGCATAAGTGGTAATAAGAA+TGG + tig0014199:14482-14501 Msa1354070:three_prime_UTR 30.0%
GCATAAGAATCAGATATGAC+CGG + tig0014199:13321-13340 Msa1354070:exon 35.0%
CATAAGAATCAGATATGACC+GGG + tig0014199:13322-13341 Msa1354070:exon 35.0%
ATAAGAATCAGATATGACCG+GGG + tig0014199:13323-13342 Msa1354070:exon 35.0%
CTAAGACGGAAGACATAATT+GGG - tig0014199:13458-13477 None:intergenic 35.0%
CAACCTTTCTTTACCTAAGA+CGG - tig0014199:13472-13491 None:intergenic 35.0%
TGAGAAAAGAATCGGATGAT+GGG + tig0014199:13626-13645 Msa1354070:CDS 35.0%
ATTGGATCTAATGCACTAGT+AGG - tig0014199:14096-14115 None:intergenic 35.0%
GATTCTTGTTCAACTTCATG+AGG - tig0014199:14143-14162 None:intergenic 35.0%
CATGAAGTTGAACAAGAATC+AGG + tig0014199:14143-14162 Msa1354070:CDS 35.0%
ATAGCATCAAGCAAATACAG+AGG + tig0014199:14190-14209 Msa1354070:CDS 35.0%
TCACTTTCACTTTCACTTGT+TGG + tig0014199:14341-14360 Msa1354070:three_prime_UTR 35.0%
CACTTTCACTTTCACTTGTT+GGG + tig0014199:14342-14361 Msa1354070:three_prime_UTR 35.0%
GCATAAGAATCAGATATGAC+CGG + tig0014199:13321-13340 Msa1354070:exon 35.0%
CATAAGAATCAGATATGACC+GGG + tig0014199:13322-13341 Msa1354070:exon 35.0%
ATAAGAATCAGATATGACCG+GGG + tig0014199:13323-13342 Msa1354070:exon 35.0%
CTAAGACGGAAGACATAATT+GGG - tig0014199:13458-13477 None:intergenic 35.0%
CAACCTTTCTTTACCTAAGA+CGG - tig0014199:13472-13491 None:intergenic 35.0%
TGAGAAAAGAATCGGATGAT+GGG + tig0014199:13626-13645 Msa1354070:CDS 35.0%
ATTGGATCTAATGCACTAGT+AGG - tig0014199:14096-14115 None:intergenic 35.0%
GATTCTTGTTCAACTTCATG+AGG - tig0014199:14143-14162 None:intergenic 35.0%
CATGAAGTTGAACAAGAATC+AGG + tig0014199:14143-14162 Msa1354070:CDS 35.0%
ATAGCATCAAGCAAATACAG+AGG + tig0014199:14190-14209 Msa1354070:CDS 35.0%
TCACTTTCACTTTCACTTGT+TGG + tig0014199:14341-14360 Msa1354070:three_prime_UTR 35.0%
CACTTTCACTTTCACTTGTT+GGG + tig0014199:14342-14361 Msa1354070:three_prime_UTR 35.0%
TAAGAATCAGATATGACCGG+GGG + tig0014199:13324-13343 Msa1354070:exon 40.0%
ACGGAAGACATAATTGGGTT+GGG - tig0014199:13453-13472 None:intergenic 40.0%
CCTAAGACGGAAGACATAAT+TGG - tig0014199:13459-13478 None:intergenic 40.0%
CCAATTATGTCTTCCGTCTT+AGG + tig0014199:13456-13475 Msa1354070:CDS 40.0%
CTTCCGTCTTAGGTAAAGAA+AGG + tig0014199:13466-13485 Msa1354070:intron 40.0%
!! TTTGACAGAGCACTTGTTGT+TGG + tig0014199:13555-13574 Msa1354070:intron 40.0%
CTGAGAAAAGAATCGGATGA+TGG + tig0014199:13625-13644 Msa1354070:CDS 40.0%
GGGAAGCTTGAAATACTGAA+AGG + tig0014199:13646-13665 Msa1354070:CDS 40.0%
!!! CATACCTTTTGGGATGTCAA+CGG - tig0014199:13677-13696 None:intergenic 40.0%
! ATCCCAAAAGGTATGGTTGT+TGG + tig0014199:13682-13701 Msa1354070:CDS 40.0%
! TCCCAAAAGGTATGGTTGTT+GGG + tig0014199:13683-13702 Msa1354070:CDS 40.0%
! TCCCAACAACCATACCTTTT+GGG - tig0014199:13687-13706 None:intergenic 40.0%
! ATCCCAACAACCATACCTTT+TGG - tig0014199:13688-13707 None:intergenic 40.0%
ACTGAGGGGAATAAAGCTAA+CGG + tig0014199:13912-13931 Msa1354070:CDS 40.0%
! AATAAAGCTAACGGACGATG+AGG + tig0014199:13921-13940 Msa1354070:CDS 40.0%
CATCAAGCAAATACAGAGGA+TGG + tig0014199:14194-14213 Msa1354070:CDS 40.0%
! TGAGCTTGAGAGAGTTGATT+AGG - tig0014199:14270-14289 None:intergenic 40.0%
CTTATGCACATGTCAGTTGA+GGG - tig0014199:14470-14489 None:intergenic 40.0%
ACTTATGCACATGTCAGTTG+AGG - tig0014199:14471-14490 None:intergenic 40.0%
TCAACTGACATGTGCATAAG+TGG + tig0014199:14470-14489 Msa1354070:three_prime_UTR 40.0%
TAAGAATCAGATATGACCGG+GGG + tig0014199:13324-13343 Msa1354070:exon 40.0%
ACGGAAGACATAATTGGGTT+GGG - tig0014199:13453-13472 None:intergenic 40.0%
CCTAAGACGGAAGACATAAT+TGG - tig0014199:13459-13478 None:intergenic 40.0%
CCAATTATGTCTTCCGTCTT+AGG + tig0014199:13456-13475 Msa1354070:CDS 40.0%
CTTCCGTCTTAGGTAAAGAA+AGG + tig0014199:13466-13485 Msa1354070:intron 40.0%
!! TTTGACAGAGCACTTGTTGT+TGG + tig0014199:13555-13574 Msa1354070:intron 40.0%
CTGAGAAAAGAATCGGATGA+TGG + tig0014199:13625-13644 Msa1354070:CDS 40.0%
GGGAAGCTTGAAATACTGAA+AGG + tig0014199:13646-13665 Msa1354070:CDS 40.0%
!!! CATACCTTTTGGGATGTCAA+CGG - tig0014199:13677-13696 None:intergenic 40.0%
! ATCCCAAAAGGTATGGTTGT+TGG + tig0014199:13682-13701 Msa1354070:CDS 40.0%
! TCCCAAAAGGTATGGTTGTT+GGG + tig0014199:13683-13702 Msa1354070:CDS 40.0%
! TCCCAACAACCATACCTTTT+GGG - tig0014199:13687-13706 None:intergenic 40.0%
! ATCCCAACAACCATACCTTT+TGG - tig0014199:13688-13707 None:intergenic 40.0%
ACTGAGGGGAATAAAGCTAA+CGG + tig0014199:13912-13931 Msa1354070:CDS 40.0%
! AATAAAGCTAACGGACGATG+AGG + tig0014199:13921-13940 Msa1354070:CDS 40.0%
CATCAAGCAAATACAGAGGA+TGG + tig0014199:14194-14213 Msa1354070:CDS 40.0%
! TGAGCTTGAGAGAGTTGATT+AGG - tig0014199:14270-14289 None:intergenic 40.0%
CTTATGCACATGTCAGTTGA+GGG - tig0014199:14470-14489 None:intergenic 40.0%
ACTTATGCACATGTCAGTTG+AGG - tig0014199:14471-14490 None:intergenic 40.0%
TCAACTGACATGTGCATAAG+TGG + tig0014199:14470-14489 Msa1354070:three_prime_UTR 40.0%
TTGTTTGTGGTGTGGCTCTT+TGG + tig0014199:13350-13369 Msa1354070:CDS 45.0%
GACGGAAGACATAATTGGGT+TGG - tig0014199:13454-13473 None:intergenic 45.0%
!! AGAGCACTTGTTGTTGGATG+TGG + tig0014199:13561-13580 Msa1354070:intron 45.0%
ATCACCGTTGACATCCCAAA+AGG + tig0014199:13670-13689 Msa1354070:CDS 45.0%
CGTTGACATCCCAAAAGGTA+TGG + tig0014199:13675-13694 Msa1354070:CDS 45.0%
GGTATGGTTGTTGGGATCAT+AGG + tig0014199:13691-13710 Msa1354070:CDS 45.0%
TACATATGTCTACGCCATCG+AGG - tig0014199:13792-13811 None:intergenic 45.0%
! TCTCTTTGAAGGGACAGTTG+CGG + tig0014199:13867-13886 Msa1354070:CDS 45.0%
TGAGATATGGTCCACAACTG+AGG + tig0014199:13896-13915 Msa1354070:CDS 45.0%
GAGATATGGTCCACAACTGA+GGG + tig0014199:13897-13916 Msa1354070:CDS 45.0%
AGATATGGTCCACAACTGAG+GGG + tig0014199:13898-13917 Msa1354070:CDS 45.0%
!! AGCTTTATTCCCCTCAGTTG+TGG - tig0014199:13910-13929 None:intergenic 45.0%
!!! GGTGGGGAAGTTGCTTTTAA+TGG + tig0014199:13942-13961 Msa1354070:CDS 45.0%
!!! GGGGAAGTTGCTTTTAATGG+CGG + tig0014199:13945-13964 Msa1354070:CDS 45.0%
! GGCACCTTCAATGTTTTCTG+TGG - tig0014199:14121-14140 None:intergenic 45.0%
CTAGTGTGCTTGGTTGTTGA+TGG + tig0014199:14222-14241 Msa1354070:CDS 45.0%
TCAAGAAACCTCCTTGCCAT+GGG - tig0014199:14297-14316 None:intergenic 45.0%
TTCAAGAAACCTCCTTGCCA+TGG - tig0014199:14298-14317 None:intergenic 45.0%
TTGTTTGTGGTGTGGCTCTT+TGG + tig0014199:13350-13369 Msa1354070:CDS 45.0%
GACGGAAGACATAATTGGGT+TGG - tig0014199:13454-13473 None:intergenic 45.0%
!! AGAGCACTTGTTGTTGGATG+TGG + tig0014199:13561-13580 Msa1354070:intron 45.0%
ATCACCGTTGACATCCCAAA+AGG + tig0014199:13670-13689 Msa1354070:CDS 45.0%
CGTTGACATCCCAAAAGGTA+TGG + tig0014199:13675-13694 Msa1354070:CDS 45.0%
GGTATGGTTGTTGGGATCAT+AGG + tig0014199:13691-13710 Msa1354070:CDS 45.0%
TACATATGTCTACGCCATCG+AGG - tig0014199:13792-13811 None:intergenic 45.0%
! TCTCTTTGAAGGGACAGTTG+CGG + tig0014199:13867-13886 Msa1354070:CDS 45.0%
TGAGATATGGTCCACAACTG+AGG + tig0014199:13896-13915 Msa1354070:CDS 45.0%
GAGATATGGTCCACAACTGA+GGG + tig0014199:13897-13916 Msa1354070:CDS 45.0%
AGATATGGTCCACAACTGAG+GGG + tig0014199:13898-13917 Msa1354070:CDS 45.0%
!! AGCTTTATTCCCCTCAGTTG+TGG - tig0014199:13910-13929 None:intergenic 45.0%
!!! GGTGGGGAAGTTGCTTTTAA+TGG + tig0014199:13942-13961 Msa1354070:CDS 45.0%
!!! GGGGAAGTTGCTTTTAATGG+CGG + tig0014199:13945-13964 Msa1354070:CDS 45.0%
! GGCACCTTCAATGTTTTCTG+TGG - tig0014199:14121-14140 None:intergenic 45.0%
CTAGTGTGCTTGGTTGTTGA+TGG + tig0014199:14222-14241 Msa1354070:CDS 45.0%
TCAAGAAACCTCCTTGCCAT+GGG - tig0014199:14297-14316 None:intergenic 45.0%
TTCAAGAAACCTCCTTGCCA+TGG - tig0014199:14298-14317 None:intergenic 45.0%
!! GCACTTGTTGTTGGATGTGG+AGG + tig0014199:13564-13583 Msa1354070:CDS 50.0%
GTTGGGATCATAGGTCCTAG+TGG + tig0014199:13700-13719 Msa1354070:CDS 50.0%
ATCATAGGTCCTAGTGGCAG+CGG + tig0014199:13706-13725 Msa1354070:CDS 50.0%
CGGCAAGTCAACCCTCTTAA+GGG + tig0014199:13726-13745 Msa1354070:CDS 50.0%
GCGATTCAAGGCCCTTAAGA+GGG - tig0014199:13740-13759 None:intergenic 50.0%
! GAAAGAGCATGGCGACCTTA+CGG - tig0014199:13837-13856 None:intergenic 50.0%
AGCTCCCTGCTCTCTTTGAA+GGG + tig0014199:13857-13876 Msa1354070:CDS 50.0%
CTGTCCCTTCAAAGAGAGCA+GGG - tig0014199:13864-13883 None:intergenic 50.0%
ACTGTCCCTTCAAAGAGAGC+AGG - tig0014199:13865-13884 None:intergenic 50.0%
GTTGCGGACAACGTGAGATA+TGG + tig0014199:13883-13902 Msa1354070:CDS 50.0%
! AAAGCTAACGGACGATGAGG+TGG + tig0014199:13924-13943 Msa1354070:CDS 50.0%
! AAGCTAACGGACGATGAGGT+GGG + tig0014199:13925-13944 Msa1354070:CDS 50.0%
TTTGAGCCTGACCAACAGAG+AGG - tig0014199:14017-14036 None:intergenic 50.0%
CTCAAAGAGTTGCACTTGCC+AGG + tig0014199:14031-14050 Msa1354070:CDS 50.0%
TCATCCAGCAGCAAAACCTC+GGG - tig0014199:14072-14091 None:intergenic 50.0%
CTCATCCAGCAGCAAAACCT+CGG - tig0014199:14073-14092 None:intergenic 50.0%
! TCAGGGCATCACACTCATCA+TGG + tig0014199:14161-14180 Msa1354070:CDS 50.0%
GATGGCTGATCTAGTGTGCT+TGG + tig0014199:14212-14231 Msa1354070:CDS 50.0%
TGCACATGTCAGTTGAGGGA+GGG - tig0014199:14466-14485 None:intergenic 50.0%
ATGCACATGTCAGTTGAGGG+AGG - tig0014199:14467-14486 None:intergenic 50.0%
!! GCACTTGTTGTTGGATGTGG+AGG + tig0014199:13564-13583 Msa1354070:CDS 50.0%
GTTGGGATCATAGGTCCTAG+TGG + tig0014199:13700-13719 Msa1354070:CDS 50.0%
ATCATAGGTCCTAGTGGCAG+CGG + tig0014199:13706-13725 Msa1354070:CDS 50.0%
CGGCAAGTCAACCCTCTTAA+GGG + tig0014199:13726-13745 Msa1354070:CDS 50.0%
GCGATTCAAGGCCCTTAAGA+GGG - tig0014199:13740-13759 None:intergenic 50.0%
! GAAAGAGCATGGCGACCTTA+CGG - tig0014199:13837-13856 None:intergenic 50.0%
AGCTCCCTGCTCTCTTTGAA+GGG + tig0014199:13857-13876 Msa1354070:CDS 50.0%
CTGTCCCTTCAAAGAGAGCA+GGG - tig0014199:13864-13883 None:intergenic 50.0%
ACTGTCCCTTCAAAGAGAGC+AGG - tig0014199:13865-13884 None:intergenic 50.0%
GTTGCGGACAACGTGAGATA+TGG + tig0014199:13883-13902 Msa1354070:CDS 50.0%
! AAAGCTAACGGACGATGAGG+TGG + tig0014199:13924-13943 Msa1354070:CDS 50.0%
! AAGCTAACGGACGATGAGGT+GGG + tig0014199:13925-13944 Msa1354070:CDS 50.0%
TTTGAGCCTGACCAACAGAG+AGG - tig0014199:14017-14036 None:intergenic 50.0%
CTCAAAGAGTTGCACTTGCC+AGG + tig0014199:14031-14050 Msa1354070:CDS 50.0%
TCATCCAGCAGCAAAACCTC+GGG - tig0014199:14072-14091 None:intergenic 50.0%
CTCATCCAGCAGCAAAACCT+CGG - tig0014199:14073-14092 None:intergenic 50.0%
! TCAGGGCATCACACTCATCA+TGG + tig0014199:14161-14180 Msa1354070:CDS 50.0%
GATGGCTGATCTAGTGTGCT+TGG + tig0014199:14212-14231 Msa1354070:CDS 50.0%
TGCACATGTCAGTTGAGGGA+GGG - tig0014199:14466-14485 None:intergenic 50.0%
ATGCACATGTCAGTTGAGGG+AGG - tig0014199:14467-14486 None:intergenic 50.0%
GAATCAGATATGACCGGGGG+AGG + tig0014199:13327-13346 Msa1354070:exon 55.0%
ACACCACAAACAACCTCCCC+CGG - tig0014199:13343-13362 None:intergenic 55.0%
GCGGCAAGTCAACCCTCTTA+AGG + tig0014199:13725-13744 Msa1354070:CDS 55.0%
GGCGATTCAAGGCCCTTAAG+AGG - tig0014199:13741-13760 None:intergenic 55.0%
TAAGGGCCTTGAATCGCCTC+TGG + tig0014199:13743-13762 Msa1354070:CDS 55.0%
AAGGGCCTTGAATCGCCTCT+GGG + tig0014199:13744-13763 Msa1354070:CDS 55.0%
AGGAAGACGGAGGAGGAAGA+TGG - tig0014199:13772-13791 None:intergenic 55.0%
GTCTACGCCATCGAGGAAGA+CGG - tig0014199:13785-13804 None:intergenic 55.0%
AGCAGGGAGCTGAAAGAGCA+TGG - tig0014199:13848-13867 None:intergenic 55.0%
CAGCTCCCTGCTCTCTTTGA+AGG + tig0014199:13856-13875 Msa1354070:CDS 55.0%
! AGCTAACGGACGATGAGGTG+GGG + tig0014199:13926-13945 Msa1354070:CDS 55.0%
!! TCAGGTGCTGACCTCTCTGT+TGG + tig0014199:14003-14022 Msa1354070:CDS 55.0%
TGCTGACCTCTCTGTTGGTC+AGG + tig0014199:14008-14027 Msa1354070:CDS 55.0%
GGGTGAGTTAGCTAGAGTCC+TGG - tig0014199:14052-14071 None:intergenic 55.0%
GACTCTAGCTAACTCACCCG+AGG + tig0014199:14053-14072 Msa1354070:CDS 55.0%
CTCTCAAGCTCACCATCCCA+TGG + tig0014199:14278-14297 Msa1354070:CDS 55.0%
AAGCTCACCATCCCATGGCA+AGG + tig0014199:14283-14302 Msa1354070:CDS 55.0%
GAAACCTCCTTGCCATGGGA+TGG - tig0014199:14293-14312 None:intergenic 55.0%
GAATCAGATATGACCGGGGG+AGG + tig0014199:13327-13346 Msa1354070:exon 55.0%
ACACCACAAACAACCTCCCC+CGG - tig0014199:13343-13362 None:intergenic 55.0%
GCGGCAAGTCAACCCTCTTA+AGG + tig0014199:13725-13744 Msa1354070:CDS 55.0%
GGCGATTCAAGGCCCTTAAG+AGG - tig0014199:13741-13760 None:intergenic 55.0%
TAAGGGCCTTGAATCGCCTC+TGG + tig0014199:13743-13762 Msa1354070:CDS 55.0%
AAGGGCCTTGAATCGCCTCT+GGG + tig0014199:13744-13763 Msa1354070:CDS 55.0%
AGGAAGACGGAGGAGGAAGA+TGG - tig0014199:13772-13791 None:intergenic 55.0%
GTCTACGCCATCGAGGAAGA+CGG - tig0014199:13785-13804 None:intergenic 55.0%
AGCAGGGAGCTGAAAGAGCA+TGG - tig0014199:13848-13867 None:intergenic 55.0%
CAGCTCCCTGCTCTCTTTGA+AGG + tig0014199:13856-13875 Msa1354070:CDS 55.0%
! AGCTAACGGACGATGAGGTG+GGG + tig0014199:13926-13945 Msa1354070:CDS 55.0%
!! TCAGGTGCTGACCTCTCTGT+TGG + tig0014199:14003-14022 Msa1354070:CDS 55.0%
TGCTGACCTCTCTGTTGGTC+AGG + tig0014199:14008-14027 Msa1354070:CDS 55.0%
GGGTGAGTTAGCTAGAGTCC+TGG - tig0014199:14052-14071 None:intergenic 55.0%
GACTCTAGCTAACTCACCCG+AGG + tig0014199:14053-14072 Msa1354070:CDS 55.0%
CTCTCAAGCTCACCATCCCA+TGG + tig0014199:14278-14297 Msa1354070:CDS 55.0%
AAGCTCACCATCCCATGGCA+AGG + tig0014199:14283-14302 Msa1354070:CDS 55.0%
GAAACCTCCTTGCCATGGGA+TGG - tig0014199:14293-14312 None:intergenic 55.0%
TGACCGGGGGAGGTTGTTTG+TGG + tig0014199:13337-13356 Msa1354070:CDS 60.0%
GGGGGAGGTTGTTTGTGGTG+TGG + tig0014199:13342-13361 Msa1354070:CDS 60.0%
!! GTTGACTTGCCGCTGCCACT+AGG - tig0014199:13718-13737 None:intergenic 60.0%
TGGCTCCCAGAGGCGATTCA+AGG - tig0014199:13752-13771 None:intergenic 60.0%
AGGAGGAAGATGGCTCCCAG+AGG - tig0014199:13762-13781 None:intergenic 60.0%
TCCTCCTCCGTCTTCCTCGA+TGG + tig0014199:13775-13794 Msa1354070:CDS 60.0%
TACGCCATCGAGGAAGACGG+AGG - tig0014199:13782-13801 None:intergenic 60.0%
GGCGGAGGGAAAGAACGTCA+AGG - tig0014199:13816-13835 None:intergenic 60.0%
CGTTCTTTCCCTCCGCCGTA+AGG + tig0014199:13819-13838 Msa1354070:CDS 60.0%
AGAGCATGGCGACCTTACGG+CGG - tig0014199:13834-13853 None:intergenic 60.0%
! CTCACCCGAGGTTTTGCTGC+TGG + tig0014199:14065-14084 Msa1354070:CDS 60.0%
CTCACCATCCCATGGCAAGG+AGG + tig0014199:14286-14305 Msa1354070:CDS 60.0%
TGACCGGGGGAGGTTGTTTG+TGG + tig0014199:13337-13356 Msa1354070:CDS 60.0%
GGGGGAGGTTGTTTGTGGTG+TGG + tig0014199:13342-13361 Msa1354070:CDS 60.0%
!! GTTGACTTGCCGCTGCCACT+AGG - tig0014199:13718-13737 None:intergenic 60.0%
TGGCTCCCAGAGGCGATTCA+AGG - tig0014199:13752-13771 None:intergenic 60.0%
AGGAGGAAGATGGCTCCCAG+AGG - tig0014199:13762-13781 None:intergenic 60.0%
TCCTCCTCCGTCTTCCTCGA+TGG + tig0014199:13775-13794 Msa1354070:CDS 60.0%
TACGCCATCGAGGAAGACGG+AGG - tig0014199:13782-13801 None:intergenic 60.0%
GGCGGAGGGAAAGAACGTCA+AGG - tig0014199:13816-13835 None:intergenic 60.0%
CGTTCTTTCCCTCCGCCGTA+AGG + tig0014199:13819-13838 Msa1354070:CDS 60.0%
AGAGCATGGCGACCTTACGG+CGG - tig0014199:13834-13853 None:intergenic 60.0%
! CTCACCCGAGGTTTTGCTGC+TGG + tig0014199:14065-14084 Msa1354070:CDS 60.0%
CTCACCATCCCATGGCAAGG+AGG + tig0014199:14286-14305 Msa1354070:CDS 60.0%
GCCATCGAGGAAGACGGAGG+AGG - tig0014199:13779-13798 None:intergenic 65.0%
CATGGCGACCTTACGGCGGA+GGG - tig0014199:13830-13849 None:intergenic 65.0%
GCCATCGAGGAAGACGGAGG+AGG - tig0014199:13779-13798 None:intergenic 65.0%
CATGGCGACCTTACGGCGGA+GGG - tig0014199:13830-13849 None:intergenic 65.0%
GCATGGCGACCTTACGGCGG+AGG - tig0014199:13831-13850 None:intergenic 70.0%
GCATGGCGACCTTACGGCGG+AGG - tig0014199:13831-13850 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0014199 gene 13256 14507 13256 ID=Msa1354070;Name=Msa1354070
tig0014199 mRNA 13256 14507 13256 ID=Msa1354070-mRNA-1;Parent=Msa1354070;Name=Msa1354070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=80|1|1|1|1|1|2|178|302
tig0014199 exon 13256 13477 13256 ID=Msa1354070-mRNA-1:exon:8928;Parent=Msa1354070-mRNA-1
tig0014199 exon 13563 14507 13563 ID=Msa1354070-mRNA-1:exon:8929;Parent=Msa1354070-mRNA-1
tig0014199 five_prime_UTR 13256 13335 13256 ID=Msa1354070-mRNA-1:five_prime_utr;Parent=Msa1354070-mRNA-1
tig0014199 CDS 13336 13477 13336 ID=Msa1354070-mRNA-1:cds;Parent=Msa1354070-mRNA-1
tig0014199 CDS 13563 14329 13563 ID=Msa1354070-mRNA-1:cds;Parent=Msa1354070-mRNA-1
tig0014199 three_prime_UTR 14330 14507 14330 ID=Msa1354070-mRNA-1:three_prime_utr;Parent=Msa1354070-mRNA-1
Gene Sequence

>Msa1354070

ATGACCGGGGGAGGTTGTTTGTGGTGTGGCTCTTTGGTTTCACATAAAAAATTCATATTCCTATATTCATATGGTCACCATACAATAATACATTCTCATTCTCTCAATCACACGCCCAACCCAATTATGTCTTCCGTCTTAGAGCACTTGTTGTTGGATGTGGAGGAGCAGCAGCAGCAACAACCGAAAATCAAGATAAAAAATCTGAGAAAAGAATCGGATGATGGGAAGCTTGAAATACTGAAAGGCATCACCGTTGACATCCCAAAAGGTATGGTTGTTGGGATCATAGGTCCTAGTGGCAGCGGCAAGTCAACCCTCTTAAGGGCCTTGAATCGCCTCTGGGAGCCATCTTCCTCCTCCGTCTTCCTCGATGGCGTAGACATATGTAACCTTGACGTTCTTTCCCTCCGCCGTAAGGTCGCCATGCTCTTTCAGCTCCCTGCTCTCTTTGAAGGGACAGTTGCGGACAACGTGAGATATGGTCCACAACTGAGGGGAATAAAGCTAACGGACGATGAGGTGGGGAAGTTGCTTTTAATGGCGGATCTAGATTCTTCTTCTACTAATTTCAAGGATAAGTCAGGTGCTGACCTCTCTGTTGGTCAGGCTCAAAGAGTTGCACTTGCCAGGACTCTAGCTAACTCACCCGAGGTTTTGCTGCTGGATGAGCCTACTAGTGCATTAGATCCAATATCCACAGAAAACATTGAAGGTGCCCTCATGAAGTTGAACAAGAATCAGGGCATCACACTCATCATGGTTTCTCATAGCATCAAGCAAATACAGAGGATGGCTGATCTAGTGTGCTTGGTTGTTGATGGTCAAATTGTTGAAGTTCTTAAGCCTAATCAACTCTCTCAAGCTCACCATCCCATGGCAAGGAGGTTTCTTGAACTCAGTTCTTAA
Protein sequence

>Msa1354070

MTGGGCLWCGSLVSHKKFIFLYSYGHHTIIHSHSLNHTPNPIMSSVLEHLLLDVEEQQQQQPKIKIKNLRKESDDGKLEILKGITVDIPKGMVVGIIGPSGSGKSTLLRALNRLWEPSSSSVFLDGVDICNLDVLSLRRKVAMLFQLPALFEGTVADNVRYGPQLRGIKLTDDEVGKLLLMADLDSSSTNFKDKSGADLSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEGALMKLNKNQGITLIMVSHSIKQIQRMADLVCLVVDGQIVEVLKPNQLSQAHHPMARRFLELSS*