AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0929710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0929710 MtrunA17_Chr8g0393151 93.822 259 12 3 43 301 1 255 5.11e-173 479
Msa0929710 MtrunA17_Chr3g0123411 35.514 214 124 4 79 285 922 1128 2.38e-34 132
Msa0929710 MtrunA17_Chr3g0123411 32.328 232 135 5 79 299 266 486 6.48e-21 93.2
Msa0929710 MtrunA17_Chr2g0285191 36.150 213 114 5 77 278 413 614 2.40e-34 132
Msa0929710 MtrunA17_Chr2g0285191 35.577 208 123 5 77 278 1068 1270 1.03e-29 119
Msa0929710 MtrunA17_Chr2g0285301 35.681 213 115 5 77 278 379 580 6.55e-34 131
Msa0929710 MtrunA17_Chr2g0285301 33.493 209 126 4 77 278 1036 1238 8.83e-29 116
Msa0929710 MtrunA17_Chr5g0410921 37.500 208 114 5 79 278 1006 1205 2.00e-33 129
Msa0929710 MtrunA17_Chr5g0410921 36.715 207 117 4 79 278 373 572 1.09e-32 127
Msa0929710 MtrunA17_Chr6g0481921 33.333 234 134 5 77 299 286 508 4.32e-33 129
Msa0929710 MtrunA17_Chr6g0481921 33.621 232 141 5 77 301 942 1167 6.12e-31 122
Msa0929710 MtrunA17_Chr2g0285311 34.742 213 117 5 77 278 384 585 1.78e-32 127
Msa0929710 MtrunA17_Chr2g0285311 34.259 216 129 4 77 285 1040 1249 4.82e-31 122
Msa0929710 MtrunA17_Chr1g0156821 35.185 216 126 5 77 285 1009 1217 1.03e-31 124
Msa0929710 MtrunA17_Chr1g0156821 31.905 210 123 4 79 278 389 588 2.29e-20 91.7
Msa0929710 MtrunA17_Chr3g0119381 35.545 211 114 6 79 278 416 615 1.04e-31 124
Msa0929710 MtrunA17_Chr3g0119381 33.816 207 130 3 76 278 1071 1274 5.13e-26 108
Msa0929710 MtrunA17_Chr7g0233901 36.279 215 121 6 79 285 374 580 2.79e-31 123
Msa0929710 MtrunA17_Chr7g0233901 33.810 210 128 4 77 279 1010 1215 8.46e-29 116
Msa0929710 MtrunA17_Chr4g0061601 34.783 207 122 5 79 278 404 604 8.50e-31 121
Msa0929710 MtrunA17_Chr8g0344651 33.981 206 130 3 76 278 1256 1458 1.43e-30 121
Msa0929710 MtrunA17_Chr8g0344651 33.486 218 123 5 79 285 615 821 5.57e-26 108
Msa0929710 MtrunA17_Chr5g0433051 37.019 208 117 4 78 278 480 680 3.15e-30 120
Msa0929710 MtrunA17_Chr6g0452061 36.232 207 120 4 79 278 546 747 4.55e-30 119
Msa0929710 MtrunA17_Chr6g0452061 37.143 105 63 2 195 299 18 119 2.07e-11 64.7
Msa0929710 MtrunA17_Chr1g0178481 34.468 235 134 5 63 286 380 605 6.27e-30 119
Msa0929710 MtrunA17_Chr6g0451881 36.232 207 120 4 79 278 1024 1225 7.35e-30 119
Msa0929710 MtrunA17_Chr6g0451881 33.636 220 124 4 79 287 378 586 1.56e-27 112
Msa0929710 MtrunA17_Chr7g0264631 31.674 221 137 4 77 290 1096 1309 7.44e-30 119
Msa0929710 MtrunA17_Chr7g0264631 33.962 212 130 5 79 285 443 649 1.55e-28 115
Msa0929710 MtrunA17_Chr6g0452171 36.792 212 112 6 79 278 1037 1238 8.74e-30 119
Msa0929710 MtrunA17_Chr6g0452171 31.897 232 136 4 79 299 378 598 9.90e-28 113
Msa0929710 MtrunA17_Chr4g0069401 32.018 228 141 4 79 299 390 610 1.14e-29 119
Msa0929710 MtrunA17_Chr4g0069401 32.035 231 149 4 52 278 1025 1251 1.27e-26 110
Msa0929710 MtrunA17_Chr1g0194001 34.466 206 128 3 77 278 162 364 1.63e-29 115
Msa0929710 MtrunA17_Chr4g0069351 34.123 211 117 6 79 278 395 594 1.68e-29 118
Msa0929710 MtrunA17_Chr4g0069351 35.407 209 122 4 77 278 1051 1253 1.04e-28 115
Msa0929710 MtrunA17_Chr6g0452041 36.792 212 112 6 79 278 1036 1237 2.21e-29 118
Msa0929710 MtrunA17_Chr6g0452041 31.897 232 136 4 79 299 378 598 2.75e-27 112
Msa0929710 MtrunA17_Chr6g0452071 35.407 209 123 4 77 278 228 431 2.51e-29 116
Msa0929710 MtrunA17_Chr6g0452111 35.266 207 122 4 79 278 1035 1236 3.06e-29 117
Msa0929710 MtrunA17_Chr6g0452111 30.597 268 146 6 61 299 349 605 1.94e-27 112
Msa0929710 MtrunA17_Chr1g0180601 32.743 226 129 6 77 291 1070 1283 5.24e-29 117
Msa0929710 MtrunA17_Chr1g0180601 33.796 216 131 6 76 285 413 622 5.44e-29 117
Msa0929710 MtrunA17_Chr7g0227391 34.951 206 128 5 77 278 440 643 5.60e-29 116
Msa0929710 MtrunA17_Chr4g0069361 33.649 211 118 6 79 278 395 594 8.93e-29 116
Msa0929710 MtrunA17_Chr4g0069361 35.407 209 122 4 77 278 1051 1253 1.34e-28 115
Msa0929710 MtrunA17_Chr1g0193991 34.951 206 127 3 77 278 1059 1261 1.11e-28 115
Msa0929710 MtrunA17_Chr1g0193991 32.020 203 132 3 79 278 406 605 2.64e-28 114
Msa0929710 MtrunA17_Chr1g0194031 31.683 202 132 3 79 277 401 599 1.17e-28 115
Msa0929710 MtrunA17_Chr4g0069411 33.649 211 118 5 79 278 413 612 1.37e-28 115
Msa0929710 MtrunA17_Chr4g0069411 35.407 209 122 4 77 278 1065 1267 3.68e-28 114
Msa0929710 MtrunA17_Chr6g0452141 35.266 207 122 4 79 278 1034 1235 1.49e-28 115
Msa0929710 MtrunA17_Chr6g0452141 31.897 232 136 4 79 299 379 599 1.35e-27 112
Msa0929710 MtrunA17_Chr6g0486841 32.510 243 146 6 62 296 1001 1233 1.86e-28 115
Msa0929710 MtrunA17_Chr6g0486841 32.710 214 130 4 79 285 376 582 3.24e-23 100
Msa0929710 MtrunA17_Chr6g0453051 34.211 228 136 4 79 299 1025 1245 1.90e-28 115
Msa0929710 MtrunA17_Chr6g0453051 35.749 207 119 4 79 278 380 579 4.79e-27 111
Msa0929710 MtrunA17_Chr5g0412741 38.542 192 111 5 92 278 486 675 2.14e-28 114
Msa0929710 MtrunA17_Chr4g0041871 31.140 228 138 5 79 294 1023 1243 2.85e-28 114
Msa0929710 MtrunA17_Chr4g0041871 32.381 210 136 3 79 285 360 566 2.78e-26 108
Msa0929710 MtrunA17_Chr3g0138211 31.754 211 122 5 79 278 413 612 6.80e-28 113
Msa0929710 MtrunA17_Chr3g0138211 34.737 190 117 3 93 278 1069 1255 4.57e-24 102
Msa0929710 MtrunA17_Chr6g0451911 32.727 220 126 4 79 287 378 586 1.08e-27 113
Msa0929710 MtrunA17_Chr6g0451911 33.816 207 124 4 79 278 1032 1232 1.38e-27 112
Msa0929710 MtrunA17_Chr4g0039821 35.885 209 121 4 77 278 1049 1251 2.60e-27 112
Msa0929710 MtrunA17_Chr4g0039821 32.020 203 132 3 79 278 393 592 1.12e-26 110
Msa0929710 MtrunA17_Chr3g0128381 32.203 236 142 5 79 301 407 637 4.74e-27 110
Msa0929710 MtrunA17_Chr8g0341851 33.636 220 123 6 79 287 1236 1443 5.23e-27 111
Msa0929710 MtrunA17_Chr8g0341851 28.054 221 134 9 63 277 606 807 4.69e-12 66.6
Msa0929710 MtrunA17_Chr5g0433071 36.058 208 119 4 78 278 482 682 9.26e-27 110
Msa0929710 MtrunA17_Chr8g0376961 33.195 241 146 6 56 289 1191 1423 1.65e-26 109
Msa0929710 MtrunA17_Chr8g0376961 28.571 196 120 6 87 278 612 791 4.19e-14 72.8
Msa0929710 MtrunA17_Chr6g0474071 33.953 215 120 5 77 279 228 432 1.81e-26 108
Msa0929710 MtrunA17_Chr3g0085281 32.911 237 144 5 56 285 1214 1442 2.31e-26 109
Msa0929710 MtrunA17_Chr3g0085281 29.064 203 117 7 84 278 614 797 8.34e-12 65.9
Msa0929710 MtrunA17_Chr8g0366481 37.019 208 115 5 79 278 403 602 3.47e-26 108
Msa0929710 MtrunA17_Chr6g0452081 34.409 186 101 3 88 262 49 224 6.55e-26 102
Msa0929710 MtrunA17_Chr8g0337191 31.878 229 143 5 63 285 1239 1460 2.07e-25 106
Msa0929710 MtrunA17_Chr8g0341751 31.915 235 135 7 79 301 1060 1281 4.02e-25 105
Msa0929710 MtrunA17_Chr8g0337121 31.441 229 144 5 63 285 1259 1480 4.34e-25 105
Msa0929710 MtrunA17_Chr8g0341761 32.609 230 140 8 79 301 1221 1442 4.96e-25 105
Msa0929710 MtrunA17_Chr8g0353781 32.051 234 136 8 79 301 1227 1448 5.67e-25 105
Msa0929710 MtrunA17_Chr8g0353781 26.471 204 127 7 80 278 617 802 3.32e-12 67.0
Msa0929710 MtrunA17_Chr6g0472531 31.837 245 150 7 62 298 1178 1413 6.20e-25 105
Msa0929710 MtrunA17_Chr6g0472531 29.545 220 133 8 63 278 573 774 7.25e-14 72.0
Msa0929710 MtrunA17_Chr8g0359291 31.984 247 147 8 62 298 409 644 8.95e-25 104
Msa0929710 MtrunA17_Chr8g0353541 31.489 235 136 7 79 301 844 1065 1.66e-24 103
Msa0929710 MtrunA17_Chr6g0463121 31.048 248 148 6 62 298 1227 1462 4.47e-24 102
Msa0929710 MtrunA17_Chr6g0463121 27.083 240 144 8 63 292 622 840 7.15e-12 66.2
Msa0929710 MtrunA17_Chr6g0463141 32.389 247 146 8 62 298 1252 1487 1.07e-23 101
Msa0929710 MtrunA17_Chr2g0295901 30.894 246 155 7 63 301 1258 1495 1.50e-23 100
Msa0929710 MtrunA17_Chr6g0463391 31.760 233 139 5 62 285 413 634 1.52e-23 100
Msa0929710 MtrunA17_Chr8g0341811 31.197 234 138 8 79 301 1048 1269 1.86e-23 100
Msa0929710 MtrunA17_Chr1g0183191 30.864 243 152 7 63 299 1284 1516 2.43e-23 100
Msa0929710 MtrunA17_Chr1g0183191 30.233 215 125 9 80 288 661 856 4.73e-11 63.5
Msa0929710 MtrunA17_Chr6g0463131 30.612 245 153 7 62 298 1228 1463 2.94e-23 100
Msa0929710 MtrunA17_Chr6g0463131 29.130 230 135 10 63 285 623 831 4.92e-12 66.6
Msa0929710 MtrunA17_Chr5g0412721 32.407 216 127 5 79 285 1262 1467 3.69e-23 99.8
Msa0929710 MtrunA17_Chr5g0412721 29.268 205 120 9 80 278 637 822 3.79e-11 63.9
Msa0929710 MtrunA17_Chr8g0341801 30.303 231 144 6 79 301 203 424 3.92e-23 98.6
Msa0929710 MtrunA17_Chr6g0463151 30.612 245 153 7 62 298 1045 1280 4.02e-23 99.8
Msa0929710 MtrunA17_Chr6g0463151 27.586 203 126 7 80 278 456 641 3.12e-11 64.3
Msa0929710 MtrunA17_Chr5g0412941 31.034 232 143 5 62 285 84 306 1.24e-22 95.9
Msa0929710 MtrunA17_Chr3g0101441 31.651 218 126 6 79 285 1078 1283 1.65e-22 97.8
Msa0929710 MtrunA17_Chr3g0101441 29.767 215 120 10 80 285 450 642 1.28e-11 65.5
Msa0929710 MtrunA17_Chr6g0463181 30.204 245 154 7 62 298 1211 1446 1.78e-22 97.8
Msa0929710 MtrunA17_Chr6g0463181 27.273 220 138 8 63 278 609 810 1.01e-11 65.9
Msa0929710 MtrunA17_Chr6g0463211 31.760 233 139 5 62 285 1299 1520 1.87e-22 97.8
Msa0929710 MtrunA17_Chr6g0463211 26.749 243 134 9 59 276 636 859 4.09e-11 63.9
Msa0929710 MtrunA17_Chr7g0249091 30.041 243 146 7 75 296 96 335 3.26e-22 95.1
Msa0929710 MtrunA17_Chr3g0101471 30.841 214 133 5 79 285 1076 1281 5.05e-22 96.7
Msa0929710 MtrunA17_Chr7g0262191 30.041 243 154 7 63 299 1284 1516 6.89e-22 96.3
Msa0929710 MtrunA17_Chr2g0295911 31.034 232 141 7 63 285 1261 1482 7.69e-22 95.9
Msa0929710 MtrunA17_Chr1g0195691 32.365 241 148 4 60 293 1270 1502 1.46e-21 95.1
Msa0929710 MtrunA17_Chr1g0195691 28.251 223 127 9 73 285 661 860 3.43e-12 67.0
Msa0929710 MtrunA17_Chr8g0363771 30.870 230 144 6 63 285 1258 1479 1.74e-21 94.7
Msa0929710 MtrunA17_Chr2g0295921 30.870 230 144 6 63 285 1273 1494 1.77e-21 94.7
Msa0929710 MtrunA17_Chr3g0101461 32.558 215 128 8 79 285 1078 1283 3.39e-21 94.0
Msa0929710 MtrunA17_Chr3g0101461 29.767 215 120 10 80 285 450 642 3.51e-11 63.9
Msa0929710 MtrunA17_Chr5g0445741 30.472 233 143 5 62 285 1250 1472 5.06e-21 93.6
Msa0929710 MtrunA17_Chr6g0484351 30.952 252 149 7 62 301 411 649 5.08e-21 93.2
Msa0929710 MtrunA17_Chr1g0202221 30.043 233 144 5 62 285 1134 1356 6.99e-21 93.2
Msa0929710 MtrunA17_Chr1g0202221 28.507 221 135 9 63 278 620 822 1.25e-12 68.6
Msa0929710 MtrunA17_Chr2g0333911 33.043 230 136 7 80 301 791 1010 1.56e-20 92.0
Msa0929710 MtrunA17_Chr2g0333911 27.830 212 125 6 73 276 171 362 1.16e-11 65.5
Msa0929710 MtrunA17_Chr3g0101481 30.374 214 134 4 79 285 1271 1476 2.66e-20 91.3
Msa0929710 MtrunA17_Chr3g0101481 31.776 214 119 10 79 285 641 834 7.58e-13 68.9
Msa0929710 MtrunA17_Chr1g0212701 28.846 208 139 4 76 279 414 616 3.05e-20 91.3
Msa0929710 MtrunA17_Chr1g0212701 29.469 207 133 5 79 278 1164 1364 6.74e-16 78.2
Msa0929710 MtrunA17_Chr5g0445671 30.172 232 145 5 62 285 859 1081 3.88e-20 90.9
Msa0929710 MtrunA17_Chr5g0445671 29.469 207 117 9 80 278 257 442 5.26e-12 66.6
Msa0929710 MtrunA17_Chr7g0222781 28.708 209 138 5 76 279 420 622 4.56e-20 90.9
Msa0929710 MtrunA17_Chr7g0222781 29.952 207 132 5 79 278 1172 1372 4.05e-16 79.0
Msa0929710 MtrunA17_Chr6g0463201 29.915 234 142 6 62 285 1233 1454 7.14e-20 90.1
Msa0929710 MtrunA17_Chr6g0463201 28.514 249 136 11 54 278 598 828 3.41e-13 70.1
Msa0929710 MtrunA17_Chr5g0445701 30.688 189 119 4 79 261 12 194 1.09e-19 86.3
Msa0929710 MtrunA17_Chr3g0130211 29.528 254 151 8 34 277 5 240 1.75e-19 85.9
Msa0929710 MtrunA17_Chr3g0128391 29.747 158 89 3 29 185 239 375 2.80e-18 85.1
Msa0929710 MtrunA17_Chr3g0128391 41.860 86 47 2 193 278 449 531 4.88e-11 63.2
Msa0929710 MtrunA17_Chr7g0257341 25.974 231 158 6 63 285 1458 1683 1.15e-17 83.6
Msa0929710 MtrunA17_Chr7g0257341 26.613 248 155 10 42 276 532 765 5.61e-11 63.5
Msa0929710 MtrunA17_Chr6g0471281 31.325 249 140 10 62 295 1228 1460 9.72e-17 80.9
Msa0929710 MtrunA17_Chr6g0471281 27.442 215 125 8 80 285 639 831 2.17e-11 64.7
Msa0929710 MtrunA17_Chr3g0093091 25.822 213 142 6 80 285 638 841 4.11e-16 79.0
Msa0929710 MtrunA17_Chr3g0080941 30.332 211 142 4 79 287 1251 1458 1.03e-15 77.8
Msa0929710 MtrunA17_Chr3g0080941 29.104 268 155 11 47 298 591 839 4.46e-14 72.8
Msa0929710 MtrunA17_Chr2g0316301 32.710 214 127 9 75 277 69 276 1.17e-15 77.4
Msa0929710 MtrunA17_Chr4g0060431 25.446 224 148 8 70 285 609 821 1.23e-15 77.4
Msa0929710 MtrunA17_Chr8g0366451 36.842 114 68 1 79 192 332 441 2.03e-15 76.3
Msa0929710 MtrunA17_Chr4g0060501 23.684 228 155 7 70 289 624 840 4.06e-15 75.9
Msa0929710 MtrunA17_Chr4g0060421 26.339 224 146 9 70 285 144 356 7.73e-15 74.7
Msa0929710 MtrunA17_Chr2g0285731 29.464 224 135 8 61 278 613 819 1.53e-14 74.3
Msa0929710 MtrunA17_Chr2g0285731 29.767 215 134 4 79 285 1253 1458 2.01e-13 70.9
Msa0929710 MtrunA17_Chr3g0080981 28.352 261 152 9 35 278 578 820 2.55e-14 73.6
Msa0929710 MtrunA17_Chr3g0080981 28.169 213 144 4 79 287 1250 1457 9.85e-14 71.6
Msa0929710 MtrunA17_Chr5g0411621 29.279 222 141 7 69 277 36 254 2.57e-14 73.2
Msa0929710 MtrunA17_Chr8g0371961 35.632 87 56 0 79 165 18 104 3.75e-14 67.8
Msa0929710 MtrunA17_Chr4g0060401 23.111 225 152 7 70 285 622 834 3.88e-14 72.8
Msa0929710 MtrunA17_Chr4g0060471 27.179 195 132 5 95 285 1 189 9.57e-14 70.1
Msa0929710 MtrunA17_Chr8g0393191 28.511 235 145 9 68 285 53 281 1.32e-13 71.2
Msa0929710 MtrunA17_Chr8g0384391 27.451 255 164 8 30 277 17 257 1.13e-12 68.2
Msa0929710 MtrunA17_Chr6g0452051 37.647 85 53 0 79 163 299 383 1.43e-12 67.8
Msa0929710 MtrunA17_Chr7g0263351 28.509 228 147 6 74 290 122 344 4.09e-12 66.6
Msa0929710 MtrunA17_Chr8g0371361 29.952 207 110 5 78 256 167 366 8.12e-12 65.9
Msa0929710 MtrunA17_Chr7g0224741 26.291 213 145 6 63 266 53 262 2.23e-11 63.2
Msa0929710 MtrunA17_Chr1g0176451 32.000 200 119 8 68 256 12 205 6.38e-11 62.8
Msa0929710 MtrunA17_Chr1g0181461 28.230 209 114 5 78 257 13 214 8.06e-11 62.8
Msa0929710 MtrunA17_Chr1g0198931 27.536 207 136 6 78 274 106 308 8.30e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0929710 AT1G67940.1 70.428 257 71 3 45 301 12 263 1.39e-127 364
Msa0929710 AT5G46540.1 36.150 213 114 5 77 278 372 573 1.73e-35 136
Msa0929710 AT5G46540.1 33.493 209 126 5 77 278 1020 1222 1.98e-26 109
Msa0929710 AT1G27940.2 37.915 211 115 5 76 278 804 1006 1.11e-33 130
Msa0929710 AT1G27940.2 34.135 208 123 4 79 279 174 374 1.60e-28 115
Msa0929710 AT1G27940.1 37.915 211 115 5 76 278 1018 1220 2.38e-33 130
Msa0929710 AT1G27940.1 34.300 207 122 4 79 278 388 587 3.04e-28 115
Msa0929710 AT4G18050.2 35.211 213 116 5 77 278 380 581 7.97e-33 128
Msa0929710 AT4G18050.2 32.057 209 129 4 77 278 1018 1220 1.89e-26 109
Msa0929710 AT4G18050.1 35.211 213 116 5 77 278 370 571 8.26e-33 128
Msa0929710 AT4G18050.1 32.057 209 129 4 77 278 1008 1210 1.96e-26 109
Msa0929710 AT4G25960.1 35.749 207 119 4 79 278 418 617 7.42e-32 125
Msa0929710 AT4G25960.1 32.850 207 125 4 79 278 1047 1246 4.10e-27 111
Msa0929710 AT3G28390.1 37.561 205 120 4 79 278 997 1198 4.27e-31 123
Msa0929710 AT3G28390.1 34.783 207 121 4 79 278 364 563 3.77e-29 117
Msa0929710 AT4G01830.2 32.766 235 136 5 76 299 133 356 4.41e-31 123
Msa0929710 AT4G01830.2 33.493 209 127 4 77 278 766 969 1.19e-27 113
Msa0929710 AT4G01830.1 32.766 235 136 5 76 299 367 590 7.00e-31 122
Msa0929710 AT4G01830.1 33.493 209 127 4 77 278 1000 1203 2.02e-27 112
Msa0929710 AT5G58270.1 38.462 208 114 4 78 278 493 693 8.30e-31 122
Msa0929710 AT1G02530.1 33.333 204 130 3 78 278 384 584 9.65e-31 122
Msa0929710 AT1G02530.1 33.493 209 128 4 77 278 1042 1246 6.21e-27 111
Msa0929710 AT1G28010.1 35.437 206 127 3 76 278 1020 1222 1.11e-30 122
Msa0929710 AT1G28010.1 35.266 207 120 4 79 278 389 588 1.89e-29 118
Msa0929710 AT1G02530.2 33.333 204 130 3 78 278 384 584 1.24e-30 122
Msa0929710 AT1G02520.1 33.333 204 130 3 78 278 397 597 2.23e-30 121
Msa0929710 AT1G02520.1 33.971 209 127 4 77 278 1047 1251 4.81e-27 111
Msa0929710 AT1G02520.2 33.333 204 130 3 78 278 397 597 2.23e-30 121
Msa0929710 AT1G02520.2 33.971 209 127 4 77 278 1047 1251 4.81e-27 111
Msa0929710 AT1G02520.3 33.333 204 130 3 78 278 397 597 2.23e-30 121
Msa0929710 AT1G02520.3 33.971 209 127 4 77 278 1047 1251 4.81e-27 111
Msa0929710 AT3G28380.1 37.073 205 121 4 79 278 1012 1213 4.18e-30 120
Msa0929710 AT3G28380.1 34.783 207 121 4 79 278 376 575 1.10e-29 119
Msa0929710 AT2G47000.4 33.019 212 120 5 78 278 400 600 4.36e-30 120
Msa0929710 AT2G47000.3 33.019 212 120 5 78 278 400 600 4.93e-30 120
Msa0929710 AT2G47000.7 33.019 212 120 5 78 278 400 600 4.93e-30 120
Msa0929710 AT2G47000.6 33.019 212 120 5 78 278 400 600 4.95e-30 120
Msa0929710 AT2G47000.6 35.185 216 127 4 77 285 1057 1266 2.16e-28 115
Msa0929710 AT2G47000.5 33.019 212 120 5 78 278 400 600 4.95e-30 120
Msa0929710 AT2G47000.5 35.185 216 127 4 77 285 1057 1266 2.16e-28 115
Msa0929710 AT2G47000.1 33.019 212 120 5 78 278 400 600 4.95e-30 120
Msa0929710 AT2G47000.1 35.185 216 127 4 77 285 1057 1266 2.16e-28 115
Msa0929710 AT2G47000.2 33.019 212 120 5 78 278 400 600 5.44e-30 120
Msa0929710 AT2G47000.2 37.647 85 53 0 77 161 1057 1141 6.59e-12 66.6
Msa0929710 AT3G62150.3 33.491 212 119 5 78 278 419 619 6.98e-30 119
Msa0929710 AT3G62150.3 34.928 209 123 4 77 278 1067 1269 4.48e-29 117
Msa0929710 AT3G62150.2 33.491 212 119 5 78 278 419 619 6.98e-30 119
Msa0929710 AT3G62150.2 34.928 209 123 4 77 278 1067 1269 4.48e-29 117
Msa0929710 AT3G62150.1 33.491 212 119 5 78 278 419 619 6.98e-30 119
Msa0929710 AT3G62150.1 34.928 209 123 4 77 278 1067 1269 4.48e-29 117
Msa0929710 AT1G10680.1 31.933 238 132 6 77 291 997 1227 1.41e-29 119
Msa0929710 AT1G10680.1 34.783 207 121 4 79 278 378 577 3.66e-29 117
Msa0929710 AT4G01820.1 31.111 225 149 3 78 299 364 585 1.41e-29 119
Msa0929710 AT4G01820.1 32.367 207 132 3 77 278 999 1202 8.07e-25 105
Msa0929710 AT4G01820.2 31.111 225 149 3 78 299 364 585 1.93e-29 118
Msa0929710 AT3G28360.1 35.321 218 119 5 79 285 363 569 3.53e-29 117
Msa0929710 AT3G28360.1 34.634 205 126 4 79 278 998 1199 1.58e-27 113
Msa0929710 AT1G10680.2 34.783 207 121 4 79 278 378 577 4.07e-29 117
Msa0929710 AT1G10680.2 35.000 160 93 2 77 229 997 1152 5.05e-23 99.8
Msa0929710 AT1G70610.2 34.928 209 129 5 76 279 288 494 4.28e-29 116
Msa0929710 AT3G28415.2 37.379 206 119 5 79 278 1001 1202 6.00e-29 117
Msa0929710 AT3G28415.2 34.783 207 121 4 79 278 363 562 7.90e-28 114
Msa0929710 AT3G28415.1 37.379 206 119 5 79 278 993 1194 6.59e-29 117
Msa0929710 AT3G28415.1 34.783 207 121 4 79 278 355 554 8.51e-28 114
Msa0929710 AT1G70610.1 34.928 209 129 5 76 279 469 675 7.22e-29 116
Msa0929710 AT2G36910.1 33.014 209 126 4 77 278 1039 1240 7.26e-29 117
Msa0929710 AT2G36910.1 32.558 215 133 6 77 285 383 591 5.35e-27 111
Msa0929710 AT3G28345.1 34.862 218 120 5 79 285 376 582 8.22e-29 116
Msa0929710 AT3G28345.1 37.073 205 121 4 79 278 1012 1213 2.12e-28 115
Msa0929710 AT4G28620.1 36.538 208 118 4 78 278 453 653 3.45e-28 114
Msa0929710 AT3G28860.1 33.478 230 139 4 79 301 1027 1249 6.14e-28 114
Msa0929710 AT3G28860.1 33.990 203 128 4 79 278 382 581 1.74e-27 112
Msa0929710 AT5G03910.1 34.783 230 142 3 62 286 395 621 1.24e-27 112
Msa0929710 AT4G28630.1 35.577 208 120 4 78 278 451 651 5.33e-27 111
Msa0929710 AT5G39040.1 34.783 207 122 5 79 278 413 613 5.42e-27 111
Msa0929710 AT3G21250.6 32.735 223 135 6 79 294 815 1029 1.99e-26 109
Msa0929710 AT3G21250.3 32.735 223 135 6 79 294 815 1029 1.99e-26 109
Msa0929710 AT3G21250.4 32.735 223 135 6 79 294 1237 1451 2.66e-26 109
Msa0929710 AT3G21250.5 32.735 223 135 6 79 294 1226 1440 2.84e-26 109
Msa0929710 AT3G21250.1 32.735 223 135 6 79 294 1220 1434 2.98e-26 109
Msa0929710 AT3G21250.2 32.735 223 135 6 79 294 1231 1445 3.25e-26 109
Msa0929710 AT3G60160.3 32.558 215 132 5 79 287 1235 1442 1.19e-25 107
Msa0929710 AT3G60160.1 32.558 215 132 5 79 287 1271 1478 1.24e-25 107
Msa0929710 AT1G65410.1 30.041 243 146 6 75 296 95 334 2.07e-25 103
Msa0929710 AT4G25450.3 31.250 208 135 3 77 279 316 520 3.66e-25 105
Msa0929710 AT4G25450.1 31.250 208 135 3 77 279 485 689 4.51e-25 105
Msa0929710 AT1G04120.3 32.000 225 141 6 79 299 1249 1465 2.85e-24 103
Msa0929710 AT1G04120.1 32.000 225 141 6 79 299 1284 1500 2.95e-24 103
Msa0929710 AT3G60970.1 32.558 215 132 5 79 287 818 1025 4.09e-24 102
Msa0929710 AT3G60970.1 27.962 211 129 7 80 285 232 424 1.18e-11 65.9
Msa0929710 AT1G04120.2 32.287 223 138 6 79 299 1284 1495 5.54e-24 102
Msa0929710 AT3G13080.1 30.453 243 143 7 57 285 1260 1490 9.41e-22 96.3
Msa0929710 AT5G61740.2 26.217 267 157 9 48 285 522 777 1.68e-21 95.1
Msa0929710 AT5G61740.3 26.217 267 157 9 48 285 417 672 2.32e-21 94.7
Msa0929710 AT5G61740.1 26.217 267 157 9 48 285 556 811 2.32e-21 94.7
Msa0929710 AT3G47760.1 26.066 211 152 3 80 289 595 802 2.45e-21 94.7
Msa0929710 AT3G13100.1 31.944 216 128 5 79 285 1257 1462 2.87e-21 94.7
Msa0929710 AT3G59140.1 31.776 214 131 5 79 285 1223 1428 3.10e-21 94.7
Msa0929710 AT3G59140.1 27.193 228 145 6 55 278 595 805 1.58e-11 65.5
Msa0929710 AT3G47760.2 26.066 211 152 3 80 289 605 812 3.11e-21 94.4
Msa0929710 AT3G47760.3 26.066 211 152 3 80 289 635 842 3.26e-21 94.4
Msa0929710 AT3G13100.2 31.944 216 128 5 79 285 1012 1217 3.85e-21 94.4
Msa0929710 AT3G47780.1 26.210 248 170 6 44 285 597 837 6.10e-21 93.6
Msa0929710 AT2G07680.6 32.018 228 139 5 80 300 1108 1326 7.37e-21 93.6
Msa0929710 AT2G07680.6 30.732 205 114 8 80 276 502 686 1.45e-12 68.6
Msa0929710 AT2G07680.4 32.018 228 139 5 80 300 1182 1400 7.80e-21 93.6
Msa0929710 AT2G07680.4 31.132 212 117 9 73 276 570 760 1.40e-12 68.6
Msa0929710 AT3G13090.1 30.472 233 143 6 62 285 1218 1440 8.39e-21 93.2
Msa0929710 AT2G07680.1 32.018 228 139 5 80 300 1185 1403 8.73e-21 93.2
Msa0929710 AT2G07680.1 31.132 212 117 9 73 276 573 763 1.55e-12 68.6
Msa0929710 AT2G07680.3 32.018 228 139 5 80 300 1207 1425 8.84e-21 93.2
Msa0929710 AT2G07680.3 30.732 205 114 8 80 276 601 785 1.59e-12 68.6
Msa0929710 AT2G07680.5 32.018 228 139 5 80 300 1191 1409 9.24e-21 93.2
Msa0929710 AT2G07680.5 31.132 212 117 9 73 276 579 769 1.43e-12 68.6
Msa0929710 AT3G13080.5 30.172 232 136 7 57 274 1260 1479 1.08e-20 92.8
Msa0929710 AT3G47750.1 26.316 209 150 3 82 289 638 843 3.65e-20 91.3
Msa0929710 AT3G62700.1 30.894 246 149 6 53 285 1281 1518 4.56e-20 91.3
Msa0929710 AT3G62700.1 29.487 234 131 10 63 285 639 849 3.16e-11 64.7
Msa0929710 AT3G47770.1 27.311 238 163 6 54 285 575 808 6.39e-20 90.5
Msa0929710 AT3G47770.2 27.311 238 163 6 54 285 601 834 6.50e-20 90.5
Msa0929710 AT2G39480.2 28.641 206 142 3 76 279 246 448 4.70e-19 88.2
Msa0929710 AT2G39480.2 28.986 207 134 5 79 278 995 1195 5.26e-16 79.0
Msa0929710 AT2G47800.1 33.178 214 128 4 79 285 1290 1495 5.27e-19 87.8
Msa0929710 AT2G47800.1 29.515 227 119 10 73 285 652 851 8.56e-12 66.2
Msa0929710 AT2G39480.1 28.641 206 142 3 76 279 426 628 6.69e-19 87.8
Msa0929710 AT2G39480.1 28.986 207 134 5 79 278 1175 1375 7.12e-16 78.6
Msa0929710 AT5G61700.1 26.531 196 140 3 80 274 616 808 7.86e-19 87.4
Msa0929710 AT3G47740.1 25.490 204 148 3 83 285 634 834 8.59e-19 87.0
Msa0929710 AT3G55320.1 27.670 206 144 3 76 279 428 630 3.00e-18 85.9
Msa0929710 AT3G55320.1 28.986 207 134 5 79 278 1176 1376 1.22e-14 75.1
Msa0929710 AT3G47790.1 26.872 227 149 8 70 289 598 814 3.78e-18 85.1
Msa0929710 AT2G41700.2 24.016 254 172 7 52 289 1392 1640 2.65e-16 80.1
Msa0929710 AT2G41700.1 24.016 254 172 7 52 289 1434 1682 3.23e-16 79.7
Msa0929710 AT3G13080.2 29.185 233 134 7 57 285 1260 1465 3.69e-16 79.3
Msa0929710 AT2G34660.1 28.000 250 146 10 60 298 611 837 1.66e-15 77.4
Msa0929710 AT2G34660.1 29.302 215 135 6 79 285 1258 1463 7.47e-13 69.7
Msa0929710 AT2G34660.2 28.000 250 146 10 60 298 611 837 1.66e-15 77.4
Msa0929710 AT2G34660.2 29.302 215 135 6 79 285 1258 1463 7.47e-13 69.7
Msa0929710 AT2G34660.3 28.400 250 145 11 60 298 324 550 2.01e-15 77.4
Msa0929710 AT2G34660.3 29.302 215 135 6 79 285 971 1176 7.52e-13 69.7
Msa0929710 AT5G61700.2 26.590 173 125 2 80 251 616 787 4.45e-15 76.3
Msa0929710 AT5G61700.4 26.590 173 125 2 80 251 616 787 4.45e-15 76.3
Msa0929710 AT1G30410.5 28.862 246 144 9 47 278 476 704 7.70e-15 75.5
Msa0929710 AT1G30410.5 26.872 227 157 4 63 285 1120 1341 1.07e-12 68.9
Msa0929710 AT1G30410.3 28.862 246 144 9 47 278 591 819 8.05e-15 75.5
Msa0929710 AT1G30410.1 28.862 246 144 9 47 278 594 822 8.10e-15 75.5
Msa0929710 AT1G30410.1 26.432 227 158 4 63 285 1238 1459 1.04e-12 69.3
Msa0929710 AT1G30410.2 28.862 246 144 9 47 278 591 819 9.73e-15 75.1
Msa0929710 AT1G30410.2 26.432 227 158 4 63 285 1235 1456 1.20e-12 68.9
Msa0929710 AT1G30410.6 28.862 246 144 9 47 278 591 819 9.73e-15 75.1
Msa0929710 AT1G30410.6 26.432 227 158 4 63 285 1235 1456 1.20e-12 68.9
Msa0929710 AT1G30410.4 28.862 246 144 9 47 278 591 819 9.73e-15 75.1
Msa0929710 AT1G30410.4 26.432 227 158 4 63 285 1235 1456 1.20e-12 68.9
Msa0929710 AT3G60160.2 42.500 80 46 0 79 158 1271 1350 2.88e-14 73.9
Msa0929710 AT2G13610.1 29.762 252 155 9 56 291 37 282 3.68e-14 73.2
Msa0929710 AT4G33460.1 30.392 204 123 6 79 278 59 247 4.97e-14 71.2
Msa0929710 AT1G30400.2 28.862 246 149 11 60 298 611 837 8.97e-14 72.4
Msa0929710 AT1G30400.2 30.233 215 133 5 79 285 1253 1458 1.18e-12 68.9
Msa0929710 AT1G30400.1 28.862 246 149 11 60 298 611 837 8.97e-14 72.4
Msa0929710 AT1G30400.1 30.233 215 133 5 79 285 1253 1458 1.18e-12 68.9
Msa0929710 AT1G30420.2 28.269 283 150 12 35 288 571 829 9.85e-14 72.0
Msa0929710 AT1G30420.1 28.269 283 150 12 35 288 571 829 1.07e-13 72.0
Msa0929710 AT1G30420.1 26.667 225 160 4 63 285 1235 1456 1.70e-13 71.6
Msa0929710 AT1G63270.1 30.811 185 103 4 78 252 24 193 1.11e-13 69.7
Msa0929710 AT3G47790.2 26.984 189 123 6 70 251 479 659 3.09e-13 70.5
Msa0929710 AT3G47790.3 26.984 189 123 6 70 251 598 778 3.20e-13 70.5
Msa0929710 AT4G25750.1 30.882 204 130 5 79 277 30 227 1.47e-12 68.2
Msa0929710 AT5G14100.1 29.004 231 148 7 63 282 51 276 2.50e-12 66.2
Msa0929710 AT3G25620.2 30.097 206 128 7 79 274 99 298 1.49e-11 65.5
Msa0929710 AT3G25620.1 30.097 206 128 7 79 274 99 298 1.78e-11 64.7
Msa0929710 AT2G37360.1 26.860 242 154 8 69 292 120 356 1.91e-11 65.1
Msa0929710 AT1G53270.1 29.808 208 135 6 79 278 50 254 1.91e-11 65.1
Msa0929710 AT5G39040.2 34.940 83 54 0 79 161 413 495 3.13e-11 64.3
Msa0929710 AT1G31770.1 28.708 209 127 7 79 274 81 280 3.17e-11 64.3
Msa0929710 AT3G47730.1 22.886 201 145 6 80 276 547 741 4.79e-11 63.9
Msa0929710 AT5G52860.1 28.054 221 149 5 61 277 26 240 8.66e-11 62.8

Find 110 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATATAGTTGCTTGCTTTAA+AGG 0.051433 6_2:-78545618 Msa0929710:three_prime_UTR
CCAATTATGTCTTCCGTCTT+AGG 0.197172 6_2:-78546578 Msa0929710:intron
CCTAAGACGGAAGACATAAT+TGG 0.197284 6_2:+78546578 None:intergenic
CAGCTCCCTGCTCTCTTTGA+AGG 0.288977 6_2:-78546181 Msa0929710:CDS
ATCCCAACAACCATACCTTT+TGG 0.293764 6_2:+78546352 None:intergenic
CACTTTCACTTTCACTTGTT+GGG 0.308141 6_2:-78545701 Msa0929710:three_prime_UTR
TCACTTTCACTTTCACTTGT+TGG 0.334530 6_2:-78545702 Msa0929710:three_prime_UTR
ATAAATTAAGTAGGAACATA+TGG 0.345722 6_2:+78545668 None:intergenic
TTGTTTGTGGTGTGGCTCTT+TGG 0.346036 6_2:-78546684 Msa0929710:CDS
CATGAAGTTGAACAAGAATC+AGG 0.361069 6_2:-78545894 Msa0929710:CDS
CTAGTGTGCTTGGTTGTTGA+TGG 0.364596 6_2:-78545815 Msa0929710:CDS
TGCTGACCTCTCTGTTGGTC+AGG 0.366632 6_2:-78546029 Msa0929710:CDS
TATGGTGACCATATGAATAT+AGG 0.376284 6_2:+78546639 None:intergenic
TTCTTCTTCTACTAATTTCA+AGG 0.377037 6_2:-78546062 Msa0929710:CDS
GCGGCAAGTCAACCCTCTTA+AGG 0.384595 6_2:-78546312 Msa0929710:CDS
TGAGCTTGAGAGAGTTGATT+AGG 0.394063 6_2:+78545770 None:intergenic
TAAGGGCCTTGAATCGCCTC+TGG 0.396921 6_2:-78546294 Msa0929710:CDS
TGAAATGAAATAAAATGAAA+TGG 0.399734 6_2:+78546776 None:intergenic
TTCATATTCCTATATTCATA+TGG 0.402541 6_2:-78546647 Msa0929710:CDS
TCCCAAAAGGTATGGTTGTT+GGG 0.415953 6_2:-78546354 Msa0929710:CDS
GGTATGGTTGTTGGGATCAT+AGG 0.418866 6_2:-78546346 Msa0929710:CDS
TTTGACAGAGCACTTGTTGT+TGG 0.423452 6_2:-78546479 Msa0929710:intron
CGGCAAGTCAACCCTCTTAA+GGG 0.436573 6_2:-78546311 Msa0929710:CDS
CTCAAAGAGTTGCACTTGCC+AGG 0.439343 6_2:-78546006 Msa0929710:CDS
GGCGATTCAAGGCCCTTAAG+AGG 0.442745 6_2:+78546299 None:intergenic
ACTAATTTCAAGGATAAGTC+AGG 0.447217 6_2:-78546052 Msa0929710:CDS
CTGAGAAAAGAATCGGATGA+TGG 0.447625 6_2:-78546412 Msa0929710:CDS
ATCCCAAAAGGTATGGTTGT+TGG 0.457558 6_2:-78546355 Msa0929710:CDS
CGTTCTTTCCCTCCGCCGTA+AGG 0.459477 6_2:-78546218 Msa0929710:CDS
AGCTCCCTGCTCTCTTTGAA+GGG 0.462275 6_2:-78546180 Msa0929710:CDS
CTAAGACGGAAGACATAATT+GGG 0.463489 6_2:+78546579 None:intergenic
AGCTTTATTCCCCTCAGTTG+TGG 0.464930 6_2:+78546130 None:intergenic
TGCATAAGTGGTAATAAGAA+TGG 0.473762 6_2:-78545559 Msa0929710:three_prime_UTR
TAAATTAAGTAGGAACATAT+GGG 0.474964 6_2:+78545669 None:intergenic
GAAAGAGCATGGCGACCTTA+CGG 0.480074 6_2:+78546203 None:intergenic
GCATGGCGACCTTACGGCGG+AGG 0.486540 6_2:+78546209 None:intergenic
TCAACTGACATGTGCATAAG+TGG 0.495124 6_2:-78545571 Msa0929710:three_prime_UTR
TGGCTCCCAGAGGCGATTCA+AGG 0.499145 6_2:+78546288 None:intergenic
AGAGCACTTGTTGTTGGATG+TGG 0.499445 6_2:-78546473 Msa0929710:CDS
GACGGAAGACATAATTGGGT+TGG 0.499722 6_2:+78546583 None:intergenic
ACGGAAGACATAATTGGGTT+GGG 0.501095 6_2:+78546584 None:intergenic
GTTGACTTGCCGCTGCCACT+AGG 0.501645 6_2:+78546322 None:intergenic
CAACCTTTCTTTACCTAAGA+CGG 0.501689 6_2:+78546565 None:intergenic
AATGAGAATGTATTATTGTA+TGG 0.510270 6_2:+78546621 None:intergenic
TCCTCCTCCGTCTTCCTCGA+TGG 0.512098 6_2:-78546262 Msa0929710:CDS
GTTGCGGACAACGTGAGATA+TGG 0.514877 6_2:-78546154 Msa0929710:CDS
ATTGGATCTAATGCACTAGT+AGG 0.518384 6_2:+78545944 None:intergenic
TGAGAAAAGAATCGGATGAT+GGG 0.519552 6_2:-78546411 Msa0929710:CDS
GATGGCTGATCTAGTGTGCT+TGG 0.520246 6_2:-78545825 Msa0929710:CDS
TTCAAGAAACCTCCTTGCCA+TGG 0.522668 6_2:+78545742 None:intergenic
GCATAAGAATCAGATATGAC+CGG 0.527335 6_2:-78546713 Msa0929710:exon
CATAAGAATCAGATATGACC+GGG 0.528350 6_2:-78546712 Msa0929710:exon
CTCATCCAGCAGCAAAACCT+CGG 0.530773 6_2:+78545967 None:intergenic
ACTGTCCCTTCAAAGAGAGC+AGG 0.531211 6_2:+78546175 None:intergenic
ATATCCACAGAAAACATTGA+AGG 0.533483 6_2:-78545923 Msa0929710:CDS
GATTCTTGTTCAACTTCATG+AGG 0.534306 6_2:+78545897 None:intergenic
TGACCGGGGAAGGTTGTTTG+TGG 0.537122 6_2:-78546697 Msa0929710:CDS
TCAGGTGCTGACCTCTCTGT+TGG 0.539593 6_2:-78546034 Msa0929710:CDS
GAGATATGGTCCACAACTGA+GGG 0.540331 6_2:-78546140 Msa0929710:CDS
CGTTGACATCCCAAAAGGTA+TGG 0.540878 6_2:-78546362 Msa0929710:CDS
AAAGCAGTAATAAATTAAGT+AGG 0.541139 6_2:+78545659 None:intergenic
AGGAAGACGGAGGAGGAAGA+TGG 0.545744 6_2:+78546268 None:intergenic
GAATCAGATATGACCGGGGA+AGG 0.551529 6_2:-78546707 Msa0929710:exon
CTTATGCACATGTCAGTTGA+GGG 0.552433 6_2:+78545574 None:intergenic
ATCATAGGTCCTAGTGGCAG+CGG 0.555290 6_2:-78546331 Msa0929710:CDS
AAAGCTAACGGACGATGAGG+TGG 0.560900 6_2:-78546113 Msa0929710:CDS
TCAGGGCATCACACTCATCA+TGG 0.562359 6_2:-78545876 Msa0929710:CDS
CATGGCGACCTTACGGCGGA+GGG 0.564019 6_2:+78546210 None:intergenic
ATCAGCGTTGACATCCCAAA+AGG 0.564174 6_2:-78546367 Msa0929710:CDS
AAGCTAACGGACGATGAGGT+GGG 0.565601 6_2:-78546112 Msa0929710:CDS
GCCATCGAGGAAGACGGAGG+AGG 0.565970 6_2:+78546261 None:intergenic
AGCAGGGAGCTGAAAGAGCA+TGG 0.566720 6_2:+78546192 None:intergenic
AAGGGCCTTGAATCGCCTCT+GGG 0.566748 6_2:-78546293 Msa0929710:CDS
ACACCACAAACAACCTTCCC+CGG 0.572442 6_2:+78546694 None:intergenic
TCAAGAAACCTCCTTGCCAT+GGG 0.574475 6_2:+78545743 None:intergenic
GAAACCTCCTTGCCATGGGA+TGG 0.578789 6_2:+78545747 None:intergenic
TCATCCAGCAGCAAAACCTC+GGG 0.580881 6_2:+78545968 None:intergenic
GCGATTCAAGGCCCTTAAGA+GGG 0.583783 6_2:+78546300 None:intergenic
GGGGAAGGTTGTTTGTGGTG+TGG 0.585433 6_2:-78546692 Msa0929710:CDS
CATCAAGCAAATACAGAGGA+TGG 0.586777 6_2:-78545843 Msa0929710:CDS
ATTCTTGTTCAACTTCATGA+GGG 0.590397 6_2:+78545898 None:intergenic
GTCTACGCCATCGAGGAAGA+CGG 0.591517 6_2:+78546255 None:intergenic
GCACTTGTTGTTGGATGTGG+AGG 0.595466 6_2:-78546470 Msa0929710:CDS
AGCTAACGGACGATGAGGTG+GGG 0.596216 6_2:-78546111 Msa0929710:CDS
GGGTGAGTTAGCTAGAGTCC+TGG 0.596970 6_2:+78545988 None:intergenic
CTGTCCCTTCAAAGAGAGCA+GGG 0.599827 6_2:+78546176 None:intergenic
ATGAAGTTGAACAAGAATCA+GGG 0.603528 6_2:-78545893 Msa0929710:CDS
ACTTATGCACATGTCAGTTG+AGG 0.605159 6_2:+78545573 None:intergenic
TGCACATGTCAGTTGAGGGA+GGG 0.615745 6_2:+78545578 None:intergenic
CTCTCAAGCTCACCATCCCA+TGG 0.616507 6_2:-78545759 Msa0929710:CDS
AAGCTCACCATCCCATGGCA+AGG 0.618991 6_2:-78545754 Msa0929710:CDS
ATGCACATGTCAGTTGAGGG+AGG 0.622762 6_2:+78545577 None:intergenic
TCTCTTTGAAGGGACAGTTG+CGG 0.623220 6_2:-78546170 Msa0929710:CDS
GGGAAGCTTGAAATACTGAA+AGG 0.624623 6_2:-78546391 Msa0929710:CDS
TGAGATATGGTCCACAACTG+AGG 0.636293 6_2:-78546141 Msa0929710:CDS
GTTGGGATCATAGGTCCTAG+TGG 0.641842 6_2:-78546337 Msa0929710:CDS
AGAGCATGGCGACCTTACGG+CGG 0.655313 6_2:+78546206 None:intergenic
AATAAAGCTAACGGACGATG+AGG 0.656479 6_2:-78546116 Msa0929710:CDS
GACTCTAGCTAACTCACCCG+AGG 0.668902 6_2:-78545984 Msa0929710:CDS
ACTGAGGGGAATAAAGCTAA+CGG 0.669508 6_2:-78546125 Msa0929710:CDS
CTCACCATCCCATGGCAAGG+AGG 0.678078 6_2:-78545751 Msa0929710:CDS
AAATTAAGTAGGAACATATG+GGG 0.684870 6_2:+78545670 None:intergenic
AGGAGGAAGATGGCTCCCAG+AGG 0.707366 6_2:+78546278 None:intergenic
GGCGGAGGGAAAGAACGTCA+AGG 0.708049 6_2:+78546224 None:intergenic
TTTGAGCCTGACCAACAGAG+AGG 0.709846 6_2:+78546023 None:intergenic
AGATATGGTCCACAACTGAG+GGG 0.727081 6_2:-78546139 Msa0929710:CDS
ATAGCATCAAGCAAATACAG+AGG 0.727972 6_2:-78545847 Msa0929710:CDS
TACGCCATCGAGGAAGACGG+AGG 0.729016 6_2:+78546258 None:intergenic
TACATATGTCTACGCCATCG+AGG 0.743214 6_2:+78546248 None:intergenic
ATAAGAATCAGATATGACCG+GGG 0.749808 6_2:-78546711 Msa0929710:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATGAAATAAAATGAAA+TGG + chr6_2:78545567-78545586 None:intergenic 15.0%
!!! AGATTTTTTATCTTGATTTT+CGG + chr6_2:78545910-78545929 None:intergenic 15.0%
!! CAACTATATATATATATATG+TGG + chr6_2:78546712-78546731 None:intergenic 15.0%
!! TGAAATGAAATAAAATGAAA+TGG + chr6_2:78545567-78545586 None:intergenic 15.0%
!!! AGATTTTTTATCTTGATTTT+CGG + chr6_2:78545910-78545929 None:intergenic 15.0%
!! CAACTATATATATATATATG+TGG + chr6_2:78546712-78546731 None:intergenic 15.0%
!!! TCTTATGCTAGATTTTTTTA+AGG + chr6_2:78545615-78545634 None:intergenic 20.0%
!! TTCATATTCCTATATTCATA+TGG - chr6_2:78545693-78545712 Msa0929710:three_prime_UTR 20.0%
!! AATGAGAATGTATTATTGTA+TGG + chr6_2:78545722-78545741 None:intergenic 20.0%
!! AAAAAATCTGAGAAAAGAAT+CGG - chr6_2:78545921-78545940 Msa0929710:CDS 20.0%
!! TAAATTAAGTAGGAACATAT+GGG + chr6_2:78546674-78546693 None:intergenic 20.0%
!! ATAAATTAAGTAGGAACATA+TGG + chr6_2:78546675-78546694 None:intergenic 20.0%
!! AAAGCAGTAATAAATTAAGT+AGG + chr6_2:78546684-78546703 None:intergenic 20.0%
!!! TCTTATGCTAGATTTTTTTA+AGG + chr6_2:78545615-78545634 None:intergenic 20.0%
!! TTCATATTCCTATATTCATA+TGG - chr6_2:78545693-78545712 Msa0929710:three_prime_UTR 20.0%
!! AATGAGAATGTATTATTGTA+TGG + chr6_2:78545722-78545741 None:intergenic 20.0%
!! AAAAAATCTGAGAAAAGAAT+CGG - chr6_2:78545921-78545940 Msa0929710:CDS 20.0%
!! TAAATTAAGTAGGAACATAT+GGG + chr6_2:78546674-78546693 None:intergenic 20.0%
!! ATAAATTAAGTAGGAACATA+TGG + chr6_2:78546675-78546694 None:intergenic 20.0%
!! AAAGCAGTAATAAATTAAGT+AGG + chr6_2:78546684-78546703 None:intergenic 20.0%
! TTCTTCTTCTACTAATTTCA+AGG - chr6_2:78546278-78546297 Msa0929710:CDS 25.0%
! AAATTAAGTAGGAACATATG+GGG + chr6_2:78546673-78546692 None:intergenic 25.0%
! TATATAGTTGCTTGCTTTAA+AGG - chr6_2:78546722-78546741 Msa0929710:five_prime_UTR 25.0%
! TTCTTCTTCTACTAATTTCA+AGG - chr6_2:78546278-78546297 Msa0929710:CDS 25.0%
! AAATTAAGTAGGAACATATG+GGG + chr6_2:78546673-78546692 None:intergenic 25.0%
! TATATAGTTGCTTGCTTTAA+AGG - chr6_2:78546722-78546741 Msa0929710:five_prime_UTR 25.0%
TATGGTGACCATATGAATAT+AGG + chr6_2:78545704-78545723 None:intergenic 30.0%
ACTAATTTCAAGGATAAGTC+AGG - chr6_2:78546288-78546307 Msa0929710:CDS 30.0%
! TCAATGTTTTCTGTGGATAT+TGG + chr6_2:78546417-78546436 None:intergenic 30.0%
ATATCCACAGAAAACATTGA+AGG - chr6_2:78546417-78546436 Msa0929710:CDS 30.0%
ATTCTTGTTCAACTTCATGA+GGG + chr6_2:78546445-78546464 None:intergenic 30.0%
ATGAAGTTGAACAAGAATCA+GGG - chr6_2:78546447-78546466 Msa0929710:CDS 30.0%
TGCATAAGTGGTAATAAGAA+TGG - chr6_2:78546781-78546800 Msa0929710:five_prime_UTR 30.0%
TATGGTGACCATATGAATAT+AGG + chr6_2:78545704-78545723 None:intergenic 30.0%
ACTAATTTCAAGGATAAGTC+AGG - chr6_2:78546288-78546307 Msa0929710:CDS 30.0%
! TCAATGTTTTCTGTGGATAT+TGG + chr6_2:78546417-78546436 None:intergenic 30.0%
ATATCCACAGAAAACATTGA+AGG - chr6_2:78546417-78546436 Msa0929710:CDS 30.0%
ATTCTTGTTCAACTTCATGA+GGG + chr6_2:78546445-78546464 None:intergenic 30.0%
ATGAAGTTGAACAAGAATCA+GGG - chr6_2:78546447-78546466 Msa0929710:CDS 30.0%
TGCATAAGTGGTAATAAGAA+TGG - chr6_2:78546781-78546800 Msa0929710:five_prime_UTR 30.0%
GCATAAGAATCAGATATGAC+CGG - chr6_2:78545627-78545646 Msa0929710:three_prime_UTR 35.0%
CATAAGAATCAGATATGACC+GGG - chr6_2:78545628-78545647 Msa0929710:three_prime_UTR 35.0%
ATAAGAATCAGATATGACCG+GGG - chr6_2:78545629-78545648 Msa0929710:three_prime_UTR 35.0%
CTAAGACGGAAGACATAATT+GGG + chr6_2:78545764-78545783 None:intergenic 35.0%
CAACCTTTCTTTACCTAAGA+CGG + chr6_2:78545778-78545797 None:intergenic 35.0%
TGAGAAAAGAATCGGATGAT+GGG - chr6_2:78545929-78545948 Msa0929710:CDS 35.0%
ATTGGATCTAATGCACTAGT+AGG + chr6_2:78546399-78546418 None:intergenic 35.0%
GATTCTTGTTCAACTTCATG+AGG + chr6_2:78546446-78546465 None:intergenic 35.0%
CATGAAGTTGAACAAGAATC+AGG - chr6_2:78546446-78546465 Msa0929710:CDS 35.0%
ATAGCATCAAGCAAATACAG+AGG - chr6_2:78546493-78546512 Msa0929710:intron 35.0%
TCACTTTCACTTTCACTTGT+TGG - chr6_2:78546638-78546657 Msa0929710:CDS 35.0%
CACTTTCACTTTCACTTGTT+GGG - chr6_2:78546639-78546658 Msa0929710:CDS 35.0%
GCATAAGAATCAGATATGAC+CGG - chr6_2:78545627-78545646 Msa0929710:three_prime_UTR 35.0%
CATAAGAATCAGATATGACC+GGG - chr6_2:78545628-78545647 Msa0929710:three_prime_UTR 35.0%
ATAAGAATCAGATATGACCG+GGG - chr6_2:78545629-78545648 Msa0929710:three_prime_UTR 35.0%
CTAAGACGGAAGACATAATT+GGG + chr6_2:78545764-78545783 None:intergenic 35.0%
CAACCTTTCTTTACCTAAGA+CGG + chr6_2:78545778-78545797 None:intergenic 35.0%
TGAGAAAAGAATCGGATGAT+GGG - chr6_2:78545929-78545948 Msa0929710:CDS 35.0%
ATTGGATCTAATGCACTAGT+AGG + chr6_2:78546399-78546418 None:intergenic 35.0%
GATTCTTGTTCAACTTCATG+AGG + chr6_2:78546446-78546465 None:intergenic 35.0%
CATGAAGTTGAACAAGAATC+AGG - chr6_2:78546446-78546465 Msa0929710:CDS 35.0%
ATAGCATCAAGCAAATACAG+AGG - chr6_2:78546493-78546512 Msa0929710:intron 35.0%
TCACTTTCACTTTCACTTGT+TGG - chr6_2:78546638-78546657 Msa0929710:CDS 35.0%
CACTTTCACTTTCACTTGTT+GGG - chr6_2:78546639-78546658 Msa0929710:CDS 35.0%
ACGGAAGACATAATTGGGTT+GGG + chr6_2:78545759-78545778 None:intergenic 40.0%
CCTAAGACGGAAGACATAAT+TGG + chr6_2:78545765-78545784 None:intergenic 40.0%
CCAATTATGTCTTCCGTCTT+AGG - chr6_2:78545762-78545781 Msa0929710:CDS 40.0%
CTTCCGTCTTAGGTAAAGAA+AGG - chr6_2:78545772-78545791 Msa0929710:CDS 40.0%
!! TTTGACAGAGCACTTGTTGT+TGG - chr6_2:78545861-78545880 Msa0929710:CDS 40.0%
CTGAGAAAAGAATCGGATGA+TGG - chr6_2:78545928-78545947 Msa0929710:CDS 40.0%
GGGAAGCTTGAAATACTGAA+AGG - chr6_2:78545949-78545968 Msa0929710:CDS 40.0%
! ATCCCAAAAGGTATGGTTGT+TGG - chr6_2:78545985-78546004 Msa0929710:CDS 40.0%
! TCCCAAAAGGTATGGTTGTT+GGG - chr6_2:78545986-78546005 Msa0929710:CDS 40.0%
! TCCCAACAACCATACCTTTT+GGG + chr6_2:78545990-78546009 None:intergenic 40.0%
! ATCCCAACAACCATACCTTT+TGG + chr6_2:78545991-78546010 None:intergenic 40.0%
ACTGAGGGGAATAAAGCTAA+CGG - chr6_2:78546215-78546234 Msa0929710:CDS 40.0%
! AATAAAGCTAACGGACGATG+AGG - chr6_2:78546224-78546243 Msa0929710:CDS 40.0%
CATCAAGCAAATACAGAGGA+TGG - chr6_2:78546497-78546516 Msa0929710:intron 40.0%
! TGAGCTTGAGAGAGTTGATT+AGG + chr6_2:78546573-78546592 None:intergenic 40.0%
CTTATGCACATGTCAGTTGA+GGG + chr6_2:78546769-78546788 None:intergenic 40.0%
ACTTATGCACATGTCAGTTG+AGG + chr6_2:78546770-78546789 None:intergenic 40.0%
TCAACTGACATGTGCATAAG+TGG - chr6_2:78546769-78546788 Msa0929710:five_prime_UTR 40.0%
ACGGAAGACATAATTGGGTT+GGG + chr6_2:78545759-78545778 None:intergenic 40.0%
CCTAAGACGGAAGACATAAT+TGG + chr6_2:78545765-78545784 None:intergenic 40.0%
CCAATTATGTCTTCCGTCTT+AGG - chr6_2:78545762-78545781 Msa0929710:CDS 40.0%
CTTCCGTCTTAGGTAAAGAA+AGG - chr6_2:78545772-78545791 Msa0929710:CDS 40.0%
!! TTTGACAGAGCACTTGTTGT+TGG - chr6_2:78545861-78545880 Msa0929710:CDS 40.0%
CTGAGAAAAGAATCGGATGA+TGG - chr6_2:78545928-78545947 Msa0929710:CDS 40.0%
GGGAAGCTTGAAATACTGAA+AGG - chr6_2:78545949-78545968 Msa0929710:CDS 40.0%
! ATCCCAAAAGGTATGGTTGT+TGG - chr6_2:78545985-78546004 Msa0929710:CDS 40.0%
! TCCCAAAAGGTATGGTTGTT+GGG - chr6_2:78545986-78546005 Msa0929710:CDS 40.0%
! TCCCAACAACCATACCTTTT+GGG + chr6_2:78545990-78546009 None:intergenic 40.0%
! ATCCCAACAACCATACCTTT+TGG + chr6_2:78545991-78546010 None:intergenic 40.0%
ACTGAGGGGAATAAAGCTAA+CGG - chr6_2:78546215-78546234 Msa0929710:CDS 40.0%
! AATAAAGCTAACGGACGATG+AGG - chr6_2:78546224-78546243 Msa0929710:CDS 40.0%
CATCAAGCAAATACAGAGGA+TGG - chr6_2:78546497-78546516 Msa0929710:intron 40.0%
! TGAGCTTGAGAGAGTTGATT+AGG + chr6_2:78546573-78546592 None:intergenic 40.0%
CTTATGCACATGTCAGTTGA+GGG + chr6_2:78546769-78546788 None:intergenic 40.0%
ACTTATGCACATGTCAGTTG+AGG + chr6_2:78546770-78546789 None:intergenic 40.0%
TCAACTGACATGTGCATAAG+TGG - chr6_2:78546769-78546788 Msa0929710:five_prime_UTR 40.0%
TTGTTTGTGGTGTGGCTCTT+TGG - chr6_2:78545656-78545675 Msa0929710:three_prime_UTR 45.0%
GACGGAAGACATAATTGGGT+TGG + chr6_2:78545760-78545779 None:intergenic 45.0%
!! AGAGCACTTGTTGTTGGATG+TGG - chr6_2:78545867-78545886 Msa0929710:CDS 45.0%
!! ATCAGCGTTGACATCCCAAA+AGG - chr6_2:78545973-78545992 Msa0929710:CDS 45.0%
CGTTGACATCCCAAAAGGTA+TGG - chr6_2:78545978-78545997 Msa0929710:CDS 45.0%
GGTATGGTTGTTGGGATCAT+AGG - chr6_2:78545994-78546013 Msa0929710:CDS 45.0%
TACATATGTCTACGCCATCG+AGG + chr6_2:78546095-78546114 None:intergenic 45.0%
! TCTCTTTGAAGGGACAGTTG+CGG - chr6_2:78546170-78546189 Msa0929710:CDS 45.0%
TGAGATATGGTCCACAACTG+AGG - chr6_2:78546199-78546218 Msa0929710:CDS 45.0%
GAGATATGGTCCACAACTGA+GGG - chr6_2:78546200-78546219 Msa0929710:CDS 45.0%
AGATATGGTCCACAACTGAG+GGG - chr6_2:78546201-78546220 Msa0929710:CDS 45.0%
!! AGCTTTATTCCCCTCAGTTG+TGG + chr6_2:78546213-78546232 None:intergenic 45.0%
!!! GGTGGGGAAGTTGCTTTTAA+TGG - chr6_2:78546245-78546264 Msa0929710:CDS 45.0%
!!! GGGGAAGTTGCTTTTAATGG+CGG - chr6_2:78546248-78546267 Msa0929710:CDS 45.0%
! GGCACCTTCAATGTTTTCTG+TGG + chr6_2:78546424-78546443 None:intergenic 45.0%
CTAGTGTGCTTGGTTGTTGA+TGG - chr6_2:78546525-78546544 Msa0929710:intron 45.0%
TCAAGAAACCTCCTTGCCAT+GGG + chr6_2:78546600-78546619 None:intergenic 45.0%
TTCAAGAAACCTCCTTGCCA+TGG + chr6_2:78546601-78546620 None:intergenic 45.0%
TTGTTTGTGGTGTGGCTCTT+TGG - chr6_2:78545656-78545675 Msa0929710:three_prime_UTR 45.0%
GACGGAAGACATAATTGGGT+TGG + chr6_2:78545760-78545779 None:intergenic 45.0%
!! AGAGCACTTGTTGTTGGATG+TGG - chr6_2:78545867-78545886 Msa0929710:CDS 45.0%
!! ATCAGCGTTGACATCCCAAA+AGG - chr6_2:78545973-78545992 Msa0929710:CDS 45.0%
CGTTGACATCCCAAAAGGTA+TGG - chr6_2:78545978-78545997 Msa0929710:CDS 45.0%
GGTATGGTTGTTGGGATCAT+AGG - chr6_2:78545994-78546013 Msa0929710:CDS 45.0%
TACATATGTCTACGCCATCG+AGG + chr6_2:78546095-78546114 None:intergenic 45.0%
! TCTCTTTGAAGGGACAGTTG+CGG - chr6_2:78546170-78546189 Msa0929710:CDS 45.0%
TGAGATATGGTCCACAACTG+AGG - chr6_2:78546199-78546218 Msa0929710:CDS 45.0%
GAGATATGGTCCACAACTGA+GGG - chr6_2:78546200-78546219 Msa0929710:CDS 45.0%
AGATATGGTCCACAACTGAG+GGG - chr6_2:78546201-78546220 Msa0929710:CDS 45.0%
!! AGCTTTATTCCCCTCAGTTG+TGG + chr6_2:78546213-78546232 None:intergenic 45.0%
!!! GGTGGGGAAGTTGCTTTTAA+TGG - chr6_2:78546245-78546264 Msa0929710:CDS 45.0%
!!! GGGGAAGTTGCTTTTAATGG+CGG - chr6_2:78546248-78546267 Msa0929710:CDS 45.0%
! GGCACCTTCAATGTTTTCTG+TGG + chr6_2:78546424-78546443 None:intergenic 45.0%
CTAGTGTGCTTGGTTGTTGA+TGG - chr6_2:78546525-78546544 Msa0929710:intron 45.0%
TCAAGAAACCTCCTTGCCAT+GGG + chr6_2:78546600-78546619 None:intergenic 45.0%
TTCAAGAAACCTCCTTGCCA+TGG + chr6_2:78546601-78546620 None:intergenic 45.0%
GAATCAGATATGACCGGGGA+AGG - chr6_2:78545633-78545652 Msa0929710:three_prime_UTR 50.0%
ACACCACAAACAACCTTCCC+CGG + chr6_2:78545649-78545668 None:intergenic 50.0%
!! GCACTTGTTGTTGGATGTGG+AGG - chr6_2:78545870-78545889 Msa0929710:CDS 50.0%
GTTGGGATCATAGGTCCTAG+TGG - chr6_2:78546003-78546022 Msa0929710:CDS 50.0%
ATCATAGGTCCTAGTGGCAG+CGG - chr6_2:78546009-78546028 Msa0929710:CDS 50.0%
CGGCAAGTCAACCCTCTTAA+GGG - chr6_2:78546029-78546048 Msa0929710:CDS 50.0%
GCGATTCAAGGCCCTTAAGA+GGG + chr6_2:78546043-78546062 None:intergenic 50.0%
! GAAAGAGCATGGCGACCTTA+CGG + chr6_2:78546140-78546159 None:intergenic 50.0%
AGCTCCCTGCTCTCTTTGAA+GGG - chr6_2:78546160-78546179 Msa0929710:CDS 50.0%
CTGTCCCTTCAAAGAGAGCA+GGG + chr6_2:78546167-78546186 None:intergenic 50.0%
ACTGTCCCTTCAAAGAGAGC+AGG + chr6_2:78546168-78546187 None:intergenic 50.0%
GTTGCGGACAACGTGAGATA+TGG - chr6_2:78546186-78546205 Msa0929710:CDS 50.0%
! AAAGCTAACGGACGATGAGG+TGG - chr6_2:78546227-78546246 Msa0929710:CDS 50.0%
! AAGCTAACGGACGATGAGGT+GGG - chr6_2:78546228-78546247 Msa0929710:CDS 50.0%
TTTGAGCCTGACCAACAGAG+AGG + chr6_2:78546320-78546339 None:intergenic 50.0%
CTCAAAGAGTTGCACTTGCC+AGG - chr6_2:78546334-78546353 Msa0929710:CDS 50.0%
TCATCCAGCAGCAAAACCTC+GGG + chr6_2:78546375-78546394 None:intergenic 50.0%
CTCATCCAGCAGCAAAACCT+CGG + chr6_2:78546376-78546395 None:intergenic 50.0%
! TCAGGGCATCACACTCATCA+TGG - chr6_2:78546464-78546483 Msa0929710:CDS 50.0%
GATGGCTGATCTAGTGTGCT+TGG - chr6_2:78546515-78546534 Msa0929710:intron 50.0%
TGCACATGTCAGTTGAGGGA+GGG + chr6_2:78546765-78546784 None:intergenic 50.0%
ATGCACATGTCAGTTGAGGG+AGG + chr6_2:78546766-78546785 None:intergenic 50.0%
GAATCAGATATGACCGGGGA+AGG - chr6_2:78545633-78545652 Msa0929710:three_prime_UTR 50.0%
ACACCACAAACAACCTTCCC+CGG + chr6_2:78545649-78545668 None:intergenic 50.0%
!! GCACTTGTTGTTGGATGTGG+AGG - chr6_2:78545870-78545889 Msa0929710:CDS 50.0%
GTTGGGATCATAGGTCCTAG+TGG - chr6_2:78546003-78546022 Msa0929710:CDS 50.0%
ATCATAGGTCCTAGTGGCAG+CGG - chr6_2:78546009-78546028 Msa0929710:CDS 50.0%
CGGCAAGTCAACCCTCTTAA+GGG - chr6_2:78546029-78546048 Msa0929710:CDS 50.0%
GCGATTCAAGGCCCTTAAGA+GGG + chr6_2:78546043-78546062 None:intergenic 50.0%
! GAAAGAGCATGGCGACCTTA+CGG + chr6_2:78546140-78546159 None:intergenic 50.0%
AGCTCCCTGCTCTCTTTGAA+GGG - chr6_2:78546160-78546179 Msa0929710:CDS 50.0%
CTGTCCCTTCAAAGAGAGCA+GGG + chr6_2:78546167-78546186 None:intergenic 50.0%
ACTGTCCCTTCAAAGAGAGC+AGG + chr6_2:78546168-78546187 None:intergenic 50.0%
GTTGCGGACAACGTGAGATA+TGG - chr6_2:78546186-78546205 Msa0929710:CDS 50.0%
! AAAGCTAACGGACGATGAGG+TGG - chr6_2:78546227-78546246 Msa0929710:CDS 50.0%
! AAGCTAACGGACGATGAGGT+GGG - chr6_2:78546228-78546247 Msa0929710:CDS 50.0%
TTTGAGCCTGACCAACAGAG+AGG + chr6_2:78546320-78546339 None:intergenic 50.0%
CTCAAAGAGTTGCACTTGCC+AGG - chr6_2:78546334-78546353 Msa0929710:CDS 50.0%
TCATCCAGCAGCAAAACCTC+GGG + chr6_2:78546375-78546394 None:intergenic 50.0%
CTCATCCAGCAGCAAAACCT+CGG + chr6_2:78546376-78546395 None:intergenic 50.0%
! TCAGGGCATCACACTCATCA+TGG - chr6_2:78546464-78546483 Msa0929710:CDS 50.0%
GATGGCTGATCTAGTGTGCT+TGG - chr6_2:78546515-78546534 Msa0929710:intron 50.0%
TGCACATGTCAGTTGAGGGA+GGG + chr6_2:78546765-78546784 None:intergenic 50.0%
ATGCACATGTCAGTTGAGGG+AGG + chr6_2:78546766-78546785 None:intergenic 50.0%
TGACCGGGGAAGGTTGTTTG+TGG - chr6_2:78545643-78545662 Msa0929710:three_prime_UTR 55.0%
GGGGAAGGTTGTTTGTGGTG+TGG - chr6_2:78545648-78545667 Msa0929710:three_prime_UTR 55.0%
GCGGCAAGTCAACCCTCTTA+AGG - chr6_2:78546028-78546047 Msa0929710:CDS 55.0%
GGCGATTCAAGGCCCTTAAG+AGG + chr6_2:78546044-78546063 None:intergenic 55.0%
TAAGGGCCTTGAATCGCCTC+TGG - chr6_2:78546046-78546065 Msa0929710:CDS 55.0%
AAGGGCCTTGAATCGCCTCT+GGG - chr6_2:78546047-78546066 Msa0929710:CDS 55.0%
AGGAAGACGGAGGAGGAAGA+TGG + chr6_2:78546075-78546094 None:intergenic 55.0%
GTCTACGCCATCGAGGAAGA+CGG + chr6_2:78546088-78546107 None:intergenic 55.0%
AGCAGGGAGCTGAAAGAGCA+TGG + chr6_2:78546151-78546170 None:intergenic 55.0%
CAGCTCCCTGCTCTCTTTGA+AGG - chr6_2:78546159-78546178 Msa0929710:CDS 55.0%
! AGCTAACGGACGATGAGGTG+GGG - chr6_2:78546229-78546248 Msa0929710:CDS 55.0%
!! TCAGGTGCTGACCTCTCTGT+TGG - chr6_2:78546306-78546325 Msa0929710:CDS 55.0%
TGCTGACCTCTCTGTTGGTC+AGG - chr6_2:78546311-78546330 Msa0929710:CDS 55.0%
GGGTGAGTTAGCTAGAGTCC+TGG + chr6_2:78546355-78546374 None:intergenic 55.0%
GACTCTAGCTAACTCACCCG+AGG - chr6_2:78546356-78546375 Msa0929710:CDS 55.0%
CTCTCAAGCTCACCATCCCA+TGG - chr6_2:78546581-78546600 Msa0929710:CDS 55.0%
AAGCTCACCATCCCATGGCA+AGG - chr6_2:78546586-78546605 Msa0929710:CDS 55.0%
GAAACCTCCTTGCCATGGGA+TGG + chr6_2:78546596-78546615 None:intergenic 55.0%
TGACCGGGGAAGGTTGTTTG+TGG - chr6_2:78545643-78545662 Msa0929710:three_prime_UTR 55.0%
GGGGAAGGTTGTTTGTGGTG+TGG - chr6_2:78545648-78545667 Msa0929710:three_prime_UTR 55.0%
GCGGCAAGTCAACCCTCTTA+AGG - chr6_2:78546028-78546047 Msa0929710:CDS 55.0%
GGCGATTCAAGGCCCTTAAG+AGG + chr6_2:78546044-78546063 None:intergenic 55.0%
TAAGGGCCTTGAATCGCCTC+TGG - chr6_2:78546046-78546065 Msa0929710:CDS 55.0%
AAGGGCCTTGAATCGCCTCT+GGG - chr6_2:78546047-78546066 Msa0929710:CDS 55.0%
AGGAAGACGGAGGAGGAAGA+TGG + chr6_2:78546075-78546094 None:intergenic 55.0%
GTCTACGCCATCGAGGAAGA+CGG + chr6_2:78546088-78546107 None:intergenic 55.0%
AGCAGGGAGCTGAAAGAGCA+TGG + chr6_2:78546151-78546170 None:intergenic 55.0%
CAGCTCCCTGCTCTCTTTGA+AGG - chr6_2:78546159-78546178 Msa0929710:CDS 55.0%
! AGCTAACGGACGATGAGGTG+GGG - chr6_2:78546229-78546248 Msa0929710:CDS 55.0%
!! TCAGGTGCTGACCTCTCTGT+TGG - chr6_2:78546306-78546325 Msa0929710:CDS 55.0%
TGCTGACCTCTCTGTTGGTC+AGG - chr6_2:78546311-78546330 Msa0929710:CDS 55.0%
GGGTGAGTTAGCTAGAGTCC+TGG + chr6_2:78546355-78546374 None:intergenic 55.0%
GACTCTAGCTAACTCACCCG+AGG - chr6_2:78546356-78546375 Msa0929710:CDS 55.0%
CTCTCAAGCTCACCATCCCA+TGG - chr6_2:78546581-78546600 Msa0929710:CDS 55.0%
AAGCTCACCATCCCATGGCA+AGG - chr6_2:78546586-78546605 Msa0929710:CDS 55.0%
GAAACCTCCTTGCCATGGGA+TGG + chr6_2:78546596-78546615 None:intergenic 55.0%
!! GTTGACTTGCCGCTGCCACT+AGG + chr6_2:78546021-78546040 None:intergenic 60.0%
TGGCTCCCAGAGGCGATTCA+AGG + chr6_2:78546055-78546074 None:intergenic 60.0%
AGGAGGAAGATGGCTCCCAG+AGG + chr6_2:78546065-78546084 None:intergenic 60.0%
TCCTCCTCCGTCTTCCTCGA+TGG - chr6_2:78546078-78546097 Msa0929710:CDS 60.0%
TACGCCATCGAGGAAGACGG+AGG + chr6_2:78546085-78546104 None:intergenic 60.0%
GGCGGAGGGAAAGAACGTCA+AGG + chr6_2:78546119-78546138 None:intergenic 60.0%
CGTTCTTTCCCTCCGCCGTA+AGG - chr6_2:78546122-78546141 Msa0929710:CDS 60.0%
AGAGCATGGCGACCTTACGG+CGG + chr6_2:78546137-78546156 None:intergenic 60.0%
! CTCACCCGAGGTTTTGCTGC+TGG - chr6_2:78546368-78546387 Msa0929710:CDS 60.0%
CTCACCATCCCATGGCAAGG+AGG - chr6_2:78546589-78546608 Msa0929710:CDS 60.0%
!! GTTGACTTGCCGCTGCCACT+AGG + chr6_2:78546021-78546040 None:intergenic 60.0%
TGGCTCCCAGAGGCGATTCA+AGG + chr6_2:78546055-78546074 None:intergenic 60.0%
AGGAGGAAGATGGCTCCCAG+AGG + chr6_2:78546065-78546084 None:intergenic 60.0%
TCCTCCTCCGTCTTCCTCGA+TGG - chr6_2:78546078-78546097 Msa0929710:CDS 60.0%
TACGCCATCGAGGAAGACGG+AGG + chr6_2:78546085-78546104 None:intergenic 60.0%
GGCGGAGGGAAAGAACGTCA+AGG + chr6_2:78546119-78546138 None:intergenic 60.0%
CGTTCTTTCCCTCCGCCGTA+AGG - chr6_2:78546122-78546141 Msa0929710:CDS 60.0%
AGAGCATGGCGACCTTACGG+CGG + chr6_2:78546137-78546156 None:intergenic 60.0%
! CTCACCCGAGGTTTTGCTGC+TGG - chr6_2:78546368-78546387 Msa0929710:CDS 60.0%
CTCACCATCCCATGGCAAGG+AGG - chr6_2:78546589-78546608 Msa0929710:CDS 60.0%
GCCATCGAGGAAGACGGAGG+AGG + chr6_2:78546082-78546101 None:intergenic 65.0%
CATGGCGACCTTACGGCGGA+GGG + chr6_2:78546133-78546152 None:intergenic 65.0%
GCCATCGAGGAAGACGGAGG+AGG + chr6_2:78546082-78546101 None:intergenic 65.0%
CATGGCGACCTTACGGCGGA+GGG + chr6_2:78546133-78546152 None:intergenic 65.0%
GCATGGCGACCTTACGGCGG+AGG + chr6_2:78546134-78546153 None:intergenic 70.0%
GCATGGCGACCTTACGGCGG+AGG + chr6_2:78546134-78546153 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 78545556 78546806 78545556 ID=Msa0929710;Name=Msa0929710
chr6_2 mRNA 78545556 78546806 78545556 ID=Msa0929710-mRNA-1;Parent=Msa0929710;Name=Msa0929710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=86|1|1|1|0|0.5|2|174|301
chr6_2 exon 78545556 78546493 78545556 ID=Msa0929710-mRNA-1:exon:13187;Parent=Msa0929710-mRNA-1
chr6_2 exon 78546579 78546806 78546579 ID=Msa0929710-mRNA-1:exon:13186;Parent=Msa0929710-mRNA-1
chr6_2 five_prime_UTR 78546721 78546806 78546721 ID=Msa0929710-mRNA-1:five_prime_utr;Parent=Msa0929710-mRNA-1
chr6_2 CDS 78546579 78546720 78546579 ID=Msa0929710-mRNA-1:cds;Parent=Msa0929710-mRNA-1
chr6_2 CDS 78545730 78546493 78545730 ID=Msa0929710-mRNA-1:cds;Parent=Msa0929710-mRNA-1
chr6_2 three_prime_UTR 78545556 78545729 78545556 ID=Msa0929710-mRNA-1:three_prime_utr;Parent=Msa0929710-mRNA-1
Gene Sequence

>Msa0929710

ATGACCGGGGAAGGTTGTTTGTGGTGTGGCTCTTTGGTTTCACATAAAAAATTCATATTCCTATATTCATATGGTCACCATACAATAATACATTCTCATTCTCTCAATCACACGCCCAACCCAATTATGTCTTCCGTCTTAGAGCACTTGTTGTTGGATGTGGAGGAGCAGCAGCAACAACCGAAAATCAAGATAAAAAATCTGAGAAAAGAATCGGATGATGGGAAGCTTGAAATACTGAAAGGCATCAGCGTTGACATCCCAAAAGGTATGGTTGTTGGGATCATAGGTCCTAGTGGCAGCGGCAAGTCAACCCTCTTAAGGGCCTTGAATCGCCTCTGGGAGCCATCTTCCTCCTCCGTCTTCCTCGATGGCGTAGACATATGTAACCTTGACGTTCTTTCCCTCCGCCGTAAGGTCGCCATGCTCTTTCAGCTCCCTGCTCTCTTTGAAGGGACAGTTGCGGACAACGTGAGATATGGTCCACAACTGAGGGGAATAAAGCTAACGGACGATGAGGTGGGGAAGTTGCTTTTAATGGCGGATCTAGATTCTTCTTCTACTAATTTCAAGGATAAGTCAGGTGCTGACCTCTCTGTTGGTCAGGCTCAAAGAGTTGCACTTGCCAGGACTCTAGCTAACTCACCCGAGGTTTTGCTGCTGGATGAGCCTACTAGTGCATTAGATCCAATATCCACAGAAAACATTGAAGGTGCCCTCATGAAGTTGAACAAGAATCAGGGCATCACACTCATCATGGTTTCTCATAGCATCAAGCAAATACAGAGGATGGCTGATCTAGTGTGCTTGGTTGTTGATGGTCAAATTGTTGAAGTTCTTAAGCCTAATCAACTCTCTCAAGCTCACCATCCCATGGCAAGGAGGTTTCTTGAACTCAGTTCTTAA
Protein sequence

>Msa0929710

MTGEGCLWCGSLVSHKKFIFLYSYGHHTIIHSHSLNHTPNPIMSSVLEHLLLDVEEQQQQPKIKIKNLRKESDDGKLEILKGISVDIPKGMVVGIIGPSGSGKSTLLRALNRLWEPSSSSVFLDGVDICNLDVLSLRRKVAMLFQLPALFEGTVADNVRYGPQLRGIKLTDDEVGKLLLMADLDSSSTNFKDKSGADLSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEGALMKLNKNQGITLIMVSHSIKQIQRMADLVCLVVDGQIVEVLKPNQLSQAHHPMARRFLELSS*