AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 41 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGAACCTACAATAAATT+TGG 0.242644 tig0016345:+35759 None:intergenic
AATCACAATTGTAAATAATT+AGG 0.257693 tig0016345:-33560 Msa1358540:three_prime_UTR
AGTATATGTGAAAACAATAT+TGG 0.277573 tig0016345:-33430 Msa1358540:three_prime_UTR
TGGTAATATTTGTCCATATT+GGG 0.282086 tig0016345:-33735 Msa1358540:CDS
TGAAGATGGTCAGTTGTATA+TGG 0.293940 tig0016345:-33627 Msa1358540:three_prime_UTR
ATTCTTTAGGCAACCCAATA+TGG 0.309483 tig0016345:+33722 None:intergenic
TAGGTGTTTATACAAATTAT+TGG 0.309564 tig0016345:-33541 Msa1358540:three_prime_UTR
TTGGTAATATTTGTCCATAT+TGG 0.311792 tig0016345:-33736 Msa1358540:CDS
AAACTGAAGTTGGTTTCATT+AGG 0.366193 tig0016345:-33495 Msa1358540:three_prime_UTR
AGAGAGAGTGGTGGTAGGTT+TGG 0.386635 tig0016345:+36797 None:intergenic
TTATTAATGAAAACTGAAGT+TGG 0.406369 tig0016345:-33505 Msa1358540:three_prime_UTR
TGGTGGTAGGTTTGGTTGTG+AGG 0.433839 tig0016345:+36805 None:intergenic
CGACGTTTCAAAGCATCATC+AGG 0.447392 tig0016345:-36551 Msa1358540:intron
CGTGAGAGAGAAAGAGAATG+AGG 0.449011 tig0016345:+36772 None:intergenic
GAGAATGAGGGAAGAGAGAG+TGG 0.454177 tig0016345:+36785 None:intergenic
GAATGTATAAATGAATTAGT+TGG 0.455497 tig0016345:+36627 None:intergenic
GATAACAACCAAAACAAAAC+AGG 0.457405 tig0016345:-33673 Msa1358540:three_prime_UTR
ACAGACTCATGAGATTCTTT+AGG 0.457748 tig0016345:+33709 None:intergenic
ATATATGTTCACTCAAGGTT+TGG 0.459413 tig0016345:-33755 Msa1358540:CDS
CTTATTGAAGGGATAATACT+AGG 0.484084 tig0016345:-33374 None:intergenic
GGTGGTAGGTTTGGTTGTGA+GGG 0.485295 tig0016345:+36806 None:intergenic
CTGCTAACATGAGCAGCATT+CGG 0.491082 tig0016345:-35804 Msa1358540:CDS
AATTCCGACGCGGTGGTCAA+TGG 0.496352 tig0016345:+36581 None:intergenic
GGATGAAGAGAGGAAGATGA+TGG 0.529212 tig0016345:+36659 None:intergenic
AGAGAATATATGTTCACTCA+AGG 0.533933 tig0016345:-33760 Msa1358540:CDS
GTGAGAGAGAAAGAGAATGA+GGG 0.546907 tig0016345:+36773 None:intergenic
CGTACAAGAAGTGTGCGTCC+TGG 0.549349 tig0016345:+36395 None:intergenic
GCATAATGAAAGAATGAGCC+AGG 0.551370 tig0016345:-36413 Msa1358540:exon
AGGGAAGAGAGAGTGGTGGT+AGG 0.554495 tig0016345:+36792 None:intergenic
GGTGGTCTCAAAATTGAACT+TGG 0.556174 tig0016345:+36602 None:intergenic
CAGGACGCACACTTCTTGTA+CGG 0.559296 tig0016345:-36394 Msa1358540:CDS
TGGTTGTGAGGGATAAAATG+AGG 0.560893 tig0016345:+36817 None:intergenic
TGAAGAGAGGAAGATGATGG+TGG 0.578560 tig0016345:+36662 None:intergenic
CTGATGATGCTTTGAAACGT+CGG 0.595597 tig0016345:+36552 None:intergenic
AATGAGGGAAGAGAGAGTGG+TGG 0.600251 tig0016345:+36788 None:intergenic
AAAATGAAGAAAGAAGGTAG+AGG 0.605112 tig0016345:+36719 None:intergenic
TCCGACGCGGTGGTCAATGG+TGG 0.610146 tig0016345:+36584 None:intergenic
GACGCACACTTCTTGTACGG+AGG 0.632791 tig0016345:-36391 Msa1358540:intron
ACCACCATTGACCACCGCGT+CGG 0.649259 tig0016345:-36585 Msa1358540:five_prime_UTR
GAGAGCGAATTCCGACGCGG+TGG 0.690172 tig0016345:+36574 None:intergenic
TCGGAGAGCGAATTCCGACG+CGG 0.766054 tig0016345:+36571 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAATACCAAATAAAAT+TGG + tig0016345:33892-33911 None:intergenic 10.0%
!! AATATAAAAGCTATTATAAA+AGG + tig0016345:34143-34162 None:intergenic 10.0%
!! ATAAATCTGAAAATGAAAAA+TGG + tig0016345:33838-33857 None:intergenic 15.0%
!! ACAAATAAGAAAAGTTAAAA+GGG + tig0016345:33952-33971 None:intergenic 15.0%
!! TACAAATAAGAAAAGTTAAA+AGG + tig0016345:33953-33972 None:intergenic 15.0%
!!! AATTCAATTATTTTATTTGC+AGG - tig0016345:34347-34366 Msa1358540:intron 15.0%
!! GATTTAATAGAAACAATTAA+TGG + tig0016345:34473-34492 None:intergenic 15.0%
!!! GATTGTTAATCTATTTTTTT+GGG - tig0016345:35113-35132 Msa1358540:intron 15.0%
!! TAATTTATCTTTGCATAATA+AGG - tig0016345:35212-35231 Msa1358540:intron 15.0%
!!! TTATTATAATCACATCTTTT+AGG - tig0016345:35552-35571 Msa1358540:intron 15.0%
!!! TATTTAGTATTTTCTCTTTT+TGG - tig0016345:36229-36248 Msa1358540:intron 15.0%
!!! ATTTAGTATTTTCTCTTTTT+GGG - tig0016345:36230-36249 Msa1358540:intron 15.0%
!! AATCACAATTGTAAATAATT+AGG - tig0016345:36632-36651 Msa1358540:five_prime_UTR 15.0%
!!! AATTTTGTTAATCTTATTGA+AGG - tig0016345:36806-36825 Msa1358540:five_prime_UTR 15.0%
!!! ATTTTGTTAATCTTATTGAA+GGG - tig0016345:36807-36826 Msa1358540:five_prime_UTR 15.0%
!!! TCTTCATTTTTGATCAATTT+CGG - tig0016345:33486-33505 Msa1358540:three_prime_UTR 20.0%
!! GAATGTATAAATGAATTAGT+TGG + tig0016345:33568-33587 None:intergenic 20.0%
!! TCTCAAAATGCAAAATATAA+TGG + tig0016345:33865-33884 None:intergenic 20.0%
!! AAATACCAAATAAAATTGGT+TGG + tig0016345:33888-33907 None:intergenic 20.0%
!! TAATAGAAACAATTAATGGA+AGG + tig0016345:34469-34488 None:intergenic 20.0%
!! ACAAATAATGACAATCAAAT+GGG + tig0016345:34511-34530 None:intergenic 20.0%
!! TACAAATAATGACAATCAAA+TGG + tig0016345:34512-34531 None:intergenic 20.0%
!!! TGTTATTGATGTTAATTTGA+TGG - tig0016345:34586-34605 Msa1358540:intron 20.0%
!! TTTGAATAACAAAATGATAG+TGG + tig0016345:34724-34743 None:intergenic 20.0%
!!! GGATTGTTAATCTATTTTTT+TGG - tig0016345:35112-35131 Msa1358540:intron 20.0%
!!! TAGCTATAACTTTCTATTTT+TGG - tig0016345:35147-35166 Msa1358540:intron 20.0%
!!! TCTATTATTTCTTAGATGTA+TGG - tig0016345:35250-35269 Msa1358540:intron 20.0%
!!! AAAATTTAGAGTGTATAGAA+TGG - tig0016345:35276-35295 Msa1358540:intron 20.0%
!!! CTACTAATAACTACTATTTT+TGG + tig0016345:35347-35366 None:intergenic 20.0%
!! TTTGAATTTCAAAATGATAG+TGG + tig0016345:35805-35824 None:intergenic 20.0%
!!! ATACTTTTGACATAAAATCA+TGG + tig0016345:36292-36311 None:intergenic 20.0%
!! TAGGTGTTTATACAAATTAT+TGG - tig0016345:36651-36670 Msa1358540:five_prime_UTR 20.0%
!! TTATTAATGAAAACTGAAGT+TGG - tig0016345:36687-36706 Msa1358540:five_prime_UTR 20.0%
!! AGTATATGTGAAAACAATAT+TGG - tig0016345:36762-36781 Msa1358540:five_prime_UTR 20.0%
! TGATCAAAAATGAAGAAAGA+AGG + tig0016345:33482-33501 None:intergenic 25.0%
! ACTATTAACAGATCGAAAAT+GGG + tig0016345:33699-33718 None:intergenic 25.0%
! TACTATTAACAGATCGAAAA+TGG + tig0016345:33700-33719 None:intergenic 25.0%
!!! GTGTTTGTAGTTTTGAATTT+TGG - tig0016345:33749-33768 Msa1358540:CDS 25.0%
! AATCTCATATTTCTTGATTC+TGG - tig0016345:34078-34097 Msa1358540:intron 25.0%
! ATTTAATTGTGATGAGTTTG+TGG - tig0016345:34202-34221 Msa1358540:intron 25.0%
!!! TCAATTATTTTATTTGCAGG+CGG - tig0016345:34350-34369 Msa1358540:intron 25.0%
! AGTTCTTCCAAATTTATTGT+AGG - tig0016345:34426-34445 Msa1358540:intron 25.0%
! CAAATAATGACAATCAAATG+GGG + tig0016345:34510-34529 None:intergenic 25.0%
!!! TTGAAATTTGAAAGTGTTAG+TGG + tig0016345:34692-34711 None:intergenic 25.0%
!!! AATAACAAAATGATAGTGGA+GGG + tig0016345:34720-34739 None:intergenic 25.0%
! TCAAACAAATATCCACTAAA+AGG - tig0016345:34739-34758 Msa1358540:intron 25.0%
! AACCTCAAAATTAAAGTACA+GGG + tig0016345:34904-34923 None:intergenic 25.0%
! AAACCTCAAAATTAAAGTAC+AGG + tig0016345:34905-34924 None:intergenic 25.0%
!!! TTTTGAGGTTTAAAGACATA+TGG - tig0016345:34914-34933 Msa1358540:intron 25.0%
! AAATAACATGCAAACAATTC+AGG + tig0016345:34984-35003 None:intergenic 25.0%
! GTAGTATATTAGATCAATCT+AGG - tig0016345:35023-35042 Msa1358540:intron 25.0%
!! GCATAAGCAATTTTCTAAAT+TGG + tig0016345:35067-35086 None:intergenic 25.0%
!!! ATCTATTTTTTTGGGTGTTT+TGG - tig0016345:35121-35140 Msa1358540:intron 25.0%
! CTTTGCATAATAAGGTAAAT+TGG - tig0016345:35220-35239 Msa1358540:intron 25.0%
! AATTATATTCCTCTTGAACA+TGG - tig0016345:35418-35437 Msa1358540:intron 25.0%
! ATATCACACAGAAAACAAAA+GGG - tig0016345:35874-35893 Msa1358540:intron 25.0%
! AAAACAAAAGGGACAATAAT+GGG - tig0016345:35885-35904 Msa1358540:intron 25.0%
!!! TAAAAGTATTGGAAAAGACA+TGG + tig0016345:35921-35940 None:intergenic 25.0%
! TACTACAAATAGACAAACAT+GGG + tig0016345:35948-35967 None:intergenic 25.0%
! ATACTACAAATAGACAAACA+TGG + tig0016345:35949-35968 None:intergenic 25.0%
!!! TTTAGATTTACATGTCGTTT+TGG - tig0016345:36118-36137 Msa1358540:intron 25.0%
! TTCAAAGAAATCTTTAGCTA+AGG + tig0016345:36269-36288 None:intergenic 25.0%
! TCAAGAAGACTTGAATAATT+AGG + tig0016345:36326-36345 None:intergenic 25.0%
!! TTGGTAATATTTGTCCATAT+TGG - tig0016345:36456-36475 Msa1358540:intron 25.0%
! TGGTAATATTTGTCCATATT+GGG - tig0016345:36457-36476 Msa1358540:intron 25.0%
AAAATGAAGAAAGAAGGTAG+AGG + tig0016345:33476-33495 None:intergenic 30.0%
!!! TGAATTAGTTGGTTTTGTAG+AGG + tig0016345:33557-33576 None:intergenic 30.0%
! AGATCGAAAATGGGTATTTT+CGG + tig0016345:33690-33709 None:intergenic 30.0%
! TGAGACCAACCAATTTTATT+TGG - tig0016345:33880-33899 Msa1358540:intron 30.0%
! ACATTGCGATTTTATGCTTT+TGG - tig0016345:34027-34046 Msa1358540:intron 30.0%
AGAAATATGAGATTAGAGAG+AGG + tig0016345:34072-34091 None:intergenic 30.0%
! CATATTTCTTGATTCTGGAA+TGG - tig0016345:34083-34102 Msa1358540:intron 30.0%
CTCAATAGTATCACATAACT+TGG + tig0016345:34305-34324 None:intergenic 30.0%
GGAAGAACCTACAATAAATT+TGG + tig0016345:34436-34455 None:intergenic 30.0%
TTATTGTAGGTTCTTCCATT+TGG - tig0016345:34439-34458 Msa1358540:intron 30.0%
!! GAATAACAAAATGATAGTGG+AGG + tig0016345:34721-34740 None:intergenic 30.0%
! TTTGAAATTTGCATGTGTCT+TGG + tig0016345:34877-34896 None:intergenic 30.0%
!! TTCCCTGTACTTTAATTTTG+AGG - tig0016345:34899-34918 Msa1358540:intron 30.0%
TTCAGGAGAAAATACAGAAA+AGG + tig0016345:34967-34986 None:intergenic 30.0%
! TCAGTGCAATTTATTTGTTG+TGG - tig0016345:35091-35110 Msa1358540:intron 30.0%
TTTCATTGAGAGAAACAAAG+TGG + tig0016345:35400-35419 None:intergenic 30.0%
TGAAGATTCTGTTAAGAAGA+AGG + tig0016345:35526-35545 None:intergenic 30.0%
CTCATAAAATGGAAACAACT+TGG + tig0016345:35627-35646 None:intergenic 30.0%
CATTCGTTCTTCTCATAAAA+TGG + tig0016345:35638-35657 None:intergenic 30.0%
! TTTTATGAGAAGAACGAATG+CGG - tig0016345:35638-35657 Msa1358540:intron 30.0%
CATATCACACAGAAAACAAA+AGG - tig0016345:35873-35892 Msa1358540:intron 30.0%
GAAAACAAAAGGGACAATAA+TGG - tig0016345:35884-35903 Msa1358540:intron 30.0%
! ACATGGGAATGTAAAAGTAT+TGG + tig0016345:35932-35951 None:intergenic 30.0%
TTGAATTAAGTCTCCTGTTA+CGG - tig0016345:36048-36067 Msa1358540:intron 30.0%
AGAGAATATATGTTCACTCA+AGG - tig0016345:36432-36451 Msa1358540:five_prime_UTR 30.0%
ATATATGTTCACTCAAGGTT+TGG - tig0016345:36437-36456 Msa1358540:intron 30.0%
GATAACAACCAAAACAAAAC+AGG - tig0016345:36519-36538 Msa1358540:intron 30.0%
!! TGTGATGTTTCTTTTGAAGA+TGG - tig0016345:36551-36570 Msa1358540:intron 30.0%
! AAACTGAAGTTGGTTTCATT+AGG - tig0016345:36697-36716 Msa1358540:five_prime_UTR 30.0%
GAAAGAAGGTAGAGGAAAAA+TGG + tig0016345:33468-33487 None:intergenic 35.0%
! TTGCGATTTTATGCTTTTGG+TGG - tig0016345:34030-34049 Msa1358540:intron 35.0%
!! AACACTTGCTATAGTGAACA+TGG - tig0016345:34237-34256 Msa1358540:intron 35.0%
TATAGTGAACATGGTACTCA+TGG - tig0016345:34246-34265 Msa1358540:intron 35.0%
TTAATGGAAGGAACACCAAA+TGG + tig0016345:34457-34476 None:intergenic 35.0%
ACAAATATCCACTAAAAGGC+AGG - tig0016345:34743-34762 Msa1358540:intron 35.0%
! GTGCAAGTCAGTTTTCATTA+TGG + tig0016345:34805-34824 None:intergenic 35.0%
!! AAGTTAGCTTGCTGTTCTAT+TGG - tig0016345:35303-35322 Msa1358540:intron 35.0%
AGAGAAACAAAGTGGCAAAA+TGG + tig0016345:35392-35411 None:intergenic 35.0%
AAACTGAAACCATGTTCAAG+AGG + tig0016345:35430-35449 None:intergenic 35.0%
TTCAGTTTCTGCATAACATG+TGG - tig0016345:35442-35461 Msa1358540:intron 35.0%
!! CTATTTTGGATACTGGCATT+TGG - tig0016345:36071-36090 Msa1358540:intron 35.0%
ATTCTTTAGGCAACCCAATA+TGG + tig0016345:36473-36492 None:intergenic 35.0%
ACAGACTCATGAGATTCTTT+AGG + tig0016345:36486-36505 None:intergenic 35.0%
TGAAGATGGTCAGTTGTATA+TGG - tig0016345:36565-36584 Msa1358540:five_prime_UTR 35.0%
! GTTTCATTAGGATTTTGCTC+AGG - tig0016345:36709-36728 Msa1358540:five_prime_UTR 35.0%
GTGAGAGAGAAAGAGAATGA+GGG + tig0016345:33422-33441 None:intergenic 40.0%
AGAAGGTAGAGGAAAAATGG+TGG + tig0016345:33465-33484 None:intergenic 40.0%
!! GATGGTGGCTTTCTTTTAGT+GGG + tig0016345:33518-33537 None:intergenic 40.0%
!!! TGATGGTGGCTTTCTTTTAG+TGG + tig0016345:33519-33538 None:intergenic 40.0%
! GTTTTGTAGAGGATGAAGAG+AGG + tig0016345:33546-33565 None:intergenic 40.0%
GGTGGTCTCAAAATTGAACT+TGG + tig0016345:33593-33612 None:intergenic 40.0%
!! CTGATGATGCTTTGAAACGT+CGG + tig0016345:33643-33662 None:intergenic 40.0%
GCATAATGAAAGAATGAGCC+AGG - tig0016345:33779-33798 Msa1358540:intron 40.0%
!! ATGCTTTTGGTGGTCTTCAA+TGG - tig0016345:34040-34059 Msa1358540:intron 40.0%
!! TGCTTTTGGTGGTCTTCAAT+GGG - tig0016345:34041-34060 Msa1358540:intron 40.0%
!! ATTCTGGAATGGTTCACTGT+TGG - tig0016345:34094-34113 Msa1358540:intron 40.0%
GCTAAACATGCAGTCATTGT+AGG - tig0016345:35169-35188 Msa1358540:intron 40.0%
! TGCTGTTCTATTGGTTAGCA+CGG - tig0016345:35312-35331 Msa1358540:intron 40.0%
GTATCCAAAATAGCCGTAAC+AGG + tig0016345:36064-36083 None:intergenic 40.0%
!! GTTACGGCTATTTTGGATAC+TGG - tig0016345:36064-36083 Msa1358540:intron 40.0%
!!! GTGTTGCACCTGTTTTGTTT+TGG + tig0016345:36530-36549 None:intergenic 40.0%
! TCATTAGGATTTTGCTCAGG+AGG - tig0016345:36712-36731 Msa1358540:five_prime_UTR 40.0%
! CATTAGGATTTTGCTCAGGA+GGG - tig0016345:36713-36732 Msa1358540:five_prime_UTR 40.0%
! ATTAGGATTTTGCTCAGGAG+GGG - tig0016345:36714-36733 Msa1358540:five_prime_UTR 40.0%
CGTGAGAGAGAAAGAGAATG+AGG + tig0016345:33423-33442 None:intergenic 45.0%
! TGAAGAGAGGAAGATGATGG+TGG + tig0016345:33533-33552 None:intergenic 45.0%
GGATGAAGAGAGGAAGATGA+TGG + tig0016345:33536-33555 None:intergenic 45.0%
! CGACGTTTCAAAGCATCATC+AGG - tig0016345:33641-33660 Msa1358540:three_prime_UTR 45.0%
GAACATGGTACTCATGGAAG+AGG - tig0016345:34252-34271 Msa1358540:intron 45.0%
CTGCTAACATGAGCAGCATT+CGG - tig0016345:34388-34407 Msa1358540:intron 45.0%
! TAAGTCAGCCTGCCTTTTAG+TGG + tig0016345:34754-34773 None:intergenic 45.0%
! TGTGTCAGCGTGTCTTTTAG+TGG + tig0016345:35835-35854 None:intergenic 45.0%
! GTCTCCTGTTACGGCTATTT+TGG - tig0016345:36057-36076 Msa1358540:intron 45.0%
! GGTGGTAGGTTTGGTTGTGA+GGG + tig0016345:33389-33408 None:intergenic 50.0%
! TGGTGGTAGGTTTGGTTGTG+AGG + tig0016345:33390-33409 None:intergenic 50.0%
AGAGAGAGTGGTGGTAGGTT+TGG + tig0016345:33398-33417 None:intergenic 50.0%
AATGAGGGAAGAGAGAGTGG+TGG + tig0016345:33407-33426 None:intergenic 50.0%
GAGAATGAGGGAAGAGAGAG+TGG + tig0016345:33410-33429 None:intergenic 50.0%
! GGCTTTCTTTTAGTGGGAGG+AGG + tig0016345:33512-33531 None:intergenic 50.0%
! GGTGGCTTTCTTTTAGTGGG+AGG + tig0016345:33515-33534 None:intergenic 50.0%
CAGGACGCACACTTCTTGTA+CGG - tig0016345:33798-33817 Msa1358540:intron 50.0%
AGGGAAGAGAGAGTGGTGGT+AGG + tig0016345:33403-33422 None:intergenic 55.0%
AATTCCGACGCGGTGGTCAA+TGG + tig0016345:33614-33633 None:intergenic 55.0%
! CGTACAAGAAGTGTGCGTCC+TGG + tig0016345:33800-33819 None:intergenic 55.0%
GACGCACACTTCTTGTACGG+AGG - tig0016345:33801-33820 Msa1358540:intron 55.0%
ACCACCATTGACCACCGCGT+CGG - tig0016345:33607-33626 Msa1358540:three_prime_UTR 60.0%
TCGGAGAGCGAATTCCGACG+CGG + tig0016345:33624-33643 None:intergenic 60.0%
TCCGACGCGGTGGTCAATGG+TGG + tig0016345:33611-33630 None:intergenic 65.0%
GAGAGCGAATTCCGACGCGG+TGG + tig0016345:33621-33640 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0016345 gene 33376 36838 33376 ID=Msa1358540;Name=Msa1358540
tig0016345 mRNA 33376 36838 33376 ID=Msa1358540-mRNA-1;Parent=Msa1358540;Name=Msa1358540-mRNA-1;_AED=0.16;_eAED=0.16;_QI=320|0.75|0.6|1|0|0|5|326|79
tig0016345 exon 33376 33794 33376 ID=Msa1358540-mRNA-1:exon:10906;Parent=Msa1358540-mRNA-1
tig0016345 exon 35771 35845 35771 ID=Msa1358540-mRNA-1:exon:10905;Parent=Msa1358540-mRNA-1
tig0016345 exon 36152 36192 36152 ID=Msa1358540-mRNA-1:exon:10904;Parent=Msa1358540-mRNA-1
tig0016345 exon 36392 36455 36392 ID=Msa1358540-mRNA-1:exon:10903;Parent=Msa1358540-mRNA-1
tig0016345 exon 36552 36838 36552 ID=Msa1358540-mRNA-1:exon:10902;Parent=Msa1358540-mRNA-1
tig0016345 five_prime_UTR 36552 36838 36552 ID=Msa1358540-mRNA-1:five_prime_utr;Parent=Msa1358540-mRNA-1
tig0016345 five_prime_UTR 36423 36455 36423 ID=Msa1358540-mRNA-1:five_prime_utr;Parent=Msa1358540-mRNA-1
tig0016345 CDS 36392 36422 36392 ID=Msa1358540-mRNA-1:cds;Parent=Msa1358540-mRNA-1
tig0016345 CDS 36152 36192 36152 ID=Msa1358540-mRNA-1:cds;Parent=Msa1358540-mRNA-1
tig0016345 CDS 35771 35845 35771 ID=Msa1358540-mRNA-1:cds;Parent=Msa1358540-mRNA-1
tig0016345 CDS 33702 33794 33702 ID=Msa1358540-mRNA-1:cds;Parent=Msa1358540-mRNA-1
tig0016345 three_prime_UTR 33376 33701 33376 ID=Msa1358540-mRNA-1:three_prime_utr;Parent=Msa1358540-mRNA-1
Gene Sequence

>Msa1358540

ATGAGCCAGGACGCACACTTCTTGTACGGAGCAATAACATTGCGATTTTATGCTTTTGGTGGTCTTCAATGGGCGGTTGATTTTATCTCTACTGCTAACATGAGCAGCATTCGGTTGTTATTATTTGTAAGTTCTTCCAAATTTATTATTTTCATGATTAGAGAATATATGTTCACTCAAGGTTTGGTAATATTTGTCCATATTGGGTTGCCTAAAGAATCTCATGAGTCTGTGCTTTAG
Protein sequence

>Msa1358540

MSQDAHFLYGAITLRFYAFGGLQWAVDFISTANMSSIRLLLFVSSSKFIIFMIREYMFTQGLVIFVHIGLPKESHESVL*